BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020640
MISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKR
MPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETP
MVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMK
DVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVEEIGD
LGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTA
RAKRKATGILERLKRTVNLTHTA

High Scoring Gene Products

Symbol, full name Information P value
PUB9
plant U-box 9
protein from Arabidopsis thaliana 1.4e-103
AT5G18320 protein from Arabidopsis thaliana 1.7e-59
PUB14
AT3G54850
protein from Arabidopsis thaliana 1.3e-50
PUB12
U-box domain-containing protein 12
protein from Oryza sativa Japonica Group 9.5e-50
AT5G18340 protein from Arabidopsis thaliana 1.6e-45
AT1G23030 protein from Arabidopsis thaliana 2.1e-45
SPL11
E3 ubiquitin-protein ligase SPL11
protein from Oryza sativa Japonica Group 3.8e-45
AT5G18330 protein from Arabidopsis thaliana 6.4e-44
PUB13
plant U-box 13
protein from Arabidopsis thaliana 1.9e-43
AT1G71020 protein from Arabidopsis thaliana 3.2e-42
PUB15
Plant U-Box 15
protein from Arabidopsis thaliana 3.8e-38
AT5G67340 protein from Arabidopsis thaliana 1.2e-37
PUB4
plant U-box 4
protein from Arabidopsis thaliana 6.7e-37
AT3G01400 protein from Arabidopsis thaliana 3.1e-35
AT5G58680 protein from Arabidopsis thaliana 2.0e-33
AT4G16490 protein from Arabidopsis thaliana 4.9e-30
PUB17
AT1G29340
protein from Arabidopsis thaliana 2.8e-27
AT5G40140 protein from Arabidopsis thaliana 1.8e-24
PUB4
U-box domain-containing protein 4
protein from Oryza sativa Japonica Group 2.1e-23
PUB38
plant U-box 38
protein from Arabidopsis thaliana 4.2e-22
SAUR21
AT5G01830
protein from Arabidopsis thaliana 6.9e-21
AT3G03440 protein from Arabidopsis thaliana 2.8e-16
PUB8
plant U-box 8
protein from Arabidopsis thaliana 1.7e-15
AT4G12710 protein from Arabidopsis thaliana 5.5e-14
PUB19
plant U-box 19
protein from Arabidopsis thaliana 2.6e-12
AT1G67530 protein from Arabidopsis thaliana 1.0e-10
PUB18
AT1G10560
protein from Arabidopsis thaliana 3.2e-10
AT1G24330 protein from Arabidopsis thaliana 8.6e-10
AT5G14510 protein from Arabidopsis thaliana 9.6e-10
AT1G08315 protein from Arabidopsis thaliana 1.3e-09
PUB26
plant U-box 26
protein from Arabidopsis thaliana 3.1e-09
AT4G31890 protein from Arabidopsis thaliana 3.6e-09
PUB73
U-box domain-containing protein 73
protein from Oryza sativa Japonica Group 2.1e-08
VAC8
Phosphorylated and palmitoylated vacuolar membrane protein
gene from Saccharomyces cerevisiae 5.8e-08
PUB25
plant U-box 25
protein from Arabidopsis thaliana 2.1e-07
PUB45
plant U-box 45
protein from Arabidopsis thaliana 2.5e-07
VAC8 gene_product from Candida albicans 1.7e-06
VAC8
Vacuolar protein 8
protein from Candida albicans SC5314 1.7e-06
ARABIDILLO-2
AT3G60350
protein from Arabidopsis thaliana 3.2e-06
AT2G05810 protein from Arabidopsis thaliana 3.6e-06
ARABIDILLO-1
AT2G44900
protein from Arabidopsis thaliana 4.1e-06
AT1G01830 protein from Arabidopsis thaliana 4.6e-05
ANKAR
Ankyrin and armadillo repeat-containing protein
protein from Homo sapiens 5.3e-05
AT1G77460 protein from Arabidopsis thaliana 6.4e-05
AT5G50900 protein from Arabidopsis thaliana 7.4e-05
ARK2
AT1G01950
protein from Arabidopsis thaliana 0.00024
Ankar
ankyrin and armadillo repeat containing
protein from Mus musculus 0.00041
PUB23
plant U-box 23
protein from Arabidopsis thaliana 0.00079

The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020640
        (323 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:...  1026  1.4e-103  1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi...   610  1.7e-59   1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie...   526  1.3e-50   1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ...   518  9.5e-50   1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi...   478  1.6e-45   1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi...   477  2.1e-45   1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig...   476  3.8e-45   1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi...   463  6.4e-44   1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie...   459  1.9e-43   1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi...   447  3.2e-42   1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie...   413  3.8e-38   1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi...   410  1.2e-37   1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:...   386  6.7e-37   2
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi...   381  3.1e-35   1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species...   364  2.0e-33   1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi...   344  2.3e-30   1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species...   332  4.9e-30   1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie...   315  2.8e-27   1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi...   281  4.7e-26   2
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi...   286  1.8e-24   1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie...   257  9.7e-24   2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p...   279  2.1e-23   1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie...   246  4.2e-22   2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21...   255  6.9e-21   1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species...   220  2.8e-16   1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:...   213  1.7e-15   1
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi...   202  5.5e-14   1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie...   192  2.6e-12   1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi...   177  1.0e-10   2
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi...   175  1.2e-10   1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie...   174  3.2e-10   1
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi...   169  8.6e-10   2
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi...   164  9.6e-10   1
TAIR|locus:1005716696 - symbol:AT1G08315 species:3702 "Ar...   163  1.3e-09   1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie...   162  3.1e-09   1
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species...   163  3.6e-09   1
UNIPROTKB|Q6K762 - symbol:PUB73 "U-box domain-containing ...   157  2.1e-08   1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy...   153  5.8e-08   1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie...   146  2.1e-07   1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie...   149  2.5e-07   1
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme...   140  1.7e-06   1
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica...   140  1.7e-06   1
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci...   140  1.7e-06   1
TAIR|locus:2103351 - symbol:ARABIDILLO-2 "AT3G60350" spec...   140  3.2e-06   1
TAIR|locus:2056529 - symbol:AT2G05810 "AT2G05810" species...   137  3.6e-06   1
TAIR|locus:2055033 - symbol:ARABIDILLO-1 "AT2G44900" spec...   139  4.1e-06   1
POMBASE|SPBC354.14c - symbol:vac8 "vacuolar protein Vac8 ...   134  7.2e-06   1
TAIR|locus:2198235 - symbol:AT1G01830 "AT1G01830" species...   127  4.6e-05   1
UNIPROTKB|Q7Z5J8 - symbol:ANKAR "Ankyrin and armadillo re...   131  5.3e-05   1
TAIR|locus:2204700 - symbol:AT1G77460 "AT1G77460" species...   132  6.4e-05   1
TAIR|locus:2157358 - symbol:AT5G50900 species:3702 "Arabi...   125  7.4e-05   1
TAIR|locus:2025497 - symbol:ARK2 "armadillo repeat kinesi...   123  0.00024   1
MGI|MGI:2442559 - symbol:Ankar "ankyrin and armadillo rep...   123  0.00041   1
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie...   114  0.00079   1


>TAIR|locus:2079706 [details] [associations]
            symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0016567 "protein ubiquitination"
            evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0070696 "transmembrane receptor protein serine/threonine kinase
            binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
            acid stimulus" evidence=IMP] [GO:0046777 "protein
            autophosphorylation" evidence=RCA] InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
            UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
            Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
            EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
            IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
            ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
            PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
            KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
            InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
            ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
        Length = 460

 Score = 1026 (366.2 bits), Expect = 1.4e-103, P = 1.4e-103
 Identities = 212/330 (64%), Positives = 266/330 (80%)

Query:     1 MISQWCRSQGIELPNSVQ--YINE-EGITEADRDHFLSLLKKMSAT-LPDQTEAAKELRL 56
             MIS+WC+  G+E  +      +NE E +T +DR+ F SLL K+S++ L DQ  AAKELRL
Sbjct:   136 MISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKSAAKELRL 195

Query:    57 LTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPN--LQEDVITTLLNLSIHDN-NK 113
             LT++   FRALFGES D I +L++PL      +G NP+  LQEDV+TTLLN+SIHD+ NK
Sbjct:   196 LTRKGTEFRALFGESPDEITRLVNPLL-----HGSNPDEKLQEDVVTTLLNISIHDDSNK 250

Query:   114 KLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDE 173
             KLV E P VIPLL+DALR GT+ TRSNAAAA+FTLSALDSNK +IGKSG LKPLIDLL+E
Sbjct:   251 KLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEE 310

Query:   174 GHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHR 233
             G+  A+KDVA+AIF LCI HEN++RAVRDG V V+ KKI +G++VDELLAILAML T+ +
Sbjct:   311 GNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWK 370

Query:   234 AVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISK 293
             AVEE+G+LGGVS +L+I RES C RNKEN I ILHTIC SDRTKWK ++EEE+ HGTI+K
Sbjct:   371 AVEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITK 430

Query:   294 LAQDGTARAKRKATGILERLKRTVNLTHTA 323
             L+++GT+RA+RKA GIL+RL++ +NLTHTA
Sbjct:   431 LSREGTSRAQRKANGILDRLRKAMNLTHTA 460


>TAIR|locus:2146183 [details] [associations]
            symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
            evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
            PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
            GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
            IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
            ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
            EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
            TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
            PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
            Uniprot:Q3E9F7
        Length = 458

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 142/322 (44%), Positives = 205/322 (63%)

Query:     1 MISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSAT--LPDQTEAAKELRLLT 58
             +I+QWC     +     Q  ++E + E       +LL+++S++  + DQ EAAKELR  T
Sbjct:   133 LITQWCLVNKYDH----QKPSDELVAELFTSDIEALLQRVSSSSSVADQIEAAKELRHQT 188

Query:    59 KRMPSFRALFGES-HDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVA 117
             K+ P+ R  F    HD+I +LLSPLS        +  LQE+++T L NLSI ++NK ++A
Sbjct:   189 KKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILESNKTVIA 248

Query:   118 ETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQS 177
             E  +VIPLL  +L+ GT ETR NAAA L +LSA+DSNK +IG S A+K LIDL++EG   
Sbjct:   249 ENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIEEGDLL 308

Query:   178 AMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVEE 237
             A K+  S +FNLCI  ENK + V  G +    KKI  G +VDELL++LA++ST++RAVEE
Sbjct:   309 ATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDELLSLLALISTHNRAVEE 368

Query:   238 IGDLGGVSCMLRIIRESTCDRNKENCIAILHTIC--LSDRTKWKAMREEESTHGTISKLA 295
             +  LG +  +  I+R+ +     EN + I+  +     DR++ K + EEE+ HGT +KLA
Sbjct:   369 MDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSRLKVVGEEENQHGTFTKLA 428

Query:   296 QDGTARAKRKATGILERLKRTV 317
             + G+ RA RKA GIL+ +KR V
Sbjct:   429 KQGSVRAARKAQGILQWIKRFV 450


>TAIR|locus:2082682 [details] [associations]
            symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
            [GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
            ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
            evidence=IEA] [GO:0070696 "transmembrane receptor protein
            serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
            evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
            SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
            GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
            Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
            eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
            IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
            PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
            IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
            EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
            TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
            ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
            Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
        Length = 632

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 131/330 (39%), Positives = 188/330 (56%)

Query:     1 MISQWCRSQGIELPNS-----VQYINEEGITEADRDHFLSLLKKMS-ATLPDQTEAAKEL 54
             +I+ WC S GIELP +        I     ++ DR   LSLL+K++  T   Q  AA EL
Sbjct:   310 LIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGEL 369

Query:    55 RLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKK 114
             RLL KR    R    E+  AIP L+  LS        +P  QE  +T LLNLSI++ NK 
Sbjct:   370 RLLAKRNVDNRVCIAEA-GAIPLLVELLSSP------DPRTQEHSVTALLNLSINEGNKG 422

Query:   115 LVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEG 174
              + +   +  ++ + L++G++E R NAAA LF+LS +D NK  IG +GA++ LI LL+EG
Sbjct:   423 AIVDAGAITDIV-EVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEG 481

Query:   175 HQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHVDELLAILAMLSTNH 232
              +   KD A+AIFNLCI   NK+RAV+ G V  + + + D  G  VDE LAILA+LSTN 
Sbjct:   482 TRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQ 541

Query:   233 RAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTIS 292
                  I +   +  ++ IIR  +  RN+EN  AIL  +C+ +  +    RE       + 
Sbjct:   542 EGKTAIAEAESIPVLVEIIRTGS-PRNRENAAAILWYLCIGNIERLNVAREV-GADVALK 599

Query:   293 KLAQDGTARAKRKATGILERLKRTVNLTHT 322
             +L ++GT RAKRKA  +LE +++T  +  T
Sbjct:   600 ELTENGTDRAKRKAASLLELIQQTEGVAVT 629


>UNIPROTKB|Q5VRH9 [details] [associations]
            symbol:PUB12 "U-box domain-containing protein 12"
            species:39947 "Oryza sativa Japonica Group" [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
            "protein ubiquitination" evidence=IDA] InterPro:IPR000225
            InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
            PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
            HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
            RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
            EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
            Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
            Uniprot:Q5VRH9
        Length = 611

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 126/317 (39%), Positives = 190/317 (59%)

Query:     1 MISQWCRSQGIELPNSVQYINEEGITEA-DRDH--FLSLLKKM-SATLPDQTEAAKELRL 56
             +ISQWC + GIELP + Q   ++   ++ D DH   +SL+ ++ S    +Q  AA E+RL
Sbjct:   290 LISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEIRL 349

Query:    57 LTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLV 116
             L KR  + R    E+  AIP L++ LS S      +P  QE  +T LLNLSIH+NNK  +
Sbjct:   350 LAKRNVNNRICIAEA-GAIPLLVNLLSSS------DPRTQEHAVTALLNLSIHENNKASI 402

Query:   117 AETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQ 176
              ++   IP +++ L++G++ETR NAAA LF+LS +D NK  IG +GA+ PLI+LL +G  
Sbjct:   403 VDSH-AIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSP 461

Query:   177 SAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHVDELLAILAMLSTNHRA 234
                KD A+AIFNLCI   NK RAV+ G V  ++  ++D  G  +DE L++L++L+ N   
Sbjct:   462 RGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEG 521

Query:   235 VEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKL 294
                I     +  ++ +I+  +  RN+EN  AIL  +C +D T+     +       + +L
Sbjct:   522 KIVIARSEPIPPLVEVIKTGS-PRNRENAAAILWLLCSAD-TEQTLAAKAAGVEDALKEL 579

Query:   295 AQDGTARAKRKATGILE 311
             ++ GT RAKRKA+ ILE
Sbjct:   580 SETGTDRAKRKASSILE 596


>TAIR|locus:2146213 [details] [associations]
            symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
            evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
            PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
            GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
            ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
            UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
            EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
            TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
            PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
        Length = 456

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 119/319 (37%), Positives = 187/319 (58%)

Query:     1 MISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSA---TLPDQTEAAKELRLL 57
             +I++WC +   + P + +  + + +TE   D   SLL+++S+   ++ DQTEAAKEL L 
Sbjct:   135 LITRWCLANKYDRP-APKPSDIDYVTELFTDGIESLLQRISSPSSSVADQTEAAKELALQ 193

Query:    58 TKRMPSFRALF-GESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLV 116
             T++  + R  F  E  D+I +LL+PLS    E   NP LQE+++T L N+S  + NK ++
Sbjct:   194 TEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQENIVTALFNMSTFEKNKTVL 253

Query:   117 AETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDE-GH 175
             AE   VIPLL  +++ G++ TR NA   L +LS +DSNK +IG S ALK LIDL+ E   
Sbjct:   254 AENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIGNSVALKALIDLIGELDD 313

Query:   176 QSAMKDVASAIFNLCITH-ENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRA 234
              SA  D   A+ +LC    EN  +A+  G     +K I    ++ E LA LA++S + R 
Sbjct:   314 LSATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNIKARRNLFESLAALALISPHERV 373

