BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020641
(323 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 128/235 (54%), Gaps = 8/235 (3%)
Query: 78 VSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVR 137
+S +H +LV L+G+C E N +L Y++ G+L L+G P + W R+
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD-----LPTMSMSWEQRLE 143
Query: 138 IAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTR 197
I + AARGL YLH + +IIHRD++S N+LL E+F KI DF +S + ++
Sbjct: 144 ICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 198 VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRL 257
V GT GY PEY + G+LT+KSDVYSFGVVL E+L R + ++PR +L WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 258 SEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
+ +++Q VDP L + C+ +E RP+M V+ L+ L+
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 128/235 (54%), Gaps = 8/235 (3%)
Query: 78 VSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVR 137
+S +H +LV L+G+C E N +L Y++ G+L L+G P + W R+
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD-----LPTMSMSWEQRLE 143
Query: 138 IAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTR 197
I + AARGL YLH + +IIHRD++S N+LL E+F KI DF +S + ++
Sbjct: 144 ICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 198 VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRL 257
V GT GY PEY + G+LT+KSDVYSFGVVL E+L R + ++PR +L WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 258 SEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
+ +++Q VDP L + C+ +E RP+M V+ L+ L+
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 126/236 (53%), Gaps = 8/236 (3%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V ++S H NL+ L G+C+ R+L Y + GS+ L R Q P LDW
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-----PPLDWPK 140
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R RIA+ +ARGL YLH+ P IIHRD++++N+LL E+F+A + DF L+ + D
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDXHV 199
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQS--LVTW 252
V GT G+ APEY TG+ ++K+DV+ +GV+LLEL+TG++ D L+ W
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 259
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQ 308
L E K++ VD L+G Y C Q RP MS VV+ L+
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 125/236 (52%), Gaps = 8/236 (3%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V ++S H NL+ L G+C+ R+L Y + GS+ L R Q P LDW
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-----PPLDWPK 132
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R RIA+ +ARGL YLH+ P IIHRD++++N+LL E+F+A + DF L+ + D
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDXHV 191
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQS--LVTW 252
V G G+ APEY TG+ ++K+DV+ +GV+LLEL+TG++ D L+ W
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQ 308
L E K++ VD L+G Y C Q RP MS VV+ L+
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 106/173 (61%), Gaps = 11/173 (6%)
Query: 73 QLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDW 132
Q + V ++ +HENLVELLG+ +G+ L Y + GSL D L G P L W
Sbjct: 70 QEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT------PPLSW 123
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
R +IA AA G+ +LHE IHRDI+S+N+LL E F AKI+DF L+ + A
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD-HTMPR 244
+ +R++GT Y APE A+ G++T KSD+YSFGVVLLE++TG VD H P+
Sbjct: 181 VXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ 232
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 104/167 (62%), Gaps = 10/167 (5%)
Query: 73 QLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDW 132
Q + V+++ +HENLVELLG+ +G+ L Y + GSL D L G P L W
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLSW 132
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
R +IA AA G+ +LHE IHRDI+S+N+LL E F AKI+DF L+ + A
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ +R++GT Y APE A+ G++T KSD+YSFGVVLLE++TG VD
Sbjct: 190 VMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 103/167 (61%), Gaps = 10/167 (5%)
Query: 73 QLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDW 132
Q + V+++ +HENLVELLG+ +G+ L Y + GSL D L G P L W
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLSW 132
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
R +IA AA G+ +LHE IHRDI+S+N+LL E F AKI+DF L+ + A
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ R++GT Y APE A+ G++T KSD+YSFGVVLLE++TG VD
Sbjct: 190 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 103/167 (61%), Gaps = 10/167 (5%)
Query: 73 QLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDW 132
Q + V+++ +HENLVELLG+ +G+ L Y + GSL D L G P L W
Sbjct: 73 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLSW 126
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
R +IA AA G+ +LHE IHRDI+S+N+LL E F AKI+DF L+ + A
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ R++GT Y APE A+ G++T KSD+YSFGVVLLE++TG VD
Sbjct: 184 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 229
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 26/244 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V+++ RL+H N+V +G + + E+ + GSL+ +LH GA+ LD
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK----SGAREQ--LDERR 138
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R+ +A D A+G+ YLH + P I+HRD++S N+L+ + + K+ DF LS + L
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLX 195
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWAT 254
S GT + APE +KSDVYSFGV+L EL T ++P + P + V +
Sbjct: 196 SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
Query: 255 PRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS- 313
RL ++ + ++P++ C E RP+ + ++ L+PL+KS
Sbjct: 256 KRL---EIPRNLNPQVAA------------IIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
Query: 314 -PPP 316
PPP
Sbjct: 301 VPPP 304
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 26/244 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V+++ RL+H N+V +G + + E+ + GSL+ +LH GA+ LD
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK----SGAREQ--LDERR 138
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R+ +A D A+G+ YLH + P I+HR+++S N+L+ + + K+ DF LS + L
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK--ASTFLS 195
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWAT 254
S GT + APE +KSDVYSFGV+L EL T ++P + P + V +
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
Query: 255 PRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS- 313
RL ++ + ++P++ C E RP+ + ++ L+PL+KS
Sbjct: 256 KRL---EIPRNLNPQVAA------------IIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
Query: 314 -PPP 316
PPP
Sbjct: 301 VPPP 304
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 30/193 (15%)
Query: 61 LKSPKNYPDDE--------KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLH 112
+K+ ++ PD++ +Q + + LKH N++ L G C++ L EFA G L+
Sbjct: 35 VKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLN 94
Query: 113 DILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFED 172
+L G++ P +++W AV ARG+ YLH++ IIHRD++SSN+L+ +
Sbjct: 95 RVLSGKR----IPPDILVNW------AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQK 144
Query: 173 FK--------AKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSF 224
+ KI DF L+ + R G + + APE ++ SDV+S+
Sbjct: 145 VENGDLSNKILKITDFGLARE----WHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSY 200
Query: 225 GVVLLELLTGRKP 237
GV+L ELLTG P
Sbjct: 201 GVLLWELLTGEVP 213
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 78 VSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVR 137
+SR+ H N+V+L G C+ N L E+A GSL+++LHG A+P P +
Sbjct: 55 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG------AEPLPYYTAAHAMS 106
Query: 138 IAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHST 196
+ ++G+ YLH ++IHRD++ N+LL KI DF A D+ + H T
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---TACDI--QTHMT 161
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWAT 254
G+ + APE ++K DV+S+G++L E++T RKP D G + WA
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV 217
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 78 VSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVR 137
+SR+ H N+V+L G C+ N L E+A GSL+++LHG A+P P +
Sbjct: 56 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG------AEPLPYYTAAHAMS 107
Query: 138 IAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHST 196
+ ++G+ YLH ++IHRD++ N+LL KI DF A D+ + H T
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---TACDI--QTHMT 162
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWAT 254
G+ + APE ++K DV+S+G++L E++T RKP D G + WA
Sbjct: 163 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV 218
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V+V+ + +H N++ +GY + NL ++ ++ SL+ LH VQ +
Sbjct: 83 VAVLRKTRHVNILLFMGYMTKDNLAIVT-QWCEGSSLYKHLH----VQETK----FQMFQ 133
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ IA A+G++YLH K +IIHRD++S+N+ L E KI DF L+ +
Sbjct: 134 LIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190
Query: 195 STRVLGTFGYHAPEYAM---TGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVT 251
+ G+ + APE + +SDVYS+G+VL EL+TG P H R Q +
Sbjct: 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250
Query: 252 ---WATPRLSE 259
+A+P LS+
Sbjct: 251 GRGYASPDLSK 261
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY + L ++ ++ SL+ LH + +
Sbjct: 68 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHASE--------TKFE 118
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ IA ARG++YLH K SIIHRD++S+N+ L ED KI DF L+ + +
Sbjct: 119 MKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 192 RLHSTRVLGTFGYHAPEYAM---TGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY L ++ ++ SL+ LH + +
Sbjct: 68 KNEVGVLRKTRHVNILLFMGYSTAPQLAIVT-QWCEGSSLYHHLHASE--------TKFE 118
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ IA ARG++YLH K SIIHRD++S+N+ L ED KI DF L+ + +
Sbjct: 119 MKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 192 RLHSTRVLGTFGYHAPEYAM---TGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY + L ++ ++ SL+ LH + +
Sbjct: 56 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHASE--------TKFE 106
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ IA ARG++YLH K SIIHRD++S+N+ L ED KI DF L+ +
Sbjct: 107 MKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG 163
Query: 192 RLHSTRVLGTFGYHAPEYAM---TGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 164 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 221
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY + L ++ ++ SL+ LH + +
Sbjct: 52 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFE 102
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ + IA A+G++YLH K SIIHRD++S+N+ L ED KI DF L+ + +
Sbjct: 103 MIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 159
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQ---LTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY + L ++ ++ SL+ LH + +
Sbjct: 72 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFE 122
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ + IA A+G++YLH K SIIHRD++S+N+ L ED KI DF L+ + +
Sbjct: 123 MIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 179
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQ---LTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 180 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY + L ++ ++ SL+ LH + +
Sbjct: 80 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFE 130
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ + IA A+G++YLH K SIIHRD++S+N+ L ED KI DF L+ + +
Sbjct: 131 MIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 187
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQ---LTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 25/173 (14%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V ++S L H N+V+L Y + N + EF G L+ L + A P + W
Sbjct: 74 VFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRL-----LDKAHP---IKWSV 123
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFE-----DFKAKIADFNLSNQAPDM 189
++R+ +D A G+EY+ + P I+HRD+RS N+ L AK+ADF+LS Q+
Sbjct: 124 KLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS--- 179
Query: 190 AARLHS-TRVLGTFGYHAPEY--AMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+HS + +LG F + APE A T+K+D YSF ++L +LTG P D
Sbjct: 180 ---VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G G
Sbjct: 43 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGETG 101
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + + +HRD+R++N+L+ E+ K+ADF
Sbjct: 102 KYLRLP-------QLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 151
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 152 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 25/173 (14%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V ++S L H N+V+L Y + N + EF G L+ L + A P + W
Sbjct: 74 VFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRL-----LDKAHP---IKWSV 123
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFE-----DFKAKIADFNLSNQAPDM 189
++R+ +D A G+EY+ + P I+HRD+RS N+ L AK+ADF LS Q+
Sbjct: 124 KLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS--- 179
Query: 190 AARLHS-TRVLGTFGYHAPEY--AMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+HS + +LG F + APE A T+K+D YSF ++L +LTG P D
Sbjct: 180 ---VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G G
Sbjct: 41 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMG 99
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 100 KYLRLP-------QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 149
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 150 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G G
Sbjct: 39 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMG 97
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 98 KYLRLP-------QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 147
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 148 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 94/180 (52%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G
Sbjct: 216 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVG-EYMSKGSLLDFLKG--- 271
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ G L V +A A G+ Y+ + + +HRD+R++N+L+ E+ K+ADF
Sbjct: 272 ----ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 324
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 325 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G G
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVC-EYMSKGSLLDFLKGEMG 108
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 109 KYLRLP-------QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 158
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 159 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 94/180 (52%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G
Sbjct: 216 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKG--- 271
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ G L V +A A G+ Y+ + + +HRD+R++N+L+ E+ K+ADF
Sbjct: 272 ----ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 324
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 325 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G G
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMG 108
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 109 KYLRLP-------QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 158
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 159 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 94/180 (52%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G
Sbjct: 216 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKG--- 271
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ G L V +A A G+ Y+ + + +HRD+R++N+L+ E+ K+ADF
Sbjct: 272 ----ETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 324
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 325 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G G
Sbjct: 40 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIXIVT-EYMSKGSLLDFLKGETG 98
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 99 KYLRLP-------QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D + R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 149 GLARLIEDNEX---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY + L ++ ++ SL+ LH + +
Sbjct: 52 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFE 102
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ + IA A+G++YLH K SIIHRD++S+N+ L ED KI DF L+ +
Sbjct: 103 MIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQ---LTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G
Sbjct: 299 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKG--- 354
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ G L V +A A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 355 ----ETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 407
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 408 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY + L ++ ++ SL+ LH + +
Sbjct: 57 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFE 107
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ + IA A+G++YLH K SIIHRD++S+N+ L ED KI DF L+ +
Sbjct: 108 MIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQ---LTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 165 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY + L ++ ++ SL+ LH + +
Sbjct: 54 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFE 104
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ + IA A+G++YLH K SIIHRD++S+N+ L ED KI DF L+ +
Sbjct: 105 MIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 161
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQ---LTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 162 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 219
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY + L ++ ++ SL+ LH + +
Sbjct: 57 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFE 107
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ + IA A+G++YLH K SIIHRD++S+N+ L ED KI DF L+ +
Sbjct: 108 MIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQ---LTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 165 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G G
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMG 108
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 109 KYLRLP-------QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 158
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 159 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 28/263 (10%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKG 120
+ N D + +++ L+HE++V+ G CVEG+ ++ +E+ G L+ L HG
Sbjct: 54 ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDA 113
Query: 121 VQGAQPGP--VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIA 178
V A+ P L + IA A G+ YL + +HRD+ + N L+ E+ KI
Sbjct: 114 VLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIG 170
Query: 179 DFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
DF +S + + PE M + T +SDV+S GVVL E+ T G++P
Sbjct: 171 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
Query: 238 VDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFR 297
W +LS ++V +C+ + C Q E R
Sbjct: 231 --------------WY--QLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMR 274
Query: 298 PNMSIVVKALQPLLKSPPPAAPV 320
N +K + LL++ A+PV
Sbjct: 275 KN----IKGIHTLLQNLAKASPV 293
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY + L ++ ++ SL+ LH + +
Sbjct: 79 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFE 129
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ + IA A+G++YLH K SIIHRD++S+N+ L ED KI DF L+ +
Sbjct: 130 MIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 186
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQ---LTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 187 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +++HE LV+L E + ++ E+ + GSL D L G G
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMG 108
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 109 KYLRLP-------QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 158
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 159 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY + L ++ ++ SL+ LH + +
Sbjct: 80 KNEVGVLRKTRHVNILLFMGYSTKPQLAIVT-QWCEGSSLYHHLHIIE--------TKFE 130
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ + IA A+G++YLH K SIIHRD++S+N+ L ED KI DF L+ +
Sbjct: 131 MIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 187
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQ---LTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 15/178 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K V V+ + +H N++ +GY L ++ ++ SL+ LH + +
Sbjct: 52 KNEVGVLRKTRHVNILLFMGYSTAPQLAIVT-QWCEGSSLYHHLHIIE--------TKFE 102
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ + IA A+G++YLH K SIIHRD++S+N+ L ED KI DF L+ +
Sbjct: 103 MIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQ---LTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
++ G+ + APE + +SDVY+FG+VL EL+TG+ P + R Q
Sbjct: 160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L ++S + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 122 QGA-----QPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P L V A ARG+EYL K IHRD+ + NVL+ ED K
Sbjct: 134 EFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 190
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ + +T + APE T +SDV+SFGV+L E+ T
Sbjct: 191 IADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G
Sbjct: 217 LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKG--- 272
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ G L V +A A G+ Y+ + + +HRD+R++N+L+ E+ K+ADF
Sbjct: 273 ----EMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 325
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 326 GLGRLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ GSL D L G
Sbjct: 47 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKG--- 102
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ G L V ++ A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 103 ----ETGKYLRLPQLVDMSAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 155
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 156 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 25/173 (14%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V ++S L H N+V+L Y + N + EF G L+ L + A P + W
Sbjct: 74 VFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRL-----LDKAHP---IKWSV 123
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFE-----DFKAKIADFNLSNQAPDM 189
++R+ +D A G+EY+ + P I+HRD+RS N+ L AK+ADF S Q+
Sbjct: 124 KLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS--- 179
Query: 190 AARLHS-TRVLGTFGYHAPEY--AMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+HS + +LG F + APE A T+K+D YSF ++L +LTG P D
Sbjct: 180 ---VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G G
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMG 108
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 109 KYLRLP-------QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 158
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D + R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 159 GLARLIEDNEX---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L ++S + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 59 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 118
Query: 122 Q-----GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ P L V A ARG+EYL K IHRD+ + NVL+ ED K
Sbjct: 119 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 175
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ + +T + APE T +SDV+SFGV+L E+ T
Sbjct: 176 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + G L D L G G
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGCLLDFLKGEMG 108
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 109 KYLRLP-------QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 158
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 159 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L ++S + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 63 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 122
Query: 122 QGA-----QPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P L V A ARG+EYL K IHRD+ + NVL+ ED K
Sbjct: 123 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 179
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ + +T + APE T +SDV+SFGV+L E+ T
Sbjct: 180 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + G L D L G G
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVM-EYMSKGCLLDFLKGEMG 108
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 109 KYLRLP-------QLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 158
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 159 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L ++S + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 66 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 125
Query: 122 QGA-----QPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P L V A ARG+EYL K IHRD+ + NVL+ ED K
Sbjct: 126 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 182
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ + +T + APE T +SDV+SFGV+L E+ T
Sbjct: 183 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L ++S + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 67 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 126
Query: 122 QGA-----QPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P L V A ARG+EYL K IHRD+ + NVL+ ED K
Sbjct: 127 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 183
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ + +T + APE T +SDV+SFGV+L E+ T
Sbjct: 184 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L ++S + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 122 Q-----GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ P L V A ARG+EYL K IHRD+ + NVL+ ED K
Sbjct: 134 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 190
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ + +T + APE T +SDV+SFGV+L E+ T
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L ++S + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 122 QGA-----QPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P L V A ARG+EYL K IHRD+ + NVL+ ED K
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 190
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ + +T + APE T +SDV+SFGV+L E+ T
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ GSL D L G G
Sbjct: 47 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKGETG 105
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V ++ A G+ Y+ + +HRD+R++N+L+ E+ K+ADF
Sbjct: 106 KYLRLP-------QLVDMSAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADF 155
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D + R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 156 GLARLIEDNE---WTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L ++S + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 115 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 174
Query: 122 QGA-----QPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P L V A ARG+EYL K IHRD+ + NVL+ ED K
Sbjct: 175 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 231
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ + +T + APE T +SDV+SFGV+L E+ T
Sbjct: 232 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ Q V+ +L+HE LV+L E + ++ E+ + GSL D L G G
Sbjct: 50 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGEMG 108
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + +HRD+ ++N+L+ E+ K+ADF
Sbjct: 109 KYLRLP-------QLVDMAAQIASGMAYVERM---NYVHRDLAAANILVGENLVCKVADF 158
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE A+ G+ T KSDV+SFG++L EL T GR P
Sbjct: 159 GLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L ++S + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGL 133
Query: 122 QGA-----QPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P L V A ARG+EYL K IHRD+ + NVL+ ED K
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMK 190
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ + +T + APE T +SDV+SFGV+L E+ T
Sbjct: 191 IADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 25/168 (14%)
Query: 76 SVVSRLKHENLVELLGYCVE--GNLRVLAYEFATMGSLHDILHGR-KGVQGAQPGPVLDW 132
SV+++L+H NLV+LLG VE G L ++ E+ GSL D L R + V G G L
Sbjct: 238 SVMTQLRHSNLVQLLGVIVEEKGGLYIVT-EYMAKGSLVDYLRSRGRSVLG---GDCL-- 291
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
++ ++D +EYL + +HRD+ + NVL+ ED AK++DF L+ +A
Sbjct: 292 ---LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS----- 340
Query: 193 LHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
ST+ G + APE + + KSDV+SFG++L E+ + GR P
Sbjct: 341 --STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 91/168 (54%), Gaps = 25/168 (14%)
Query: 76 SVVSRLKHENLVELLGYCVE--GNLRVLAYEFATMGSLHDILHGR-KGVQGAQPGPVLDW 132
SV+++L+H NLV+LLG VE G L ++ E+ GSL D L R + V G
Sbjct: 51 SVMTQLRHSNLVQLLGVIVEEKGGLYIVT-EYMAKGSLVDYLRSRGRSVLGGD------- 102
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
++ ++D +EYL + +HRD+ + NVL+ ED AK++DF L+ +A
Sbjct: 103 -CLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS----- 153
Query: 193 LHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
ST+ G + APE + + KSDV+SFG++L E+ + GR P
Sbjct: 154 --STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 91/168 (54%), Gaps = 25/168 (14%)
Query: 76 SVVSRLKHENLVELLGYCVE--GNLRVLAYEFATMGSLHDILHGR-KGVQGAQPGPVLDW 132
SV+++L+H NLV+LLG VE G L ++ E+ GSL D L R + V G
Sbjct: 66 SVMTQLRHSNLVQLLGVIVEEKGGLYIVT-EYMAKGSLVDYLRSRGRSVLGGD------- 117
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
++ ++D +EYL + +HRD+ + NVL+ ED AK++DF L+ +A
Sbjct: 118 -CLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS----- 168
Query: 193 LHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
ST+ G + APE + + KSDV+SFG++L E+ + GR P
Sbjct: 169 --STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 90/168 (53%), Gaps = 25/168 (14%)
Query: 76 SVVSRLKHENLVELLGYCVE--GNLRVLAYEFATMGSLHDILHGR-KGVQGAQPGPVLDW 132
SV+++L+H NLV+LLG VE G L ++ E+ GSL D L R + V G
Sbjct: 57 SVMTQLRHSNLVQLLGVIVEEKGGLYIVT-EYMAKGSLVDYLRSRGRSVLGGD------- 108
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
++ ++D +EYL + +HRD+ + NVL+ ED AK++DF L+ +A
Sbjct: 109 -CLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS----- 159
Query: 193 LHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
ST+ G + APE + KSDV+SFG++L E+ + GR P
Sbjct: 160 --STQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 141 EXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK P+ + ++ +LKH+ LV+L E + ++ E+ GSL D L +G
Sbjct: 41 LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKDGEG 99
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
P V +A A G+ Y+ + + IHRD+RS+N+L+ KIADF
Sbjct: 100 RALKLP-------NLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADF 149
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D + R F + APE A+ G+ T KSDV+SFG++L EL+T GR P
Sbjct: 150 GLARLIEDNEX---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 198 IADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ ++T + APE T +SDV+SFGV++ E+ T
Sbjct: 198 IADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 68 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 127
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 128 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMK 184
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 185 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 127 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 186
Query: 122 Q-----GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 187 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 243