Query:   235 VEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKW--KAMREEESTHGTIS 292
             ++E+ +LG +  +L I+R+++C    EN + I+  +    R +   K + EEE+ H T +
Sbjct:   374 IQEVANLGVIYDLLSILRKTSCMVTCENAVVIVGNMYAKSRERSIKKILAEEENQHKTFT 433

Query:   293 KLAQDGTARAKRKATGILE 311
             K+A  G+  A  KA GIL+
Sbjct:   434 KIATQGSVVAVMKAQGILQ 452


>TAIR|locus:2017719 [details] [associations]
            symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
            "protein ubiquitination" evidence=IEA] [GO:0010200 "response to
            chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
            SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
            GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
            HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
            EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
            RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
            ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
            EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
            TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
            PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
        Length = 612

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 122/319 (38%), Positives = 179/319 (56%)

Query:     1 MISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSA-TLPDQTEAAKELRLLTK 59
             +IS+WC    IE P    YIN       D     +L++++S+ +  D+  A  E+R L+K
Sbjct:   303 LISRWCAEHNIEQPAG--YINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSK 360

Query:    60 RMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAET 119
             R    R L  E+  AIP L++ L+            QE+ IT +LNLSI++NNK+L+   
Sbjct:   361 RSTDNRILIAEA-GAIPVLVNLLTSEDVAT------QENAITCVLNLSIYENNKELIMFA 413

Query:   120 PMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAM 179
               V  ++   LR+GT+E R NAAA LF+LS  D NK +IG SGA+  L+DLL+ G     
Sbjct:   414 GAVTSIVQ-VLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGK 472

Query:   180 KDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGV-H--VDELLAILAMLSTNHRAVE 236
             KD A+A+FNLCI H NK RAVR G V+ ++K + D   H  VDE L IL++L+ N  A  
Sbjct:   473 KDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKS 532

Query:   237 EIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQ 296
              I     +  ++ I++     RN+EN  AIL ++C  D  K   +    +    +  L++
Sbjct:   533 AIVKANTLPALIGILQTDQT-RNRENAAAILLSLCKRDTEKLITIGRLGAVV-PLMDLSK 590

Query:   297 DGTARAKRKATGILERLKR 315
             +GT R KRKA  +LE L++
Sbjct:   591 NGTERGKRKAISLLELLRK 609


>UNIPROTKB|Q0IMG9 [details] [associations]
            symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
            species:39947 "Oryza sativa Japonica Group" [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
            ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
            defense response" evidence=IMP] [GO:0043069 "negative regulation of
            programmed cell death" evidence=IMP] [GO:0048586 "regulation of
            long-day photoperiodism, flowering" evidence=IMP]
            InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
            Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
            SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
            GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
            EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
            EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
            UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
            GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
            KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
        Length = 694

 Score = 476 (172.6 bits), Expect = 3.8e-45, P = 3.8e-45
 Identities = 124/321 (38%), Positives = 179/321 (55%)

Query:     1 MISQWCRSQGIELPNSVQYINEE--GITEADRDHFLSLLKKM-SATLPDQTEAAKELRLL 57
             +ISQWC + G+E P      N+     + ++R +  +LL K+ S    +Q  AA ELRLL
Sbjct:   335 LISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRLL 394

Query:    58 TKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVA 117
              KR  + R    E+  AIP LLS LS S          QE  +T LLNLSIH++NK  + 
Sbjct:   395 AKRNANNRICIAEA-GAIPLLLSLLSSSDLRT------QEHAVTALLNLSIHEDNKASII 447

Query:   118 ETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQS 177
              +  V P ++  L++G++E R NAAA LF+LS +D  K  IG  GA+  L+ LL EG Q 
Sbjct:   448 SSGAV-PSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQR 506

Query:   178 AMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHVDELLAILAMLSTNHRAV 235
               KD A+A+FNLCI   NK RA+R G V +I+  + +  G  +DE +AIL++LS++    
Sbjct:   507 GKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGK 566

Query:   236 EEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEE-STHGTISKL 294
               IG    V  ++ +I   T  RN+EN  A++  +C  +       R +E      + +L
Sbjct:   567 AAIGAAEPVPVLVEMIGSGT-PRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLREL 625

Query:   295 AQDGTARAKRKATGILERLKR 315
             A +GT R KRKA  +LER+ R
Sbjct:   626 ALNGTDRGKRKAVQLLERMSR 646


>TAIR|locus:2146198 [details] [associations]
            symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0016567 "protein
            ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
            Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
            GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
            ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
            UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
            EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
            TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
            PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
        Length = 445

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 122/328 (37%), Positives = 183/328 (55%)

Query:     1 MISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSA--TLPDQTEAAKELRLLT 58
             +I +WC     + P +   + +  +   D +   SLL+++S+  ++ DQTEAAKEL L  
Sbjct:   126 VIKEWCLIHNFDRPKTSDEVID--LFTGDLE---SLLQRISSPSSVEDQTEAAKELALKA 180

Query:    59 KRMPSFRALF-GESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVA 117
             KR  S    F  +  D+I +LL+PLS S  E+  NP   E+++T L   S  + NK LVA
Sbjct:   181 KRFSSVCVYFVAKIPDSITRLLTPLSIS--EDS-NPEFLENIVTALHIFSTSEKNKTLVA 237

Query:   118 ETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQS 177
             E P+V+PLL   ++ GT+ TR ++AA + +LS  DSNK +IG S  LK LI +++EG   
Sbjct:   238 ENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNSEVLKALIHVIEEGDSL 297

Query:   178 AMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLST-NHRAVE 236
             A  +  SA+ NLC   E   +AV +G +   +KKI  G +V  LL++LA +ST NH+  E
Sbjct:   298 ATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSMLLSLLAFVSTQNHQTTE 357

Query:   237 EIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRT---------KWKAMREEEST 287
             E+ +LG +  +  I+R S    N EN + I++ IC S +          K   + EEE+ 
Sbjct:   358 EMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYKALQNVVLREEKRDVVLEEENK 417

Query:   288 HGTISKLAQDGTARAKRKATGILERLKR 315
             HGT ++L      RA   A  ILE + R
Sbjct:   418 HGTFTRLENQEAGRATSLAKRILEWILR 445


>TAIR|locus:2075140 [details] [associations]
            symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
            "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0070696 "transmembrane receptor protein serine/threonine kinase
            binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
            evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
            [GO:0006487 "protein N-linked glycosylation" evidence=RCA]
            [GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
            [GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
            protein localization" evidence=RCA] [GO:0046777 "protein
            autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
            transport" evidence=RCA] [GO:0048767 "root hair elongation"
            evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
            Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
            SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
            HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
            IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
            ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
            PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
            KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
            InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
            ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
        Length = 660

 Score = 459 (166.6 bits), Expect = 1.9e-43, P = 1.9e-43
 Identities = 120/323 (37%), Positives = 176/323 (54%)

Query:     1 MISQWCRSQGIELPNSVQYINEEGITE----ADRDHFLSLLKKMSATLP-DQTEAAKELR 55
             +I+QWC +  IE P     +    ++     A+ +    L+ +++   P DQ  AA E+R
Sbjct:   318 LIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEIR 377

Query:    56 LLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKL 115
             LL KR    R    E+  AIP L+  LS        +  +QE  +T LLNLSI +NNK  
Sbjct:   378 LLAKRNADNRVAIAEA-GAIPLLVGLLSTP------DSRIQEHSVTALLNLSICENNKGA 430

Query:   116 VAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGH 175
             +      IP ++  L+ G++E R NAAA LF+LS +D NK  IG  GA+ PL+ LL+EG 
Sbjct:   431 IVSAG-AIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGT 489

Query:   176 QSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD---GVHVDELLAILAMLSTNH 232
             Q   KD A+A+FNLCI   NK +A+R G +  + + + +   G+ VDE LAILA+LS++ 
Sbjct:   490 QRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGM-VDEALAILAILSSHP 548

Query:   233 RAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTIS 292
                  IG    V  ++  IR  +  RN+EN  A+L  +C  D  +     ++    G + 
Sbjct:   549 EGKAIIGSSDAVPSLVEFIRTGS-PRNRENAAAVLVHLCSGD-PQHLVEAQKLGLMGPLI 606

Query:   293 KLAQDGTARAKRKATGILERLKR 315
              LA +GT R KRKA  +LER+ R
Sbjct:   607 DLAGNGTDRGKRKAAQLLERISR 629


>TAIR|locus:2013990 [details] [associations]
            symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
            "kinesin binding" evidence=IEA] InterPro:IPR000225
            InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
            PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
            EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
            EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
            EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
            UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
            IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
            GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
            InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
            ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
        Length = 628

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 119/326 (36%), Positives = 182/326 (55%)

Query:     1 MISQWCRSQGIELPNSV---QYINEEGI---TEADRDHFLSLLKKMSA-TLPDQTEAAKE 53
             +ISQWC    IE P      +  N +G       D     +L+ K+S+ ++ D+  A  E
Sbjct:   305 LISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRRTAVSE 364

Query:    54 LRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNK 113
             +R L+KR    R L  E+  AIP L+  L+     +G +   QE+ +T +LNLSI+++NK
Sbjct:   365 IRSLSKRSTDNRILIAEA-GAIPVLVKLLTS----DG-DTETQENAVTCILNLSIYEHNK 418

Query:   114 KLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDE 173
             +L+     V  +++  LR+G++E R NAAA LF+LS  D NK +IG SGA+  L+DLL  
Sbjct:   419 ELIMLAGAVTSIVL-VLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQY 477

Query:   174 GHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVH---VDELLAILAMLST 230
             G     KD A+A+FNLCI   NK RAVR G V  ++K + D       DE L IL++L++
Sbjct:   478 GSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLAS 537

Query:   231 NHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGT 290
             N  A   I     +  ++  +++    RN+EN  AIL  +C  D  K  ++    +    
Sbjct:   538 NQVAKTAILRANAIPPLIDCLQKDQ-PRNRENAAAILLCLCKRDTEKLISIGRLGAVV-P 595

Query:   291 ISKLAQDGTARAKRKATGILERLKRT 316
             + +L++DGT RAKRKA  +LE L+++
Sbjct:   596 LMELSRDGTERAKRKANSLLELLRKS 621


>TAIR|locus:2162276 [details] [associations]
            symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
            ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
            fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
            evidence=RCA] [GO:0048610 "cellular process involved in
            reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
            evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
            SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
            GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
            HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
            UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
            PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
            KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
            InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
            ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
        Length = 660

 Score = 413 (150.4 bits), Expect = 3.8e-38, P = 3.8e-38
 Identities = 106/320 (33%), Positives = 178/320 (55%)

Query:     1 MISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSAT-LPDQTEAAKELRLLTK 59
             +I QWC     ++P   + ++ +   E  +D    L++ +S++ L +Q  + K++RLL +
Sbjct:   352 LIMQWCEKNNFKIPE--KEVSPDSQNE-QKDEVSLLVEALSSSQLEEQRRSVKQMRLLAR 408

Query:    60 RMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAET 119
               P  R L   +  AIP L+  LS    ++GI    QE+ +TTLLNLSI + NKKL++  
Sbjct:   409 ENPENRVLIANA-GAIPLLVQLLSYP--DSGI----QENAVTTLLNLSIDEVNKKLISNE 461

Query:   120 PMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAM 179
                IP +++ L +G  E R N+AAALF+LS LD NK  IG S  + PL+DLL  G     
Sbjct:   462 G-AIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGK 520

Query:   180 KDVASAIFNLCITHENKARAVRDGGVSVILKKIMD---GVHVDELLAILAMLSTNHRAVE 236
             KD  +A+FNL +   NK RA+  G V  +L  + D   G+ +DE L+IL +L+++    +
Sbjct:   521 KDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGM-IDEALSILLLLASHPEGRQ 579

Query:   237 EIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQ 296
              IG L  +  ++  IR+ T  +NKE   ++L  +  S+ + +     +   +  + ++  
Sbjct:   580 AIGQLSFIETLVEFIRQGT-PKNKECATSVLLELG-SNNSSFILAALQFGVYEYLVEITT 637

Query:   297 DGTARAKRKATGILERLKRT 316
              GT RA+RKA  +++ + ++
Sbjct:   638 SGTNRAQRKANALIQLISKS 657


>TAIR|locus:2158252 [details] [associations]
            symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
            "MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
            myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0006865 "amino acid transport"
            evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
            [GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
            [GO:0007154 "cell communication" evidence=RCA] [GO:0009409
            "response to cold" evidence=RCA] [GO:0009414 "response to water
            deprivation" evidence=RCA] [GO:0009611 "response to wounding"
            evidence=RCA] [GO:0009627 "systemic acquired resistance"
            evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
            evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
            pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
            salicylic acid mediated signaling pathway" evidence=RCA]
            [GO:0009867 "jasmonic acid mediated signaling pathway"
            evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
            response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
            protein response" evidence=RCA] [GO:0031348 "negative regulation of
            defense response" evidence=RCA] [GO:0034976 "response to
            endoplasmic reticulum stress" evidence=RCA] [GO:0042538
            "hyperosmotic salinity response" evidence=RCA] [GO:0043069
            "negative regulation of programmed cell death" evidence=RCA]
            [GO:0050832 "defense response to fungus" evidence=RCA]
            InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
            Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
            SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
            GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
            HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
            IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
            ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
            PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
            KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
            InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
            ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
        Length = 707

 Score = 410 (149.4 bits), Expect = 1.2e-37, P = 1.2e-37
 Identities = 107/313 (34%), Positives = 171/313 (54%)

Query:     5 WCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSF 64
             W R  GI +P +V+        E +    +  LK  S++L  Q EA   +R+L +     
Sbjct:   400 W-RHPGI-IPATVRETGSSSSIETEVKKLIDDLK--SSSLDTQREATARIRILARNSTDN 455

Query:    65 RALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIP 124
             R +     +AIP L+S L  +      +  +Q D +T LLNLSI+DNNK L+AE+  ++P
Sbjct:   456 RIVIARC-EAIPSLVSLLYST------DERIQADAVTCLLNLSINDNNKSLIAESGAIVP 508

Query:   125 LLMDALRSGTIE-TRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVA 183
             L+   L++G +E  ++N+AA LF+LS ++  K  IG++GA++PL+DLL  G  S  KD A
Sbjct:   509 LI-HVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAA 567

Query:   184 SAIFNLCITHENKARAVRDGGVSVILKKIMDGVH--VDELLAILAMLSTNHRAVEEIGDL 241
             +A+FNL I HENK + +  G V  +++ +MD     V++ + +LA L+T       IG+ 
Sbjct:   568 TALFNLSIHHENKTKVIEAGAVRYLVE-LMDPAFGMVEKAVVVLANLATVREGKIAIGEE 626

Query:   242 GGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTAR 301
             GG+  ++ ++   +  R KEN  A L  +C +   K+      E     +  L + GTAR
Sbjct:   627 GGIPVLVEVVELGSA-RGKENATAALLQLC-THSPKFCNNVIREGVIPPLVALTKSGTAR 684

Query:   302 AKRKATGILERLK 314
              K KA  +L+  K
Sbjct:   685 GKEKAQNLLKYFK 697


>TAIR|locus:2045334 [details] [associations]
            symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
            evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
            [GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
            InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
            SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
            RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
            SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
            KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
        Length = 829

 Score = 386 (140.9 bits), Expect = 6.7e-37, Sum P(2) = 6.7e-37
 Identities = 102/272 (37%), Positives = 151/272 (55%)

Query:    41 SATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVI 100
             S++L  Q +A  ELRLL K     R + G S  AI  L+  L  +          QE+ +
Sbjct:   555 SSSLDTQRQATAELRLLAKHNMDNRIVIGNS-GAIVLLVELLYSTDSAT------QENAV 607

Query:   101 TTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGK 160
             T LLNLSI+DNNKK +A+   + PL+   L +G+ E + N+AA LF+LS ++ NK  IG+
Sbjct:   608 TALLNLSINDNNKKAIADAGAIEPLI-HVLENGSSEAKENSAATLFSLSVIEENKIKIGQ 666

Query:   161 SGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVH--V 218
             SGA+ PL+DLL  G     KD A+A+FNL I  ENKA  V+ G V  ++  +MD     V
Sbjct:   667 SGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLID-LMDPAAGMV 725

Query:   219 DELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKW 278
             D+ +A+LA L+T       IG  GG+  ++ ++   +  R KEN  A L  +  ++  ++
Sbjct:   726 DKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSA-RGKENAAAALLQLS-TNSGRF 783

Query:   279 KAMREEESTHGTISKLAQDGTARAKRKATGIL 310
               M  +E     +  L+Q GT RA+ KA  +L
Sbjct:   784 CNMVLQEGAVPPLVALSQSGTPRAREKAQALL 815

 Score = 138 (53.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
 Identities = 66/304 (21%), Positives = 130/304 (42%)

Query:    14 PNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHD 73
             P++   ++ E    AD +   +  +   AT P  ++A+ E+R       +  A   +  D
Sbjct:   445 PSATSTVSNEEFPRADANE--NSEESAHAT-PYSSDASGEIRSGPLAATTSAATRRDLSD 501

Query:    74 AIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSG 133
               P+ +   +  +     +  L   +++   N +  D     ++E    +  L++ L+S 
Sbjct:   502 FSPKFMDRRTRGQFWRRPSERLGSRIVSAPSNETRRD-----LSEVETQVKKLVEELKSS 556

Query:   134 TIETRSNAAAALFTLSALD-SNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCIT 192
             +++T+  A A L  L+  +  N+ VIG SGA+  L++LL     +  ++  +A+ NL I 
Sbjct:   557 SLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSIN 616

Query:   193 HENKARAVRDGG-VSVILKKIMDGVHV--DELLAILAMLSTNHRAVEEIGDLGGVSCMLR 249
               NK +A+ D G +  ++  + +G     +   A L  LS       +IG  G +  ++ 
Sbjct:   617 DNNK-KAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVD 675

Query:   250 IIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGI 309
             ++   T  R K++    L  + +    K  AM  +      +  L  D  A    KA  +
Sbjct:   676 LLGNGT-PRGKKDAATALFNLSIHQENK--AMIVQSGAVRYLIDL-MDPAAGMVDKAVAV 731

Query:   310 LERL 313
             L  L
Sbjct:   732 LANL 735

 Score = 45 (20.9 bits), Expect = 6.7e-37, Sum P(2) = 6.7e-37
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query:     1 MISQWCRSQGIELP--NSVQYINE 22
             +I+ WC +  ++LP  N    +NE
Sbjct:   295 LIANWCETNDVKLPDPNKSTSLNE 318


>TAIR|locus:2096687 [details] [associations]
            symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000225
            InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
            EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
            RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
            SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
            KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
            PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
        Length = 355

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 99/293 (33%), Positives = 170/293 (58%)

Query:    31 DHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENG 90
             +H +S L   S ++ +Q +AA E+RLL+K  P  R    ++  AI  L+S +S S  +  
Sbjct:    65 NHLVSHLDS-SYSIDEQKQAAMEIRLLSKNKPENRIKIAKA-GAIKPLISLISSSDLQ-- 120

Query:    91 INPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSA 150
                 LQE  +T +LNLS+ D NK+ +A +  + PL+  AL+ GT   + NAA AL  LS 
Sbjct:   121 ----LQEYGVTAILNLSLCDENKESIASSGAIKPLVR-ALKMGTPTAKENAACALLRLSQ 175

Query:   151 LDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILK 210
             ++ NK  IG+SGA+  L++LL+ G   A KD ++A+++LC   ENK RAV+ G +  +++
Sbjct:   176 IEENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVE 235

Query:   211 KIMD-GVH-VDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILH 268
              + D G + VD+   ++++L +   +   I + GGV  ++ I+   T  R KE  ++IL 
Sbjct:   236 LMADFGSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGT-QRQKEMAVSILL 294

Query:   269 TICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLKRTVNLTH 321
              +C  +   ++ M   E     +  L+Q GT+RAK+KA  ++E L++  ++++
Sbjct:   295 QLC-EESVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISN 346


>TAIR|locus:2178818 [details] [associations]
            symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009693 "ethylene
            biosynthetic process" evidence=RCA] InterPro:IPR000225
            InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
            EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
            UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
            EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
            TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
            PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
            Uniprot:Q8LGC7
        Length = 357

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 95/278 (34%), Positives = 160/278 (57%)

Query:    41 SATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVI 100
             S+++ +Q +AA E+RLL+K  P  R    ++  AI  L+S +S S  +      LQE  +
Sbjct:    72 SSSIEEQKQAAMEIRLLSKNKPENRIKLAKA-GAIKPLVSLISSSDLQ------LQEYGV 124

Query:   101 TTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGK 160
             T +LNLS+ D NK+++  +  V PL+ +ALR GT  T+ NAA AL  LS ++ NK  IG+
Sbjct:   125 TAVLNLSLCDENKEMIVSSGAVKPLV-NALRLGTPTTKENAACALLRLSQVEENKITIGR 183

Query:   161 SGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHV 218
             SGA+  L++LL+ G   A KD ++A+++LC T+ENK RAV  G +  +++ ++D     V
Sbjct:   184 SGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMV 243

Query:   219 DELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKW 278
             D+   ++ +L +   +   + + GGV  ++ I+   T  R KE  ++IL  +C  +   +
Sbjct:   244 DKSAFVMNLLMSAPESKPAVVEEGGVPVLVEIVEAGT-QRQKEISVSILLQLC-EESVVY 301

Query:   279 KAMREEESTHGTISKLAQDGTAR-AKRKATGILERLKR 315
             + M   E     +  L+Q   +R AK KA  ++E L++
Sbjct:   302 RTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLRQ 339


>TAIR|locus:2102455 [details] [associations]
            symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
            "kinesin complex" evidence=IEA] [GO:0016567 "protein
            ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
            evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
            SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
            GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
            HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
            RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
            ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
            EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
            TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
            PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
            Uniprot:Q8GWV5
        Length = 760

 Score = 344 (126.2 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 104/303 (34%), Positives = 160/303 (52%)

Query:    16 SVQYINEEGITEADRDHFLSLLKKM-SATLPDQTEAAKELRLLTKRMPSFRALFGESHDA 74
             SV  +++ G       H + L++ + S +   +T AA E+R LT      R   G    A
Sbjct:   459 SVHDLDDSGTMTTS--HTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRC-GA 515

Query:    75 IPQLLSPL-SESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSG 133
             I  LLS L SE K         QE  +T LLNLSI + NK ++ E   + PL+   L +G
Sbjct:   516 ITPLLSLLYSEEKLT-------QEHAVTALLNLSISELNKAMIVEVGAIEPLV-HVLNTG 567

Query:   134 TIETRSNAAAALFTLSALDSNKEVIGKSGA-LKPLIDLLDEGHQSAMKDVASAIFNLCIT 192
                 + N+AA+LF+LS L  N+E IG+S A ++ L++LL +G     KD ASA+FNL IT
Sbjct:   568 NDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSIT 627

Query:   193 HENKARAVRDGGVSVILKKIMDGVH-VDELLAILAMLSTNHRAVEEIGDLGGVSCMLRII 251
             H+NKAR V+   V  +++ +   +  VD+ +A+LA LS      + I   GG+  ++  +
Sbjct:   628 HDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETV 687

Query:   252 RESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILE 311
              +    R KEN  ++L  +CL+   K+  +  +E     +  L+Q GT RAK KA  +L 
Sbjct:   688 -DLGSQRGKENAASVLLQLCLNS-PKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLS 745

Query:   312 RLK 314
               +
Sbjct:   746 HFR 748

 Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 50/204 (24%), Positives = 93/204 (45%)

Query:    79 LSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETR 138
             +SP    +  N +N    E         S+HD +      T   I L+ D L+SG+ + +
Sbjct:   434 MSPKKNLESSNNVN---HEHSAAKTYECSVHDLDDSGTMTTSHTIKLVED-LKSGSNKVK 489

Query:   139 SNAAAAL--FTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENK 196
             + AAA +   T+++++ N+  IG+ GA+ PL+ LL    +   +   +A+ NL I+  NK
Sbjct:   490 TAAAAEIRHLTINSIE-NRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNK 548

Query:   197 ARAVRDGGVSVILKKIMDGVH--VDELLAILAMLSTNHRAVEEIGDLGG-VSCMLRIIRE 253
             A  V  G +  ++  +  G     +   A L  LS      E IG     +  ++ ++ +
Sbjct:   549 AMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGK 608

Query:   254 STCDRNKENCIAILHTICLSDRTK 277
              T  R K++  + L  + ++   K
Sbjct:   609 GTF-RGKKDAASALFNLSITHDNK 631


>TAIR|locus:2130699 [details] [associations]
            symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
            "calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
            organization" evidence=RCA] [GO:0009651 "response to salt stress"
            evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
            PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
            RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
            ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
            GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
        Length = 472

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 95/278 (34%), Positives = 147/278 (52%)

Query:    41 SATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVI 100
             S+++  +  AA +LRLL K     R L GES  AI Q L PL   +C +   P  QE  +
Sbjct:   194 SSSVAIKRSAAAKLRLLAKNRADNRVLIGES-GAI-QALIPLL--RCND---PWTQEHAV 246

Query:   101 TTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGK 160
             T LLNLS+HD NK ++A    +  L+   L++GT  ++ NAA AL +L+ L+ NK  IG 
Sbjct:   247 TALLNLSLHDQNKAVIAAGGAIKSLVW-VLKTGTETSKQNAACALLSLALLEENKGSIGA 305

Query:   161 SGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD-GVHVD 219
              GA+ PL+ LL  G     KD  + ++ LC   +NK RAV  G V  ++  + + G  + 
Sbjct:   306 CGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMA 365

Query:   220 E-LLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKW 278
             E  + +L+ L+      E I + GG++ ++  I + +  + KE  I  L  +C SD  + 
Sbjct:   366 EKAMVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDGSV-KGKEFAILTLLQLC-SDSVRN 423

Query:   279 KAMREEESTHGTISKLAQDGTA--RAKRKATGILERLK 314
             + +   E     +  L+Q G+   RAKRKA  +L  L+
Sbjct:   424 RGLLVREGAIPPLVGLSQSGSVSVRAKRKAERLLGYLR 461

 Score = 168 (64.2 bits), Expect = 8.1e-10, P = 8.1e-10
 Identities = 52/196 (26%), Positives = 98/196 (50%)

Query:   123 IPLLMDALRSGTIETRSNAAAALFTLSALDS-NKEVIGKSGALKPLIDLLDEGHQSAMKD 181
             + L +D LRS ++  + +AAA L  L+   + N+ +IG+SGA++ LI LL        + 
Sbjct:   185 VKLCIDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEH 244

Query:   182 VASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVEE---- 237
               +A+ NL +  +NKA     G +  ++  +  G    +  A  A+LS     +EE    
Sbjct:   245 AVTALLNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSL--ALLEENKGS 302

Query:   238 IGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQD 297
             IG  G +  ++ ++   +C R K++ +  L+ +C   + K +A+    +    +  +A++
Sbjct:   303 IGACGAIPPLVSLLLNGSC-RGKKDALTTLYKLCTLQQNKERAVTAG-AVKPLVDLVAEE 360

Query:   298 GTARAKRKATGILERL 313
             GT  A+ KA  +L  L
Sbjct:   361 GTGMAE-KAMVVLSSL 375


>TAIR|locus:2013688 [details] [associations]
            symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
            [GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
            "plant-type hypersensitive response" evidence=IGI] [GO:0009814
            "defense response, incompatible interaction" evidence=IMP]
            [GO:0009817 "defense response to fungus, incompatible interaction"
            evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
            SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
            GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
            GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
            HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
            RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
            SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
            EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
            TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
            ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
        Length = 729

 Score = 315 (115.9 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 107/334 (32%), Positives = 164/334 (49%)

Query:     1 MISQWCRSQGI-------ELPNS--VQYINEEGITEADRDHFLSLLKKMS-ATLPDQTEA 50
             +I QWC + GI       + PN      +  +   EA++     L+K ++  +   QT A
Sbjct:   367 LIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAAQTVA 426

Query:    51 AKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHD 110
             A+E+RLL K     RA   E+  AIP L   L+    EN I    QE+ +T +LNLSI++
Sbjct:   427 AREIRLLAKTGKENRAYIAEA-GAIPHLCRLLTS---ENAI---AQENSVTAMLNLSIYE 479

Query:   111 NNKKLVAETPMVIPLLMDALRSG-TIETRSNAAAALFTLSALDSNKEVIG-KSGALKPLI 168
              NK  + E    +  ++  L SG T+E + NAAA LF+LSA+   K+ I      ++ L 
Sbjct:   480 KNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALA 539

Query:   169 DLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIM-DGVHVDELLAILAM 227
              LL  G     KD  +A++NL    +N +R +  GGVS ++  +  +GV  +E    LA+
Sbjct:   540 LLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGV-AEEAAGALAL 598

Query:   228 LSTNHRAVEEIG-DLGGVSCMLRIIRESTCDRNKENCIAILHTICLSD--RTKWKAMREE 284
             L       E IG +   V+ ++ ++R  T  R KEN +A L  +C S       K +R  
Sbjct:   599 LVRQSLGAEAIGKEDSAVAGLMGMMRCGT-PRGKENAVAALLELCRSGGAAVAEKVLRAP 657

Query:   285 ESTHGTISKLAQDGTARAKRKATGILERLKRTVN 318
              +  G +  L   GT RA+RKA  +    +R  N
Sbjct:   658 -AIAGLLQTLLFTGTKRARRKAASLARVFQRREN 690


>TAIR|locus:2154124 [details] [associations]
            symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
            "kinesin complex" evidence=IEA] [GO:0016567 "protein
            ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
            evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
            SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
            GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
            ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
            IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
            ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
            EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
            TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
            PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
        Length = 559

 Score = 281 (104.0 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
 Identities = 67/220 (30%), Positives = 117/220 (53%)

Query:    95 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 154
             +Q +   +++NLS+   NK  +  +  V PLL+D L+SGT E + + A ALF+L+  D N
Sbjct:   292 VQTNAAASVVNLSLEKQNKVKIVRSGFV-PLLIDVLKSGTTEAQEHVAGALFSLALEDEN 350

Query:   155 KEVIGKSGALKPLIDLLDEGH-QSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIM 213
             K VIG  GA++PL+  L     + A +D A A+++L +   N+ R VR G V  +L  + 
Sbjct:   351 KMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVR 410

Query:   214 DGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRE---STCDRNKENCIAILHTI 270
              G     +L +L  L+        + D   V+ ++  +RE      +  +ENC+A+L T+
Sbjct:   411 SGDSTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTL 470

Query:   271 CLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGIL 310
             C  +  +++ +  E      + ++ ++G  R K KA+ IL
Sbjct:   471 CQGN-LRFRGLASEAGAEEVLMEVEENGNERVKEKASKIL 509

 Score = 42 (19.8 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query:     2 ISQWCRSQGIELPNSVQYINEEGITEADRD 31
             I  WC  Q ++ P        EG+  A  D
Sbjct:    94 IFSWCDRQKVDHPRPPDAAYVEGVVRARMD 123


>TAIR|locus:2173742 [details] [associations]
            symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
            evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
            SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
            GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
            eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
            RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
            SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
            KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
            Genevestigator:Q9FL17 Uniprot:Q9FL17
        Length = 550

 Score = 286 (105.7 bits), Expect = 1.8e-24, P = 1.8e-24
 Identities = 64/225 (28%), Positives = 124/225 (55%)

Query:    95 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 154
             +Q +V   L+NLS+  +NK  +  + +V PL+ D L+ G++E + ++A  +F+L+  D N
Sbjct:   286 VQVNVTAVLVNLSLEKSNKVKIVRSGIVPPLI-DVLKCGSVEAQEHSAGVIFSLALEDEN 344

Query:   155 KEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD 214
             K  IG  G L+PL+ L+  G +    D A A+++L +   N+ + V+ G V ++L  +  
Sbjct:   345 KTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSL 404