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 244 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 70 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 129
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 130 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 186
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 187 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 73 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 132
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 133 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 189
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 190 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 17/165 (10%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ L+H+ LV+L + + ++ EF GSL D L +G + QP P L
Sbjct: 62 NVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL----- 113
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+ + A G+ ++ ++ + IHRD+R++N+L+ KIADF L+ D ++
Sbjct: 114 IDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED---NEYT 167
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
R F + APE G T KSDV+SFG++L+E++T GR P
Sbjct: 168 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K DD + V+ +L H LV+L G C+E L +EF G L D L ++G
Sbjct: 59 IKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG 118
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ A+ T + + +D G+ YL E +IHRD+ + N L+ E+ K++DF
Sbjct: 119 LFAAE--------TLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 167
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
++ D ST + +PE + + KSDV+SFGV++ E+ + G+ P +
Sbjct: 168 GMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 226
Query: 240 H 240
+
Sbjct: 227 N 227
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ +
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMR 197
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 17/165 (10%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ L+H+ LV+L + + ++ EF GSL D L +G + QP P L
Sbjct: 235 NVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL----- 286
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+ + A G+ ++ ++ + IHRD+R++N+L+ KIADF L+ D ++
Sbjct: 287 IDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YT 340
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
R F + APE G T KSDV+SFG++L+E++T GR P
Sbjct: 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D + V+ +L H LV+L G C+E L +EF G L D L ++G+ A+
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--- 103
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD 188
T + + +D G+ YL E S+IHRD+ + N L+ E+ K++DF ++ D
Sbjct: 104 -----TLLGMCLDVCEGMAYLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 155
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDH 240
ST + +PE + + KSDV+SFGV++ E+ + G+ P ++
Sbjct: 156 -DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
E+ L +VS + KH+N++ LLG C + + E+A+ G+L + L R+ G+
Sbjct: 81 EEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 62 KSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVE--GNLRVLAYEFATMGSLHDILHGRK 119
+S N+ D K+ + ++ L HEN+V+ G C E GN L EF GSL + L K
Sbjct: 61 ESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK 120
Query: 120 GVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIAD 179
++ +++ AV +G++YL + +HRD+ + NVL+ + + KI D
Sbjct: 121 NK--------INLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 169
Query: 180 FNLSN--QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
F L+ + + R F Y APE M + SDV+SFGV L ELLT
Sbjct: 170 FGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + +A+ G+L + L R+ G+
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGM 140
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 13/173 (7%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D + V+ +L H LV+L G C+E L +EF G L D L ++G+ A+
Sbjct: 50 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--- 106
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD 188
T + + +D G+ YL E +IHRD+ + N L+ E+ K++DF ++ D
Sbjct: 107 -----TLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDH 240
ST + +PE + + KSDV+SFGV++ E+ + G+ P ++
Sbjct: 159 -DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 13/173 (7%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D + V+ +L H LV+L G C+E L +EF G L D L ++G+ A+
Sbjct: 45 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--- 101
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD 188
T + + +D G+ YL E +IHRD+ + N L+ E+ K++DF ++ D
Sbjct: 102 -----TLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 153
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDH 240
ST + +PE + + KSDV+SFGV++ E+ + G+ P ++
Sbjct: 154 -DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 205
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 28/254 (11%)
Query: 70 DEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HG-----RKGVQ 122
D ++ +++ L+H+++V G C EG ++ +E+ G L+ L HG G +
Sbjct: 89 DFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 148
Query: 123 GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNL 182
PGP L + +A A G+ YL +HRD+ + N L+ + KI DF +
Sbjct: 149 DVAPGP-LGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 204
Query: 183 SNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHT 241
S R + + PE + + T +SDV+SFGVVL E+ T G++P
Sbjct: 205 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---- 260
Query: 242 MPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMS 301
W +LS + C+ + E C Q E + R ++
Sbjct: 261 ----------WY--QLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIK 308
Query: 302 IVVKALQPLLKSPP 315
V LQ L ++PP
Sbjct: 309 DVHARLQALAQAPP 322
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 62 KSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVE--GNLRVLAYEFATMGSLHDILHGRK 119
+S N+ D K+ + ++ L HEN+V+ G C E GN L EF GSL + L K
Sbjct: 49 ESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK 108
Query: 120 GVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIAD 179
++ +++ AV +G++YL + +HRD+ + NVL+ + + KI D
Sbjct: 109 NK--------INLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 157
Query: 180 FNLSN--QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
F L+ + + R F Y APE M + SDV+SFGV L ELLT
Sbjct: 158 FGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 27/165 (16%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ L+H+ LV+L + + ++ EF GSL D L +G + QP P L
Sbjct: 229 NVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSK--QPLPKL----- 280
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+ + A G+ ++ ++ + IHRD+R++N+L+ KIADF L+
Sbjct: 281 IDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA------------ 325
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
RV F + APE G T KSDV+SFG++L+E++T GR P
Sbjct: 326 -RVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 13/173 (7%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D + V+ +L H LV+L G C+E L +EF G L D L ++G+ A+
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--- 103
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD 188
T + + +D G+ YL E +IHRD+ + N L+ E+ K++DF ++ D
Sbjct: 104 -----TLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 155
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDH 240
ST + +PE + + KSDV+SFGV++ E+ + G+ P ++
Sbjct: 156 -DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 28/254 (11%)
Query: 70 DEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HG-----RKGVQ 122
D ++ +++ L+H+++V G C EG ++ +E+ G L+ L HG G +
Sbjct: 60 DFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 119
Query: 123 GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNL 182
PGP L + +A A G+ YL +HRD+ + N L+ + KI DF +
Sbjct: 120 DVAPGP-LGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 175
Query: 183 SNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHT 241
S R + + PE + + T +SDV+SFGVVL E+ T G++P
Sbjct: 176 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---- 231
Query: 242 MPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMS 301
W +LS + C+ + E C Q E + R ++
Sbjct: 232 ----------WY--QLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIK 279
Query: 302 IVVKALQPLLKSPP 315
V LQ L ++PP
Sbjct: 280 DVHARLQALAQAPP 293
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 28/254 (11%)
Query: 70 DEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HG-----RKGVQ 122
D ++ +++ L+H+++V G C EG ++ +E+ G L+ L HG G +
Sbjct: 66 DFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 125
Query: 123 GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNL 182
PGP L + +A A G+ YL +HRD+ + N L+ + KI DF +
Sbjct: 126 DVAPGP-LGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGM 181
Query: 183 SNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHT 241
S R + + PE + + T +SDV+SFGVVL E+ T G++P
Sbjct: 182 SRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP---- 237
Query: 242 MPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMS 301
W +LS + C+ + E C Q E + R ++
Sbjct: 238 ----------WY--QLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIK 285
Query: 302 IVVKALQPLLKSPP 315
V LQ L ++PP
Sbjct: 286 DVHARLQALAQAPP 299
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 71 EKQLVSVVSRL-------KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--GV 121
EK L +VS + KH+N++ LLG C + + +A+ G+L + L R+ G+
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGM 140
Query: 122 QGAQ-----PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
+ + P + + V ARG+EYL + IHRD+ + NVL+ E+ K
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
Query: 177 IADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ ++ +T + APE T +SDV+SFGV++ E+ T
Sbjct: 198 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
Query: 53 YPSHENERLKSPKN---YPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMG 109
Y H +KS K PD +++ +L+H+ LV L + + ++ E+ G
Sbjct: 39 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENG 97
Query: 110 SLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL 169
SL D L G++ +LD +A A G+ ++ E+ + IHRD+R++N+L+
Sbjct: 98 SLVDFLKTPSGIK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILV 147
Query: 170 FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVV 227
+ KIADF L+ D ++ R F + APE G T KSDV+SFG++
Sbjct: 148 SDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 204
Query: 228 LLELLT-GRKP 237
L E++T GR P
Sbjct: 205 LTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
Query: 53 YPSHENERLKSPKN---YPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMG 109
Y H +KS K PD +++ +L+H+ LV L + + ++ E+ G
Sbjct: 40 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENG 98
Query: 110 SLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL 169
SL D L G++ +LD +A A G+ ++ E+ + IHRD+R++N+L+
Sbjct: 99 SLVDFLKTPSGIK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILV 148
Query: 170 FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVV 227
+ KIADF L+ D ++ R F + APE G T KSDV+SFG++
Sbjct: 149 SDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 228 LLELLT-GRKP 237
L E++T GR P
Sbjct: 206 LTEIVTHGRIP 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
Query: 53 YPSHENERLKSPKN---YPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMG 109
Y H +KS K PD +++ +L+H+ LV L + + ++ E+ G
Sbjct: 34 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENG 92
Query: 110 SLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL 169
SL D L G++ +LD +A A G+ ++ E+ + IHRD+R++N+L+
Sbjct: 93 SLVDFLKTPSGIK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILV 142
Query: 170 FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVV 227
+ KIADF L+ D ++ R F + APE G T KSDV+SFG++
Sbjct: 143 SDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 228 LLELLT-GRKP 237
L E++T GR P
Sbjct: 200 LTEIVTHGRIP 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK PD +++ +L+H+ LV L + + ++ E+ GSL D L G
Sbjct: 55 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSG 113
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
++ +LD +A A G+ ++ E+ + IHRD+R++N+L+ + KIADF
Sbjct: 114 IK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 163
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D ++ R F + APE G T KSDV+SFG++L E++T GR P
Sbjct: 164 GLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 27/254 (10%)
Query: 70 DEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGV-----Q 122
D ++ +++ L+HE++V+ G C +G+ ++ +E+ G L+ L HG + Q
Sbjct: 63 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 122
Query: 123 GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNL 182
Q L + IA A G+ YL + +HRD+ + N L+ + KI DF +
Sbjct: 123 PRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGM 179
Query: 183 SNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHT 241
S + + PE M + T +SDV+SFGV+L E+ T G++P
Sbjct: 180 SRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP---- 235
Query: 242 MPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMS 301
W +LS +V +C+ E C Q E + R N+
Sbjct: 236 ----------WF--QLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIK 283
Query: 302 IVVKALQPLLKSPP 315
+ K L L K+ P
Sbjct: 284 EIYKILHALGKATP 297
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+L H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPS-SLAMLDLL 158
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 272
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 273 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 319
Query: 313 SP 314
P
Sbjct: 320 DP 321
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+L H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPSS-LAMLDLL 144
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 258
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 259 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 305
Query: 313 SP 314
P
Sbjct: 306 DP 307
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
Query: 53 YPSHENERLKSPKN---YPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMG 109
Y H +KS K PD +++ +L+H+ LV L + + ++ E+ G
Sbjct: 29 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENG 87
Query: 110 SLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL 169
SL D L G++ +LD +A A G+ ++ E+ + IHRD+R++N+L+
Sbjct: 88 SLVDFLKTPSGIK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILV 137
Query: 170 FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVV 227
+ KIADF L+ D ++ R F + APE G T KSDV+SFG++
Sbjct: 138 SDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 194
Query: 228 LLELLT-GRKP 237
L E++T GR P
Sbjct: 195 LTEIVTHGRIP 205
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 20/191 (10%)
Query: 53 YPSHENERLKSPKN---YPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMG 109
Y H +KS K PD +++ +L+H+ LV L + + ++ E+ G
Sbjct: 34 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENG 92
Query: 110 SLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL 169
SL D L G++ +LD +A A G+ ++ E+ + IHRD+R++N+L+
Sbjct: 93 SLVDFLKTPSGIK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILV 142
Query: 170 FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVV 227
+ KIADF L+ D + R F + APE G T KSDV+SFG++
Sbjct: 143 SDTLSCKIADFGLARLIEDAEX---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 228 LLELLT-GRKP 237
L E++T GR P
Sbjct: 200 LTEIVTHGRIP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK PD +++ +L+H+ LV L + + ++ E+ GSL D L G
Sbjct: 51 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSG 109
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
++ +LD +A A G+ ++ E+ + IHRD+R++N+L+ + KIADF
Sbjct: 110 IK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 159
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D + R F + APE G T KSDV+SFG++L E++T GR P
Sbjct: 160 GLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 20/191 (10%)
Query: 53 YPSHENERLKSPKN---YPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMG 109
Y H +KS K PD +++ +L+H+ LV L + + ++ E+ G
Sbjct: 35 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENG 93
Query: 110 SLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL 169
SL D L G++ +LD +A A G+ ++ E+ + IHRD+R++N+L+
Sbjct: 94 SLVDFLKTPSGIK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILV 143
Query: 170 FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVV 227
+ KIADF L+ D + R F + APE G T KSDV+SFG++
Sbjct: 144 SDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 200
Query: 228 LLELLT-GRKP 237
L E++T GR P
Sbjct: 201 LTEIVTHGRIP 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
LK PD +++ +L+H+ LV L + + ++ E+ GSL D L G
Sbjct: 53 LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSG 111
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
++ +LD +A A G+ ++ E+ + IHRD+R++N+L+ + KIADF
Sbjct: 112 IK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 161
Query: 181 NLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
L+ D + R F + APE G T KSDV+SFG++L E++T GR P
Sbjct: 162 GLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 20/191 (10%)
Query: 53 YPSHENERLKSPKN---YPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMG 109
Y H +KS K PD +++ +L+H+ LV L + + ++ E+ G
Sbjct: 36 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENG 94
Query: 110 SLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL 169
SL D L G++ +LD +A A G+ ++ E+ + IHRD+R++N+L+
Sbjct: 95 SLVDFLKTPSGIK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILV 144
Query: 170 FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVV 227
+ KIADF L+ D + R F + APE G T KSDV+SFG++
Sbjct: 145 SDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 201
Query: 228 LLELLT-GRKP 237
L E++T GR P
Sbjct: 202 LTEIVTHGRIP 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 20/191 (10%)
Query: 53 YPSHENERLKSPKN---YPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMG 109
Y H +KS K PD +++ +L+H+ LV L + + ++ E+ G
Sbjct: 34 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENG 92
Query: 110 SLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL 169
SL D L G++ +LD +A A G+ ++ E+ + IHRD+R++N+L+
Sbjct: 93 SLVDFLKTPSGIK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILV 142
Query: 170 FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVV 227
+ KIADF L+ D + R F + APE G T KSDV+SFG++
Sbjct: 143 SDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 228 LLELLT-GRKP 237
L E++T GR P
Sbjct: 200 LTEIVTHGRIP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 20/191 (10%)
Query: 53 YPSHENERLKSPKN---YPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMG 109
Y H +KS K PD +++ +L+H+ LV L + + ++ E+ G
Sbjct: 43 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENG 101
Query: 110 SLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL 169
SL D L G++ +LD +A A G+ ++ E+ + IHRD+R++N+L+
Sbjct: 102 SLVDFLKTPSGIK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILV 151
Query: 170 FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVV 227
+ KIADF L+ D + R F + APE G T KSDV+SFG++
Sbjct: 152 SDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 208
Query: 228 LLELLT-GRKP 237
L E++T GR P
Sbjct: 209 LTEIVTHGRIP 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 20/191 (10%)
Query: 53 YPSHENERLKSPKN---YPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMG 109
Y H +KS K PD +++ +L+H+ LV L + + ++ E+ G
Sbjct: 34 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENG 92
Query: 110 SLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL 169
SL D L G++ +LD +A A G+ ++ E+ + IHRD+R++N+L+
Sbjct: 93 SLVDFLKTPSGIK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRDLRAANILV 142
Query: 170 FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVV 227
+ KIADF L+ D + R F + APE G T KSDV+SFG++
Sbjct: 143 SDTLSCKIADFGLARLIEDNEX---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 228 LLELLT-GRKP 237
L E++T GR P
Sbjct: 200 LTEIVTHGRIP 210
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 23/188 (12%)
Query: 61 LKSPKNYP--DDEKQL---VSVVSRLKHE-NLVELLGYCVEGNLRVLAYEFATMGSLHDI 114
+K K Y DD + + V+ +L H N++ LLG C LA E+A G+L D
Sbjct: 57 IKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 116
Query: 115 LHGRKGVQ-------GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNV 167
L + ++ L + A D ARG++YL +K IHRD+ + N+
Sbjct: 117 LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNI 173
Query: 168 LLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFG 225
L+ E++ AKIADF LS ++ + +G + A E T SDV+S+G
Sbjct: 174 LVGENYVAKIADFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 228
Query: 226 VVLLELLT 233
V+L E+++
Sbjct: 229 VLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 23/188 (12%)
Query: 61 LKSPKNYP--DDEKQL---VSVVSRLKHE-NLVELLGYCVEGNLRVLAYEFATMGSLHDI 114
+K K Y DD + + V+ +L H N++ LLG C LA E+A G+L D
Sbjct: 47 IKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 106
Query: 115 LHGRKGVQ-------GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNV 167
L + ++ L + A D ARG++YL +K IHRD+ + N+
Sbjct: 107 LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNI 163
Query: 168 LLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFG 225
L+ E++ AKIADF LS ++ + +G + A E T SDV+S+G
Sbjct: 164 LVGENYVAKIADFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 218
Query: 226 VVLLELLT 233
V+L E+++
Sbjct: 219 VLLWEIVS 226
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 143
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 144 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 257
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 258 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 304
Query: 313 SP 314
P
Sbjct: 305 DP 306
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPS-SLAMLDLL 135
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 136 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 192
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 249
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 250 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 296
Query: 313 SP 314
P
Sbjct: 297 DP 298
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPSS-LAMLDLL 144
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYR 201
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 258
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 259 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 305
Query: 313 SP 314
P
Sbjct: 306 DP 307
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPSS-LAMLDLL 144
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 145 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 258
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 259 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 305
Query: 313 SP 314
P
Sbjct: 306 DP 307
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPS-SLAMLDLL 158
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 272
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 273 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 319
Query: 313 SP 314
P
Sbjct: 320 DP 321
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPS-SLAMLDLL 143
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 144 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 257
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 258 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 304
Query: 313 SP 314
P
Sbjct: 305 DP 306
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETR-PRPSQPS-SLAMLDLL 158
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 159 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 272
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 273 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 319
Query: 313 SP 314
P
Sbjct: 320 DP 321
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPSS-LAMLDLL 150
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 151 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 207
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 208 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 264
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 265 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 311
Query: 313 SP 314
P
Sbjct: 312 DP 313
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 13/173 (7%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D + V+ +L H LV+L G C+E L EF G L D L ++G+ A+
Sbjct: 48 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAE--- 104
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD 188
T + + +D G+ YL E +IHRD+ + N L+ E+ K++DF ++ D
Sbjct: 105 -----TLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDH 240
ST + +PE + + KSDV+SFGV++ E+ + G+ P ++
Sbjct: 157 -DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPSS-LAMLDLL 160
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 161 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 217
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 218 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 274
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 275 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 321
Query: 313 SP 314
P
Sbjct: 322 DP 323
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 103/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP-RPSQPSS-LAMLDLL 170
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++ +
Sbjct: 171 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 227
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 228 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 284
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 285 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 331
Query: 313 SP 314
P
Sbjct: 332 DP 333
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDWM 133
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +M
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV----VLLYM 121
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M
Sbjct: 122 -----ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDT 170
Query: 194 HSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
++ F + APE + + KSDV++FGV+L E+ T G P
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
+Q ++V+S+ + + G ++ + E+ GS D+L +PGP LD
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LD 117
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
I + +GL+YLH + + IHRDI+++NVLL E + K+ADF ++ Q D
Sbjct: 118 ETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--T 172
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVT 251
++ +GT + APE K+D++S G+ +EL G P P L+
Sbjct: 173 QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP 232
Query: 252 WATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVK 305
P P L+G Y C+ E FRP ++K
Sbjct: 233 KNNP------------PTLEGNY----SKPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPS-SLAMLDLL 161
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++
Sbjct: 162 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 218
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 219 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 275
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 276 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 322
Query: 313 SP 314
P
Sbjct: 323 DP 324
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ +KH NLV+LLG C + EF T G+L D L R+ + VL +M
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYM-- 121
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M ++
Sbjct: 122 ---ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYT 172
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
F + APE + + KSDV++FGV+L E+ T
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ +KH NLV+LLG C + EF T G+L D L R+ + VL +M
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYM-- 116
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M ++
Sbjct: 117 ---ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYT 167
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
F + APE + + KSDV++FGV+L E+ T G P
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 84/183 (45%), Gaps = 31/183 (16%)
Query: 81 LKHENLVELLGYCVEG-NLRV---LAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
+KHENL++ + G NL V L F GSL D L G ++ W
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN----------IITWNELC 115
Query: 137 RIAVDAARGLEYLHEKV--------QPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD 188
+A +RGL YLHE V +PSI HRD +S NVLL D A +ADF L+ +
Sbjct: 116 HVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEP 175
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-----DVYSFGVVLLELLTGRK----PVD 239
+ +GT Y APE Q+ D+Y+ G+VL EL++ K PVD
Sbjct: 176 GKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD 235
Query: 240 HTM 242
M
Sbjct: 236 EYM 238
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDWM 133
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +M
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYM 121
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M
Sbjct: 122 -----ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDT 170
Query: 194 HSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
++ F + APE + + KSDV++FGV+L E+ T G P
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ +KH NLV+LLG C + EF T G+L D L R+ + VL +M
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYM-- 116
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M ++
Sbjct: 117 ---ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYT 167
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
F + APE + + KSDV++FGV+L E+ T
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 25/242 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++S+ H+N+V +G ++ R + E G L L + + +QP L + +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPS-SLAMLDLL 184
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARL 193
+A D A G +YL E IHRDI + N LL AKI DF ++
Sbjct: 185 HVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 241
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTW 252
+ + PE M G T K+D +SFGV+L E+ + G P + Q ++ +
Sbjct: 242 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEF 298
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
T D K C P + C Q++ E RPN +I+++ ++ +
Sbjct: 299 VTSGGRMDPPKNCPGPVYR-------------IMTQCWQHQPEDRPNFAIILERIEYCTQ 345
Query: 313 SP 314
P
Sbjct: 346 DP 347
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ +KH NLV+LLG C + EF T G+L D L R+ + VL +M
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYM-- 114
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS H+
Sbjct: 115 ---ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
+ APE + + KSDV++FGV+L E+ T G P
Sbjct: 169 GAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ +KH NLV+LLG C + EF T G+L D L R+ + VL +M
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYM-- 116
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M ++
Sbjct: 117 ---ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYT 167
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
F + APE + + KSDV++FGV+L E+ T G P
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ +KH NLV+LLG C + EF T G+L D L R+ + VL +M
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYM-- 116
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M ++
Sbjct: 117 ---ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYT 167
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
F + APE + + KSDV++FGV+L E+ T
Sbjct: 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDWM 133
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +M
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV----VLLYM 117
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS
Sbjct: 118 -----ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 169
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
H+ + APE + + KSDV++FGV+L E+ T
Sbjct: 170 HAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDWM 133
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +M
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYM 120
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M
Sbjct: 121 -----ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDT 169
Query: 194 HSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
++ F + APE + + KSDV++FGV+L E+ T
Sbjct: 170 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
Query: 53 YPSHENERLKSPKN---YPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMG 109
Y H +KS K PD +++ +L+H+ LV L + + ++ E+ G
Sbjct: 30 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENG 88
Query: 110 SLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL 169
SL D L G++ +LD +A A G+ ++ E+ + IHR++R++N+L+
Sbjct: 89 SLVDFLKTPSGIK-LTINKLLD------MAAQIAEGMAFIEER---NYIHRNLRAANILV 138
Query: 170 FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVV 227
+ KIADF L+ D ++ R F + APE G T KSDV+SFG++
Sbjct: 139 SDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 195
Query: 228 LLELLT-GRKP 237
L E++T GR P
Sbjct: 196 LTEIVTHGRIP 206
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDWM 133
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +M
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYM 121
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M
Sbjct: 122 -----ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDT 170
Query: 194 HSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
++ F + APE + + KSDV++FGV+L E+ T
Sbjct: 171 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDWM 133
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +M
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYM 116
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M
Sbjct: 117 -----ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDT 165
Query: 194 HSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
++ F + APE + + KSDV++FGV+L E+ T G P
Sbjct: 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDWM 133
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +M
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYM 121
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS
Sbjct: 122 -----ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 173
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
H+ + APE + + KSDV++FGV+L E+ T
Sbjct: 174 HAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDWM 133
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +M
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYM 116
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M
Sbjct: 117 -----ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDT 165
Query: 194 HSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
++ F + APE + + KSDV++FGV+L E+ T G P
Sbjct: 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ +KH NLV+LLG C + EF T G+L D L R+ + VL +M
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYM-- 114
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS H+
Sbjct: 115 ---ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ APE + + KSDV++FGV+L E+ T
Sbjct: 169 GAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDWM 133
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +M
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYM 129
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M
Sbjct: 130 -----ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDT 178
Query: 194 HSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
++ F + APE + + KSDV++FGV+L E+ T G P
Sbjct: 179 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 225
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ +KH NLV+LLG C + EF T G+L D L R+ + VL +M
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYM-- 118
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M ++
Sbjct: 119 ---ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYT 169
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
F + APE + + KSDV++FGV+L E+ T
Sbjct: 170 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
+Q ++V+S+ + + G ++ + E+ GS D+L +PGP LD
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LD 102
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
I + +GL+YLH + + IHRDI+++NVLL E + K+ADF ++ Q D
Sbjct: 103 ETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--T 157
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVT 251
++ +GT + APE K+D++S G+ +EL G P P L+
Sbjct: 158 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP 217
Query: 252 WATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVK 305
P P L+G Y C+ E FRP ++K
Sbjct: 218 KNNP------------PTLEGNY----SKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
+Q ++V+S+ + + G ++ + E+ GS D+L +PGP LD
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LD 102
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
I + +GL+YLH + + IHRDI+++NVLL E + K+ADF ++ Q D
Sbjct: 103 ETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--T 157
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVT 251
++ +GT + APE K+D++S G+ +EL G P P L+
Sbjct: 158 QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP 217
Query: 252 WATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVK 305
P P L+G Y C+ E FRP ++K
Sbjct: 218 KNNP------------PTLEGNY----SKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ +KH NLV+LLG C + EF T G+L D L R+ + VL +M
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYM-- 118
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M ++
Sbjct: 119 ---ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDTYT 169
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
F + APE + + KSDV++FGV+L E+ T
Sbjct: 170 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 86/185 (46%), Gaps = 36/185 (19%)
Query: 81 LKHENLVELLG-----YCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+KHEN+++ +G V+ +L ++ F GSL D L V+ W
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLIT-AFHEKGSLSDFLKAN----------VVSWNEL 123
Query: 136 VRIAVDAARGLEYLHEKV-------QPSIIHRDIRSSNVLLFEDFKAKIADFNLS--NQA 186
IA ARGL YLHE + +P+I HRDI+S NVLL + A IADF L+ +A
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA 183
Query: 187 PDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-----DVYSFGVVLLELLT----GRKP 237
A H +GT Y APE Q+ D+Y+ G+VL EL + P
Sbjct: 184 GKSAGDTHGQ--VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
Query: 238 VDHTM 242
VD M
Sbjct: 242 VDEYM 246
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 13/161 (8%)
Query: 78 VSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVR 137
+ L H ++V LLG C +L+ L ++ +GSL D + +G G P +L+W
Sbjct: 87 IGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALG--PQLLLNW----- 138
Query: 138 IAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTR 197
V A+G+ YL E ++HR++ + NVLL + ++ADF +++ P +L +
Sbjct: 139 -GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 194
Query: 198 VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
+ A E G+ T +SDV+S+GV + EL+T G +P
Sbjct: 195 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+++ L+H+ LV L + E+ GSL D L +G + P ++D+ +
Sbjct: 60 NLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP-KLIDFSAQ 118
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+ A G+ Y+ K + IHRD+R++NVL+ E KIADF L+ D ++
Sbjct: 119 I------AEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIED---NEYT 166
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
R F + APE G T KSDV+SFG++L E++T G+ P
Sbjct: 167 AREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ +KH NLV+LLG C + EF T G+L D L R+ + VL +M
Sbjct: 59 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYM-- 114
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS H+
Sbjct: 115 ---ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHA 168
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ APE + + KSDV++FGV+L E+ T
Sbjct: 169 GAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 23/188 (12%)
Query: 61 LKSPKNYP--DDEKQL---VSVVSRLKHE-NLVELLGYCVEGNLRVLAYEFATMGSLHDI 114
+K K Y DD + + V+ +L H N++ LLG C LA E+A G+L D
Sbjct: 54 IKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 113
Query: 115 LHGRKGVQ-------GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNV 167
L + ++ L + A D ARG++YL +K IHR++ + N+
Sbjct: 114 LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNI 170
Query: 168 LLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFG 225
L+ E++ AKIADF LS ++ + +G + A E T SDV+S+G
Sbjct: 171 LVGENYVAKIADFGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 225
Query: 226 VVLLELLT 233
V+L E+++
Sbjct: 226 VLLWEIVS 233
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
+Q ++V+S+ + + G ++ + E+ GS D+L +PGP LD
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---------EPGP-LD 122
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
I + +GL+YLH + + IHRDI+++NVLL E + K+ADF ++ Q D
Sbjct: 123 ETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--T 177
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVT 251
++ +GT + APE K+D++S G+ +EL G P P L+
Sbjct: 178 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP 237
Query: 252 WATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVK 305
P P L+G Y C+ E FRP ++K
Sbjct: 238 KNNP------------PTLEGNY----SKPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 16/165 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+++ L+H+ LV L + + EF GSL D L +G + P ++D+ +
Sbjct: 59 NLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP-KLIDFSAQ 117
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+ A G+ Y+ K + IHRD+R++NVL+ E KIADF L+ D ++
Sbjct: 118 I------AEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIED---NEYT 165
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
R F + APE G T KS+V+SFG++L E++T G+ P
Sbjct: 166 AREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDWM 133
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +M
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYM 117
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M
Sbjct: 118 -----ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDT 166
Query: 194 HSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
++ F + APE + + KSDV++FGV+L E+ T
Sbjct: 167 YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 13/161 (8%)
Query: 78 VSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVR 137
+ L H ++V LLG C +L+ L ++ +GSL D + +G G P +L+W
Sbjct: 69 IGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALG--PQLLLNW----- 120
Query: 138 IAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTR 197
V A+G+ YL E ++HR++ + NVLL + ++ADF +++ P +L +
Sbjct: 121 -GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSE 176
Query: 198 VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
+ A E G+ T +SDV+S+GV + EL+T G +P
Sbjct: 177 AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDWM 133
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +M
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYM 118
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M
Sbjct: 119 -----ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL---MTGDT 167
Query: 194 HSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
++ F + APE + + KSDV++FGV+L E+ T
Sbjct: 168 YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 135
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 136 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 188
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 189 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+V+ +KH NLV+LLG C + EF T G+L D L R+ + VL +M
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYM- 323
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
A + +EYL +K + IHR++ + N L+ E+ K+ADF LS M +
Sbjct: 324 ----ATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL---MTGDTY 373
Query: 195 STRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ F + APE + + KSDV++FGV+L E+ T
Sbjct: 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 42 MKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 102 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 149
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 240 H 240
Sbjct: 210 Q 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDW 132
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLY 361
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M A + +EYL +K + IHR++ + N L+ E+ K+ADF LS M
Sbjct: 362 M-----ATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL---MTGD 410
Query: 193 LHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
++ F + APE + + KSDV++FGV+L E+ T
Sbjct: 411 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 109
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 110 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 162
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 163 RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 97/240 (40%), Gaps = 26/240 (10%)
Query: 73 QLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDW 132
Q ++ + H N+V L+G C + + E G L +GA+ L
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR----TEGAR----LRV 212
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
T +++ DAA G+EYL K IHRD+ + N L+ E KI+DF +S + D
Sbjct: 213 KTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXA 269
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTW 252
+ APE G+ + +SDV+SFG++L E SL
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF---------------SLGAS 314
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
P LS + ++ V+ + C YE RP+ S + + LQ + K
Sbjct: 315 PYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ +S+ H N+V V + L + + GS+ DI+ +G VLD T
Sbjct: 64 IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDEST 122
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLS---NQAPDMAA 191
I + GLEYLH+ Q IHRD+++ N+LL ED +IADF +S D+
Sbjct: 123 IATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179
Query: 192 RLHSTRVLGTFGYHAPE-YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT + APE K+D++SFG+ +EL TG P
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 126
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 127 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 179
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 180 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 46 TCQVEESYPSHENER-------LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNL 98
T V+ +Y + + E+ L+ + D+ + + +S+ H N+V V +
Sbjct: 23 TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE 82
Query: 99 RVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSII 158
L + + GS+ DI+ +G VLD T I + GLEYLH+ Q I
Sbjct: 83 LWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---I 138
Query: 159 HRDIRSSNVLLFEDFKAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYA-MTGQ 214
HRD+++ N+LL ED +IADF +S D+ +GT + APE
Sbjct: 139 HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG 198
Query: 215 LTQKSDVYSFGVVLLELLTGRKP 237
K+D++SFG+ +EL TG P
Sbjct: 199 YDFKADIWSFGITAIELATGAAP 221
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 102 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 149
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 240 H 240
Sbjct: 210 Q 210
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH--GRKGVQGAQPGPVLDW 132
+V+ +KH NLV+LLG C + EF T G+L D L R+ V VL +
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLY 319
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M A + +EYL +K + IHR++ + N L+ E+ K+ADF LS M
Sbjct: 320 M-----ATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL---MTGD 368
Query: 193 LHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
++ F + APE + + KSDV++FGV+L E+ T
Sbjct: 369 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 40 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 99
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 100 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 147
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 148 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
Query: 240 H 240
Sbjct: 208 Q 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 109
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 110 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 162
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 163 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 H 240
Sbjct: 209 Q 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 H 240
Sbjct: 209 Q 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 114
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 115 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 167
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 168 RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 H 240
Sbjct: 209 Q 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 112
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 113 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 165
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 H 240
Sbjct: 209 Q 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 H 240
Sbjct: 209 Q 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 H 240
Sbjct: 209 Q 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 114
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 115 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 167
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 168 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 102 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 149
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 240 H 240
Sbjct: 210 Q 210
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 102 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 149
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 240 H 240
Sbjct: 210 Q 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 102 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 149
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 240 H 240
Sbjct: 210 Q 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 102 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 149
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 240 H 240
Sbjct: 210 Q 210
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 H 240
Sbjct: 209 Q 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 96 GNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQP 155
G L + E+ +L DI+H GP+ + + DA + L + H Q
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTE--------GPMTPKRA-IEVIADACQALNFSH---QN 135
Query: 156 SIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQ 214
IIHRD++ +N+L+ K+ DF ++ D + T V+GT Y +PE A
Sbjct: 136 GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDS 195
Query: 215 LTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
+ +SDVYS G VL E+LTG P P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 109
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 110 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 162
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 H 240
Sbjct: 209 Q 209
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 97/240 (40%), Gaps = 26/240 (10%)
Query: 73 QLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDW 132
Q ++ + H N+V L+G C + + E G L +GA+ L
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR----TEGAR----LRV 212
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
T +++ DAA G+EYL K IHRD+ + N L+ E KI+DF +S + D
Sbjct: 213 KTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTW 252
+ APE G+ + +SDV+SFG++L E SL
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF---------------SLGAS 314
Query: 253 ATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLK 312
P LS + ++ V+ + C YE RP+ S + + LQ + K
Sbjct: 315 PYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 109
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 110 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 162
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 163 RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 42 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 102 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 149
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 150 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 240 H 240
Sbjct: 210 Q 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 H 240
Sbjct: 209 Q 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 58 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 108
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 109 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 161
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 162 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 109
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 110 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 162
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 163 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 H 240
Sbjct: 209 Q 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 H 240
Sbjct: 209 Q 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 41 MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 100
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 101 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 148
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 149 GLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
Query: 240 HTMPRGQQ 247
Q+
Sbjct: 209 QPSDSXQE 216
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 110
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 111 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 163
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 114
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 115 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 167
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 168 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V V+ L+H N+++ +G + E+ G+L I+ K + P W
Sbjct: 58 VKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII---KSMDSQYP-----WSQ 109
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
RV A D A G+ YLH +IIHRD+ S N L+ E+ +ADF L+ D +
Sbjct: 110 RVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166
Query: 195 STR------------VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
R V+G + APE +K DV+SFG+VL E++ GR D
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 61 LKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+K + P++ K+ + + L HEN+V+ G+ EGN++ L E+ + G L D + G
Sbjct: 42 MKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG 101
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+ P P R G+ YLH I HRDI+ N+LL E KI+DF
Sbjct: 102 M----PEP-----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDF 149
Query: 181 NLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL-TQKSDVYSFGVVLLELLTGRKPVD 239
L+ ++ GT Y APE + + DV+S G+VL +L G P D
Sbjct: 150 GLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
Query: 240 H 240
Sbjct: 210 Q 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 94/222 (42%), Gaps = 35/222 (15%)
Query: 23 LDKGPEDDLYLKKRVKMRRWLCC-----TCQVEESYPSHENERLKSPKNYPDDEKQLVSV 77
L KG ++YL R K R+++ Q+E++ H+ R V +
Sbjct: 13 LGKGKFGNVYLA-REKQRKFILALKVLFKAQLEKAGVEHQLRRE-------------VEI 58
Query: 78 VSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVR 137
S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 59 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQRTAT 109
Query: 138 IAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTR 197
+ A L Y H K +IHRDI+ N+LL + KIADF S AP T
Sbjct: 110 YITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRTT 162
Query: 198 VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E G L L + PG P L
Sbjct: 72 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ K +HRD+ + N ++ DF KI DF ++ + A
Sbjct: 132 M--IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYY 186
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + APE G T SD++SFGVVL E+ +
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 113
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 114 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 166
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 167 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 110
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 111 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS----R 163
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 164 RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 112
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 113 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 165
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSRFDEQR 113
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + + KIADF S AP
Sbjct: 114 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS----R 166
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD-HT 241
T + GT Y PE +K D++S GV+ E L G P + HT
Sbjct: 167 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 18/168 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
++ ++ V+V++ +KH N+V+ E + ++ G L ++ +KGV Q
Sbjct: 68 EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL-FQEDQ 126
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLS---NQ 185
+LDW ++ +A L+++H++ I+HRDI+S N+ L +D ++ DF ++ N
Sbjct: 127 ILDWFVQICLA------LKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
++A +GT Y +PE KSD+++ G VL EL T
Sbjct: 178 TVELA-----RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E G L L + PG P L
Sbjct: 72 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ K +HRD+ + N ++ DF KI DF ++ +
Sbjct: 132 M--IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + APE G T SD++SFGVVL E+ +
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E G L L + PG P L
Sbjct: 72 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ K +HRD+ + N ++ DF KI DF ++ +
Sbjct: 132 M--IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + APE G T SD++SFGVVL E+ +
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E G L L + PG P L
Sbjct: 69 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 128
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ K +HRD+ + N ++ DF KI DF ++ +
Sbjct: 129 M--IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 183
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + APE G T SD++SFGVVL E+ +
Sbjct: 184 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 96 GNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQP 155
G L + E+ +L DI+H GP+ + + DA + L + H Q
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTE--------GPMTPKRA-IEVIADACQALNFSH---QN 135
Query: 156 SIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQ 214
IIHRD++ +N+++ K+ DF ++ D + T V+GT Y +PE A
Sbjct: 136 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 215 LTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
+ +SDVYS G VL E+LTG P P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 96 GNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQP 155
G L + E+ +L DI+H GP+ + + DA + L + H Q
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTE--------GPMTPKRA-IEVIADACQALNFSH---QN 135
Query: 156 SIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQ 214
IIHRD++ +N+++ K+ DF ++ D + T V+GT Y +PE A
Sbjct: 136 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 215 LTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
+ +SDVYS G VL E+LTG P P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 96 GNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQP 155
G L + E+ +L DI+H GP+ + + DA + L + H Q
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTE--------GPMTPKRA-IEVIADACQALNFSH---QN 135
Query: 156 SIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQ 214
IIHRD++ +N+++ K+ DF ++ D + T V+GT Y +PE A
Sbjct: 136 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 215 LTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
+ +SDVYS G VL E+LTG P P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 96 GNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQP 155
G L + E+ +L DI+H GP+ + + DA + L + H Q
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTE--------GPMTPKRA-IEVIADACQALNFSH---QN 135
Query: 156 SIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQ 214
IIHRD++ +N+++ K+ DF ++ D + T V+GT Y +PE A
Sbjct: 136 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 215 LTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
+ +SDVYS G VL E+LTG P P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 135
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 136 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 188
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 189 RDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 111
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIA+F S AP
Sbjct: 112 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----R 164
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 165 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A G ++ L Q D
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL---------QKLSKFDEQR 114
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 115 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 167
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 168 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
+Q ++V+S+ + + G ++G+ + E+ GS D+L GP D
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA---------GP-FD 118
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ + +GL+YLH + + IHRDI+++NVLL E K+ADF ++ Q D
Sbjct: 119 EFQIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--T 173
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
++ +GT + APE K+D++S G+ +EL G P P
Sbjct: 174 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP 225
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 67 YPDDEKQLVS---VVSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQ 122
+ D+++ L+S ++S L +HEN+V LLG C G ++ E+ G L + L + V
Sbjct: 89 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVL 148
Query: 123 GAQPG-----PVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
P L + + A+G+ +L K + IHRD+ + NVLL AKI
Sbjct: 149 ETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKI 205
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
DF L+ + + + + APE T +SDV+S+G++L E+ +
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N ++ EDF KI DF ++ +
Sbjct: 140 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 50 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 108
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 109 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 158
Query: 181 NLSNQAPDMAARLHSTRVLGT--FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P + G ++APE + + SDV+SFGVVL EL T
Sbjct: 159 GLTKVLP-QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 12/176 (6%)
Query: 67 YPDDEKQLVS---VVSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQ 122
+ D+++ L+S ++S L +HEN+V LLG C G ++ E+ G L + L + V
Sbjct: 89 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVL 148
Query: 123 GAQPGPVLDWMTR-----VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
P + T + + A+G+ +L K + IHRD+ + NVLL AKI
Sbjct: 149 ETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKI 205
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
DF L+ + + + + APE T +SDV+S+G++L E+ +
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 111
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 112 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 164
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 165 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
++++ RGL YL EK Q I+HRD++ SN+L+ + K+ DF +S Q D A
Sbjct: 118 KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 171
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+GT Y APE + +SD++S G+ L+EL GR P+
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
+ + S L+H N++ + Y + L EFA G L+ L HGR D
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----------FDE 113