Query:   215 GVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRES--TCDRNKENCIAILHTICL 272
             G  +  +L IL  +++   +   + D GGV CM+ ++R      +  +E+C+A+L+ +  
Sbjct:   405 GQMIGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSH 464

Query:   273 SDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLKRTV 317
                 ++K +    +    + K+ + G  RAK+KA  +LE L+  +
Sbjct:   465 DGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRVLEVLRAKI 509

 Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query:    50 AAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSES---KCENGINPNLQEDVITTLLNL 106
             +++ L+L TK         GE     P L +P  E+   K ++     ++E +I+ +  +
Sbjct:   198 SSRTLQLTTKPSCFSSPSSGEIESLEPNL-TPEEEALLTKLKSNRISEIEEALIS-IRRI 255

Query:   107 SIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKP 166
             +  D + ++   T  VI  L   + S     + N  A L  LS   SNK  I +SG + P
Sbjct:   256 TRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLVNLSLEKSNKVKIVRSGIVPP 315

Query:   167 LIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHV---DELLA 223
             LID+L  G   A +  A  IF+L +  ENK      GG+  +L  I  G  +   D  LA
Sbjct:   316 LIDVLKCGSVEAQEHSAGVIFSLALEDENKTAIGVLGGLEPLLHLIRVGTELTRHDSALA 375

Query:   224 I--LAMLSTNHRAVEEIG 239
             +  L+++ +N   + ++G
Sbjct:   376 LYHLSLVQSNRGKLVKLG 393


>TAIR|locus:2100372 [details] [associations]
            symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
            ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
            evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
            SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
            GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
            HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
            EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
            UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
            PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
            KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
            InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
            Genevestigator:Q9STT1 Uniprot:Q9STT1
        Length = 509

 Score = 257 (95.5 bits), Expect = 9.7e-24, Sum P(2) = 9.7e-24
 Identities = 65/227 (28%), Positives = 122/227 (53%)

Query:    95 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 154
             +Q +   +++NLS+   NK  +  +  V PLL+D L+SG+ E + +   ALF+L+  + N
Sbjct:   241 VQTNAAASIVNLSLEKPNKLKIVRSGFV-PLLIDVLKSGSTEAQEHVIGALFSLAVEEEN 299

Query:   155 KEVIGKSGALKPLIDLLDEGH-QSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIM 213
             K VIG  GA++PL+  L     + A +D A A+++L +   N++R V+ G V ++L  I 
Sbjct:   300 KMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIR 359

Query:   214 DGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRN----KENCIAILHT 269
              G     +L +L  L+        + D   VS ++  +RES    +    +ENC+  L T
Sbjct:   360 SGESASRILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLT 419

Query:   270 ICLSDRTKWKAMREEESTHGTISKL--AQDGTARAKRKATGILERLK 314
             + + +  +++ +  E      ++++  ++ G+ R K KA+ IL+ L+
Sbjct:   420 LSVGNM-RFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQTLR 465

 Score = 130 (50.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
 Identities = 56/195 (28%), Positives = 88/195 (45%)

Query:   119 TPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSA 178
             T  ++ LL   + S     ++NAAA++  LS    NK  I +SG +  LID+L  G   A
Sbjct:   223 TDRILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIVRSGFVPLLIDVLKSGSTEA 282

Query:   179 MKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDG----VHVDELLAILAM-LSTNHR 233
              + V  A+F+L +  ENK      G V  +L  +          D  LA+  + L  N+R
Sbjct:   283 QEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNR 342

Query:   234 AVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTIC-LSDRTKWK-AMREEESTHGTI 291
             +   +   G V  ML +IR        E+   IL  +C L+  ++ K AM +  +    +
Sbjct:   343 S--RLVKAGAVPMMLSMIRSG------ESASRILLLLCNLAACSEGKGAMLDGNAVSILV 394

Query:   292 SKLAQDGTARAKRKA 306
              KL + G A +   A
Sbjct:   395 GKLRESGGAESDAAA 409

 Score = 43 (20.2 bits), Expect = 9.7e-24, Sum P(2) = 9.7e-24
 Identities = 9/30 (30%), Positives = 11/30 (36%)

Query:     2 ISQWCRSQGIELPNSVQYINEEGITEADRD 31
             I  WC    +E P    Y   EG+     D
Sbjct:    73 ILSWCDRNKMEHPRPPDYAYVEGVVRTRMD 102


>UNIPROTKB|Q6EUK7 [details] [associations]
            symbol:PUB4 "U-box domain-containing protein 4"
            species:39947 "Oryza sativa Japonica Group" [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
            "protein ubiquitination" evidence=IDA] InterPro:IPR000225
            InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
            PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
            EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
            RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
            EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
            KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
            eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
            ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
        Length = 728

 Score = 279 (103.3 bits), Expect = 2.1e-23, P = 2.1e-23
 Identities = 100/334 (29%), Positives = 167/334 (50%)

Query:     1 MISQWCRSQGIELPNSVQYINEEGITE--ADRDHFLSLLKKMSAT-------LPDQTE-- 49
             +ISQWC   G++  +S +  + EG+ E  A      + ++   AT       L D +E  
Sbjct:   359 LISQWCGVYGLQY-DSPE--SNEGMAECVAASCSSRAAMEANKATARILVRMLEDGSENV 415

Query:    50 ---AAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNL 106
                AAKE+RLL K     RA   +   AIP LL  L  S      +   QE+ +T LLNL
Sbjct:   416 KAVAAKEIRLLAKTGKQNRAFIADL-GAIP-LLCRLLLSN-----DWMAQENAVTALLNL 468

Query:   107 SIHDNNKKLVAETPMVIPLLMDALRSG-TIETRSNAAAALFTLSALDSNKEVI-GKSGAL 164
             SI + NK  + E    + L++  L++G T E + NAAA LF+LS + + K++I  + GA+
Sbjct:   469 SIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAV 528

Query:   165 KPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAI 224
             + L  +L +G     KD   A+FNL    E+ AR +    V  +++ + +    +E    
Sbjct:   529 EELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRNDTVSEEAAGA 588

Query:   225 LAMLSTNHRAVEEIGDLGGV-SCMLRIIRESTCDRNKENCIAILHTICLSDRTKW-KAMR 282
             LA+L      V  +G    V + ++ ++R  T  + KEN ++ L+ IC    +   + + 
Sbjct:   589 LALLMKQPSIVHLVGSSETVITSLVGLMRRGT-PKGKENAVSALYEICRRGGSALVQRVA 647

Query:   283 EEESTHGTISKLAQDGTARAKRKATGILERLKRT 316
             +    +  I  +  +GT RAK+KA+ I++  +R+
Sbjct:   648 KIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRS 681


>TAIR|locus:2171810 [details] [associations]
            symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
            evidence=IEA] [GO:0016567 "protein ubiquitination"
            evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
            [GO:0070696 "transmembrane receptor protein serine/threonine kinase
            binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
            SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
            GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
            EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
            UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
            PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
            KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
            HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
            ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
        Length = 556

 Score = 246 (91.7 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
 Identities = 72/266 (27%), Positives = 129/266 (48%)

Query:    65 RALFGESHDAIPQLLSPLSESKCENGINPN---LQEDVITTLLNLSIHDNNKKLVAETPM 121
             R +   + +A   L SP   S  +N I      +Q + + +L+NLS+   NK  +     
Sbjct:   249 RKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTIVRLGF 308

Query:   122 VIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMK- 180
             V P+L+D L+SG+ E + +AA  +F+LS  D NK  IG  GAL+PL+  L        + 
Sbjct:   309 V-PILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTRH 367

Query:   181 DVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVEEIGD 240
             D A A+++L +   N+++ VR G V  +   +  G      L ++  L+        + D
Sbjct:   368 DSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESASRALLVICNLACCSEGRSAMLD 427

Query:   241 LGGVSCMLRIIRESTCD-----RN----KENCIAILHTICLSDRTKWKAMREEESTHGTI 291
                V+ ++  +RE   +     R+    +ENC+A L  +   +  ++K + +E      +
Sbjct:   428 ANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALS-HESLRFKGLAKEARAVEVL 486

Query:   292 SKLAQDGTARAKRKATGILERLKRTV 317
              ++ + GT RA+ KA  IL+ ++  V
Sbjct:   487 KEVEERGTERAREKAKKILQLMRERV 512

 Score = 124 (48.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
 Identities = 49/208 (23%), Positives = 91/208 (43%)

Query:    96 QEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNK 155
             QE  +  +  ++  ++  ++   +P ++ LL + + S     ++NA A+L  LS    NK
Sbjct:   241 QEQGLIMMRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNK 300

Query:   156 EVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIM-- 213
               I + G +  LID+L  G + A +  A  IF+L +  +NK      G +  +L  +   
Sbjct:   301 LTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAA 360

Query:   214 --DGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTIC 271
               D    D  LA L  L+ N     ++  LG V  +  ++R    +      + I +  C
Sbjct:   361 ESDRTRHDSALA-LYHLTLNQTNRSKLVRLGAVPALFSMVRSG--ESASRALLVICNLAC 417

Query:   272 LSDRTKWKAMREEESTHGTISKLAQDGT 299
              S+     AM +  +    + KL ++ T
Sbjct:   418 CSEGRS--AMLDANAVAILVGKLREEWT 443

 Score = 121 (47.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 49/209 (23%), Positives = 91/209 (43%)

Query:     7 RSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRA 66
             + QG+ +   +   N+E          LSLLK M  +     +      L+   +     
Sbjct:   241 QEQGLIMMRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNK 300

Query:    67 LFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLL 126
             L       +P L+  L     E       QE    T+ +LS+ D+NK  +     + PLL
Sbjct:   301 LTIVRLGFVPILIDVLKSGSRE------AQEHAAGTIFSLSLEDDNKMPIGVLGALQPLL 354

Query:   127 MDALRSGTIE-TRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASA 185
               ALR+   + TR ++A AL+ L+   +N+  + + GA+  L  ++  G +SA + +   
Sbjct:   355 -HALRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSG-ESASRALL-V 411

Query:   186 IFNLCITHENKARAVRDGGVSVILKKIMD 214
             I NL    E ++  +    V++++ K+ +
Sbjct:   412 ICNLACCSEGRSAMLDANAVAILVGKLRE 440

 Score = 41 (19.5 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
 Identities = 8/24 (33%), Positives = 10/24 (41%)

Query:     2 ISQWCRSQGIELPNSVQYINEEGI 25
             I  WC + G+  P    Y   E I
Sbjct:    98 IDTWCDTVGVSRPQPPDYSTVERI 121


>TAIR|locus:2181077 [details] [associations]
            symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
            "Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
            evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
            evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
            [GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
            InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
            PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
            GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
            HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
            EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
            UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
            EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
            TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
            PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
            Uniprot:Q9LZW3
        Length = 674

 Score = 255 (94.8 bits), Expect = 6.9e-21, P = 6.9e-21
 Identities = 93/322 (28%), Positives = 152/322 (47%)

Query:     1 MISQWCRSQGI--EL--PNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRL 56
             +I  WCR Q I  EL      +    +   E  +     L++K+S    D      ELR 
Sbjct:   336 LIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVA--DSNGVVFELRA 393

Query:    57 LTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLV 116
             L K     RA   E+  AIP+L+  L+ ++C     P+LQ + +TT+LNLSI + NK  +
Sbjct:   394 LAKSDTVARACIAEA-GAIPKLVRYLA-TEC-----PSLQINAVTTILNLSILEQNKTRI 446

Query:   117 AETPMVIPLLMDALRSG-TIETRSNAAAALFTLSALDSNKEVIG-KSGALKPLIDLLDEG 174
              ET   +  +++ LRSG T E ++NAAA LF+L+ + + +  +G K+  +  L+DL  +G
Sbjct:   447 METDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQG 506

Query:   175 HQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRA 234
               S+ +D   AI NL    EN  R V  G +        +    +E +A++  +      
Sbjct:   507 PTSSKRDALVAILNLVAERENVGRFVEAGVMGAAGDAFQE--LPEEAVAVVEAVVRRGGL 564

Query:   235 VEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKA-MREEESTHGTISK 293
             +        +  +  ++RE   D  +E+  A L T+C    ++  A M         I +
Sbjct:   565 MAVSAAFSLIRLLGEVMREGA-DTTRESAAATLVTMCRKGGSELVAEMAAIPGIERVIWE 623

Query:   294 LAQDGTARAKRKATGILERLKR 315
             +   GTAR  RKA  ++  L+R
Sbjct:   624 MIGAGTARGGRKAASLMRYLRR 645


>TAIR|locus:2099634 [details] [associations]
            symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
            Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
            ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
            GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
        Length = 408

 Score = 220 (82.5 bits), Expect = 2.8e-16, P = 2.8e-16
 Identities = 80/298 (26%), Positives = 138/298 (46%)

Query:    26 TEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSES 85
             + A     LSL++  S     +  AAKE+R LTK     R  F +   A+  L+S L   
Sbjct:    62 SSASIQRVLSLIR--SEDCDSRLFAAKEIRRLTKTSHRCRRHFSQ---AVEPLVSMLRFD 116

Query:    86 KCENGINPNLQEDVITTLLNLSIHDN-NKKLVAETPMVIPLLMDALRSGTIETRSNAAAA 144
               E+       E  +  LLNL++ D  NK  + E   + P++ + L+S +   +  A+A+
Sbjct:   117 SPESH-----HEAALLALLNLAVKDEKNKVSIIEAGALEPII-NFLQSNSPTLQEYASAS 170

Query:   145 LFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGG 204
             L TLSA  +NK +IG +G +  L+ ++  G   A  D   A+ NL    +N +  +    
Sbjct:   171 LLTLSASANNKPIIGANGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNLSMILATKP 230

Query:   205 VSVIL---KKIMDGVHVDELLAILA---MLSTNHRAVEEIGDLGGVSCMLRIIRESTCDR 258
             +S IL   K         E    L    M+S        + D GGV  ++ ++   +   
Sbjct:   231 LSPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQA 290

Query:   259 NKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLKRT 316
              +E+ + +L T+C SDR+K++     E     + +L   GT++++ KA  +L  L+ +
Sbjct:   291 -REHAVGVLLTLCQSDRSKYREPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLRNS 347


>TAIR|locus:2141226 [details] [associations]
            symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
            "kinesin binding" evidence=IEA] InterPro:IPR001841
            InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
            Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
            SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
            GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
            EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
            IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
            ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
            EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
            TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
            InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
            ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
            Uniprot:O81902
        Length = 374

 Score = 213 (80.0 bits), Expect = 1.7e-15, P = 1.7e-15
 Identities = 72/264 (27%), Positives = 129/264 (48%)

Query:    11 IELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGE 70
             + L  S +   ++  + +     +S L   S++   + E+   L  LTKR  S R    E
Sbjct:    75 VSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTKRDSSIRRKVTE 134

Query:    71 SHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKK-LVAETPMVIPLLMDA 129
             S  A+   L       C +  N  LQE  ++ LLNLS+ D+NK  LVA+   VI  ++  
Sbjct:   135 S-GAVRAALD------CVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADG--VIRRIVTV 185

Query:   130 LRSGTIETRSNAAAALFTLSALDSNKEVIGK-SGALKPLIDLLDEGHQSAMKDVASAIFN 188
             LR G+ + ++ AA  L +L+ ++ NK  IG    A+  L+ LL  G+    K+ A+A++ 
Sbjct:   186 LRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERKESATALYA 245

Query:   189 LCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVEEIGDLGG-VSCM 247
             LC   +N+ R V  G V ++++    G+  +  + +L +L       EE+  + G V  +
Sbjct:   246 LCSFPDNRKRVVDCGSVPILVEAADSGL--ERAVEVLGLLVKCRGGREEMSKVSGFVEVL 303

Query:   248 LRIIRESTCDRNKENCIAILHTIC 271
             + ++R     +  +  + IL+ +C
Sbjct:   304 VNVLRNGNL-KGIQYSLFILNCLC 326


>TAIR|locus:2135788 [details] [associations]
            symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
            InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
            GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
            EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
            RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
            SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
            KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
            InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
            ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
        Length = 402

 Score = 202 (76.2 bits), Expect = 5.5e-14, P = 5.5e-14
 Identities = 77/295 (26%), Positives = 138/295 (46%)