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ A L Y HE+ +IHRDI+ N+L+ + KIADF S AP + R
Sbjct: 114 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR 170
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++ GV+ E L G P D
Sbjct: 171 ----XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
+ + S L+H N++ + Y + L EFA G L+ L HGR D
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----------FDE 113
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ A L Y HE+ +IHRDI+ N+L+ + KIADF S AP + R
Sbjct: 114 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR 170
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++ GV+ E L G P D
Sbjct: 171 X----MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
+ + S L+H N++ + Y + L EFA G L+ L HGR D
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-----------FDE 114
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ A L Y HE+ +IHRDI+ N+L+ + KIADF S AP + R
Sbjct: 115 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR 171
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++ GV+ E L G P D
Sbjct: 172 X----MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 67 YPDDEKQLVS---VVSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQ 122
+ D+++ L+S ++S L +HEN+V LLG C G ++ E+ G L + L +
Sbjct: 81 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAD 140
Query: 123 -GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFN 181
+ G L+ + + A+G+ +L K + IHRD+ + NVLL AKI DF
Sbjct: 141 LDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFG 197
Query: 182 LSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ + + + + APE T +SDV+S+G++L E+ +
Sbjct: 198 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 112
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIA+F S AP
Sbjct: 113 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS----R 165
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 166 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLR--VLAYEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 48 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 106
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 107 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 156
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 157 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 49 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 107
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 108 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 157
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 158 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 112
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 113 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 165
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 166 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 67 YPDDEKQLVS---VVSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQ 122
+ D+++ L+S ++S L +HEN+V LLG C G ++ E+ G L + L +
Sbjct: 89 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAD 148
Query: 123 -GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFN 181
+ G L+ + + A+G+ +L K + IHRD+ + NVLL AKI DF
Sbjct: 149 LDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFG 205
Query: 182 LSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ + + + + APE T +SDV+S+G++L E+ +
Sbjct: 206 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLR--VLAYEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 50 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 108
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 109 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 158
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 81 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 139
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 140 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 189
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 190 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N ++ EDF KI DF ++ +
Sbjct: 130 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 184
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 185 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 50 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 108
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 109 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 158
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 96 GNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQP 155
G L + E+ +L DI+H GP+ + + DA + L + H Q
Sbjct: 105 GPLPYIVMEYVDGVTLRDIVH--------TEGPMTPKRA-IEVIADACQALNFSH---QN 152
Query: 156 SIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTR-VLGTFGYHAPEYAMTGQ 214
IIHRD++ +N+++ K+ DF ++ D + T V+GT Y +PE A
Sbjct: 153 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 212
Query: 215 LTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
+ +SDVYS G VL E+LTG P P
Sbjct: 213 VDARSDVYSLGCVLYEVLTGEPPFTGDSP 241
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 54 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 112
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 113 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 162
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 163 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 57 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 115
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 116 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 165
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 166 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 13/165 (7%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + +LKH +++EL Y + N L E G ++ L R V+ +M
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMH 119
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
++ G+ YLH I+HRD+ SN+LL + KIADF L+ Q M H
Sbjct: 120 QI------ITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK-MPHEKH 169
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
T + GT Y +PE A +SDV+S G + LL GR P D
Sbjct: 170 YT-LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 55 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 113
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 114 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 163
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 164 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 53 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 111
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 112 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 161
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 109
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 110 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 162
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N ++ EDF KI DF ++ +
Sbjct: 125 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL---------QKLSKFDEQR 109
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 110 TATYITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 162
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 163 RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 70 DEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG------------ 117
D ++ ++++ + N+V+LLG C G L +E+ G L++ L
Sbjct: 96 DFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHS 155
Query: 118 ----RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF 173
R V P P L ++ IA A G+ YL E+ +HRD+ + N L+ E+
Sbjct: 156 DLSTRARVSSPGPPP-LSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENM 211
Query: 174 KAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
KIADF LS + PE + T +SDV+++GVVL E+ +
Sbjct: 212 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
Query: 234 -GRKP 237
G +P
Sbjct: 272 YGLQP 276
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 56 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 114
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 115 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 164
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 165 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 109
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 110 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 162
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 163 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 110
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 111 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 163
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 164 RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N ++ EDF KI DF ++ +
Sbjct: 134 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 68 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 126
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 127 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 176
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 177 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+DE+ ++S+V+ H ++ + G + + ++ G L +L + P P
Sbjct: 54 NDERLMLSIVT---HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF----PNP 106
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD 188
V + A + LEYLH K II+RD++ N+LL ++ KI DF + PD
Sbjct: 107 VAKFY-----AAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ L GT Y APE T + D +SFG+++ E+L G P
Sbjct: 159 VTYXL-----CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L EF GSL + L K
Sbjct: 53 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK- 111
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 112 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 161
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 68 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 126
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 127 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 176
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 177 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 112
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 113 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 165
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 166 RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 61 LKSPKNYPDDEKQL--VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGR 118
LK D E+ + ++ +L + +V L+G C + +L E A G LH L G+
Sbjct: 45 LKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGK 103
Query: 119 KGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIA 178
+ + PV + + + G++YL EK + +HRD+ + NVLL AKI+
Sbjct: 104 R-----EEIPVSN---VAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKIS 152
Query: 179 DFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GR 235
DF LS +A ++ R G + ++APE + + +SDV+S+GV + E L+ G+
Sbjct: 153 DFGLS-KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 211
Query: 236 KP 237
KP
Sbjct: 212 KP 213
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSKFDEQR 112
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 113 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP------- 162
Query: 195 STR---VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
S+R + GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 163 SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E G L L + PG P L
Sbjct: 72 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ K +HRD+ + N ++ DF KI DF ++ +
Sbjct: 132 M--IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + APE G T SD++SFGVVL E+ +
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
+Q ++V+S+ + G ++ + E+ GS D+L +PGP L+
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL---------KPGP-LE 114
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
I + +GL+YLH + + IHRDI+++NVLL E K+ADF ++ Q D
Sbjct: 115 ETYIATILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD--T 169
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVT 251
++ +GT + APE K+D++S G+ +EL G P P L+
Sbjct: 170 QIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP 229
Query: 252 WATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVK 305
+P P L+G++ C+ + FRP ++K
Sbjct: 230 KNSP------------PTLEGQH----SKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E G L L + PG P L
Sbjct: 71 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 130
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ K +HRD+ + N ++ DF KI DF ++ +
Sbjct: 131 M--IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 185
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + APE G T SD++SFGVVL E+ +
Sbjct: 186 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 16/165 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
+V+ +KH NLV+LLG C + E+ G+L D L R+ + VL +M
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYM-- 135
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + +EYL +K + IHRD+ + N L+ E+ K+ADF LS M ++
Sbjct: 136 ---ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRL---MTGDTYT 186
Query: 196 TRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
F + APE + KSDV++FGV+L E+ T G P
Sbjct: 187 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 61 LKSPKNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
LK+ N P + +L++ V+ +L + +V ++G C E +L E A +G L+ L
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 120
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
+ V+ + + + G++YL E + +HRD+ + NVLL AKI
Sbjct: 121 NRHVKDKNI---------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKI 168
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
+DF LS +A + + G + ++APE + + KSDV+SFGV++ E + G
Sbjct: 169 SDFGLS-KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
Query: 235 RKP--------VDHTMPRGQQSLVTWATPRLSEDKVKQC 265
+KP V + +G++ PR D + C
Sbjct: 228 QKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 266
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 61 LKSPKNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
LK+ N P + +L++ V+ +L + +V ++G C E +L E A +G L+ L
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 120
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
+ V+ + + + G++YL E + +HRD+ + NVLL AKI
Sbjct: 121 NRHVKDKNI---------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKI 168
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
+DF LS +A + + G + ++APE + + KSDV+SFGV++ E + G
Sbjct: 169 SDFGLS-KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
Query: 235 RKP--------VDHTMPRGQQSLVTWATPRLSEDKVKQC 265
+KP V + +G++ PR D + C
Sbjct: 228 QKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 266
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L
Sbjct: 53 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH-- 110
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHRD+ + N+L+ + + KI DF
Sbjct: 111 ------AERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 161
Query: 181 NLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P D ++APE + + SDV+SFGVVL EL T
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLA--YEFATMGSLHDILHGRKG 120
S + + D ++ + ++ L+H+N+V+ G C R L E+ GSL D L K
Sbjct: 51 STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK- 109
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF 180
+D + ++ +G+EYL K IHR++ + N+L+ + + KI DF
Sbjct: 110 -------ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRNLATRNILVENENRVKIGDF 159
Query: 181 NLSNQAPDMAARLHSTRVLGT--FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
L+ P + + G ++APE + + SDV+SFGVVL EL T
Sbjct: 160 GLTKVLPQ-DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A +G+++ L Q D
Sbjct: 63 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL---------QKLSRFDEQR 113
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + + KIADF S AP ++R
Sbjct: 114 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRD 168
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD-HT 241
+ + GT Y PE +K D++S GV+ E L G P + HT
Sbjct: 169 T--LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHT 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 61 LKSPKNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
LK+ N P + +L++ V+ +L + +V ++G C E +L E A +G L+ L
Sbjct: 60 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 118
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
+ V+ + + + G++YL E + +HRD+ + NVLL AKI
Sbjct: 119 NRHVKDKNI---------IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKI 166
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
+DF LS +A + + G + ++APE + + KSDV+SFGV++ E + G
Sbjct: 167 SDFGLS-KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 225
Query: 235 RKP--------VDHTMPRGQQSLVTWATPRLSEDKVKQC 265
+KP V + +G++ PR D + C
Sbjct: 226 QKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 264
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 67 YPDDEKQLVS---VVSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK--G 120
+ D+++ L+S ++S L +HEN+V LLG C G ++ E+ G L + L ++ G
Sbjct: 89 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPG 148
Query: 121 VQGA-----QPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA 175
++ + P L + + A+G+ +L K + IHRD+ + NVLL A
Sbjct: 149 LEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVA 205
Query: 176 KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
KI DF L+ + + + + APE T +SDV+S+G++L E+ +
Sbjct: 206 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N ++ EDF KI DF ++ +
Sbjct: 140 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 61 LKSPKNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
LK+ N P + +L++ V+ +L + +V ++G C E +L E A +G L+ L
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 104
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
+ V+ + + + G++YL E + +HRD+ + NVLL AKI
Sbjct: 105 NRHVKDKNI---------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKI 152
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
+DF LS +A + + G + ++APE + + KSDV+SFGV++ E + G
Sbjct: 153 SDFGLS-KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 211
Query: 235 RKP--------VDHTMPRGQQSLVTWATPRLSEDKVKQC 265
+KP V + +G++ PR D + C
Sbjct: 212 QKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 250
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 61 LKSPKNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
LK+ N P + +L++ V+ +L + +V ++G C E +L E A +G L+ L
Sbjct: 52 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 110
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
+ V+ + + + G++YL E + +HRD+ + NVLL AKI
Sbjct: 111 NRHVKDKNI---------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKI 158
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
+DF LS +A + + G + ++APE + + KSDV+SFGV++ E + G
Sbjct: 159 SDFGLS-KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 217
Query: 235 RKP--------VDHTMPRGQQSLVTWATPRLSEDKVKQC 265
+KP V + +G++ PR D + C
Sbjct: 218 QKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 256
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 61 LKSPKNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
LK+ N P + +L++ V+ +L + +V ++G C E +L E A +G L+ L
Sbjct: 40 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 98
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
+ V+ + + + G++YL E + +HRD+ + NVLL AKI
Sbjct: 99 NRHVKDKNI---------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKI 146
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
+DF LS +A + + G + ++APE + + KSDV+SFGV++ E + G
Sbjct: 147 SDFGLS-KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 205
Query: 235 RKP--------VDHTMPRGQQSLVTWATPRLSEDKVKQC 265
+KP V + +G++ PR D + C
Sbjct: 206 QKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 244
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 61 LKSPKNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
LK+ N P + +L++ V+ +L + +V ++G C E +L E A +G L+ L
Sbjct: 42 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 100
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
+ V+ + + + G++YL E + +HRD+ + NVLL AKI
Sbjct: 101 NRHVKDKNI---------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKI 148
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
+DF LS +A + + G + ++APE + + KSDV+SFGV++ E + G
Sbjct: 149 SDFGLS-KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 207
Query: 235 RKP--------VDHTMPRGQQSLVTWATPRLSEDKVKQC 265
+KP V + +G++ PR D + C
Sbjct: 208 QKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 246
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 70/165 (42%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + S L+H N++ L GY + L E+A G ++ L Q D
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL---------QKLSKFDEQR 114
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ A L Y H K +IHRDI+ N+LL + KIADF S AP
Sbjct: 115 TATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 167
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++S GV+ E L G+ P +
Sbjct: 168 RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 61 LKSPKNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
LK+ N P + +L++ V+ +L + +V ++G C E +L E A +G L+ L
Sbjct: 46 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 104
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
+ V+ + + + G++YL E + +HRD+ + NVLL AKI
Sbjct: 105 NRHVKDKNI---------IELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKI 152
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
+DF LS +A + + G + ++APE + + KSDV+SFGV++ E + G
Sbjct: 153 SDFGLS-KALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 211
Query: 235 RKP--------VDHTMPRGQQSLVTWATPRLSEDKVKQC 265
+KP V + +G++ PR D + C
Sbjct: 212 QKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 250
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+S++ + ++V+ G + + E+ GS+ DI+ R +T
Sbjct: 75 ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-----------LT 123
Query: 135 RVRIAV---DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
IA +GLEYLH + IHRDI++ N+LL + AK+ADF ++ Q D A
Sbjct: 124 EDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMA 180
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLV- 250
+ + V+GT + APE +D++S G+ +E+ G+ P P ++
Sbjct: 181 KRNX--VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIP 238
Query: 251 -----TWATPRLSEDK----VKQCV 266
T+ P L D VKQC+
Sbjct: 239 TNPPPTFRKPELWSDNFTDFVKQCL 263
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 27/185 (14%)
Query: 69 DDEKQLVSVVSRLK----HENLVELLGYCVEGN------LRVLAYEFATMGSLHDILHGR 118
D+E+++ ++ LK H N+ G ++ N L EF GS+ D++
Sbjct: 62 DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT 121
Query: 119 KGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIA 178
KG + +W+ I + RGL +LH Q +IHRDI+ NVLL E+ + K+
Sbjct: 122 KGNTLKE-----EWI--AYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLV 171
Query: 179 DFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ-----LTQKSDVYSFGVVLLELLT 233
DF +S Q R ++ +GT + APE + KSD++S G+ +E+
Sbjct: 172 DFGVSAQLDRTVGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE 229
Query: 234 GRKPV 238
G P+
Sbjct: 230 GAPPL 234
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 23/246 (9%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVL--AYEFATMGSLHDILHGRKGVQGAQPGPV 129
KQ + ++ L HE++++ G C + L E+ +GSL D L P
Sbjct: 81 KQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----------PRHS 130
Query: 130 LDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDM 189
+ + A G+ YLH + IHRD+ + NVLL D KI DF L+ P+
Sbjct: 131 IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE- 186
Query: 190 AARLHSTRVLGT--FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQ 247
+ R G ++APE + SDV+SFGV L ELLT + P
Sbjct: 187 GHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFL 245
Query: 248 SLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKAL 307
L+ A +++ ++ + ++ + C + EA FRP ++
Sbjct: 246 ELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI--- 302
Query: 308 QPLLKS 313
P+LK+
Sbjct: 303 -PILKT 307
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N ++ EDF KI DF ++ +
Sbjct: 127 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N ++ EDF KI DF ++ +
Sbjct: 133 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N ++ EDF KI DF ++ +
Sbjct: 133 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N ++ EDF KI DF ++ +
Sbjct: 134 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N ++ EDF KI DF ++ +
Sbjct: 131 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 185
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 186 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 79 SRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGR------------KGVQGAQP 126
+RL+H N+V LLG + + + + + G LH+ L R + V+ A
Sbjct: 84 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ- 185
P V + A G+EYL ++H+D+ + NVL+++ KI+D L +
Sbjct: 144 PPDF-----VHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 186 -APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
A D L ++ L + APE M G+ + SD++S+GVVL E+ + G +P
Sbjct: 196 YAADYYKLLGNS--LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 79 SRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGR------------KGVQGAQP 126
+RL+H N+V LLG + + + + + G LH+ L R + V+ A
Sbjct: 67 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ- 185
P V + A G+EYL ++H+D+ + NVL+++ KI+D L +
Sbjct: 127 PPDF-----VHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 186 -APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
A D L ++ L + APE M G+ + SD++S+GVVL E+ + G +P
Sbjct: 179 YAADYYKLLGNS--LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG--VQGAQP 126
DD + V+ + L H NL+ L G + ++++ E A +GSL D L +G + G
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG--- 111
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA 186
T R AV A G+ YL K IHRD+ + N+LL KI DF L
Sbjct: 112 -------TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
Query: 187 P--DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
P D + R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 162 PQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG--VQGAQP 126
DD + V+ + L H NL+ L G + ++++ E A +GSL D L +G + G
Sbjct: 66 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG--- 121
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA 186
T R AV A G+ YL K IHRD+ + N+LL KI DF L
Sbjct: 122 -------TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
Query: 187 P--DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
P D + R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 172 PQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
+++ + H +LV LLG C+ ++ L + G L + +H K G+Q +L+W
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL--LLNW---- 145
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
V A+G+ YL E+ ++HRD+ + NVL+ KI DF L+ ++
Sbjct: 146 --CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 200
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
+ A E + T +SDV+S+GV + EL+T G KP D
Sbjct: 201 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N ++ EDF KI DF ++ +
Sbjct: 162 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 216
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 217 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E G L L + PG P L
Sbjct: 72 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ K +HR++ + N ++ DF KI DF ++ +
Sbjct: 132 M--IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + APE G T SD++SFGVVL E+ +
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 61 LKSPKNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
LK+ N P + +L++ V+ +L + +V ++G C E +L E A +G L+ L
Sbjct: 404 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 462
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
+ V+ + + + G++YL E + +HRD+ + NVLL AKI
Sbjct: 463 NRHVKDK---------NIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKI 510
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
+DF LS +A + + G + ++APE + + KSDV+SFGV++ E + G
Sbjct: 511 SDFGLS-KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 569
Query: 235 RKP--------VDHTMPRGQQSLVTWATPRLSEDKVKQC 265
+KP V + +G++ PR D + C
Sbjct: 570 QKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 608
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E G L L + PG P L
Sbjct: 73 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 132
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ K +HR++ + N ++ DF KI DF ++ +
Sbjct: 133 M--IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 187
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + APE G T SD++SFGVVL E+ +
Sbjct: 188 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 18/182 (9%)
Query: 61 LKSPKNYPDDEKQL--VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGR 118
LK D E+ + ++ +L + +V L+G C + +L E A G LH L G+
Sbjct: 371 LKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGK 429
Query: 119 KGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIA 178
+ + PV + + + G++YL EK + +HR++ + NVLL AKI+
Sbjct: 430 R-----EEIPVSN---VAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKIS 478
Query: 179 DFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GR 235
DF LS +A ++ R G + ++APE + + +SDV+S+GV + E L+ G+
Sbjct: 479 DFGLS-KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 537
Query: 236 KP 237
KP
Sbjct: 538 KP 539
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 61 LKSPKNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
LK+ N P + +L++ V+ +L + +V ++G C E +L E A +G L+ L
Sbjct: 405 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 463
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
+ V+ + + + G++YL E + +HRD+ + NVLL AKI
Sbjct: 464 NRHVKDK---------NIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKI 511
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
+DF LS +A + + G + ++APE + + KSDV+SFGV++ E + G
Sbjct: 512 SDFGLS-KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 570
Query: 235 RKP--------VDHTMPRGQQSLVTWATPRLSEDKVKQC 265
+KP V + +G++ PR D + C
Sbjct: 571 QKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 609
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
+++ + H +LV LLG C+ ++ L + G L + +H K G+Q +L+W
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL--LLNW---- 122
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
V A+G+ YL E+ ++HRD+ + NVL+ KI DF L+ ++
Sbjct: 123 --CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 177
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
+ A E + T +SDV+S+GV + EL+T G KP D
Sbjct: 178 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG--VQGAQP 126
DD + V+ + L H NL+ L G + ++++ E A +GSL D L +G + G
Sbjct: 60 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG--- 115
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA 186
T R AV A G+ YL K IHRD+ + N+LL KI DF L
Sbjct: 116 -------TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
Query: 187 P--DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
P D + R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 166 PQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG--VQGAQP 126
DD + V+ + L H NL+ L G + ++++ E A +GSL D L +G + G
Sbjct: 66 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG--- 121
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA 186
T R AV A G+ YL K IHRD+ + N+LL KI DF L
Sbjct: 122 -------TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
Query: 187 P--DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
P D + R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 172 PQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG--VQGAQP 126
DD + V+ + L H NL+ L G + ++++ E A +GSL D L +G + G
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG--- 111
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA 186
T R AV A G+ YL K IHRD+ + N+LL KI DF L
Sbjct: 112 -------TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
Query: 187 P--DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
P D + R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 162 PQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVL--AYEFATMGSLHDILHGRKGVQGAQPGPV 129