Query:    34 LSLLKKM-SATLPDQTEAAKELRLLTKRMPSFRALFGESHDA--IPQLLSPLSESKCENG 90
             L L KK+    L  + EAAKE+R L ++ P   +   +  DA  IP L+  L  S     
Sbjct:    48 LHLSKKLLHGDLDFRIEAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPMLFSS----- 102

Query:    91 INPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSA 150
              N + +   +  LLNL++ +   K+       +P L+  L+      R  A AA+ TLSA
Sbjct:   103 -NVDARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSA 161

Query:   151 LDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILK 210
               +NK +I  SG    LI +L  G      D  +A+ NL    E  A  +    V  ++ 
Sbjct:   162 APANKAMIISSGVPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIH 221

Query:   211 KIMD-GVH---VDELLAILAMLSTN----HRAVEEIGDLGGVSCMLRIIRESTCDRNKEN 262
              + +   H    ++  A++ M+ ++      A+    D  G+  ++  + + +   + E+
Sbjct:   222 LLKECKKHSKFAEKATALVEMILSHSEDGRNAITSCED--GILTLVETVEDGS-PLSIEH 278

Query:   263 CIAILHTICLSDRTKW-KAMREEESTHGTISKLAQDGTARAKRKATGILERLKRT 316
              +  L ++C SDR K+ K + +E +  G +S    DGT++++ +A  +L+ L+ T
Sbjct:   279 AVGALLSLCRSDRDKYRKLILKEGAIPGLLSSTV-DGTSKSRDRARVLLDLLRET 332


>TAIR|locus:2195563 [details] [associations]
            symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
            [GO:0010029 "regulation of seed germination" evidence=IGI]
            InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
            SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
            GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
            EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
            ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
            RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
            SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
            GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
            OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
        Length = 686

 Score = 192 (72.6 bits), Expect = 2.6e-12, P = 2.6e-12
 Identities = 74/282 (26%), Positives = 141/282 (50%)

Query:    46 DQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLN 105
             +  +A  E+R+LTK    +R+   E+   +  L+  L         +P +QE+ +  ++N
Sbjct:   390 EMVKALVEIRILTKTSTFYRSCLVEA-GVVESLMKILRSD------DPRIQENAMAGIMN 442

Query:   106 LSIHDNNK-KLVAETPMVIPLLMDALRSGTI-ETRSNAAAALFTLSALDSNKEVIGK-SG 162
             LS     K ++V E    + L+++ L  G   E+R  AAAALF LS+L     +IG+ S 
Sbjct:   443 LSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISD 502

Query:   163 ALKPLIDLL---DEGHQSAMKDVASAIFNLCITH-ENKARAVRDGGVSVIL-----KKIM 213
             A+  L+ ++   D G  SA ++   AI +L +   +N  R +  G V V+L     ++I 
Sbjct:   503 AIPGLVRIVKSCDYG-DSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEIS 561

Query:   214 DGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCD-RNKENCIAILHTICL 272
             DGV  D + AILA ++     +  +   GG+   ++I+  S      K++C+A+L  +C 
Sbjct:   562 DGVTADSM-AILAKMAEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLCH 620

Query:   273 SDRTKWK-AMREEESTHGTISKLAQDGTARAKRKATGILERL 313
             +  +    ++ +  S  G++   + +G     +KA+ +++ +
Sbjct:   621 NGGSDVVGSLAKNPSIMGSLYTASSNGELGGGKKASALIKMI 662


>TAIR|locus:2008813 [details] [associations]
            symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
            "kinesin binding" evidence=IEA] InterPro:IPR000225
            InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
            SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
            GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
            HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
            EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
            RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
            ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
            PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
            GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
            InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
            Genevestigator:Q9CAG5 Uniprot:Q9CAG5
        Length = 782

 Score = 177 (67.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
 Identities = 70/291 (24%), Positives = 134/291 (46%)

Query:    25 ITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSE 84
             + E  +D  L++L +    L  + +  +++RLL K     R   G ++  +  LL  L  
Sbjct:   421 VLERYQD-LLAVLNEEEG-LEKKCKVVEKIRLLLKDDEEARIFMG-ANGFVEALLRFLGS 477

Query:    85 SKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAA 144
             +  +N  N   Q+     L NL++++N  K +  T  VI LL   + S   E+  +A A 
Sbjct:   478 AVDDN--NAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSA--ESHGSATAL 533

Query:   145 LFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMK-DVASAIFNLCITHENKARAVRDG 203
                LS LD  K VIG S A+  L+ LL +  ++  K D   A++NL  T+     A+   
Sbjct:   534 YLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLS-TYSPNIPALLSS 592

Query:   204 GVSVILKKIM----DGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRN 259
              +   L+ ++    + + +++ LA+L  L+++    +E     G+   L  + +      
Sbjct:   593 NIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTE 652

Query:   260 KENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGIL 310
             +E  ++ L  +C + R     M  +E    ++  ++ +GT R + K+  +L
Sbjct:   653 QEQAVSCLLILC-NGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLL 702

 Score = 44 (20.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
 Identities = 5/15 (33%), Positives = 10/15 (66%)

Query:     1 MISQWCRSQGIELPN 15
             +I+ WC   G ++P+
Sbjct:   334 LIASWCEQNGTQIPS 348


>TAIR|locus:2040214 [details] [associations]
            symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
            [GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
            binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
            PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
            GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
            PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
            ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
            EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
            TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
            InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
            ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
        Length = 468

 Score = 175 (66.7 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 85/314 (27%), Positives = 146/314 (46%)

Query:    22 EEGITEADRDHFLSLLKKMSATLPDQTEA-----------AKELRLLTKRMPSFRALFGE 70
             E G+    ++  L +LK++   L  + EA           A E+RLL K     R     
Sbjct:    90 ESGVETKKKEETLEILKRVVKDLQAEAEAEAEAAEKKIAAASEVRLLAKDDIEARVTLAM 149

Query:    71 SHDAIPQLLSPLS-ESKCENGINPNLQEDVITTLLNLSI-HDNNKKLVAETPMVIPLLMD 128
                AIP L+S +  ES+ E+ +  +L       LLNL I +D NK  + +  +V  +L  
Sbjct:   150 L-GAIPPLVSMIDDESQSEDALIASLY-----ALLNLGIGNDVNKAAIVKAGVVHKMLK- 202

Query:   129 ALRSGTIETRSNAAA--ALFT-LSALDSNKEVIGKSGALKPLIDLL---DEGHQS-AMKD 181
              + S     ++ A A  A F  LSALDSNK +IG SGA+  L+  L   +E   S A +D
Sbjct:   203 LVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLVKTLKNFEETSSSQARED 262

Query:   182 VASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVEEIGDL 241
                A++NL I H+N +  +    +  +L  + D    + +LAIL  + +     + IG++
Sbjct:   263 ALRALYNLSIYHQNVSFILETDLIPFLLNTLGDMEVSERILAILTNVVSVPEGRKAIGEV 322

Query:   242 -GGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTA 300
                   ++ ++  +   + +E  + IL  +         AM E      ++ +L   G+ 
Sbjct:   323 VEAFPILVDVLNWNDSIKCQEKAVYILMLMAHKGYGDRNAMIEA-GIESSLLELTLVGSP 381

Query:   301 RAKRKATGILERLK 314
              A+++A+ +LE L+
Sbjct:   382 LAQKRASRVLECLR 395


>TAIR|locus:2194564 [details] [associations]
            symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
            ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
            germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
            InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
            PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
            UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
            EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
            EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
            UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
            EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
            TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
            PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
            Uniprot:Q9XIJ5
        Length = 697

 Score = 174 (66.3 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 68/276 (24%), Positives = 132/276 (47%)

Query:    50 AAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIH 109
             A +E+R+ TK     R+   ++  A+  LL  LS       ++  +QE+ +  +LNLS H
Sbjct:   408 AVREIRVQTKTSSFNRSCLVKA-GAVTPLLKLLSS------VDIRIQENAMAGILNLSKH 460

Query:   110 DNNKKLVAETPMVIPLLMDALRSGT-IETRSNAAAALFTLSALDSNKEVIGKS-GALKPL 167
                K  +A   + I  L++ L  G   ETR  +A+ALF LS+++    +IG++  A+  L
Sbjct:   461 VTGKSKIAGEGLKI--LVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGL 518

Query:   168 IDLL--DEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILK-----KIMDGVHVDE 220
             ++++  D+   SA +    A+  L +  +N  R +  G V ++L      +I  G+  D 
Sbjct:   519 MNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTAD- 577

Query:   221 LLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCD--RNKENCIAILHTICLSD-RTK 277
              LA LA L+        +   GG+   ++I+  S       K++C+ ++  +CL+  R  
Sbjct:   578 CLATLAKLAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDV 637

Query:   278 WKAMREEESTHGTISKLAQDGTARAKRKATGILERL 313
                + +     G++  +  +G     +KA+ ++  +
Sbjct:   638 VGVLVKNSLVMGSLYTVLSNGEYGGSKKASALIRMI 673


>TAIR|locus:2032472 [details] [associations]
            symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
            [GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
            "kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
            SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
            HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
            ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
            RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
            SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
            GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
            OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
        Length = 771

 Score = 169 (64.5 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
 Identities = 69/300 (23%), Positives = 135/300 (45%)

Query:    14 PNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHD 73
             P+ V   +E  + E  +D  L+++ K    L  + +  + +R+L K     R L G ++ 
Sbjct:   412 PDEVD--SEINVLEGYQD-ILAIVDK-EEDLAKKCKVVENVRILLKDNEEARILMG-ANG 466

Query:    74 AIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSG 133
              +   L  L  +  +N  N   QE     L NL++++N  K +  T  VIPLL   +   
Sbjct:   467 FVEAFLQFLESAVHDN--NAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISCS 524

Query:   134 TIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMK-DVASAIFNLCIT 192
               +++  A A    LS L+  K VIG S A+   ++LL +  ++  K D   A++NL   
Sbjct:   525 --QSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTY 582

Query:   193 HENKARAVRDGGVSVILKKIMDGVH--VDELLAILAMLSTNHRAVEEIGDLGGVSCMLRI 250
               N    +    +  +      G H  +++ LA+L  L+++    EE+    G+   L  
Sbjct:   583 SPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLAT 642

Query:   251 IRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGIL 310
             + ++     +E  ++ L  +C    +  + + +E      +S ++ +G+ R + K+  +L
Sbjct:   643 VLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVS-ISVNGSPRGRDKSQKLL 701

 Score = 44 (20.5 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
 Identities = 6/14 (42%), Positives = 9/14 (64%)

Query:     1 MISQWCRSQGIELP 14
             +I+ WC   GI +P
Sbjct:   337 LIASWCEQNGITVP 350


>TAIR|locus:2145653 [details] [associations]
            symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
            [GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0019894 "kinesin binding"
            evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
            evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
            [GO:0010089 "xylem development" evidence=RCA] [GO:0010413
            "glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
            biosynthetic process" evidence=RCA] InterPro:IPR016024
            EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
            PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
            ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
            EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
            TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
            InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
            ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
        Length = 327

 Score = 164 (62.8 bits), Expect = 9.6e-10, P = 9.6e-10
 Identities = 74/283 (26%), Positives = 124/283 (43%)

Query:    40 MSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDV 99
             +S     Q EAA EL  L+++    R    E  + I  LLS L    C         E  
Sbjct:    10 LSGNRESQIEAAIELTNLSRKQ---RQKLAE-REIISPLLSMLQSQDCIT------TEVA 59

Query:   100 ITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGT-IETRSNAAAALFTLSALDSNKEVI 158
             ++ LL+L+      K+       +P L++ L+S T +     A A L  LS+ + NK  +
Sbjct:    60 LSALLSLAFGSERNKVRIVKSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKM 119

Query:   159 GKSGALKPLIDL--LDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKI---- 212
               +  ++ L+ L  LD     A  D  + + NL   H+     +  G    +L+ I    
Sbjct:   120 ASTRLVQLLVGLIGLDRLTIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQVINFCD 179

Query:   213 MDGVHVDELLAILA-MLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTIC 271
                   D+ +A+L  ++S +  +V  IG  G +  ++  I E +  + KE+ + IL  IC
Sbjct:   180 KSSELADKAVALLENIISHSPESVSSIG--GAIGVLVEAIEEGSA-QCKEHAVGILLGIC 236

Query:   272 LSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLK 314
              +DR   + M   E     + +++ DGT RAK  A  +L  L+
Sbjct:   237 NNDRETNRGMILREGVMPGLLQVSVDGTRRAKEMARELLLLLR 279


>TAIR|locus:1005716696 [details] [associations]
            symbol:AT1G08315 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000225
            InterPro:IPR016024 Pfam:PF00514 SMART:SM00185 EMBL:CP002684
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            UniGene:At.42266 UniGene:At.48169 EMBL:AK229288 IPI:IPI00546916
            RefSeq:NP_849613.1 ProteinModelPortal:Q0WNZ8 SMR:Q0WNZ8
            PRIDE:Q0WNZ8 EnsemblPlants:AT1G08315.1 GeneID:837352
            KEGG:ath:AT1G08315 TAIR:At1g08315 eggNOG:NOG245502
            InParanoid:Q0WNZ8 OMA:VAQVAGC PhylomeDB:Q0WNZ8
            ProtClustDB:CLSN2690788 Genevestigator:Q0WNZ8 Uniprot:Q0WNZ8
        Length = 325

 Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 75/307 (24%), Positives = 149/307 (48%)

Query:    28 ADRDHFLSLLKKMSATLPDQTEAAK--ELRLLTKRMPSFRALFGESHDAIPQLLSPLSES 85
             A R    +++ ++S+ + +QT AA   ELRL++K+ P  R +  ++  AIP L   L  S
Sbjct:     4 AKRRTMSTIVSRLSS-VSEQTRAAALAELRLISKQDPDSRLIIADA-GAIPYLAETLYSS 61

Query:    86 KCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIET-----RSN 140
                +      QE+   TLLNLSI   +++ +  +  ++  L  ALR     T     +S+
Sbjct:    62 SHSS------QENAAATLLNLSI--TSREPLMSSRGLLDALSHALRHHDTTTSPAAVQSS 113

Query:   141 AAAALFTLSALDSNKEVIG-KSGALKPLIDLL--DEGHQSAMKDVASAIFNLCITHENKA 197
             AA     L A +S + +IG K   +  LI ++   + H  ++KD   A+F + +   N++
Sbjct:   114 AATIYSLLIAEESYRPIIGSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRS 173

Query:   198 RAVRDGGV----SVILKKIMDGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRE 253
               +  G +    S+I+K    G+ V++  A++A ++    + + +  + G + +  ++  
Sbjct:   174 TMISLGAIPALFSLIVKDSRCGI-VEDATAVMAQVAGCEDSEDGMRRVSGANVLADLLDP 232

Query:   254 STCD--RNKENCIAILHTI--C--LSDRTKWKAMREEESTHGTISKL---AQDGTARAKR 304
              T    R KEN +  L  +  C   + R++  A     +  G +  +   A++G+ + ++
Sbjct:   233 CTGSSLRIKENSVGALLNLARCGGAAARSEVAAAVASGADEGAMEGIVYVAENGSLKGRK 292

Query:   305 KATGILE 311
             KA  +L+
Sbjct:   293 KAVDLLK 299


>TAIR|locus:2012136 [details] [associations]
            symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
            ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
            Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
            GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
            HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
            EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
            RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
            SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
            KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
            PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
        Length = 421

 Score = 162 (62.1 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 85/339 (25%), Positives = 145/339 (42%)

Query:     1 MISQWC---RSQGIE-LPNSVQYINEEGITEADRDHFLSLLKKMSA------TLPDQTEA 50
             +I +WC   RS G+E +P   Q         AD     SLL + SA      ++  +  A
Sbjct:    76 LIQEWCVANRSNGVERIPTPKQ--------PADPISVRSLLSQASAITGTHVSVRSRAAA 127

Query:    51 AKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHD 110
              + LR L +     R L    H+A   L+  L        ++  L  + +  L+ L + +
Sbjct:   128 IRRLRGLARDSEKNRVLIA-GHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTE 186