KQ + ++ L HE++++ G C + + L E+ +GSL D L P
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----------PRHS 113
Query: 130 LDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDM 189
+ + A G+ YLH + IHR++ + NVLL D KI DF L+ P+
Sbjct: 114 IGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE- 169
Query: 190 AARLHSTRVLGT--FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ R G ++APE + SDV+SFGV L ELLT
Sbjct: 170 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG--VQGAQP 126
DD + V+ + L H NL+ L G + ++++ E A +GSL D L +G + G
Sbjct: 60 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG--- 115
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA 186
T R AV A G+ YL K IHRD+ + N+LL KI DF L
Sbjct: 116 -------TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
Query: 187 P--DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
P D + R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 166 PQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG---PVLDW 132
SV+ ++V LLG +G ++ E T G L L + P P L
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M +++A + A G+ YL+ +HRD+ + N + EDF KI DF ++ +
Sbjct: 127 M--IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ L + +PE G T SDV+SFGVVL E+ T
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 20/174 (11%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKG--VQGAQP 126
DD + V+ + L H NL+ L G + ++++ E A +GSL D L +G + G
Sbjct: 56 DDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLG--- 111
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA 186
T R AV A G+ YL K IHRD+ + N+LL KI DF L
Sbjct: 112 -------TLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
Query: 187 P--DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
P D + R + F + APE T + SD + FGV L E+ T G++P
Sbjct: 162 PQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVL--AYEFATMGSLHDILHGRKGVQGAQPGPV 129
KQ + ++ L HE++++ G C + + L E+ +GSL D L P
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----------PRHS 113
Query: 130 LDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDM 189
+ + A G+ YLH + IHR++ + NVLL D KI DF L+ P+
Sbjct: 114 IGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE- 169
Query: 190 AARLHSTRVLGT--FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ R G ++APE + SDV+SFGV L ELLT
Sbjct: 170 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)
Query: 79 SRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI 138
S+L H+N+V ++ E + L E+ +L + + GP L T +
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--------GP-LSVDTAINF 116
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
G+++ H+ I+HRDI+ N+L+ + KI DF ++ +A + + V
Sbjct: 117 TNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIA-KALSETSLTQTNHV 172
Query: 199 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
LGT Y +PE A + +D+YS G+VL E+L G P +
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 21/185 (11%)
Query: 67 YPDDEKQLVS---VVSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH------ 116
+ D+++ L+S ++S L +HEN+V LLG C G ++ E+ G L + L
Sbjct: 74 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAM 133
Query: 117 -GRKGVQGAQP-------GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVL 168
G G P G L+ + + A+G+ +L K + IHRD+ + NVL
Sbjct: 134 LGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 190
Query: 169 LFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVL 228
L AKI DF L+ + + + + APE T +SDV+S+G++L
Sbjct: 191 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 250
Query: 229 LELLT 233
E+ +
Sbjct: 251 WEIFS 255
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 101 LAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHR 160
+ EF G+L + R+G + LD + + + +G++Y+H K +IHR
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEK-------LDKVLALELFEQITKGVDYIHSK---KLIHR 160
Query: 161 DIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSD 220
D++ SN+ L + + KI DF L + R TR GT Y +PE + ++ D
Sbjct: 161 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVD 217
Query: 221 VYSFGVVLLELL 232
+Y+ G++L ELL
Sbjct: 218 LYALGLILAELL 229
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ V+ K+ N+V L + G+ + E+ GSL D++ +D
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQ 117
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ-APDMAARL 193
+ + + LE+LH +IHRDI+S N+LL D K+ DF Q P+ + R
Sbjct: 118 IAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR- 173
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP-RGQQSLVTW 252
+ ++GT + APE K D++S G++ +E++ G P + P R + T
Sbjct: 174 --SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 253 ATPRLSE---------DKVKQCVD 267
TP L D + +C+D
Sbjct: 232 GTPELQNPEKLSAIFRDFLNRCLD 255
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+IAV + LE+LH K+ S+IHRD++ SNVL+ + K+ DF +S D A+ T
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK---T 211
Query: 197 RVLGTFGYHAPEYAMTGQLTQ-----KSDVYSFGVVLLELLTGRKPVDHTMPRGQQ--SL 249
G Y APE + +L Q KSD++S G+ ++EL R P D QQ +
Sbjct: 212 IDAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
Query: 250 VTWATPRLSEDK 261
V +P+L DK
Sbjct: 271 VEEPSPQLPADK 282
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
++++ +GL YL EK + I+HRD++ SN+L+ + K+ DF +S Q D A
Sbjct: 170 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 223
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
++++ +GL YL EK + I+HRD++ SN+L+ + K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD---MAAR 192
+ + ARG+EYL E+ +HRD+ + N +L E F K+ADF L+ D + +
Sbjct: 127 ISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMP 243
H L + A E T + T KSDV+SFGV+L ELLT G P H P
Sbjct: 184 QHRHARLPV-KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 26/149 (17%)
Query: 101 LAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAV------------DAARGLEY 148
L Y F T G L+ IL +G D TR+ V + A L++
Sbjct: 91 LHYAFQTEGKLYLILDFLRGG---------DLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH II+RD++ N+LL E+ K+ DF LS ++ D + +S GT Y APE
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPE 196
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
TQ +D +SFGV++ E+LTG P
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
++++ +GL YL EK + I+HRD++ SN+L+ + K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
++++ +GL YL EK + I+HRD++ SN+L+ + K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ V+ K+ N+V L + G+ + E+ GSL D++ +D
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQ 117
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ-APDMAARL 193
+ + + LE+LH +IHRDI+S N+LL D K+ DF Q P+ + R
Sbjct: 118 IAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR- 173
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP-RGQQSLVTW 252
+ ++GT + APE K D++S G++ +E++ G P + P R + T
Sbjct: 174 --STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 253 ATPRLSE---------DKVKQCVD 267
TP L D + +C+D
Sbjct: 232 GTPELQNPEKLSAIFRDFLNRCLD 255
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
++++ +GL YL EK + I+HRD++ SN+L+ + K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
++++ +GL YL EK + I+HRD++ SN+L+ + K+ DF +S Q D A
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 161
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 83 HENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGR--------------KGVQGAQPGP 128
HEN+V LLG C L +E+ G L + L + K ++ +
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD 188
VL + + A A+G+E+L K S +HRD+ + NVL+ KI DF L+
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ + + APE G T KSDV+S+G++L E+ +
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
++++ +GL YL EK + I+HRD++ SN+L+ + K+ DF +S Q D A
Sbjct: 135 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 188
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 26/149 (17%)
Query: 101 LAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAV------------DAARGLEY 148
L Y F T G L+ IL +G D TR+ V + A L++
Sbjct: 91 LHYAFQTEGKLYLILDFLRGG---------DLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH II+RD++ N+LL E+ K+ DF LS ++ D + +S GT Y APE
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPE 196
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
TQ +D +SFGV++ E+LTG P
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G G L ++ E+ GSL L G M
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ--------FTIMQL 153
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLS---NQAPDMAAR 192
V + G+ YL + +HRD+ + NVL+ + K++DF LS PD A
Sbjct: 154 VGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
++ + APE + SDV+SFGVV+ E+L G +P
Sbjct: 211 TTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 26/149 (17%)
Query: 101 LAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAV------------DAARGLEY 148
L Y F T G L+ IL +G D TR+ V + A L++
Sbjct: 92 LHYAFQTEGKLYLILDFLRGG---------DLFTRLSKEVMFTEEDVKFYLAELALALDH 142
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH II+RD++ N+LL E+ K+ DF LS ++ D + +S GT Y APE
Sbjct: 143 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPE 197
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
TQ +D +SFGV++ E+LTG P
Sbjct: 198 VVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ V+ K+ N+V L + G+ + E+ GSL D++ +D
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQ 117
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ-APDMAARL 193
+ + + LE+LH +IHRDI+S N+LL D K+ DF Q P+ + R
Sbjct: 118 IAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR- 173
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP-RGQQSLVTW 252
+ ++GT + APE K D++S G++ +E++ G P + P R + T
Sbjct: 174 --SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 253 ATPRL 257
TP L
Sbjct: 232 GTPEL 236
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
++++ +GL YL EK I+HRD++ SN+L+ + K+ DF +S Q D A
Sbjct: 127 KVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----N 180
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+GT Y +PE + +SD++S G+ L+E+ GR P+
Sbjct: 181 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ V+ K+ N+V L + G+ + E+ GSL D++ +D
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQ 118
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ-APDMAARL 193
+ + + LE+LH +IHRDI+S N+LL D K+ DF Q P+ + R
Sbjct: 119 IAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR- 174
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP-RGQQSLVTW 252
+ ++GT + APE K D++S G++ +E++ G P + P R + T
Sbjct: 175 --SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 232
Query: 253 ATPRL 257
TP L
Sbjct: 233 GTPEL 237
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 132
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDM-A 190
+ + + A+G++YL K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 133 DL--IGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEX 187
Query: 191 ARLHS-TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+H+ T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 188 XSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 27/187 (14%)
Query: 68 PDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGA 124
P + + L+S V+ ++ H ++++L G C + +L E+A GSL L + V
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG-- 124
Query: 125 QPGPV------------------LDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSN 166
PG + L + A ++G++YL E S++HRD+ + N
Sbjct: 125 -PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---SLVHRDLAARN 180
Query: 167 VLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGV 226
+L+ E K KI+DF LS + + + ++ + A E T +SDV+SFGV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 227 VLLELLT 233
+L E++T
Sbjct: 241 LLWEIVT 247
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
V ++ L H N+V+L L E+A+ G + D L HGR + A+
Sbjct: 62 VRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR------- 114
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
++ R V A ++Y H+K I+HRD+++ N+LL D KIADF SN+ + +
Sbjct: 115 -SKFRQIVSA---VQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGK 166
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-KSDVYSFGVVLLELLTGRKPVD 239
L + G+ Y APE + + DV+S GV+L L++G P D
Sbjct: 167 LDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 21/200 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL-HGRKGVQGAQPGPVLDWM 133
V ++ +HEN+VE+ + G+ + EF G+L DI+ H R + +
Sbjct: 199 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE---------QI 249
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
V +AV A L LH + +IHRDI+S ++LL D + K++DF Q R
Sbjct: 250 AAVCLAVLQA--LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 303
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP-RGQQSLVTW 252
++GT + APE + D++S G++++E++ G P + P + + +
Sbjct: 304 -RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 362
Query: 253 ATPRLSEDKVKQCVDPKLKG 272
PRL K V P LKG
Sbjct: 363 LPPRL---KNLHKVSPSLKG 379
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
V ++ L H N+V+L L E+A+ G + D L HGR + A+
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------- 116
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ R V A ++Y H+K I+HRD+++ N+LL D KIADF SN+ +
Sbjct: 117 -AKFRQIVSA---VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNK 168
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-KSDVYSFGVVLLELLTGRKPVD 239
L + G+ Y APE + + DV+S GV+L L++G P D
Sbjct: 169 LDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 22/187 (11%)
Query: 59 ERLKSPKNYPDDEKQLVSVVSRLKHEN---LVELLGYCVEGNLRVLAYEFATMGSLHDIL 115
++++ N ++++ L+ + LK + +V+ G + +A E MG+ + L
Sbjct: 56 KQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL--MGTCAEKL 113
Query: 116 HGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA 175
+K +QG P +L MT V + L YL EK +IHRD++ SN+LL E +
Sbjct: 114 --KKRMQGPIPERILGKMT-----VAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQI 164
Query: 176 KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQ-----KSDVYSFGVVLLE 230
K+ DF +S + D A+ R G Y APE T+ ++DV+S G+ L+E
Sbjct: 165 KLCDFGISGRLVDDKAK---DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221
Query: 231 LLTGRKP 237
L TG+ P
Sbjct: 222 LATGQFP 228
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G G L ++ E+ GSL L G M
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ--------FTIMQL 153
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLS---NQAPDMAAR 192
V + G+ YL + +HRD+ + NVL+ + K++DF LS PD A
Sbjct: 154 VGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
++ + APE + SDV+SFGVV+ E+L G +P
Sbjct: 211 TTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 133
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA- 190
+ + + A+G++YL K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 134 DL--IGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
Query: 191 -ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 189 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
V ++ L H N+V+L L E+A+ G + D L HGR + A+
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------- 116
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ R V A ++Y H+K I+HRD+++ N+LL D KIADF SN+ +
Sbjct: 117 -AKFRQIVSA---VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNK 168
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-KSDVYSFGVVLLELLTGRKPVD 239
L + G+ Y APE + + DV+S GV+L L++G P D
Sbjct: 169 LDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 76 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 125
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA- 190
+ + + A+G++YL K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 126 DL--IGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 180
Query: 191 -ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 181 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
V ++ L H N+V+L L E+A+ G + D L HGR + A+
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------- 116
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ R V A ++Y H+K I+HRD+++ N+LL D KIADF SN+ +
Sbjct: 117 -AKFRQIVSA---VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNK 168
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-KSDVYSFGVVLLELLTGRKPVD 239
L + G+ Y APE + + DV+S GV+L L++G P D
Sbjct: 169 LDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 102 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 151
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA- 190
+ + + A+G++YL K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 152 DL--IGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 206
Query: 191 -ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 207 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 132
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA- 190
+ + + A+G++YL K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 133 DL--IGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 187
Query: 191 -ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 188 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 133
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA- 190
+ + + A+G++YL K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 134 DL--IGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
Query: 191 -ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 189 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 103 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 152
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA- 190
+ + + A+G++YL K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 153 DL--IGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 207
Query: 191 -ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 208 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 131
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA- 190
+ + + A+G++YL K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 132 DL--IGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 186
Query: 191 -ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 187 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 81 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 130
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA- 190
+ + + A+G++YL K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 131 DL--IGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 185
Query: 191 -ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 186 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 26/149 (17%)
Query: 101 LAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAV------------DAARGLEY 148
L Y F T G L+ IL +G D TR+ V + A GL++
Sbjct: 95 LHYAFQTEGKLYLILDFLRGG---------DLFTRLSKEVMFTEEDVKFYLAELALGLDH 145
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH II+RD++ N+LL E+ K+ DF LS +A D + +S GT Y APE
Sbjct: 146 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAPE 200
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ +D +S+GV++ E+LTG P
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+I + + L +L E ++ IIHRDI+ SN+LL K+ DF +S Q D A+ T
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---T 183
Query: 197 RVLGTFGYHAPEYAMTGQLTQ----KSDVYSFGVVLLELLTGRKP 237
R G Y APE Q +SDV+S G+ L EL TGR P
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 79 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 128
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD--M 189
+ + + A+G++YL K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 129 DL--IGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183
Query: 190 AARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 75 VSVVSRLKHENLVELLGYCV-EGNLRV-LAYEFATMGSLHDILHGRKGVQGAQPGPVLDW 132
+ ++ L HE++V+ G C +G V L E+ +GSL D L P +
Sbjct: 62 IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGL 111
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ A G+ YLH + IHR + + NVLL D KI DF L+ P+
Sbjct: 112 AQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE-GHE 167
Query: 193 LHSTRVLGT--FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ R G ++APE + SDV+SFGV L ELLT
Sbjct: 168 YYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 75 VSVVSRLKHENLVELLGYCV-EGNLRV-LAYEFATMGSLHDILHGRKGVQGAQPGPVLDW 132
+ ++ L HE++V+ G C +G V L E+ +GSL D L P +
Sbjct: 61 IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----------PRHCVGL 110
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ A G+ YLH + IHR + + NVLL D KI DF L+ P+
Sbjct: 111 AQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE-GHE 166
Query: 193 LHSTRVLGT--FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ R G ++APE + SDV+SFGV L ELLT
Sbjct: 167 YYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 21/200 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL-HGRKGVQGAQPGPVLDWM 133
V ++ +HEN+VE+ + G+ + EF G+L DI+ H R + +
Sbjct: 122 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE---------QI 172
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
V +AV A L LH + +IHRDI+S ++LL D + K++DF Q R
Sbjct: 173 AAVCLAVLQA--LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 226
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP-RGQQSLVTW 252
++GT + APE + D++S G++++E++ G P + P + + +
Sbjct: 227 -RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 285
Query: 253 ATPRLSEDKVKQCVDPKLKG 272
PRL K V P LKG
Sbjct: 286 LPPRL---KNLHKVSPSLKG 302
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
V ++ L H N+V+L L E+A+ G + D L HGR + A+
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR------- 117
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
++ R V A ++Y H+K I+HRD+++ N+LL D KIADF SN+ + +
Sbjct: 118 -SKFRQIVSA---VQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGK 169
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-KSDVYSFGVVLLELLTGRKPVD 239
L + G Y APE + + DV+S GV+L L++G P D
Sbjct: 170 LDA--FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
++++ +GL YL EK + I+HRD++ SN+L+ + K+ DF +S Q D A
Sbjct: 111 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA----N 164
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + +SD++S G+ L+E+ GR P
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 20/168 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
V ++ L H N+V+L L E+A+ G + D L HGR + A+
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------- 117
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ R V A ++Y H+K I+HRD+++ N+LL D KIADF SN+ + +
Sbjct: 118 -AKFRQIVSA---VQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFT-VGNK 169
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-KSDVYSFGVVLLELLTGRKPVD 239
L + G+ Y APE + + DV+S GV+L L++G P D
Sbjct: 170 LDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
A + GL++LH K I++RD++ N+LL +D KIADF + + +M +
Sbjct: 125 AAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE--NMLGDAKTNEF 179
Query: 199 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
GT Y APE + + D +SFGV+L E+L G+ P
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
V ++ L H N+V+L L E+A+ G + D L HGR + A+
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------- 116
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ R V A ++Y H+K I+HRD+++ N+LL D KIADF SN+ +
Sbjct: 117 -AKFRQIVSA---VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNK 168
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-KSDVYSFGVVLLELLTGRKPVD 239
L G+ Y APE + + DV+S GV+L L++G P D
Sbjct: 169 LDE--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
V ++ L H N+V+L L E+A+ G + D L HGR + A+
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR------- 116
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ R V A ++Y H+K I+HRD+++ N+LL D KIADF SN+ +
Sbjct: 117 -AKFRQIVSA---VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNK 168
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-KSDVYSFGVVLLELLTGRKPVD 239
L + G Y APE + + DV+S GV+L L++G P D
Sbjct: 169 LDA--FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D A +TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D A +TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 131
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD--M 189
+ + + A+G+++L K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 132 DL--IGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 186
Query: 190 AARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 187 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 133
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD--M 189
+ + + A+G+++L K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 134 DL--IGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 190 AARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 189 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D A +TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 183
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 21/200 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL-HGRKGVQGAQPGPVLDWM 133
V ++ +HEN+VE+ + G+ + EF G+L DI+ H R + +
Sbjct: 77 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ---------I 127
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
V +AV + L LH + +IHRDI+S ++LL D + K++DF Q R
Sbjct: 128 AAVCLAV--LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 181
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP-RGQQSLVTW 252
++GT + APE + D++S G++++E++ G P + P + + +
Sbjct: 182 -RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 240
Query: 253 ATPRLSEDKVKQCVDPKLKG 272
PRL K V P LKG
Sbjct: 241 LPPRL---KNLHKVSPSLKG 257
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 192
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD--M 189
+ + + A+G+++L K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 193 DL--IGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247
Query: 190 AARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 134
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD--M 189
+ + + A+G+++L K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 135 DL--IGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEF 189
Query: 190 AARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 190 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 21/200 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL-HGRKGVQGAQPGPVLDWM 133
V ++ +HEN+VE+ + G+ + EF G+L DI+ H R + +
Sbjct: 79 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ---------I 129
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
V +AV A L LH + +IHRDI+S ++LL D + K++DF Q R
Sbjct: 130 AAVCLAVLQA--LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 183
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP-RGQQSLVTW 252
++GT + APE + D++S G++++E++ G P + P + + +
Sbjct: 184 -RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 242
Query: 253 ATPRLSEDKVKQCVDPKLKG 272
PRL K V P LKG
Sbjct: 243 LPPRL---KNLHKVSPSLKG 259
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 89 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 138
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD--M 189
+ + + A+G+++L K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 139 DL--IGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 193
Query: 190 AARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 194 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 134
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD--M 189
+ + + A+G+++L K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 135 DL--IGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 189
Query: 190 AARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 190 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
A + GL++LH K I++RD++ N+LL +D KIADF + + +M +
Sbjct: 124 AAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE--NMLGDAKTNXF 178
Query: 199 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
GT Y APE + + D +SFGV+L E+L G+ P
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 22/168 (13%)
Query: 77 VVSRLKHENLVELLGYCV--EGN-LRVLAYEFATMGSLHDILHG--RKGVQGAQPGPVLD 131
++ H N++ LLG C+ EG+ L VL Y + HG R ++ P +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPY----------MKHGDLRNFIRNETHNPTVK 133
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD--M 189
+ + + A+G+++L K +HRD+ + N +L E F K+ADF L+ D
Sbjct: 134 DL--IGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 188
Query: 190 AARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + T + A E T + T KSDV+SFGV+L EL+T P
Sbjct: 189 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 68 PDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGA 124
P + + L+S V+ ++ H ++++L G C + +L E+A GSL L + V
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG-- 124
Query: 125 QPGPV------------------LDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSN 166
PG + L + A ++G++YL E ++HRD+ + N
Sbjct: 125 -PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARN 180
Query: 167 VLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGV 226
+L+ E K KI+DF LS + + + ++ + A E T +SDV+SFGV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 227 VLLELLT 233
+L E++T
Sbjct: 241 LLWEIVT 247
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 32/176 (18%)
Query: 73 QLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDW 132
Q ++++ +L H N+V+L+ + N L F + GPV++
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQ----------------GPVMEV 128
Query: 133 MTRVRIAVDAAR--------GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN 184
T ++ D AR G+EYLH + IIHRDI+ SN+L+ ED KIADF +SN
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSN 185
Query: 185 QAPDMAARLHSTRVLGTFGYHAPE-YAMTGQL--TQKSDVYSFGVVLLELLTGRKP 237
+ A L +T +GT + APE + T ++ + DV++ GV L + G+ P
Sbjct: 186 EFKGSDALLSNT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ V+ K+ N+V L + G+ + E+ GSL D++ +D
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV----------TETCMDEGQ 118
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ-APDMAARL 193
+ + + LE+LH +IHR+I+S N+LL D K+ DF Q P+ + R
Sbjct: 119 IAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR- 174
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP-RGQQSLVTW 252
+ ++GT + APE K D++S G++ +E++ G P + P R + T
Sbjct: 175 --STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 232
Query: 253 ATPRL 257
TP L
Sbjct: 233 GTPEL 237
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 19/183 (10%)
Query: 61 LKSPKNYPDD---EKQLVSVVS--RLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL 115
+K+ KN D EK L ++ + H ++V+L+G E + ++ E T+G L L
Sbjct: 43 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL 101
Query: 116 HGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA 175
RK LD + + A + L YL K +HRDI + NVL+ +
Sbjct: 102 QVRKFS--------LDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 150
Query: 176 KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
K+ DF LS D S L + APE + T SDV+ FGV + E+L G
Sbjct: 151 KLGDFGLSRYMEDSTXXKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 209
Query: 235 RKP 237
KP
Sbjct: 210 VKP 212
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 21/200 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL-HGRKGVQGAQPGPVLDWM 133
V ++ +HEN+VE+ + G+ + EF G+L DI+ H R + +
Sbjct: 68 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ---------I 118
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
V +AV + L LH + +IHRDI+S ++LL D + K++DF Q R
Sbjct: 119 AAVCLAV--LQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 172
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP-RGQQSLVTW 252
++GT + APE + D++S G++++E++ G P + P + + +
Sbjct: 173 -RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 231
Query: 253 ATPRLSEDKVKQCVDPKLKG 272
PRL K V P LKG
Sbjct: 232 LPPRL---KNLHKVSPSLKG 248
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+IAV + LE+LH K+ S+IHRD++ SNVL+ + K+ DF +S D A+
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 197 RVLGTFGYHAPEYAMTGQLTQ-----KSDVYSFGVVLLELLTGRKPVDHTMPRGQQ--SL 249
G Y APE + +L Q KSD++S G+ ++EL R P D QQ +
Sbjct: 171 ---GCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
Query: 250 VTWATPRLSEDK 261
V +P+L DK
Sbjct: 227 VEEPSPQLPADK 238
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ EF GSL L G V+ +
Sbjct: 86 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-----QFTVIQLVGM 140
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+R A G++YL + + +HRD+ + N+L+ + K++DF LS D +
Sbjct: 141 LR---GIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 196 TRVLGT---FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
T LG + APE + T SDV+S+G+V+ E+++ G +P
Sbjct: 195 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL-HGRKGVQGAQPGPVLDWM 133
V ++ +HEN+VE+ + G+ + EF G+L DI+ H R +
Sbjct: 72 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------- 124
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
+ + + L LH + +IHRDI+S ++LL D + K++DF Q R
Sbjct: 125 ----VCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR- 176
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP-RGQQSLVTW 252
++GT + APE + D++S G++++E++ G P + P + + +
Sbjct: 177 -RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 235
Query: 253 ATPRLSEDKVKQCVDPKLKG 272
PRL K V P LKG
Sbjct: 236 LPPRL---KNLHKVSPSLKG 252
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 68 PDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGA 124
P + + L+S V+ ++ H ++++L G C + +L E+A GSL L + V
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG-- 124
Query: 125 QPGPV------------------LDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSN 166
PG + L + A ++G++YL E ++HRD+ + N
Sbjct: 125 -PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARN 180
Query: 167 VLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGV 226
+L+ E K KI+DF LS + + + ++ + A E T +SDV+SFGV
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 227 VLLELLT 233
+L E++T
Sbjct: 241 LLWEIVT 247
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 21/172 (12%)
Query: 75 VSVVSRLKHENLVEL------LGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+ ++ +L H N+V L +L +LA E+ G L L+ + G + GP
Sbjct: 64 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP 123
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQ 185
+ ++ D + L YLHE IIHRD++ N++L + KI D
Sbjct: 124 IRTLLS------DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGY--- 171
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
A ++ T +GT Y APE + T D +SFG + E +TG +P
Sbjct: 172 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
V + L H N+V+L L E+A+ G + D L HGR + A+
Sbjct: 64 VRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEAR------- 116
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ R V A ++Y H+K I+HRD+++ N+LL D KIADF SN+ +
Sbjct: 117 -AKFRQIVSA---VQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFT-FGNK 168
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-KSDVYSFGVVLLELLTGRKPVD 239
L + G Y APE + + DV+S GV+L L++G P D
Sbjct: 169 LDA--FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 21/172 (12%)
Query: 75 VSVVSRLKHENLVEL------LGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+ ++ +L H N+V L +L +LA E+ G L L+ + G + GP
Sbjct: 63 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP 122
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQ 185
+ ++ D + L YLHE IIHRD++ N++L + KI D
Sbjct: 123 IRTLLS------DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGY--- 170
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
A ++ T +GT Y APE + T D +SFG + E +TG +P
Sbjct: 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR---VRI 138
H N+V LLG C + G ++ EF G+L L ++ D++T +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAARLHS 195
+ A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD R
Sbjct: 150 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY-VRKGD 205
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 206 ARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V++ + + ++ LLG C+ ++++ + G L D + K G+Q +L+W
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 132
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
V A+G+ YL ++ ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 133 --CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 187
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
+ A E + T +SDV+S+GV + EL+T G KP D
Sbjct: 188 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL-HGRKGVQGAQPGPVLDWM 133
V ++ H+N+V++ + G+ + EF G+L DI+ H R +
Sbjct: 93 VVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI--------- 143
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
+ + R L YLH + +IHRDI+S ++LL D + K++DF Q +
Sbjct: 144 --ATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK- 197
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
++GT + APE + D++S G++++E++ G P
Sbjct: 198 -RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRV-LAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
V+SRL H V+L +C + + ++ +A G L + + G + TR
Sbjct: 90 VMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTR 140
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 141 FYTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 196
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 197 NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 73 EGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 131
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 132 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 180
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 181 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 240
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 241 VTVWELMTFGSKPYD 255
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 100
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 101 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 149
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 210 VTVWELMTFGSKPYD 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 99
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 100 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 148
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 209 VTVWELMTFGSKPYD 223
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 45 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 103
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W ++ A+G+ YL ++ ++HRD+ +
Sbjct: 104 MPFGCLLDYVREHKDNIGSQY--LLNWCVQI------AKGMNYLEDR---RLVHRDLAAR 152
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 153 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 212
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 213 VTVWELMTFGSKPYD 227
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR---VRI 138
H N+V LLG C + G ++ EF G+L L ++ D++T +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAARLHS 195
+ A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD R
Sbjct: 150 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD 205
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 206 ARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 97
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 98 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 100
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 101 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 149
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 210 VTVWELMTFGSKPYD 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 100
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 101 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 149
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 210 VTVWELMTFGSKPYD 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V++ + + ++ LLG C+ ++++ + G L D + K G+Q +L+W
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY--LLNW---- 147
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
V A+G+ YL ++ ++HRD+ + NVL+ KI DF L+ H+
Sbjct: 148 --CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
+ A E + T +SDV+S+GV + EL+T G KP D
Sbjct: 203 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 33 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 91
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 92 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 140
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 201 VTVWELMTFGSKPYD 215
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 53 YPSHENERL----KSPKNYPDD---EKQLVSVVS--RLKHENLVELLGYCVEGNLRVLAY 103
Y S EN L K+ KN D EK L ++ + H ++V+L+G E + ++
Sbjct: 36 YMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM- 94
Query: 104 EFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIR 163
E T+G L L RK LD + + A + L YL K +HRDI
Sbjct: 95 ELCTLGELRSFLQVRK--------YSLDLASLILYAYQLSTALAYLESK---RFVHRDIA 143
Query: 164 SSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYS 223
+ NVL+ + K+ DF LS D S L + APE + T SDV+
Sbjct: 144 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWM 202
Query: 224 FGVVLLELLT-GRKP 237
FGV + E+L G KP
Sbjct: 203 FGVCMWEILMHGVKP 217
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 61 LKSPKNYPDD---EKQLVSVVS--RLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL 115
+K+ KN D EK L ++ + H ++V+L+G E + ++ E T+G L L
Sbjct: 40 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL 98
Query: 116 HGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA 175
RK LD + + A + L YL K +HRDI + NVL+ +
Sbjct: 99 QVRKYS--------LDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 147
Query: 176 KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
K+ DF LS D + +++ + APE + T SDV+ FGV + E+L G
Sbjct: 148 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 206
Query: 235 RKP 237
KP
Sbjct: 207 VKP 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 53 YPSHENERL----KSPKNYPDD---EKQLVSVVS--RLKHENLVELLGYCVEGNLRVLAY 103
Y S EN L K+ KN D EK L ++ + H ++V+L+G E + ++
Sbjct: 59 YMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM- 117
Query: 104 EFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIR 163
E T+G L L RK LD + + A + L YL K +HRDI
Sbjct: 118 ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLESK---RFVHRDIA 166
Query: 164 SSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYS 223
+ NVL+ + K+ DF LS D + +++ + APE + T SDV+
Sbjct: 167 ARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESINFRRFTSASDVWM 225
Query: 224 FGVVLLELLT-GRKP 237
FGV + E+L G KP
Sbjct: 226 FGVCMWEILMHGVKP 240
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 104
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 105 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 153
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 214 VTVWELMTFGSKPYD 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 104
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 105 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 153
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 214 VTVWELMTFGSKPYD 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 97
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 98 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++ L +
Sbjct: 43 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQL 101
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 102 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 150
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 151 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 210
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 211 VTVWELMTFGSKPYD 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++ L +
Sbjct: 40 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQL 98
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 99 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 147
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 207
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 208 VTVWELMTFGSKPYD 222
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 61 LKSPKNYPDD---EKQLVSVVS--RLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL 115
+K+ KN D EK L ++ + H ++V+L+G E + ++ E T+G L L
Sbjct: 43 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL 101
Query: 116 HGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA 175
RK LD + + A + L YL K +HRDI + NVL+ +
Sbjct: 102 QVRKYS--------LDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 150
Query: 176 KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
K+ DF LS D + +++ + APE + T SDV+ FGV + E+L G
Sbjct: 151 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 209
Query: 235 RKP 237
KP
Sbjct: 210 VKP 212
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 53 YPSHENERL----KSPKNYPDD---EKQLVSVVS--RLKHENLVELLGYCVEGNLRVLAY 103
Y S EN L K+ KN D EK L ++ + H ++V+L+G E + ++
Sbjct: 31 YMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM- 89
Query: 104 EFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIR 163
E T+G L L RK LD + + A + L YL K +HRDI
Sbjct: 90 ELCTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYLESK---RFVHRDIA 138
Query: 164 SSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYS 223
+ NVL+ + K+ DF LS D + +++ + APE + T SDV+
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESINFRRFTSASDVWM 197
Query: 224 FGVVLLELLT-GRKP 237
FGV + E+L G KP
Sbjct: 198 FGVCMWEILMHGVKP 212
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 97
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 98 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 61 LKSPKNYPDD---EKQLVSVVS--RLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL 115
+K+ KN D EK L ++ + H ++V+L+G E + ++ E T+G L L
Sbjct: 45 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL 103
Query: 116 HGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA 175
RK LD + + A + L YL K +HRDI + NVL+ +
Sbjct: 104 QVRK--------YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 152
Query: 176 KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
K+ DF LS D + +++ + APE + T SDV+ FGV + E+L G
Sbjct: 153 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 211
Query: 235 RKP 237
KP
Sbjct: 212 VKP 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 97
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 98 MPFGXLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++ L +
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQL 99
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 100 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 148
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 149 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 209 VTVWELMTFGSKPYD 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++ L +
Sbjct: 42 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQL 100
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 101 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 149
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 150 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 209
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 210 VTVWELMTFGSKPYD 224
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++ L +
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQL 104
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 105 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 153
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 154 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 214 VTVWELMTFGSKPYD 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRW 194
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 19/183 (10%)
Query: 61 LKSPKNYPDD---EKQLVSVVS--RLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL 115
+K+ KN D EK L ++ + H ++V+L+G E + ++ E T+G L L
Sbjct: 46 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL 104
Query: 116 HGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA 175
RK LD + + A + L YL K +HRDI + NVL+ +
Sbjct: 105 QVRK--------YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 153
Query: 176 KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
K+ DF LS D S L + APE + T SDV+ FGV + E+L G
Sbjct: 154 KLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 212
Query: 235 RKP 237
KP
Sbjct: 213 VKP 215
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++ L +
Sbjct: 40 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQL 98
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 99 MPFGXLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 147
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 148 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 207
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 208 VTVWELMTFGSKPYD 222
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRW 194
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRW 192
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++ L +
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQL 97
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 98 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRW 198
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRW 194
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRW 192
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGXVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 81 LKHENLVELLGYCVEGNLR-----VLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
H N++ LLG C+E + + ++ F G LH L + G + P+ T
Sbjct: 93 FSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL---QTL 149
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
++ VD A G+EYL + + +HRD+ + N +L +D +ADF LS +
Sbjct: 150 LKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ A E T KSDV++FGV + E+ T
Sbjct: 207 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKG----VQGAQPGPVLDWMTR-- 135
H N+V LLG C + G ++ EF G+L L ++ + A D++T
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 136 -VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ + A+G+E+L + IHRD+ + N+LL E KI DF L+ +
Sbjct: 150 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ APE T +SDV+SFGV+L E+ +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKG--VQGAQPGPVL-DWMTR--- 135
H N+V LLG C + G ++ EF G+L L ++ V P + D++T
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+ + A+G+E+L + IHRD+ + N+LL E KI DF L+ +
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ APE T +SDV+SFGV+L E+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 194
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKG----VQGAQPGPVLDWMTR-- 135
H N+V LLG C + G ++ EF G+L L ++ + A D++T
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 136 -VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAA 191
+ + A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD
Sbjct: 150 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-XV 205
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 206 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 198
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 199
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 189
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 199
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 184
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 192
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 199
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 135 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 186
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 29/240 (12%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++ + H N++ L G + ++ E+ G+L L + G VL + +
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG-----EFSVLQLVGML 153
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
R A G++YL + +HRD+ + N+L+ + K++DF LS D ++T
Sbjct: 154 R---GIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 207
Query: 197 RVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWAT 254
+ APE + T SDV+SFG+V+ E++T G +P W
Sbjct: 208 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY-------------W-- 252
Query: 255 PRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKSP 314
LS +V + ++ + C Q E RP + +V L L+++P
Sbjct: 253 -ELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 183
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 197
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 210
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 184
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 193
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 192
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 183
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 189
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 207
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 189
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKG----VQGAQPGPVLDWMTR-- 135
H N+V LLG C + G ++ EF G+L L ++ + A D++T
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 136 -VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAA 191
+ + A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD
Sbjct: 152 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-V 207
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 208 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMTGYVATRW 189
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 183
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 13/152 (8%)
Query: 89 LLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEY 148
LLG C+ ++ L + G L D + +G G+Q +L+W ++ A+G+ Y
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQD--LLNWCMQI------AKGMSY 134
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
L + ++HRD+ + NVL+ KI DF L+ H+ + A E
Sbjct: 135 LEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
+ + T +SDV+S+GV + EL+T G KP D
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD-----EMTGYVATRW 193
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 134 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 185
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 206
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 207
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKG----VQGAQPGPVLDWMTR-- 135
H N+V LLG C + G ++ EF G+L L ++ + A D++T
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 136 -VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAA 191
+ + A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD
Sbjct: 150 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-V 205
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 206 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 206
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V ++ +L H N+++L + + + E T G L D + RK
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA------- 124
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSN---QAPD 188
RI G+ Y+H + +I+HRD++ N+LL +D KI DF LS Q
Sbjct: 125 --RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
M R+ GT Y APE + G +K DV+S GV+L LL+G P
Sbjct: 180 MKDRI------GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 193
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 193
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 19/183 (10%)
Query: 61 LKSPKNYPDD---EKQLVSVVS--RLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL 115
+K+ KN D EK L ++ + H ++V+L+G E + ++ E T+G L L
Sbjct: 423 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL 481
Query: 116 HGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA 175
RK LD + + A + L YL K +HRDI + NVL+ +
Sbjct: 482 QVRKFS--------LDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCV 530
Query: 176 KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
K+ DF LS D + +++ + APE + T SDV+ FGV + E+L G
Sbjct: 531 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589
Query: 235 RKP 237
KP
Sbjct: 590 VKP 592
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKG--VQGAQPGPVLDWMTR---V 136
H N+V LLG C + G ++ EF G+L L ++ V D++T +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+ A+G+E+L + IHRD+ + N+LL E KI DF L+ +
Sbjct: 152 XYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
+ APE T +SDV+SFGV+L E+ +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V ++ +L H N+++L + + + E T G L D + RK
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA------- 124
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSN---QAPD 188
RI G+ Y+H + +I+HRD++ N+LL +D KI DF LS Q
Sbjct: 125 --RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
M R+ GT Y APE + G +K DV+S GV+L LL+G P
Sbjct: 180 MKDRI------GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 19/183 (10%)
Query: 61 LKSPKNYPDD---EKQLVSVVS--RLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL 115
+K+ KN D EK L ++ + H ++V+L+G E + ++ E T+G L L
Sbjct: 43 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL 101
Query: 116 HGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA 175
RK LD + + A + L YL K +HRDI + NVL+
Sbjct: 102 QVRKFS--------LDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCV 150
Query: 176 KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
K+ DF LS D + +++ + APE + T SDV+ FGV + E+L G
Sbjct: 151 KLGDFGLSRYMED-STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 209
Query: 235 RKP 237
KP
Sbjct: 210 VKP 212
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 36 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 94
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A G+ YL ++ ++HRD+ +
Sbjct: 95 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAEGMNYLEDR---RLVHRDLAAR 143
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF L+ H+ + A E + T +SDV+S+G
Sbjct: 144 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 203
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 204 VTVWELMTFGSKPYD 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDW 132
V ++ L H N+V+L L E+A+ G + D L HG + A+
Sbjct: 57 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEAR------- 109
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+ R V A ++Y H+K I+HRD+++ N+LL D KIADF SN+ +
Sbjct: 110 -AKFRQIVSA---VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNK 161
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-KSDVYSFGVVLLELLTGRKPVD 239
L + G+ Y APE + + DV+S GV+L L++G P D
Sbjct: 162 LDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N+V L G G ++ EF G+L L G V+ +
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG-----QFTVIQLVGM 150
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+R A G+ YL + +HRD+ + N+L+ + K++DF LS D +++
Sbjct: 151 LR---GIAAGMRYLADM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT 204
Query: 196 TRVLGTFG-----YHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
T T G + APE + T SDV+S+G+V+ E+++ G +P
Sbjct: 205 T----TGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKG----VQGAQPGPVLDWMTR-- 135
H N+V LLG C + G ++ EF G+L L ++ + A D++T
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 136 -VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAA 191
+ + A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD
Sbjct: 141 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XV 196
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 197 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
D+ Q + +L H LV+ G C + + E+ + G L + L R +G +P
Sbjct: 48 DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQ 105
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPD 188
+L+ + D G+ +L IHRD+ + N L+ D K++DF ++ D
Sbjct: 106 LLE------MCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
+ S + APE + + KSDV++FG+++ E+ + G+ P D
Sbjct: 157 -DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+ L HE LV+L G C + + E+ G L + L R+ Q +L+
Sbjct: 56 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLE----- 108
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+ D +EYL K +HRD+ + N L+ + K++DF LS D +++
Sbjct: 109 -MCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTS 161
Query: 197 RVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
V F + PE M + + KSD+++FGV++ E+ + G+ P +
Sbjct: 162 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKG----VQGAQPGPVLDWMTR-- 135
H N+V LLG C + G ++ EF G+L L ++ + A D++T
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 136 -VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAA 191
+ + A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD
Sbjct: 141 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XV 196
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 197 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+ L HE LV+L G C + + E+ G L + L R+ Q +L+
Sbjct: 52 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLE----- 104
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+ D +EYL K +HRD+ + N L+ + K++DF LS D +++
Sbjct: 105 -MCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTS 157
Query: 197 RVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
V F + PE M + + KSD+++FGV++ E+ + G+ P +
Sbjct: 158 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKG----VQGAQPGPVLDWMTR-- 135
H N+V LLG C + G ++ EF G+L L ++ + A D++T
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 136 -VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAA 191
+ + A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD
Sbjct: 141 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-V 196
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 197 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 114
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 115 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 170
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 171 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKG----VQGAQPGPVLDWMTR-- 135
H N+V LLG C + G ++ EF G+L L ++ + A D++T
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 136 -VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAA 191
+ + A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD
Sbjct: 187 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-V 242
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 243 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+ L HE LV+L G C + + E+ G L + L R+ Q +L+
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLE----- 109
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+ D +EYL K +HRD+ + N L+ + K++DF LS D +++
Sbjct: 110 -MCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTS 162
Query: 197 RVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
V F + PE M + + KSD+++FGV++ E+ + G+ P +
Sbjct: 163 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 31/175 (17%)
Query: 75 VSVVSRLKHENLVELLGYCVEG-----------------NLRVLAYEFATMGSLHDILHG 117
V +++L H N+V G C +G + EF G+L +
Sbjct: 55 VKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
R+G + LD + + + +G++Y+H K +I+RD++ SN+ L + + KI
Sbjct: 114 RRGEK-------LDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKI 163
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELL 232
DF L + R S GT Y +PE + ++ D+Y+ G++L ELL
Sbjct: 164 GDFGLVTSLKNDGKRXRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR--------KIGSFDETCTRF 136
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE ++ SD+++ G ++ +L+ G P
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + +H N++ L G ++ EF G+L L G V+ +
Sbjct: 69 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG-----QFTVIQLVGM 123
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+R A G+ YL E S +HRD+ + N+L+ + K++DF LS + ++
Sbjct: 124 LR---GIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE 177
Query: 196 TRVLGT---FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
T LG + APE + T SD +S+G+V+ E+++ G +P
Sbjct: 178 TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D +TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----W 207
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+IAV + LE+LH K+ S+IHRD++ SNVL+ + K DF +S D A+
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 197 RVLGTFGYHAPEYAMTGQLTQ-----KSDVYSFGVVLLELLTGRKPVDHTMPRGQQ--SL 249
G Y APE + +L Q KSD++S G+ +EL R P D QQ +
Sbjct: 198 ---GCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQV 253
Query: 250 VTWATPRLSEDK 261
V +P+L DK