Query:   111 NNKKLVAETPMVIPLLMDALRSGTIETRSNAAAAL-FTLS---ALDSNKEVIGKSGALKP 166
                + VA  P  +  +   L   +IE R NAAA +   L+   ++D    + G     + 
Sbjct:   187 TECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEG 246

Query:   167 LIDLLDEGHQS--AMKDVASAIFNLCITHENKARAVRDGGVSVILKKI---MDGVHVDEL 221
             ++DLL     S  A+K    AIF LC+  + +  A+  G   +++ ++    D    +  
Sbjct:   247 VLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERG 306

Query:   222 LAILAMLSTNHRAVEEIGDLG-GVSCMLR-IIRESTCDRNKENCIAILHTICLSDRTKWK 279
             LA + +L          G+    V  M++ I+R S  DR  E     L  +C ++    +
Sbjct:   307 LATVELLCRLPEGCAAFGEHALTVPLMVKTILRVS--DRATEYAAGALLALCTAE----E 360

Query:   280 AMREEESTHGTISKLA----QDGTARAKRKATGILERLK 314
               R+E +  G +++L      D T RAKRKA  +L+ L+
Sbjct:   361 RCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLR 399


>TAIR|locus:2116792 [details] [associations]
            symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
            GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
            ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
            PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
            UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
            EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
            KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
            InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
            Genevestigator:Q9SZ56 Uniprot:Q9SZ56
        Length = 518

 Score = 163 (62.4 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 81/277 (29%), Positives = 127/277 (45%)

Query:    50 AAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSI- 108
             AA E+RLL K     R        AIP L+S + +S+  +      Q   +  LLNL I 
Sbjct:   163 AASEVRLLAKEDSEARVTLAML-GAIPPLVSMIDDSRIVDA-----QIASLYALLNLGIG 216

Query:   109 HDNNKKLVAETPMVIPLL--MDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKP 166
             +D NK  + +   V  +L  +++  +   E      A    LSALDSNK +IG SGA+  
Sbjct:   217 NDANKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIF 276

Query:   167 LIDLL---DEGHQS-AMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELL 222
             L+  L   DE   S A +D   A++NL I   N +  +    ++ +L  + D + V E  
Sbjct:   277 LVKTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGD-MEVSE-- 333

Query:   223 AILAMLSTNHRAVEEIGDLGGVSC-----MLRIIRESTCDRNKENCIAILHTICLSDRTK 277
              ILA+LS N  AV E     G+ C     ++ ++  +     +E    IL  +       
Sbjct:   334 RILAILS-NLVAVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMAHKGYGD 392

Query:   278 WKAMREEESTHGTISKLAQDGTARAKRKATGILERLK 314
              + M E       + +L   G+A A+++A+ ILE L+
Sbjct:   393 RQVMIEA-GIESALLELTLLGSALAQKRASRILECLR 428


>UNIPROTKB|Q6K762 [details] [associations]
            symbol:PUB73 "U-box domain-containing protein 73"
            species:39947 "Oryza sativa Japonica Group" [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
            "protein ubiquitination" evidence=IDA] InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF04564 UniPathway:UPA00143 SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208 EMBL:CM000139
            GO:GO:0000151 EMBL:AP004864 EMBL:AK106789 RefSeq:NP_001046869.1
            UniGene:Os.54797 ProteinModelPortal:Q6K762 PRIDE:Q6K762
            EnsemblPlants:LOC_Os02g28870.1 GeneID:4329384
            KEGG:dosa:Os02t0490000-01 KEGG:osa:4329384 Gramene:Q6K762
            eggNOG:NOG240446 OMA:HLLRDMI ProtClustDB:CLSN2692738 Uniprot:Q6K762
        Length = 586

 Score = 157 (60.3 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 74/326 (22%), Positives = 145/326 (44%)

Query:     1 MISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKR 60
             MIS WC       P++        +  ++ +    +LK  S     Q EA K ++LLTK 
Sbjct:   247 MISAWCLDHSDLSPSTTSDTPSTPLEPSEEEQIQRILKLFSGNSASQREALKLIQLLTKT 306

Query:    61 MPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVA-ET 119
                 +    +  D IP L++     K ++    +L+E+ +T +LNL++H  N++++A + 
Sbjct:   307 TKGVQPCLAKYADIIPVLIN--LRRKYKSSWTQDLEEERLTIILNLTMHRQNREILAGQN 364

Query:   120 PMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGK----SGALKPLIDLLDEGH 175
              +   +     ++G    R+++ A + ++ A+ S  ++  K    +G +K L  +L    
Sbjct:   365 ELAGAIKKIVKKAGNRGKRTSSLAKVASIVAVLSEFDMFRKRMLDAGGMKMLRGMLKIKD 424

Query:   176 QSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAV 235
                + + A+AI  L    E +  A R   V  +L +    +  D +L +L  L  + R  
Sbjct:   425 TEVITEAATAILALYADGEGEQPA-RFHEVPQMLLECH--MFTDGILLLLDRLPKSPRVF 481

Query:   236 EEIGD--LGGVSCMLRIIRESTCDRNKE-NCIAILHTICLSDRTKWKAMREEESTHGTIS 292
              +I D  L  V+ ++         R    + I++++ I   D  K  A++  E     I 
Sbjct:   482 RKICDQALQLVNIVMAEDASGPVTRKGILSAISLIYEIVERDVGKMNAVKNMEDF---IE 538

Query:   293 KLAQDGTARAKRKATGILERLKRTVN 318
             +L Q  + R   +    +ER+ RT++
Sbjct:   539 RLRQLSSDRLPMQKMLQVERIIRTLS 564


>SGD|S000000739 [details] [associations]
            symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
            membrane protein" species:4932 "Saccharomyces cerevisiae"
            [GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
            [GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
            "nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
            "nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
            inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
            evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
            [GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
            [GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
            [GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
            evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
            [GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
            InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
            SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
            GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
            EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
            KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
            KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
            HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
            EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
            DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
            PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
            NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
            GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
        Length = 578

 Score = 153 (58.9 bits), Expect = 5.8e-08, P = 5.8e-08
 Identities = 35/118 (29%), Positives = 58/118 (49%)

Query:    92 NPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSAL 151
             +P +Q      L NL++++ NK L+ E   + PL+ + +    +E + NA   +  L+  
Sbjct:    98 DPQIQVAACAALGNLAVNNENKLLIVEMGGLEPLI-NQMMGDNVEVQCNAVGCITNLATR 156

Query:   152 DSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVIL 209
             D NK  I  SGAL PL  L    H    ++   A+ N+  + EN+   V  G V V++
Sbjct:   157 DDNKHKIATSGALIPLTKLAKSKHIRVQRNATGALLNMTHSEENRKELVNAGAVPVLV 214

 Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
 Identities = 42/172 (24%), Positives = 83/172 (48%)

Query:    90 GINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLS 149
             G N  +Q + +  + NL+  D+NK  +A +  +IPL   A +S  I  + NA  AL  ++
Sbjct:   137 GDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLA-KSKHIRVQRNATGALLNMT 195

Query:   150 ALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKAR-AVRDGGVSVI 208
               + N++ +  +GA+  L+ LL            +A+ N+ +   N+ + A  +  +   
Sbjct:   196 HSEENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSK 255

Query:   209 LKKIMDG----VHVDELLAILAMLS-TNHRAVEEIGDLGGVSCMLRIIREST 255
             L  +MD     V     LA+  + S T+++   EI   GG+  ++++I+  +
Sbjct:   256 LVSLMDSPSSRVKCQATLALRNLASDTSYQL--EIVRAGGLPHLVKLIQSDS 305

 Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
 Identities = 47/193 (24%), Positives = 86/193 (44%)

Query:   124 PLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVA 183
             P+L+  L+S   + +  A AAL  L+  + NK +I + G L+PLI+ +   +     +  
Sbjct:    89 PILI-LLQSQDPQIQVAACAALGNLAVNNENKLLIVEMGGLEPLINQMMGDNVEVQCNAV 147

Query:   184 SAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVD-ELLAILAMLSTNHRAV--EEIGD 240
               I NL    +NK +    G + + L K+    H+  +  A  A+L+  H     +E+ +
Sbjct:   148 GCITNLATRDDNKHKIATSGAL-IPLTKLAKSKHIRVQRNATGALLNMTHSEENRKELVN 206

Query:   241 LGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTA 300
              G V  ++ ++  ST    +  C   L  I + +  + K  + E      +  L    ++
Sbjct:   207 AGAVPVLVSLL-SSTDPDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSS 265

Query:   301 RAKRKATGILERL 313
             R K +AT  L  L
Sbjct:   266 RVKCQATLALRNL 278


>TAIR|locus:2090604 [details] [associations]
            symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
            ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
            evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
            SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
            GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
            HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
            EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
            ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
            GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
            InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
            ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
        Length = 421

 Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 78/335 (23%), Positives = 141/335 (42%)

Query:     1 MISQWC---RSQGIE-LPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRL 56
             +I +WC   RS G+E +P   Q  +   +         S +     ++  +  A + LR 
Sbjct:    77 LIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQ--ASAITGTHVSVRSRAAALRRLRG 134

Query:    57 LTKRMPSFRALFGESHDAIPQLLSPL-SESKCENGINPNLQEDVITTLLNLSIHDNNKKL 115
               +     R L   +H+A   L+  L SE+      +  L  + +  L+ L I + N+ +
Sbjct:   135 FARDSDKNRVLIA-AHNATEILIKILFSETT-----SSELVSESLALLVMLPITEPNQFV 188

Query:   116 -VAETPMVIPLLMDALRSGTIETRSNAAAALFTLS----ALDSNKEVIGKSGALKPLIDL 170
              ++  P  +  L   L   +IETR NAAA +  +S    + D    +       + ++DL
Sbjct:   189 SISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLDL 248

Query:   171 LDEGHQS--AMKDVASAIFNLCITHENKARAVRDGGVSVILKKI---MDGVHVDELLAIL 225
             L     S  A+K     +F LC     +  A+  G   +++ ++    D    +  LA +
Sbjct:   249 LRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATV 308

Query:   226 AMLSTNHRAVEEIGDLG-GVSCMLR-IIRESTCDRNKENCIAILHTICLSDRTKWKAMRE 283
              +L          G+    V  +++ I+R S  DR  E     L  +C ++  +W   RE
Sbjct:   309 ELLCRTPEGCAAFGEHALTVPLLVKTILRVS--DRATEYAAGALLALCTAEE-RW---RE 362

Query:   284 EESTHGTISKLA----QDGTARAKRKATGILERLK 314
             E +  G + +L      + T RAK+KA  +L+ L+
Sbjct:   363 EAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLR 397


>TAIR|locus:2010424 [details] [associations]
            symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
            thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
            evidence=IEA] [GO:0016567 "protein ubiquitination"
            evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
            [GO:0070696 "transmembrane receptor protein serine/threonine kinase
            binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
            UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
            HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
            IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
            ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
            EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
            TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
            InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
            ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
        Length = 768

 Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
 Identities = 74/307 (24%), Positives = 136/307 (44%)

Query:    22 EEGITEADR-DHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLS 80
             E+ +T  +R    L+ L  +  TL  +    +++R+L K     R L GE+   +  LL 
Sbjct:   414 EDQVTLVERCTELLTTLTDVD-TLRKKCRVVEQIRVLLKDDEEARILMGEN-GCVEALLQ 471

Query:    81 PLSESKCENGINPNLQEDVITTLLNLSIHDN-NKKLVAETPMVIPLLMDALRSGTIETRS 139
              L  +  EN  N + Q+     L NL++ +N NK+L+  +  +IPLL + L +    +  
Sbjct:   472 FLGSALNEN--NASAQKVGAMALFNLAVDNNRNKELMLASG-IIPLLEEMLCNP--HSHG 526

Query:   140 NAAAALFTLSALDSNKEVIGKSGALKPLIDLL-DEGHQSAMKDVASAIFNLCITHENKAR 198
             +  A    LS L+  K VIG S A+  +++LL  E       D   ++F+L     N   
Sbjct:   527 SVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPC 586

Query:   199 AVRDGGVSVILK-KIMDGVH-VDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTC 256
              +    V+ +    I D     ++ LA+L  L  N    +E+     +   L  I ++  
Sbjct:   587 LLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGE 646

Query:   257 DRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLK-- 314
                +E  +++L  +C       + + +E      +S ++ +GT R + +A  +L   +  
Sbjct:   647 PNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVS-ISVNGTQRGRERAQKLLTLFREL 705

Query:   315 RTVNLTH 321
             R  + TH
Sbjct:   706 RQRDQTH 712


>ASPGD|ASPL0000008980 [details] [associations]
            symbol:AN12408 species:162425 "Emericella nidulans"
            [GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
            [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
            "molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
            evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
            InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
            EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
            PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
            GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
            ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
            Uniprot:C8V2Y6
        Length = 579

 Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 62/243 (25%), Positives = 108/243 (44%)

Query:    20 INEEGITEADRDHFLSLLKKM-SATLPDQTEAAKELRLLTKRMPS--FRALFGESHDAIP 76
             I E  + E DRD    +L  + S+ +  Q  A+  L  L     +       G     I 
Sbjct:    95 ITERDVREVDRDTLEPILFLLQSSDIEVQRAASAALGNLAVNADNKVLIVALGGLAPLIK 154

Query:    77 QLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIE 136
             Q++SP  E +C N +        IT   NL+ H++NK  +A +  + PL+  A +S  + 
Sbjct:   155 QMMSPNVEVQC-NAVG------CIT---NLATHEDNKAKIARSGALGPLIRLA-KSKDMR 203

Query:   137 TRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENK 196
              + NA  AL  ++  D N++ +  +GA+  L+ LL            +A+ N+ +   N+
Sbjct:   204 VQRNATGALLNMTHSDDNRQQLVNAGAIPVLVQLLSSSDVDVQYYCTTALSNIAVDASNR 263

Query:   197 AR-AVRDGGVSVILKKIMDG----VHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRII 251
              R A  +  +   L  +MD     V     LA L  L+++ +   EI    G+  +LR++
Sbjct:   264 KRLAQTESRLVQSLVHLMDSSTPKVQCQAALA-LRNLASDEKYQLEIVRAKGLPPLLRLL 322

Query:   252 RES 254
             + S
Sbjct:   323 QSS 325


>CGD|CAL0001835 [details] [associations]
            symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
            "vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
            evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
            [GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
            [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
            "Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
            "nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
            anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
            stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
            evidence=IMP] [GO:0036180 "filamentous growth of a population of
            unicellular organisms in response to biotic stimulus" evidence=IMP]
            [GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
            [GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
            "vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
            "macroautophagy" evidence=IEA] InterPro:IPR000225
            InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
            CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
            GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
            EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
            RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
            GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
            KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
        Length = 585

 Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 42/144 (29%), Positives = 66/144 (45%)

Query:    95 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 154
             +Q      L NL+++  NK L+ E   + PL+   + S  IE + NA   +  L+  D N
Sbjct:   103 VQRAACGALGNLAVNTENKILIVEMGGLEPLIRQMM-STNIEVQCNAVGCITNLATQDDN 161

Query:   155 KEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD 214
             K  I KSGAL PL  L         ++   A+ N+  + EN+   V  G V V++  ++ 
Sbjct:   162 KSKIAKSGALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLVS-LLS 220

Query:   215 GVHVDELLAILAMLSTNHRAVEEI 238
                 D        LS  + AV+E+
Sbjct:   221 NEDADVQYYCTTALS--NIAVDEV 242

 Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
 Identities = 45/184 (24%), Positives = 84/184 (45%)

Query:    79 LSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETR 138
             L PL        I   +Q + +  + NL+  D+NK  +A++  +IPL   A +S  I  +
Sbjct:   130 LEPLIRQMMSTNIE--VQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLA-KSKDIRVQ 186

Query:   139 SNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKAR 198
              NA  AL  ++    N++ +  +GA+  L+ LL            +A+ N+ +   N+ +
Sbjct:   187 RNATGALLNMTHSGENRQELVNAGAVPVLVSLLSNEDADVQYYCTTALSNIAVDEVNRKK 246