Sbjct: 254 VEEPSPQLPADK 265
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D +TR
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----W 210
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+ L HE LV+L G C + + E+ G L + L R+ Q +L+
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLE----- 124
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+ D +EYL K +HRD+ + N L+ + K++DF LS D +++
Sbjct: 125 -MCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTS 177
Query: 197 RVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
V F + PE M + + KSD+++FGV++ E+ + G+ P +
Sbjct: 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 83 HENLVELLGYCVE-GNLRVLAYEFATMGSLHDILHGRKG----VQGAQPGPVLDWMTR-- 135
H N+V LLG C + G ++ EF G+L L ++ + A D++T
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 136 -VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAA 191
+ + A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD
Sbjct: 141 LICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-V 196
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 197 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 113
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 114 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 169
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SNV + ED + +I DF L+ QA + T + T
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE-----EMTGYVATRW 185
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELL G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+ L HE LV+L G C + + E+ G L + L R+ Q +L+
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLE----- 115
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+ D +EYL K +HRD+ + N L+ + K++DF LS D +++
Sbjct: 116 -MCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTS 168
Query: 197 RVLGTF--GYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
V F + PE M + + KSD+++FGV++ E+ + G+ P +
Sbjct: 169 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+++ LKH+N+V+ LG E + E GSL +L ++ GP+ D
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR-------SKWGPLKDNEQ 122
Query: 135 RVRIAVDAA-RGLEYLHEKVQPSIIHRDIRSSNVLLFE-DFKAKIADFNLSNQAPDMAAR 192
+ GL+YLH+ I+HRDI+ NVL+ KI+DF S + +
Sbjct: 123 TIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179
Query: 193 LHSTRVLGTFGYHAPEYAMTG--QLTQKSDVYSFGVVLLELLTGRKP 237
+ GT Y APE G + +D++S G ++E+ TG+ P
Sbjct: 180 TET--FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+S+ L H+++V G+ + + + E SL ++ RK + P +
Sbjct: 72 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE----PEARYYL 127
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R G +YLH +IHRD++ N+ L ED + KI DF L+ + R
Sbjct: 128 R-----QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 179
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ + GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 180 T--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 53 YPSHENERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLH 112
Y + + +L S + P + +S++ LKHEN+V L N L +EF L
Sbjct: 32 YVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLK 90
Query: 113 DILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFED 172
+ R V G L+ + + + +GL + HE I+HRD++ N+L+ +
Sbjct: 91 KYMDSRT-VGNTPRGLELNLVKYFQWQL--LQGLAFCHEN---KILHRDLKPQNLLINKR 144
Query: 173 FKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLEL 231
+ K+ DF L+ +A + S+ V+ T Y AP+ M + S D++S G +L E+
Sbjct: 145 GQLKLGDFGLA-RAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEM 202
Query: 232 LTGR 235
+TG+
Sbjct: 203 ITGK 206
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SNV + ED + +I DF L+ QA + T + T
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EMTGYVATRW 193
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELL G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+S+ L H+++V G+ + + + E SL + LH R+ A P +
Sbjct: 68 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYL 123
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R G +YLH +IHRD++ N+ L ED + KI DF L+ + R
Sbjct: 124 R-----QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 175
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ + GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 176 T--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 112
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 113 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+S+ L H+++V G+ + + + E SL + LH R+ A P +
Sbjct: 68 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYL 123
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R G +YLH +IHRD++ N+ L ED + KI DF L+ + R
Sbjct: 124 R-----QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-- 173
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + +H N++ L G ++ EF G+L L G V+ +
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG-----QFTVIQLVGM 121
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+R A G+ YL E S +HRD+ + N+L+ + K++DF LS + ++
Sbjct: 122 LR---GIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY 175
Query: 196 TRVLGT---FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
T LG + APE + T SD +S+G+V+ E+++ G +P
Sbjct: 176 TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 60 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 111
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 112 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 167
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L RK AQ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ----FTVIQL 149
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 150 VGMLRGIASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 252
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 253 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 314 P 314
P
Sbjct: 311 P 311
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SNV + ED + +I DF L+ QA + T + T
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE-----EMTGYVATRW 193
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELL G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V ++ +L H N+++L + + + E T G L D + RK
Sbjct: 72 VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA------- 124
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSN---QAPD 188
RI G+ Y+H + +I+HRD++ N+LL +D KI DF LS Q
Sbjct: 125 --RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
M R+ GT Y APE + G +K DV+S GV+L LL+G P
Sbjct: 180 MKDRI------GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 137
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 138 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 194 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 136
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 137
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 138 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 194 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 134
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 135 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 69/165 (41%), Gaps = 16/165 (9%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ + + L H N++ L Y + L E+A G L+ L Q D
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL---------QKSCTFDEQR 124
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
I + A L Y H K +IHRDI+ N+LL + KIADF S AP L
Sbjct: 125 TATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LR 177
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y PE +K D++ GV+ ELL G P +
Sbjct: 178 RKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 139
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 140 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 195
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 16/184 (8%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 136
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPR 256
+GT Y +PE + SD+++ G ++ +L+ G P G + L+ +
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP----FRAGNEGLIFAKIIK 248
Query: 257 LSED 260
L D
Sbjct: 249 LEYD 252
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI D+ L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+S+ L H+++V G+ + + + E SL ++ RK + + L +
Sbjct: 90 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI- 148
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
G +YLH +IHRD++ N+ L ED + KI DF L+ + R
Sbjct: 149 --------VLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-- 195
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 196 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 81/183 (44%), Gaps = 19/183 (10%)
Query: 61 LKSPKNYPDD---EKQLVSVVS--RLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL 115
+K+ KN D EK L ++ + H ++V+L+G E + ++ E T+G L L
Sbjct: 423 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL 481
Query: 116 HGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA 175
RK LD + + A + L YL K +HRDI + NVL+
Sbjct: 482 QVRKFS--------LDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCV 530
Query: 176 KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-G 234
K+ DF LS D S L + APE + T SDV+ FGV + E+L G
Sbjct: 531 KLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589
Query: 235 RKP 237
KP
Sbjct: 590 VKP 592
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 134
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 135 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+++ LKH+N+V+ LG E + E GSL +L ++ GP+ D
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR-------SKWGPLKDNEQ 108
Query: 135 RVRIAVDAA-RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA--KIADFNLSNQAPDMAA 191
+ GL+YLH+ I+HRDI+ NVL+ + KI+DF S + +
Sbjct: 109 TIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINP 164
Query: 192 RLHSTRVLGTFGYHAPEYAMTG--QLTQKSDVYSFGVVLLELLTGRKP 237
+ GT Y APE G + +D++S G ++E+ TG+ P
Sbjct: 165 CTET--FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 134
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 135 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+S+ L H+++V G+ + + + E SL ++ RK + P +
Sbjct: 92 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE----PEARYYL 147
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R G +YLH +IHRD++ N+ L ED + KI DF L+ + R
Sbjct: 148 R-----QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-- 197
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 16/184 (8%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 136
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPR 256
+GT Y +PE + SD+++ G ++ +L+ G P G + L+ +
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP----FRAGNEGLIFAKIIK 248
Query: 257 LSED 260
L D
Sbjct: 249 LEYD 252
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 136
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 136
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 137 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+ L HE LV+L G C + + E+ G L + L R+ Q +L+
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLE----- 124
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+ D +EYL K +HRD+ + N L+ + K++DF LS D T
Sbjct: 125 -MCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----EET 176
Query: 197 RVLGT---FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
+G+ + PE M + + KSD+++FGV++ E+ + G+ P +
Sbjct: 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 134
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 135 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+S+ L H+++V G+ + + + E SL + LH R+ A P +
Sbjct: 66 ISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRK---ALTEPEARYYL 121
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R G +YLH +IHRD++ N+ L ED + KI DF L+ + R
Sbjct: 122 R-----QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-- 171
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y APE + + DV+S G ++ LL G+ P +
Sbjct: 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 25/232 (10%)
Query: 17 PGYFVRLDKGPEDDLYLKKRV----KMRRWLCCTCQVEESYPSHENERLKSPKNYPDDEK 72
PG FV+ D Y +RV + C ++ + + + K D E
Sbjct: 19 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 78
Query: 73 QL--VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVL 130
L V ++ +L H N+++L + + L E T G L D + RK
Sbjct: 79 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA--- 135
Query: 131 DWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL---FEDFKAKIADFNLSNQAP 187
RI G+ Y+H + I+HRD++ N+LL +D +I DF LS
Sbjct: 136 ------RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH-- 184
Query: 188 DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
A +GT Y APE + G +K DV+S GV+L LL+G P +
Sbjct: 185 -FEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 39 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 97
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 98 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 146
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF + H+ + A E + T +SDV+S+G
Sbjct: 147 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 206
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 207 VTVWELMTFGSKPYD 221
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 67 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 118
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 119 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 174
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L RK AQ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ----FTVIQL 149
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 150 VGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 252
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 253 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 314 P 314
P
Sbjct: 311 P 311
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 81 LKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPVLDWMTRVRI 138
+H ++++L + + E+ + G L D + +GR LD R+
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-----------LDEKESRRL 121
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
G++Y H + ++HRD++ NVLL AKIADF LSN D S
Sbjct: 122 FQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC-- 176
Query: 199 LGTFGYHAPEYAMTGQLTQ--KSDVYSFGVVLLELLTGRKPVD 239
G+ Y APE ++G+L + D++S GV+L LL G P D
Sbjct: 177 -GSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 46 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 104
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 105 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 153
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF + H+ + A E + T +SDV+S+G
Sbjct: 154 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 213
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 214 VTVWELMTFGSKPYD 228
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 16/119 (13%)
Query: 127 GPVLDWMTRVRIAVDAAR----------GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
G + D++ R R +DA+R G+EYL + +HRD+ + N+L+ + K
Sbjct: 99 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVK 155
Query: 177 IADFNLSNQAPDMAARLHSTRVLGT--FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ P + + R G ++APE +++SDV+SFGVVL EL T
Sbjct: 156 IADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++++ +
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QL 99
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 100 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 148
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF + H+ + A E + T +SDV+S+G
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 209 VTVWELMTFGSKPYD 223
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L RK AQ +
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ----FTVIQL 147
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 148 VGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 250
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 251 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308
Query: 314 P 314
P
Sbjct: 309 P 309
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L RK AQ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ----FTVIQL 149
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 150 VGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 252
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 253 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 314 P 314
P
Sbjct: 311 P 311
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L RK AQ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ----FTVIQL 149
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 150 VGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 252
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 253 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 314 P 314
P
Sbjct: 311 P 311
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ EF GSL L G V+ +
Sbjct: 60 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-----QFTVIQLVGM 114
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+R A G++YL + + +HR + + N+L+ + K++DF LS D +
Sbjct: 115 LR---GIAAGMKYLADM---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 196 TRVLGT---FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
T LG + APE + T SDV+S+G+V+ E+++ G +P
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L RK AQ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ----FTVIQL 149
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 150 VGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 252
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 253 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 314 P 314
P
Sbjct: 311 P 311
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 16/119 (13%)
Query: 127 GPVLDWMTRVRIAVDAAR----------GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
G + D++ R R +DA+R G+EYL + +HRD+ + N+L+ + K
Sbjct: 111 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVK 167
Query: 177 IADFNLSNQAPDMAARLHSTRVLGT--FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ P + + R G ++APE +++SDV+SFGVVL EL T
Sbjct: 168 IADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 16/119 (13%)
Query: 127 GPVLDWMTRVRIAVDAAR----------GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
G + D++ R R +DA+R G+EYL + +HRD+ + N+L+ + K
Sbjct: 98 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVK 154
Query: 177 IADFNLSNQAPDMAARLHSTRVLGT--FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ P + + R G ++APE +++SDV+SFGVVL EL T
Sbjct: 155 IADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 133
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 134 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++ L +
Sbjct: 43 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQL 101
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 102 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 150
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF + H+ + A E + T +SDV+S+G
Sbjct: 151 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 210
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 211 VTVWELMTFGSKPYD 225
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 26/236 (11%)
Query: 13 HAPSPGYFVRLDKGPEDDLYLKKRV----KMRRWLCCTCQVEESYPSHENERLKSPKNYP 68
HA +PG FV+ D Y +RV + C ++ + + + K
Sbjct: 10 HA-TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT 68
Query: 69 DDEKQL--VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQP 126
D E L V ++ +L H N+++L + + L E T G L D + RK
Sbjct: 69 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 128
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL---FEDFKAKIADFNLS 183
RI G+ Y+H + I+HRD++ N+LL +D +I DF LS
Sbjct: 129 A---------RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Query: 184 NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
A +GT Y APE + G +K DV+S GV+L LL+G P +
Sbjct: 177 TH---FEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 99/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L G V+ +
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG-----QFTVIQLVGM 129
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+R + G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 130 LR---GISAGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + APE + T SDV+S+G+V+ E+++ G +P W
Sbjct: 184 TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY-------------W- 229
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
++ V + V+ + C Q E RP +V L L+++
Sbjct: 230 --EMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRN 287
Query: 314 P 314
P
Sbjct: 288 P 288
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++ L +
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQL 99
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 100 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 148
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF + H+ + A E + T +SDV+S+G
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 209 VTVWELMTFGSKPYD 223
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Query: 75 VSVVSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH-GRKGVQGAQPGPVL-- 130
+ V+S L H N+V LLG C G ++ E+ G L + L R ++ P +
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 159
Query: 131 ------DWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN 184
D + + A+G+ +L K + IHRD+ + N+LL KI DF L+
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 216
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
+ + + + APE T +SDV+S+G+ L EL + G P
Sbjct: 217 HIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 127 GPVLDWMTRVRIAVDAAR----------GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAK 176
G + D++ R R +DA+R G+EYL + +HRD+ + N+L+ + K
Sbjct: 95 GCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVK 151
Query: 177 IADFNLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
IADF L+ P D + ++APE +++SDV+SFGVVL EL T
Sbjct: 152 IADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+SRL H V+L + +A G L + + G + TR
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--------KIGSFDETCTRF 133
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
A + LEYLH K IIHRD++ N+LL ED +I DF + + + +
Sbjct: 134 YTA-EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+GT Y +PE + SD+++ G ++ +L+ G P
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 57 ENERLKSP--------KNYPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRVLAYEF 105
E E++K P P K+++ V++ + + ++ LLG C+ ++ L +
Sbjct: 41 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQL 99
Query: 106 ATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSS 165
G L D + K G+Q +L+W V A+G+ YL ++ ++HRD+ +
Sbjct: 100 MPFGCLLDYVREHKDNIGSQY--LLNW------CVQIAKGMNYLEDR---RLVHRDLAAR 148
Query: 166 NVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFG 225
NVL+ KI DF + H+ + A E + T +SDV+S+G
Sbjct: 149 NVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 208
Query: 226 VVLLELLT-GRKPVD 239
V + EL+T G KP D
Sbjct: 209 VTVWELMTFGSKPYD 223
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI DF L+ D T + T
Sbjct: 165 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRW 216
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + D++S G ++ ELLTGR
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+S++ L H N+V L+ L +EF + + G+Q +Q
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQ--------- 120
Query: 135 RVRIAV-DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
++I + RG+ + H Q I+HRD++ N+L+ D K+ADF L+ +A + R
Sbjct: 121 -IKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRS 175
Query: 194 HSTRVLGTFGYHAPEYAM-TGQLTQKSDVYSFGVVLLELLTGR 235
++ V+ T Y AP+ M + + + D++S G + E++TG+
Sbjct: 176 YTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Query: 75 VSVVSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH-GRKGVQGAQPGPVL-- 130
+ V+S L H N+V LLG C G ++ E+ G L + L R ++ P +
Sbjct: 100 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 159
Query: 131 ------DWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN 184
D + + A+G+ +L K + IHRD+ + N+LL KI DF L+
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 216
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
+ + + + APE T +SDV+S+G+ L EL + G P
Sbjct: 217 DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 17/163 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+S++ L H N+V L+ L +EF + + G+Q +Q
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQ--------- 120
Query: 135 RVRIAV-DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
++I + RG+ + H Q I+HRD++ N+L+ D K+ADF L+ +A + R
Sbjct: 121 -IKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLA-RAFGIPVRS 175
Query: 194 HSTRVLGTFGYHAPEYAM-TGQLTQKSDVYSFGVVLLELLTGR 235
++ V+ T Y AP+ M + + + D++S G + E++TG+
Sbjct: 176 YTHEVV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Query: 75 VSVVSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH-GRKGVQGAQPGPVL-- 130
+ V+S L H N+V LLG C G ++ E+ G L + L R ++ P +
Sbjct: 95 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 154
Query: 131 ------DWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN 184
D + + A+G+ +L K + IHRD+ + N+LL KI DF L+
Sbjct: 155 DDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 211
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
+ + + + APE T +SDV+S+G+ L EL + G P
Sbjct: 212 DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 26/236 (11%)
Query: 13 HAPSPGYFVRLDKGPEDDLYLKKRV----KMRRWLCCTCQVEESYPSHENERLKSPKNYP 68
HA +PG FV+ D Y +RV + C ++ + + + K
Sbjct: 33 HA-TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT 91
Query: 69 DDEKQL--VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQP 126
D E L V ++ +L H N+++L + + L E T G L D + RK
Sbjct: 92 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 151
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL---FEDFKAKIADFNLS 183
RI G+ Y+H + I+HRD++ N+LL +D +I DF LS
Sbjct: 152 A---------RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 199
Query: 184 NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
A +GT Y APE + G +K DV+S GV+L LL+G P +
Sbjct: 200 TH---FEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 99/236 (41%), Gaps = 26/236 (11%)
Query: 13 HAPSPGYFVRLDKGPEDDLYLKKRV----KMRRWLCCTCQVEESYPSHENERLKSPKNYP 68
HA +PG FV+ D Y +RV + C ++ + + + K
Sbjct: 34 HA-TPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT 92
Query: 69 DDEKQL--VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQP 126
D E L V ++ +L H N+++L + + L E T G L D + RK
Sbjct: 93 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 152
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL---FEDFKAKIADFNLS 183
RI G+ Y+H + I+HRD++ N+LL +D +I DF LS
Sbjct: 153 ---------ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 200
Query: 184 NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
A +GT Y APE + G +K DV+S GV+L LL+G P +
Sbjct: 201 TH---FEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 17/192 (8%)
Query: 60 RLKSPKNYPDDEKQLVS---VVSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL 115
++ P + + + L+S V+S L H N+V LLG C G ++ E+ G L + L
Sbjct: 59 KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118
Query: 116 H-GRKGVQGAQPGPVL--------DWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSN 166
R ++ P + D + + A+G+ +L K + IHRD+ + N
Sbjct: 119 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 175
Query: 167 VLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGV 226
+LL KI DF L+ + + + + APE T +SDV+S+G+
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 235
Query: 227 VLLELLT-GRKP 237
L EL + G P
Sbjct: 236 FLWELFSLGSSP 247
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 14/174 (8%)
Query: 75 VSVVSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH-GRKGVQGAQPGPVL-- 130
+ V+S L H N+V LLG C G ++ E+ G L + L R ++ P +
Sbjct: 93 LKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIME 152
Query: 131 ------DWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN 184
D + + A+G+ +L K + IHRD+ + N+LL KI DF L+
Sbjct: 153 DDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLAR 209
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
+ + + + APE T +SDV+S+G+ L EL + G P
Sbjct: 210 DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L RK AQ +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ----FTVIQL 120
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 121 VGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 223
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 224 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
Query: 314 P 314
P
Sbjct: 282 P 282
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 75 VSVVSRLKHENLVELL-GYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWM 133
V ++ +H N+VE+ Y V L VL EF G+L DI+ + L+
Sbjct: 93 VVIMRDYQHFNVVEMYKSYLVGEELWVLM-EFLQGGALTDIVSQVR----------LNEE 141
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ-APDMAAR 192
+ + L YLH + +IHRDI+S ++LL D + K++DF Q + D+ R
Sbjct: 142 QIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR 198
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
++GT + APE + D++S G++++E++ G P
Sbjct: 199 ---KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L RK AQ +
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ----FTVIQL 137
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 138 VGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 240
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 241 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298
Query: 314 P 314
P
Sbjct: 299 P 299
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Query: 75 VSVVSRLKHENLVELL-GYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWM 133
+ +++ H N+V+LL + E NL +L EF G++ ++ ++ +P +
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWIL-IEFCAGGAVDAVM-----LELERP------L 132
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
T +I V + L+ L+ IIHRD+++ N+L D K+ADF +S + R
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR 192
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQ-----KSDVYSFGVVLLEL 231
S +GT + APE M K+DV+S G+ L+E+
Sbjct: 193 DS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Query: 75 VSVVSRLKHENLVELL-GYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWM 133
+ +++ H N+V+LL + E NL +L EF G++ ++ ++ +P +
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWIL-IEFCAGGAVDAVM-----LELERP------L 132
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
T +I V + L+ L+ IIHRD+++ N+L D K+ADF +S + R
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRR 192
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQ-----KSDVYSFGVVLLEL 231
S +GT + APE M K+DV+S G+ L+E+
Sbjct: 193 DS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L G V+ +
Sbjct: 82 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-----RFTVIQLVGM 136
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+R G++YL + S +HRD+ + N+L+ + K++DF +S D ++
Sbjct: 137 LR---GIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 190
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
TR + APE + T SDV+S+G+V+ E+++ G +P
Sbjct: 191 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 77 VVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
V+ L HE LV+L G C + + E+ G L + L R+ Q +L+
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLE----- 109
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHST 196
+ D +EYL K +HRD+ + N L+ + K++DF LS D S+
Sbjct: 110 -MCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD--DEYTSS 163
Query: 197 RVLGT---FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVD 239
R G+ + PE M + + KSD+++FGV++ E+ + G+ P +
Sbjct: 164 R--GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI F L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L G V+ +
Sbjct: 67 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-----RFTVIQLVGM 121
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+R G++YL + S +HRD+ + N+L+ + K++DF +S D ++
Sbjct: 122 LR---GIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
TR + APE + T SDV+S+G+V+ E+++ G +P