Query:   199 -AVRDGGVSVILKKIMDG----VHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRE 253
              A  +  +   L  +MD     V     LA+  + S +   VE I   GG+  +++++  
Sbjct:   247 LASTEPKLVGQLVHLMDSPSPRVQCQATLALRNLASDSGYQVE-IVRAGGLPHLVQLL-- 303

Query:   254 STCD 257
              TC+
Sbjct:   304 -TCN 306


>UNIPROTKB|Q59MN0 [details] [associations]
            symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
            albicans SC5314" [GO:0000011 "vacuole inheritance"
            evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
            [GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
            growth" evidence=IMP] [GO:0036180 "filamentous growth of a
            population of unicellular organisms in response to biotic stimulus"
            evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
            evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
            InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
            GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
            GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
            EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
            ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
            GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
            PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
        Length = 585

 Score = 140 (54.3 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 42/144 (29%), Positives = 66/144 (45%)

Query:    95 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 154
             +Q      L NL+++  NK L+ E   + PL+   + S  IE + NA   +  L+  D N
Sbjct:   103 VQRAACGALGNLAVNTENKILIVEMGGLEPLIRQMM-STNIEVQCNAVGCITNLATQDDN 161

Query:   155 KEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD 214
             K  I KSGAL PL  L         ++   A+ N+  + EN+   V  G V V++  ++ 
Sbjct:   162 KSKIAKSGALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLVS-LLS 220

Query:   215 GVHVDELLAILAMLSTNHRAVEEI 238
                 D        LS  + AV+E+
Sbjct:   221 NEDADVQYYCTTALS--NIAVDEV 242

 Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00062
 Identities = 45/184 (24%), Positives = 84/184 (45%)

Query:    79 LSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETR 138
             L PL        I   +Q + +  + NL+  D+NK  +A++  +IPL   A +S  I  +
Sbjct:   130 LEPLIRQMMSTNIE--VQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLA-KSKDIRVQ 186

Query:   139 SNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKAR 198
              NA  AL  ++    N++ +  +GA+  L+ LL            +A+ N+ +   N+ +
Sbjct:   187 RNATGALLNMTHSGENRQELVNAGAVPVLVSLLSNEDADVQYYCTTALSNIAVDEVNRKK 246

Query:   199 -AVRDGGVSVILKKIMDG----VHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRE 253
              A  +  +   L  +MD     V     LA+  + S +   VE I   GG+  +++++  
Sbjct:   247 LASTEPKLVGQLVHLMDSPSPRVQCQATLALRNLASDSGYQVE-IVRAGGLPHLVQLL-- 303

Query:   254 STCD 257
              TC+
Sbjct:   304 -TCN 306


>TAIR|locus:2103351 [details] [associations]
            symbol:ARABIDILLO-2 "AT3G60350" species:3702 "Arabidopsis
            thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0048527 "lateral root development" evidence=IGI;IMP]
            InterPro:IPR000225 InterPro:IPR001810 InterPro:IPR016024
            Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181 SMART:SM00185
            SMART:SM00256 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048527
            HSSP:Q02248 eggNOG:NOG48141 HOGENOM:HOG000029512
            ProtClustDB:CLSN2685043 EMBL:AL138646 IPI:IPI00537320 PIR:T47846
            RefSeq:NP_191594.1 UniGene:At.48788 UniGene:At.63623
            ProteinModelPortal:Q9M224 SMR:Q9M224 PRIDE:Q9M224
            EnsemblPlants:AT3G60350.1 GeneID:825206 KEGG:ath:AT3G60350
            TAIR:At3g60350 InParanoid:Q9M224 OMA:RTTIDHI PhylomeDB:Q9M224
            Genevestigator:Q9M224 Uniprot:Q9M224
        Length = 928

 Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 58/223 (26%), Positives = 97/223 (43%)

Query:    25 ITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSF--RALFGESHDAIPQLLSPL 82
             +  A   H L +L +       Q +AA+ L  L     S    A  G+   A+  L+  L
Sbjct:   551 VARAGGVHALVMLARNCKYEGAQEQAARALANLAAHGDSNGNNAAVGQEAGALEALVQ-L 609

Query:    83 SESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIET--RSN 140
             ++S  E G+    +++    L NL+  D N++ +A    V  L+  A  S    T  +  
Sbjct:   610 TQSPHE-GV----KQEAAGALWNLAFDDKNRESIAAFGGVEALVALAKSSSNASTGLQER 664

Query:   141 AAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAV 200
              A AL+ LS  ++N   IG  G + PLI L+    +   +  A A++NL     N  R V
Sbjct:   665 VAGALWGLSVSEANSIAIGHEGGIPPLIALVRSEAEDVHETAAGALWNLSFNPGNALRIV 724

Query:   201 RDGGVSVILKKIMDGVH-VDELLAILAMLSTNHRAVEEIGDLG 242
              +GGV  +++     V  +   +A LA+       ++E   +G
Sbjct:   725 EEGGVVALVQLCSSSVSKMARFMAALALAYMFDGRMDEYAMIG 767

 Score = 127 (49.8 bits), Expect = 0.00044, Sum P(2) = 0.00043
 Identities = 53/235 (22%), Positives = 98/235 (41%)

Query:    94 NLQEDVITTLLNLSIHDNNKKLV----AETPMV---IPLLMDALRSGTIETRSNAAAALF 146
             ++QE   T L    + D+    +    AE  M    I LL++  +S     +S AA A+ 
Sbjct:   395 DVQERAATGLATFIVVDDENASIDCGRAEAVMRDGGIRLLLELAKSWREGLQSEAAKAIA 454

Query:   147 TLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVS 206
              LS      + + + G +  L DL    ++   ++ A  ++NL +  E+K    + GGV+
Sbjct:   455 NLSVNAKVAKAVAEEGGISVLADLAKSMNRLVAEEAAGGLWNLSVGEEHKNAIAQAGGVN 514

Query:   207 VILKKIM------DGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNK 260
              ++  I       DGV ++     LA L+ + +   E+   GGV  ++ + R    +  +
Sbjct:   515 ALVDLIFRWPHGCDGV-LERAAGALANLAADDKCSMEVARAGGVHALVMLARNCKYEGAQ 573

Query:   261 ENCIAILHTICLSDRTKWK--AMREEESTHGTISKLAQDGTARAKRKATGILERL 313
             E     L  +     +     A+ +E      + +L Q      K++A G L  L
Sbjct:   574 EQAARALANLAAHGDSNGNNAAVGQEAGALEALVQLTQSPHEGVKQEAAGALWNL 628

 Score = 37 (18.1 bits), Expect = 0.00044, Sum P(2) = 0.00043
 Identities = 9/53 (16%), Positives = 25/53 (47%)

Query:     4 QWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRL 56
             Q  R +G++  +++ ++    + E   D+   +     + +  + EA + L+L
Sbjct:   106 QKIRFRGVDSADAIIHLKARSLLEISGDYCRKITDATLSMIAARHEALESLQL 158


>TAIR|locus:2056529 [details] [associations]
            symbol:AT2G05810 "AT2G05810" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 SMART:SM00185
            EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC006555 EMBL:AY099770
            EMBL:BT015173 IPI:IPI00537341 PIR:F84471 RefSeq:NP_178638.1
            RefSeq:NP_849939.1 UniGene:At.13408 UniGene:At.75216
            ProteinModelPortal:Q8S8G1 SMR:Q8S8G1 EnsemblPlants:AT2G05810.1
            EnsemblPlants:AT2G05810.2 GeneID:815132 KEGG:ath:AT2G05810
            TAIR:At2g05810 eggNOG:NOG247895 HOGENOM:HOG000243018
            InParanoid:Q8S8G1 OMA:WSQNPLL PhylomeDB:Q8S8G1
            ProtClustDB:CLSN2683236 ArrayExpress:Q8S8G1 Genevestigator:Q8S8G1
            Uniprot:Q8S8G1
        Length = 580

 Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 49/228 (21%), Positives = 107/228 (46%)

Query:    92 NPNLQEDVIT--TLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLS 149
             +P ++E  +   +LL  S  D+ +K V E   + PLL   L +G+   ++ AA A+  ++
Sbjct:   215 HPLIREHALAAVSLLTSSSADS-RKTVFEQGGLGPLLR-LLETGSSPFKTRAAIAIEAIT 272

Query:   150 ALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVIL 209
             A  +    I   G +  LI+    G +   + +A AI N+    E +     +G + V++
Sbjct:   273 ADPATAWAISAYGGVTVLIEACRSGSKQVQEHIAGAISNIAAVEEIRTTLAEEGAIPVLI 332

Query:   210 KKIMDGVH-VDELLA-ILAMLSTNHRAVEE--IGDLGGVSCMLRIIRESTCDRNKENCIA 265
             + ++ G   V E  A  ++++S++     +  + + GG+  ++ +++ES+     E+C+ 
Sbjct:   333 QLLISGSSSVQEKTANFISLISSSGEYYRDLIVRERGGLQILIHLVQESSNPDTIEHCLL 392

Query:   266 ILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERL 313
              L  I   + T  + +         + +L + G    ++ +T +L  L
Sbjct:   393 ALSQISAME-TVSRVLSSSTRFIIRLGELIKHGNVILQQISTSLLSNL 439


>TAIR|locus:2055033 [details] [associations]
            symbol:ARABIDILLO-1 "AT2G44900" species:3702 "Arabidopsis
            thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0048527
            "lateral root development" evidence=IGI;IMP] [GO:0005515 "protein
            binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR001810
            InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181
            SMART:SM00185 SMART:SM00256 GO:GO:0005634 EMBL:CP002685
            GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0048527 EMBL:AC002388 IPI:IPI00521082
            PIR:T00403 RefSeq:NP_566029.1 UniGene:At.53128 HSSP:Q02248
            ProteinModelPortal:O22161 SMR:O22161 PaxDb:O22161 PRIDE:O22161
            EnsemblPlants:AT2G44900.1 GeneID:819099 KEGG:ath:AT2G44900
            TAIR:At2g44900 eggNOG:NOG48141 HOGENOM:HOG000029512
            InParanoid:O22161 OMA:MDDESAN PhylomeDB:O22161
            ProtClustDB:CLSN2685043 Genevestigator:O22161 Uniprot:O22161
        Length = 930

 Score = 139 (54.0 bits), Expect = 4.1e-06, P = 4.1e-06
 Identities = 56/208 (26%), Positives = 92/208 (44%)

Query:    25 ITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFR--ALFGESHDAIPQLLSPL 82
             + +A   H L +L +       Q +AA+ L  L     S    A  G+   A+  L+  L
Sbjct:   560 VAKAGGVHALVMLARNCKYEGVQEQAARALANLAAHGDSNNNNAAVGQEAGALEALVQ-L 618

Query:    83 SESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIET--RSN 140
             ++S  E G+    +++    L NLS  D N++ ++    V  L+  A       T  +  
Sbjct:   619 TKSPHE-GV----RQEAAGALWNLSFDDKNRESISVAGGVEALVALAQSCSNASTGLQER 673

Query:   141 AAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAV 200
             AA AL+ LS  ++N   IG+ G + PLI L     +   +  A A++NL     N  R V
Sbjct:   674 AAGALWGLSVSEANSVAIGREGGVPPLIALARSEAEDVHETAAGALWNLAFNPGNALRIV 733

Query:   201 RDGGVSVILKKIMDGVH-VDELLAILAM 227
              +GGV  ++      V  +   +A LA+
Sbjct:   734 EEGGVPALVHLCSSSVSKMARFMAALAL 761


>POMBASE|SPBC354.14c [details] [associations]
            symbol:vac8 "vacuolar protein Vac8 (predicted)"
            species:4896 "Schizosaccharomyces pombe" [GO:0000011 "vacuole
            inheritance" evidence=ISO] [GO:0000139 "Golgi membrane"
            evidence=IEA] [GO:0000324 "fungal-type vacuole" evidence=ISO]
            [GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016236
            "macroautophagy" evidence=ISO] [GO:0042144 "vacuole fusion,
            non-autophagic" evidence=ISO] [GO:0043234 "protein complex"
            evidence=NAS] [GO:0043495 "protein anchor" evidence=ISO]
            [GO:0071255 "CVT vesicle assembly" evidence=ISO] InterPro:IPR000225
            InterPro:IPR016024 InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176
            SMART:SM00185 PomBase:SPBC354.14c GO:GO:0005794 GO:GO:0043234
            GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG5064
            GO:GO:0000329 GO:GO:0043495 GO:GO:0000011 HSSP:Q02248 GO:GO:0016236
            GO:GO:0042144 KO:K08332 PANTHER:PTHR23315:SF8 PIR:T40294
            RefSeq:NP_595238.1 ProteinModelPortal:O43028 STRING:O43028
            EnsemblFungi:SPBC354.14c.1 GeneID:2541010 KEGG:spo:SPBC354.14c
            HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 NextBio:20802124
            GO:GO:0071255 Uniprot:O43028
        Length = 550

 Score = 134 (52.2 bits), Expect = 7.2e-06, P = 7.2e-06
 Identities = 34/115 (29%), Positives = 57/115 (49%)

Query:    95 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 154
             +Q      L NL+++  NK LV +    + LL+  + S  +E + NA   +  L+ LD N
Sbjct:   101 IQRAASVALGNLAVNAENKALVVKLNG-LDLLIRQMMSPHVEVQCNAVGCITNLATLDEN 159

Query:   155 KEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVIL 209
             K  I  SGAL PL  L         ++   A+ N+  ++EN+ + V  G + V++
Sbjct:   160 KSKIAHSGALGPLTRLAKSKDIRVQRNATGALLNMTHSYENRQQLVSAGTIPVLV 214


>TAIR|locus:2198235 [details] [associations]
            symbol:AT1G01830 "AT1G01830" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
            SMART:SM00185 EMBL:CP002684 GenomeReviews:CT485782_GR
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            eggNOG:NOG268795 HOGENOM:HOG000239669 ProtClustDB:CLSN2683369
            EMBL:AY059739 EMBL:AY091273 IPI:IPI00535901 RefSeq:NP_001077443.1
            RefSeq:NP_001077444.1 RefSeq:NP_563637.1 UniGene:At.26641
            ProteinModelPortal:Q93YW3 SMR:Q93YW3 EnsemblPlants:AT1G01830.1
            EnsemblPlants:AT1G01830.2 EnsemblPlants:AT1G01830.3 GeneID:839264
            KEGG:ath:AT1G01830 TAIR:At1g01830 InParanoid:Q93YW3 OMA:GHLESKH
            PhylomeDB:Q93YW3 ArrayExpress:Q93YW3 Genevestigator:Q93YW3
            Uniprot:Q93YW3
        Length = 574

 Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 54/189 (28%), Positives = 87/189 (46%)

Query:    67 LFGESH-DAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPL 125
             L G ++  A+ QLL+  S    E  +N       + ++L  S H + + L++E   V+P 
Sbjct:   206 LIGRANVAALVQLLTATSTRIREKAVN-------LISVLAESGHCD-EWLISEG--VLPP 255

Query:   126 LMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASA 185
             L+  + SG++ET+  AA A+  LS  + N   I   G + PLIDL   G   +    A+A
Sbjct:   256 LVRLIESGSLETKEKAAIAIQRLSMTEENAREIAGHGGITPLIDLCKTGDSVSQAASAAA 315

Query:   186 IFNLCITHENKARAVRDGGVSVILKKIMDGV------HVDELLAILAMLSTNHRAVEEIG 239
             + N+    E +     +G + V +  +  G+      H+ E L  L   S   R  E I 
Sbjct:   316 LKNMSAVSELRQLLAEEGIIRVSIDLLNHGILLGSREHMAECLQNLTAASDALR--EAIV 373

Query:   240 DLGGVSCML 248
               GGV  +L
Sbjct:   374 SEGGVPSLL 382

 Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
 Identities = 50/196 (25%), Positives = 82/196 (41%)

Query:    18 QYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQ 77
             Q + EEGI     D     L      L  +   A+ L+ LT    + R     S   +P 
Sbjct:   327 QLLAEEGIIRVSID-----LLNHGILLGSREHMAECLQNLTAASDALREAI-VSEGGVPS 380

Query:    78 LLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIET 137
             LL+ L          P  Q+  +T L NL    N +  VA    ++P L   L+SG++  
Sbjct:   381 LLAYLD--------GPLPQQPAVTALRNLIPSVNPEIWVALN--LLPRLRHVLKSGSLGA 430

Query:   138 RSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKA 197
             +  AA+A+   +     K ++G+SG +  ++ LL+       +  A AI  L +      
Sbjct:   431 QQAAASAICRFACSPETKRLVGESGCIPEIVKLLESKSNGCREAAAQAIAGL-VAEGRIR 489

Query:   198 RAVRDGGVSVILKKIM 213
             R ++  G SV+   +M
Sbjct:   490 RELKKDGKSVLTNLVM 505


>UNIPROTKB|Q7Z5J8 [details] [associations]
            symbol:ANKAR "Ankyrin and armadillo repeat-containing
            protein" species:9606 "Homo sapiens" [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR000225 InterPro:IPR002110
            InterPro:IPR016024 Pfam:PF00023 Pfam:PF00514 PROSITE:PS50088
            PROSITE:PS50176 SMART:SM00185 SMART:SM00248 GO:GO:0016021
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
            PROSITE:PS50297 EMBL:AK126073 EMBL:AC012488 EMBL:AC013468
            EMBL:BC044907 EMBL:BC047413 EMBL:AJ549812 IPI:IPI00374192
            IPI:IPI00845277 IPI:IPI00845337 IPI:IPI00845352 RefSeq:NP_653309.3
            UniGene:Hs.60772 UniGene:Hs.655700 ProteinModelPortal:Q7Z5J8
            SMR:Q7Z5J8 IntAct:Q7Z5J8 STRING:Q7Z5J8 PhosphoSite:Q7Z5J8
            DMDM:308153635 PRIDE:Q7Z5J8 Ensembl:ENST00000281412
            Ensembl:ENST00000313581 Ensembl:ENST00000438402
            Ensembl:ENST00000441800 Ensembl:ENST00000520309 GeneID:150709
            KEGG:hsa:150709 UCSC:uc002uqw.2 CTD:150709 GeneCards:GC02P190539
            H-InvDB:HIX0002670 HGNC:HGNC:26350 HPA:HPA036168 MIM:609803
            neXtProt:NX_Q7Z5J8 PharmGKB:PA145149868 eggNOG:NOG116057
            HOGENOM:HOG000007170 HOVERGEN:HBG106658 InParanoid:Q7Z5J8
            OMA:HGGIEFD GenomeRNAi:150709 NextBio:86508 ArrayExpress:Q7Z5J8
            Bgee:Q7Z5J8 CleanEx:HS_ANKAR Genevestigator:Q7Z5J8 Uniprot:Q7Z5J8
        Length = 1434

 Score = 131 (51.2 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 52/217 (23%), Positives = 103/217 (47%)

Query:    75 IPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGT 134
             IP L++ L  SK +      LQ   +  L N+S H +    + E    IP L++ L    
Sbjct:   744 IPALINLLKSSKIK------LQCKTVGLLSNISTHKSAVHALVEAGG-IPSLINLLVCDE 796

Query:   135 IETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHE 194
              E  S  A  L+ ++  + NK+VI K   +  LI+LL+   ++ + +V + I  LCI +E
Sbjct:   797 PEVHSRCAVILYDIAQCE-NKDVIAKYNGIPSLINLLNLNIENVLVNVMNCIRVLCIGNE 855

Query:   195 NKARAVRDG-GVSVILKKIMDGVHVDELL--AILAMLSTNHRAVEE-IGDLGGVSCMLRI 250
             N  RAVR+  G+  +++ +     V + +  A +A +  +++ +++ I   G +  ++ +
Sbjct:   856 NNQRAVREHKGLPYLIRFLSSDSDVLKAVSSAAIAEVGRDNKEIQDAIAMEGAIPPLVAL 915

Query:   251 IRESTCDRNKENCIAILHTICLSDRTKWKAMREEEST 287
              +        +  +A+  ++   +    KA  E+  T
Sbjct:   916 FKGKQISVQMKGAMAV-ESLASHNALIQKAFLEKSLT 951


>TAIR|locus:2204700 [details] [associations]
            symbol:AT1G77460 "AT1G77460" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000225
            InterPro:IPR000008 InterPro:IPR008973 InterPro:IPR016024
            Pfam:PF00168 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
            SMART:SM00239 EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 InterPro:IPR018029 SUPFAM:SSF49562
            PROSITE:PS50004 IPI:IPI00548388 RefSeq:NP_001185419.1
            RefSeq:NP_177870.2 UniGene:At.34473 PRIDE:F4I718
            EnsemblPlants:AT1G77460.1 EnsemblPlants:AT1G77460.2 GeneID:844082
            KEGG:ath:AT1G77460 OMA:VAPSKEC Uniprot:F4I718
        Length = 2136

 Score = 132 (51.5 bits), Expect = 6.4e-05, P = 6.4e-05
 Identities = 67/275 (24%), Positives = 123/275 (44%)

Query:    36 LLKKMSA-TLPDQTEAAKELRLL--TKRMPSFRALFGESHDAIPQLLSPLSESKCENGIN 92
             L++++ A T   Q +     RLL   K     R L G    A+P  +S L      NG  
Sbjct:    42 LIEQLHAKTSSPQDKELTTARLLGIAKGKREARRLIGSYGQAMPLFISML-----RNGTT 96

Query:    93 PNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALD 152
               L +  + ++L +   D + +L       IP L+  L+SGT+ETR  AA A++ +S+  
Sbjct:    97 --LAKVNVASILCVLCKDKDLRLKVLLGGCIPPLLSVLKSGTMETRKAAAEAIYEVSSAG 154

Query:   153 SNKEVIGKS-----GALKPLIDLLD-EGHQSAMKD--VASAIFNLCITHENKARAVRDG- 203
              + + IG       G +  L D L  +G+Q  + +  V  A+ NLC   +   R   +G 
Sbjct:   155 ISNDHIGMKIFITEGVVPTLWDQLSLKGNQDKVVEGYVTGALRNLCGVDDGYWRLTLEGS 214

Query:   204 GVSVILKKIM-DGVHVDELLA-ILAMLSTNH-RAVEEIGDLGGVSCMLRIIRESTCDRNK 260
             GV +++  +  D  +     A +LA L  +   ++++I + G V  +++++ +      +
Sbjct:   215 GVDIVVSLLSSDNPNSQANAASLLARLVLSFCDSIQKILNSGVVKSLIQLLEQKNDINVR 274

Query:   261 ENCIAILHTICL-SDRTKWKAMREEESTHGTISKL 294
              +    L  +   SD  K K +++    H  I  +
Sbjct:   275 ASAADALEALSANSDEAK-KCVKDAGGVHALIEAI 308


>TAIR|locus:2157358 [details] [associations]
            symbol:AT5G50900 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000225
            InterPro:IPR016024 SMART:SM00185 EMBL:CP002688 SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AB017063 EMBL:BT020588
            EMBL:BT033035 IPI:IPI00519624 RefSeq:NP_199903.1 UniGene:At.25502
            ProteinModelPortal:Q9FI58 SMR:Q9FI58 PRIDE:Q9FI58
            EnsemblPlants:AT5G50900.1 GeneID:835162 KEGG:ath:AT5G50900
            TAIR:At5g50900 InParanoid:Q9FI58 OMA:NFVEENA PhylomeDB:Q9FI58
            ProtClustDB:CLSN2687203 Genevestigator:Q9FI58 Uniprot:Q9FI58
        Length = 555

 Score = 125 (49.1 bits), Expect = 7.4e-05, P = 7.4e-05
 Identities = 39/182 (21%), Positives = 81/182 (44%)

Query:    95 LQEDVITTLLNLSIHDNNKK-LVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDS 153
             ++E  +  +  +S+ +++K  L+AE   ++  L+  L SG+   +  A  AL  LS    
Sbjct:   202 MKEKTVAVISRISMVESSKHVLIAEGLSLLNHLLRVLESGSGFAKEKACVALQALSLSKE 261

Query:   154 NKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIM 213
             N   IG  G +  L+++   G   +    A  + NL +  E K   V +  + V++  + 
Sbjct:   262 NARAIGCRGGISSLLEICQGGSPGSQAFAAGVLRNLALFGETKENFVEENAIFVLISMVS 321

Query:   214 DGVHVDELLAI--LAMLSTNHRAVE-EIGDLGGVSCMLRIIRESTCDRNKENCIAILHTI 270
              G  + +  A+  LA L++    +   +   GG+ C+       +  ++ E  + +L  +
Sbjct:   322 SGTSLAQENAVGCLANLTSGDEDLMISVVREGGIQCLKSFWDSVSSVKSLEVGVVLLKNL 381

Query:   271 CL 272
              L
Sbjct:   382 AL 383


>TAIR|locus:2025497 [details] [associations]
            symbol:ARK2 "armadillo repeat kinesin 2" species:3702
            "Arabidopsis thaliana" [GO:0003777 "microtubule motor activity"
            evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0007018 "microtubule-based movement" evidence=IEA] [GO:0048364
            "root development" evidence=IMP] InterPro:IPR000225
            InterPro:IPR001752 InterPro:IPR016024 InterPro:IPR019821
            Pfam:PF00225 Pfam:PF00514 PRINTS:PR00380 PROSITE:PS00411
            PROSITE:PS50067 PROSITE:PS50176 SMART:SM00129 SMART:SM00185
            EMBL:CP002684 GO:GO:0005524 GO:GO:0005875 SUPFAM:SSF48371
            Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048364 GO:GO:0005874
            GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 UniGene:At.17002
            UniGene:At.66839 IPI:IPI00938676 RefSeq:NP_001154301.1
            ProteinModelPortal:F4HU83 SMR:F4HU83 PRIDE:F4HU83
            EnsemblPlants:AT1G01950.3 GeneID:839306 KEGG:ath:AT1G01950
            OMA:IMVRSME Uniprot:F4HU83
        Length = 915

 Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
 Identities = 45/153 (29%), Positives = 73/153 (47%)

Query:    94 NLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIET-RSNAAAALFTLSALD 152
             N++   +  + NL+  + N++ + E   +  LLM  LRS   ET R  AA A+  L+  +
Sbjct:   672 NIRIHAVKVVANLAAEEANQEKIVEAGGLTSLLM-LLRSYEDETVRRVAAGAIANLAMNE 730

Query:   153 SNKEVIGKSGALKPL-IDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKK 211
              ++++I   G +  L +   D      ++ VA AI NLC   + +AR   DGG+  +L  
Sbjct:   731 VSQQLIVDQGGISLLSLTAADAEDPQTLRMVAGAIANLCGNDKLQARLWSDGGIKALLGM 790

Query:   212 IMDGVHVDELLAILAMLSTNHRAVEEIGDLGGV 244
             +  G H D +LA +A    N    E      GV
Sbjct:   791 VRCG-HPD-VLAQVARGIANFAKCESRATTQGV 821


>MGI|MGI:2442559 [details] [associations]
            symbol:Ankar "ankyrin and armadillo repeat containing"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] [GO:0016020
            "membrane" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] InterPro:IPR000225 InterPro:IPR002110
            InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50088 PROSITE:PS50176
            SMART:SM00185 SMART:SM00248 MGI:MGI:2442559 GO:GO:0016021
            SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
            Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
            PROSITE:PS50297 CTD:150709 eggNOG:NOG116057 HOGENOM:HOG000007170
            HOVERGEN:HBG106658 OMA:HGGIEFD EMBL:AK030065 EMBL:BC132415
            IPI:IPI00223907 RefSeq:NP_795954.2 UniGene:Mm.249056
            ProteinModelPortal:A2RT91 SMR:A2RT91 STRING:A2RT91
            PhosphoSite:A2RT91 PRIDE:A2RT91 Ensembl:ENSMUST00000053499
            GeneID:319695 KEGG:mmu:319695 UCSC:uc007bkt.2
            GeneTree:ENSGT00680000100065 InParanoid:A2RT91 OrthoDB:EOG4S7JP3
            ChiTaRS:ANKAR NextBio:395224 Bgee:A2RT91 CleanEx:MM_ANKAR
            Genevestigator:A2RT91 Uniprot:A2RT91
        Length = 1465

 Score = 123 (48.4 bits), Expect = 0.00041, P = 0.00041
 Identities = 47/206 (22%), Positives = 98/206 (47%)

Query:    95 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 154
             LQ   +  L N+S H +    + E    IP +++ L S   E  S  A  L+ ++  + N
Sbjct:   771 LQYKTVGLLSNISTHVSIVHAIVEAGG-IPAVINLLTSDEPELHSRCAIILYDVAKCE-N 828

Query:   155 KEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDG-GVSVILKKIM 213
             K+VI K   +  LI+LL    +S + +V + I  LC+ +E+  ++++D  G+  +++ + 
Sbjct:   829 KDVIAKYSGIPALINLLSLNKESVLVNVMNCIRVLCMGNESNQQSMKDNNGIQYLIQFLS 888

Query:   214 DGVHVDELL--AILAMLSTNHRAVEE-IGDLGGVSCMLRIIRESTCDRNKENCIAILHTI 270
                 V + L  A +A ++ +++ V++ I   G +  ++ + +        +  +A+  ++
Sbjct:   889 SDSDVLKALSSATIAEVARDNKEVQDAIAKEGAIPPLVTLFKGKQLSVQVKGAMAV-ESL 947

Query:   271 CLSDRTKWKAMREEESTHGTISKLAQ 296
                +    K   E E T   + KL Q
Sbjct:   948 ANCNPLIQKEFLERELTKDLL-KLLQ 972


>TAIR|locus:2039265 [details] [associations]
            symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
            thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
            evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
            "response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0009414 "response to water deprivation"
            evidence=IMP] [GO:0002679 "respiratory burst involved in defense
            response" evidence=IGI;RCA] [GO:0006952 "defense response"
            evidence=IGI] [GO:0051865 "protein autoubiquitination"
            evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
            "protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
            membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
            resistance, salicylic acid mediated signaling pathway"
            evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
            pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
            metabolic process" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] [GO:0031348
            "negative regulation of defense response" evidence=RCA] [GO:0035556
            "intracellular signal transduction" evidence=RCA] [GO:0042742
            "defense response to bacterium" evidence=RCA] [GO:0043069 "negative
            regulation of programmed cell death" evidence=RCA] [GO:0050832
            "defense response to fungus" evidence=RCA] InterPro:IPR003613
            InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
            UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
            GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
            InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
            EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
            eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
            EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
            UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
            STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
            KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
            PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
        Length = 411

 Score = 114 (45.2 bits), Expect = 0.00079, P = 0.00079
 Identities = 52/224 (23%), Positives = 99/224 (44%)

Query:     1 MISQWCR---SQGIE-LPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELR- 55
             +I  WC    S G+E +P     I +  I +  RD         +++  +Q +  K LR 
Sbjct:    75 LIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDS--------ASSHENQVKCLKRLRQ 126

Query:    56 LLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKL 115
             ++++   + R L  E+   +P+ L+ +  +  ENG   +L ++ +  L +L   +   K 
Sbjct:   127 IVSENATNKRCL--EAA-GVPEFLANIVSNDSENG---SLTDEALNLLYHLETSETVLKN 180

Query:   116 VAETPM---VIPLLMDALRSGTIETRSNAAAALFT-LSALDSNKEVIGKSGALKPLIDLL 171
             +        ++  L   ++ G  E+R  A   L   L   D  + +  K      ++ +L
Sbjct:   181 LLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQIL 240

Query:   172 DEG-HQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD 214
             D+   Q A K     + N+C    N+ +AV  G +SVI++ +MD
Sbjct:   241 DDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMD 284


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.131   0.367    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      323       323   0.00086  116 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  54
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  203 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.47u 0.09s 27.56t   Elapsed:  00:00:01
  Total cpu time:  27.48u 0.09s 27.57t   Elapsed:  00:00:01
  Start:  Mon May 20 15:01:52 2013   End:  Mon May 20 15:01:53 2013

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