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L G V+ +
Sbjct: 61 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-----RFTVIQLVGM 115
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
+R G++YL + S +HRD+ + N+L+ + K++DF +S D ++
Sbjct: 116 LR---GIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 169
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKP 237
TR + APE + T SDV+S+G+V+ E+++ G +P
Sbjct: 170 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 100/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L RK AQ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ----FTVIQL 149
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF L+ D ++
Sbjct: 150 VGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 252
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 253 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 314 P 314
P
Sbjct: 311 P 311
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 18/124 (14%)
Query: 127 GPVLDWMT-RVRIAVDAAR--------GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI 177
G + D++ + R+ D R +EY H + I+HRD++ N+LL ++ KI
Sbjct: 93 GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKI 149
Query: 178 ADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQ--KSDVYSFGVVLLELLTGR 235
ADF LSN D S G+ Y APE + G+L + DV+S G+VL +L GR
Sbjct: 150 ADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGR 205
Query: 236 KPVD 239
P D
Sbjct: 206 LPFD 209
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI D L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 99/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E+ GSL L RK AQ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RK--HDAQ----FTVIQL 149
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF L D ++
Sbjct: 150 VGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 252
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 253 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 314 P 314
P
Sbjct: 311 P 311
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+++ L + ++V G+ + + + E SL ++ RK V P +
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE----PEARYFM 148
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R I +G++YLH +IHRD++ N+ L +D KI DF L+ + R
Sbjct: 149 RQTI-----QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 200
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ + GT Y APE + + D++S G +L LL G+ P +
Sbjct: 201 T--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+++ L + ++V G+ + + + E SL ++ RK V P +
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE----PEARYFM 148
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R I +G++YLH +IHRD++ N+ L +D KI DF L+ + R
Sbjct: 149 RQTI-----QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-- 198
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y APE + + D++S G +L LL G+ P +
Sbjct: 199 KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E GSL L RK AQ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RK--HDAQ----FTVIQL 149
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 150 VGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 252
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 253 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 314 P 314
P
Sbjct: 311 P 311
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E GSL L RK AQ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RK--HDAQ----FTVIQL 149
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 150 VGMLRGIASGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 252
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 253 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 314 P 314
P
Sbjct: 311 P 311
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGRK--PVDHTMPRGQQSLVTWATPRLSE 259
Y APE + + T+ D++S G +L E+L+ R P H + + L +P S+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP--SQ 249
Query: 260 DKVKQCVDPKLKG 272
+ + ++ K +
Sbjct: 250 EDLNXIINLKARN 262
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+++ L + ++V G+ + + + E SL ++ RK V P +
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE----PEARYFM 148
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R I +G++YLH +IHRD++ N+ L +D KI DF L+ + R
Sbjct: 149 RQTI-----QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-- 198
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y APE + + D++S G +L LL G+ P +
Sbjct: 199 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPV 129
K+ + + +H ++++L + E+ + G L D + HGR
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR----------- 107
Query: 130 LDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDM 189
++ M R+ ++Y H + ++HRD++ NVLL AKIADF LSN D
Sbjct: 108 VEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164
Query: 190 AARLHSTRVLGTFGYHAPEYAMTGQLTQ--KSDVYSFGVVLLELLTGRKPVD 239
S G+ Y APE ++G+L + D++S GV+L LL G P D
Sbjct: 165 EFLRDSC---GSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI D L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
RGL+Y+H IIHRD++ SN+ + ED + KI D L+ D T + T
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD-----EMTGYVATRW 187
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE + Q D++S G ++ ELLTGR
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 133 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDIL--HGRKGVQGAQPGPV 129
K+ + + +H ++++L + E+ + G L D + HGR
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR----------- 107
Query: 130 LDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDM 189
++ M R+ ++Y H + ++HRD++ NVLL AKIADF LSN D
Sbjct: 108 VEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164
Query: 190 AARLHSTRVLGTFGYHAPEYAMTGQLTQ--KSDVYSFGVVLLELLTGRKPVD 239
S G+ Y APE ++G+L + D++S GV+L LL G P D
Sbjct: 165 EFLRTSC---GSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+++ L + ++V G+ + + + E SL ++ RK V P +
Sbjct: 77 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE----PEARYFM 132
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
R I +G++YLH +IHRD++ N+ L +D KI DF L+ + R
Sbjct: 133 RQTI-----QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-- 182
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
+ GT Y APE + + D++S G +L LL G+ P +
Sbjct: 183 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGRK--PVDHTMPRGQQSLVTWATPRLSE 259
Y APE + + T+ D++S G +L E+L+ R P H + + L +P S+
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP--SQ 249
Query: 260 DKVKQCVDPKLKG 272
+ + ++ K +
Sbjct: 250 EDLNXIINLKARN 262
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 141 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 132 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 143 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 29/171 (16%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + +L+H N ++ G + + L E+ +GS D+L K +P +
Sbjct: 105 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK-----KP------LQ 152
Query: 135 RVRIAV---DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF-NLSNQAPDMA 190
V IA A +GL YLH ++IHRD+++ N+LL E K+ DF + S AP
Sbjct: 153 EVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 206
Query: 191 ARLHSTRVLGTFGYHAPEYAMT---GQLTQKSDVYSFGVVLLELLTGRKPV 238
+ +GT + APE + GQ K DV+S G+ +EL + P+
Sbjct: 207 ----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 97/236 (41%), Gaps = 26/236 (11%)
Query: 13 HAPSPGYFVRLDKGPEDDLYLKKRV----KMRRWLCCTCQVEESYPSHENERLKSPKNYP 68
HA +PG FV+ D Y +RV + C ++ + + + K
Sbjct: 10 HA-TPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT 68
Query: 69 DDEKQL--VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQP 126
D E L V ++ +L H N+ +L + + L E T G L D + RK
Sbjct: 69 DKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 128
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL---FEDFKAKIADFNLS 183
RI G+ Y H + I+HRD++ N+LL +D +I DF LS
Sbjct: 129 A---------RIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Query: 184 NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
A +GT Y APE + G +K DV+S GV+L LL+G P +
Sbjct: 177 TH---FEASKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 17/130 (13%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
+GL Y+H IIHRD++ N+ + ED + KI DF L+ QA TR
Sbjct: 139 KGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----W 190
Query: 204 YHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR---KPVDHTMPRGQQSLVTWATP---- 255
Y APE + + TQ D++S G ++ E++TG+ K DH + VT P
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250
Query: 256 -RLSEDKVKQ 264
RL D+ K
Sbjct: 251 QRLQSDEAKN 260
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 75 VSVVSRLKHENLVELL-GYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWM 133
+ +++ H N+V+LL + E NL +L EF G++ ++ ++ +P +
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWIL-IEFCAGGAVDAVM-----LELERP------L 132
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
T +I V + L+ L+ IIHRD+++ N+L D K+ADF +S + R
Sbjct: 133 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR- 191
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQ-----KSDVYSFGVVLLEL 231
+GT + APE M K+DV+S G+ L+E+
Sbjct: 192 -RDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD T + T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 39/245 (15%)
Query: 14 APSPGYFVRLDKGPEDDLYLKKRVKMRRWLCCTCQVEESYPSHENERLKSPKN------- 66
A +PG +VR +G + Y K R K+ + + H + +K K
Sbjct: 20 AINPGMYVRKKEGKIGESYFKVR-KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGR 78
Query: 67 YPDDEKQL----------VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH 116
Y DD K + +S++ L H N+++L + L EF G L + +
Sbjct: 79 YSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII 138
Query: 117 GRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFED---F 173
R ++ + G+ YLH + +I+HRDI+ N+LL
Sbjct: 139 NRHKFDECDAANIMKQILS---------GICYLH---KHNIVHRDIKPENILLENKNSLL 186
Query: 174 KAKIADFNLSNQ-APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELL 232
KI DF LS+ + D R LGT Y APE + + +K DV+S GV++ LL
Sbjct: 187 NIKIVDFGLSSFFSKDYKLRDR----LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILL 241
Query: 233 TGRKP 237
G P
Sbjct: 242 CGYPP 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 30/170 (17%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V + +L+H N ++ G + + L E+ +GS D+L K +P +
Sbjct: 66 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK-----KP------LQ 113
Query: 135 RVRIAV---DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF-NLSNQAPDMA 190
V IA A +GL YLH ++IHRD+++ N+LL E K+ DF + S AP
Sbjct: 114 EVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 167
Query: 191 ARLHSTRVLGTFGYHAPEYAMT---GQLTQKSDVYSFGVVLLELLTGRKP 237
+ +GT + APE + GQ K DV+S G+ +E L RKP
Sbjct: 168 ----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKP 212
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 29/241 (12%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
S++ + H N++ L G + ++ E GSL L RK AQ +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RK--HDAQ----FTVIQL 120
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V + A G++YL + +HRD+ + N+L+ + K++DF LS D ++
Sbjct: 121 VGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 196 TRVLGT-FGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMPRGQQSLVTWA 253
TR + +PE + T SDV+S+G+VL E+++ G +P W
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------W- 223
Query: 254 TPRLSEDKVKQCVDPKLKGEYXXXXXXXXXXXXXXCVQYEAEFRPNMSIVVKALQPLLKS 313
+S V + VD + C Q + RP +V L L+++
Sbjct: 224 --EMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
Query: 314 P 314
P
Sbjct: 282 P 282
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 75 VSVVSRLKHENLVELL-GYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWM 133
+ +++ H N+V+LL + E NL +L EF G++ ++ ++ +P +
Sbjct: 58 IDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVM-----LELERP------L 105
Query: 134 TRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
T +I V + L+ L+ IIHRD+++ N+L D K+ADF +S + +
Sbjct: 106 TESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQR 165
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQ-----KSDVYSFGVVLLEL 231
+ +GT + APE M K+DV+S G+ L+E+
Sbjct: 166 RDS-FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 111/267 (41%), Gaps = 42/267 (15%)
Query: 56 HENERL-----KSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGS 110
HE E L K+ +NY + + S++S+L H++LV G CV G+ +L EF GS
Sbjct: 39 HETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGS 98
Query: 111 LHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF 170
L L K ++ + ++ +A A + +L E ++IH ++ + N+LL
Sbjct: 99 LDTYLKKNKN--------CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLI 147
Query: 171 EDFKAKIAD---FNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTG--QLTQKSDVYSFG 225
+ K + LS+ P ++ + +L P + L +D +SFG
Sbjct: 148 REEDRKTGNPPFIKLSD--PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFG 205
Query: 226 VVLLELLT-GRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXX 284
L E+ + G KP+ +L + + ED+ Q PK
Sbjct: 206 TTLWEICSGGDKPL--------SALDSQRKLQFYEDR-HQLPAPK---------AAELAN 247
Query: 285 XXXXCVQYEAEFRPNMSIVVKALQPLL 311
C+ YE + RP+ +++ L L
Sbjct: 248 LINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
++V+ ++KHEN+V L N L + + G L D + KG + D T
Sbjct: 71 IAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRI-VEKGFYTEK-----DAST 124
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
+R +DA + YLH + I+HRD++ N+L + E+ K I+DF LS +
Sbjct: 125 LIRQVLDA---VYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKG 176
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ ST GT GY APE ++ D +S GV+ LL G P
Sbjct: 177 DVMST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 30/179 (16%)
Query: 71 EKQLVSVVSRLKHENLVELLGYCV----EGNLRVLAYEFATMGSLHDILHGRKGVQGAQP 126
E +L + V L+HEN++ + + L + MGSL+D L
Sbjct: 50 ETELYNTV-MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL--------- 99
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKV-----QPSIIHRDIRSSNVLLFEDFKAKIADFN 181
LD ++ +RI + A GL +LH ++ +P+I HRD++S N+L+ ++ + IAD
Sbjct: 100 -TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 158
Query: 182 LS---NQAPDMAARLHSTRVLGTFGYHAPEYA-MTGQLT-----QKSDVYSFGVVLLEL 231
L+ +Q+ + ++ RV GT Y APE T Q+ ++ D+++FG+VL E+
Sbjct: 159 LAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 30/179 (16%)
Query: 71 EKQLVSVVSRLKHENLVELLGYCV----EGNLRVLAYEFATMGSLHDILHGRKGVQGAQP 126
E +L + V L+HEN++ + + L + MGSL+D L
Sbjct: 50 ETELYNTV-MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL--------- 99
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKV-----QPSIIHRDIRSSNVLLFEDFKAKIADFN 181
LD ++ +RI + A GL +LH ++ +P+I HRD++S N+L+ ++ + IAD
Sbjct: 100 -TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 158
Query: 182 LS---NQAPDMAARLHSTRVLGTFGYHAPEYA-MTGQLT-----QKSDVYSFGVVLLEL 231
L+ +Q+ + ++ RV GT Y APE T Q+ ++ D+++FG+VL E+
Sbjct: 159 LAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 30/179 (16%)
Query: 71 EKQLVSVVSRLKHENLVELLGYCV----EGNLRVLAYEFATMGSLHDILHGRKGVQGAQP 126
E +L + V L+HEN++ + + L + MGSL+D L
Sbjct: 79 ETELYNTV-MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL--------- 128
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKV-----QPSIIHRDIRSSNVLLFEDFKAKIADFN 181
LD ++ +RI + A GL +LH ++ +P+I HRD++S N+L+ ++ + IAD
Sbjct: 129 -TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 187
Query: 182 LS---NQAPDMAARLHSTRVLGTFGYHAPEYA-MTGQLT-----QKSDVYSFGVVLLEL 231
L+ +Q+ + ++ RV GT Y APE T Q+ ++ D+++FG+VL E+
Sbjct: 188 LAVMHSQSTNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 27/138 (19%)
Query: 109 GSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKV-----QPSIIHRDIR 163
GSL+D L Q +P L R+AV AA GL +LH ++ +P+I HRD +
Sbjct: 91 GSLYDFLQR----QTLEPHLAL------RLAVSAACGLAHLHVEIFGTQGKPAIAHRDFK 140
Query: 164 SSNVLLFEDFKAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLT---- 216
S NVL+ + + IAD L+ +Q D ++ RV GT Y APE + Q+
Sbjct: 141 SRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAPE-VLDEQIRTDCF 198
Query: 217 ---QKSDVYSFGVVLLEL 231
+ +D+++FG+VL E+
Sbjct: 199 ESYKWTDIWAFGLVLWEI 216
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
GLE+LH++ +II+RD++ NVLL +D +I+D L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGTPGF 355
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
APE + + D ++ GV L E++ R P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
GLE+LH++ +II+RD++ NVLL +D +I+D L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGTPGF 355
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
APE + + D ++ GV L E++ R P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
GLE+LH++ +II+RD++ NVLL +D +I+D L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGTPGF 355
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
APE + + D ++ GV L E++ R P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAAR 192
+ + ARG+E+L + IHRD+ + N+LL E+ KI DF L+ + PD R
Sbjct: 202 ISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY-VR 257
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
TR+ + APE + KSDV+S+GV+L E+ +
Sbjct: 258 KGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
GLE+LH++ +II+RD++ NVLL +D +I+D L+ + A + + GT G+
Sbjct: 301 GLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGTPGF 355
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
APE + + D ++ GV L E++ R P
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 33/198 (16%)
Query: 59 ERLKSPKNYPDDEKQL--VSVVSRLKHENLVELLGYCVEGNL---------RVLAY---E 104
+R++ P EK + V +++L+H +V +E N +V Y +
Sbjct: 36 KRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQ 95
Query: 105 FATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRS 164
+L D ++GR ++ + L I + A +E+LH K ++HRD++
Sbjct: 96 LCRKENLKDWMNGRCTIEERERSVCL------HIFLQIAEAVEFLHSK---GLMHRDLKP 146
Query: 165 SNVLLFEDFKAKIADFNLSNQAPD----------MAARLHSTRVLGTFGYHAPEYAMTGQ 214
SN+ D K+ DF L M A T +GT Y +PE
Sbjct: 147 SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS 206
Query: 215 LTQKSDVYSFGVVLLELL 232
+ K D++S G++L ELL
Sbjct: 207 YSHKVDIFSLGLILFELL 224
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 62 KSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGV 121
KSP + ++V+ ++KHEN+V L L + + G L D + R GV
Sbjct: 44 KSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER-GV 102
Query: 122 QGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIA 178
+ ++ + +V AV +YLHE I+HRD++ N+L E+ K I
Sbjct: 103 YTEKDASLV--IQQVLSAV------KYLHEN---GIVHRDLKPENLLYLTPEENSKIMIT 151
Query: 179 DFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
DF LS M + GT GY APE ++ D +S GV+ LL G P
Sbjct: 152 DFGLSK----MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 105 FATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRS 164
F G LH L + G P L T VR VD A G+EYL + + IHRD+ +
Sbjct: 112 FMKHGDLHAFLLASR--IGENPFN-LPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAA 165
Query: 165 SNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSF 224
N +L ED +ADF LS + + A E T SDV++F
Sbjct: 166 RNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAF 225
Query: 225 GVVLLELLT-GRKP 237
GV + E++T G+ P
Sbjct: 226 GVTMWEIMTRGQTP 239
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V A + + GL +LH++ II+RD++ NV+L + KIADF + + M + +
Sbjct: 123 VFYAAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEH--MMDGVTT 177
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
GT Y APE + D +++GV+L E+L G+ P D
Sbjct: 178 REFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 34/169 (20%)
Query: 81 LKHENLVELLGYCVE--GNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI 138
H N++ +LG C L + GSL+++LH V+D V+
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF-------VVDQSQAVKF 116
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI--ADFNLSNQAPDMAARLHST 196
A+D ARG+ +LH ++P I + S +V++ ED A+I AD S Q+P R+
Sbjct: 117 ALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP---GRM--- 169
Query: 197 RVLGTFGYHAPEYAMTGQLTQK--------SDVYSFGVVLLELLTGRKP 237
+AP + L +K +D++SF V+L EL+T P
Sbjct: 170 --------YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 35/129 (27%)
Query: 131 DWMTRVRIAVDAARGLEYLHEKV------QPSIIHRDIRSSNVLLFEDFKAKIADFNLSN 184
DW++ R+A RGL YLH ++ +P+I HRD+ S NVL+ D I+DF LS
Sbjct: 109 DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS- 167
Query: 185 QAPDMAARLHSTRV-------------LGTFGYHAPEYAMTGQLT--------QKSDVYS 223
RL R+ +GT Y APE + G + ++ D+Y+
Sbjct: 168 ------MRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYA 220
Query: 224 FGVVLLELL 232
G++ E+
Sbjct: 221 LGLIYWEIF 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD + T
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTF 202
RGL+Y+H +++HRD++ SN+LL KI DF L+ A PD + T
Sbjct: 140 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 203 GYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
Y APE + + T+ D++S G +L E+L+ R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 10/163 (6%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ +L H N+++ +E N + E A G L ++ K + P + W
Sbjct: 83 IDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-W-- 139
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ V LE++H + ++HRDI+ +NV + K+ D L H
Sbjct: 140 --KYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH 194
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
S ++GT Y +PE KSD++S G +L E+ + P
Sbjct: 195 S--LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 11/163 (6%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ R +HEN++ + L + + + L+ Q + ++
Sbjct: 92 IQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLY 151
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARL 193
++ RGL+Y+H +++HRD++ SN+L+ KI DF L+ A P+
Sbjct: 152 QI------LRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTG 202
Query: 194 HSTRVLGTFGYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGR 235
T + T Y APE + + T+ D++S G +L E+L+ R
Sbjct: 203 FLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 27/125 (21%)
Query: 131 DWMTR------------VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIA 178
DWM R + I + A +E+LH K ++HRD++ SN+ D K+
Sbjct: 150 DWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 206
Query: 179 DFNLSNQ-----------APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVV 227
DF L P A H +V GT Y +PE + K D++S G++
Sbjct: 207 DFGLVTAMDQDEEEQTVLTPMPAYATHXGQV-GTKLYMSPEQIHGNNYSHKVDIFSLGLI 265
Query: 228 LLELL 232
L ELL
Sbjct: 266 LFELL 270
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 62 KSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEF--ATMGSLHDILHGRK 119
K + P + +S++ LKH N+V+L VL +E + L D+ G
Sbjct: 38 KEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG- 96
Query: 120 GVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIAD 179
L+ +T + G+ Y H++ ++HRD++ N+L+ + + KIAD
Sbjct: 97 ----------LESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIAD 143
Query: 180 FNLSNQAPDMAARLHSTRVLGTFGYHAPEYAM-TGQLTQKSDVYSFGVVLLELLTG 234
F L+ +A + R ++ V+ T Y AP+ M + + + D++S G + E++ G
Sbjct: 144 FGLA-RAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 62 KSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEF--ATMGSLHDILHGRK 119
K + P + +S++ LKH N+V+L VL +E + L D+ G
Sbjct: 38 KEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG- 96
Query: 120 GVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIAD 179
L+ +T + G+ Y H++ ++HRD++ N+L+ + + KIAD
Sbjct: 97 ----------LESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIAD 143
Query: 180 FNLSNQAPDMAARLHSTRVLGTFGYHAPEYAM-TGQLTQKSDVYSFGVVLLELLTG 234
F L+ +A + R ++ V+ T Y AP+ M + + + D++S G + E++ G
Sbjct: 144 FGLA-RAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH----GRKGVQGAQPGPVLD 131
+++ +KH +V+L+ Y F T G L+ IL G +Q + G ++
Sbjct: 73 NILEEVKHPFIVDLI------------YAFQTGGKLYLILEYLSGGELFMQLEREGIFME 120
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+A + + L +LH+K II+RD++ N++L K+ DF L ++
Sbjct: 121 DTACFYLA-EISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT 176
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
H+ GT Y APE M + D +S G ++ ++LTG P
Sbjct: 177 VTHT--FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 75 VSVVSRLKHENLVELLG-YCVEGNLRVLAYEFATMGSLHDI-LHGRKGVQGAQPGPVLDW 132
+ +++ H +V+LLG Y +G L ++ EF G++ I L +G+ Q V
Sbjct: 59 IEILATCDHPYIVKLLGAYYHDGKLWIM-IEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 117
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M L +LH K IIHRD+++ NVL+ + ++ADF +S A ++
Sbjct: 118 MLE---------ALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTL 163
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-----KSDVYSFGVVLLEL 231
+GT + APE M + K+D++S G+ L+E+
Sbjct: 164 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 75 VSVVSRLKHENLVELLG-YCVEGNLRVLAYEFATMGSLHDI-LHGRKGVQGAQPGPVLDW 132
+ +++ H +V+LLG Y +G L ++ EF G++ I L +G+ Q V
Sbjct: 67 IEILATCDHPYIVKLLGAYYHDGKLWIM-IEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 125
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
M L +LH K IIHRD+++ NVL+ + ++ADF +S A ++
Sbjct: 126 MLE---------ALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTL 171
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQ-----KSDVYSFGVVLLEL 231
+GT + APE M + K+D++S G+ L+E+
Sbjct: 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 62 KSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEF--ATMGSLHDILHGRK 119
K + P + +S++ LKH N+V+L VL +E + L D+ G
Sbjct: 38 KEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG- 96
Query: 120 GVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIAD 179
L+ +T + G+ Y H++ ++HRD++ N+L+ + + KIAD
Sbjct: 97 ----------LESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIAD 143
Query: 180 FNLSNQAPDMAARLHSTRVLGTFGYHAPEYAM-TGQLTQKSDVYSFGVVLLELLTG 234
F L+ +A + R ++ ++ T Y AP+ M + + + D++S G + E++ G
Sbjct: 144 FGLA-RAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
++V+ ++KH N+V L G L + + G L D + KG +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDAS------ 119
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
R+ ++YLH+ I+HRD++ N+L + ED K I+DF LS + D +
Sbjct: 120 --RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGS 173
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
L + GT GY APE ++ D +S GV+ LL G P
Sbjct: 174 VLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
++V+ ++KH N+V L G L + + G L D + KG +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDAS------ 119
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
R+ ++YLH+ I+HRD++ N+L + ED K I+DF LS + D +
Sbjct: 120 --RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGS 173
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
L + GT GY APE ++ D +S GV+ LL G P
Sbjct: 174 VLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 42/267 (15%)
Query: 56 HENERL-----KSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGS 110
HE E L K+ +NY + + S++S+L H++LV G C G+ +L EF GS
Sbjct: 39 HETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGS 98
Query: 111 LHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF 170
L L K ++ + ++ +A A + +L E ++IH ++ + N+LL
Sbjct: 99 LDTYLKKNKN--------CINILWKLEVAKQLAWAMHFLEEN---TLIHGNVCAKNILLI 147
Query: 171 EDFKAKIAD---FNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTG--QLTQKSDVYSFG 225
+ K + LS+ P ++ + +L P + L +D +SFG
Sbjct: 148 REEDRKTGNPPFIKLSD--PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFG 205
Query: 226 VVLLELLT-GRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYXXXXXXXXXX 284
L E+ + G KP+ +L + + ED+ Q PK
Sbjct: 206 TTLWEICSGGDKPL--------SALDSQRKLQFYEDR-HQLPAPK---------AAELAN 247
Query: 285 XXXXCVQYEAEFRPNMSIVVKALQPLL 311
C+ YE + RP+ +++ L L
Sbjct: 248 LINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
++V+ ++KH N+V L G L + + G L D + KG +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDAS------ 119
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
R+ ++YLH+ I+HRD++ N+L + ED K I+DF LS + D +
Sbjct: 120 --RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGS 173
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
L + GT GY APE ++ D +S GV+ LL G P
Sbjct: 174 VLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
++V+ ++KH N+V L G L + + G L D + KG +
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDAS------ 119
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
R+ ++YLH+ I+HRD++ N+L + ED K I+DF LS + D +
Sbjct: 120 --RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGS 173
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
L + GT GY APE ++ D +S GV+ LL G P
Sbjct: 174 VLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 31/209 (14%)
Query: 75 VSVVSRLKHENLVEL--------------LGYCVEGNLRVLAYEFATMGSLHDILHGRKG 120
+ ++ RL H+N+V++ +G E N + E+ L ++L
Sbjct: 59 IKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL----- 112
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL-FEDFKAKIAD 179
+ GP+L+ R+ RGL+Y+H +++HRD++ +N+ + ED KI D
Sbjct: 113 ----EQGPLLEEHARL-FMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGD 164
Query: 180 FNLSN-QAPDMAARLHSTRVLGTFGYHAPEYAMT-GQLTQKSDVYSFGVVLLELLTGRKP 237
F L+ P + + H + L T Y +P ++ T+ D+++ G + E+LTG+
Sbjct: 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTL 224
Query: 238 VDHTMPRGQQSLVTWATPRLSEDKVKQCV 266
Q L+ + P + E+ ++ +
Sbjct: 225 FAGAHELEQMQLILESIPVVHEEDRQELL 253
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA--RLHSTRVLGT 201
RGL+Y+H +IHRD++ SN+L+ E+ + KI DF ++ A + T + T
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 202 FGYHAPEYAMT-GQLTQKSDVYSFGVVLLELLTGRK 236
Y APE ++ + TQ D++S G + E+L R+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V A + GLE LH + I++RD++ N+LL + +I+D L+ P+ +
Sbjct: 289 VFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIK 343
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDH 240
RV GT GY APE + T D ++ G +L E++ G+ P
Sbjct: 344 GRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 22/193 (11%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K + + L+H+++ +L N + E+ G L D + + + +
Sbjct: 56 KTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEE------ 109
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
TRV + + Y+H + HRD++ N+L E K K+ DF L + P
Sbjct: 110 --TRV-VFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNK 162
Query: 192 RLHSTRVLGTFGYHAPEYAM-TGQLTQKSDVYSFGVVLLELLTGRKPVD--------HTM 242
H G+ Y APE L ++DV+S G++L L+ G P D +
Sbjct: 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKI 222
Query: 243 PRGQQSLVTWATP 255
RG+ + W +P
Sbjct: 223 MRGKYDVPKWLSP 235
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V A + A GL +L K II+RD++ NV+L + KIADF + + ++ + +
Sbjct: 445 VFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTT 499
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
GT Y APE + D ++FGV+L E+L G+ P +
Sbjct: 500 KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 103/244 (42%), Gaps = 42/244 (17%)
Query: 11 GAHAPSPGYFVRLDKGPEDDLYLKKRVK------MRRWLCC---TCQVEESYPSHENERL 61
G +PG F+ KG ++Y +RVK L C VE + +
Sbjct: 18 GDLQATPGMFITSKKGHLSEMY--QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV 75
Query: 62 KSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHD-ILHGRKG 120
+ N E+ V+V+ L H N+++L + + L E G L D I+H K
Sbjct: 76 STSSNSKLLEE--VAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK- 132
Query: 121 VQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKI 177
+ + I G+ YLH + +I+HRD++ N+LL +D KI
Sbjct: 133 ---------FNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKI 180
Query: 178 ADFNLS----NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
DF LS NQ M RL GT Y APE + + +K DV+S GV+L LL
Sbjct: 181 VDFGLSAVFENQKK-MKERL------GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLA 232
Query: 234 GRKP 237
G P
Sbjct: 233 GYPP 236
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 22/166 (13%)
Query: 76 SVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH----GRKGVQGAQPGPVLD 131
+++ +KH +V+L+ Y F T G L+ IL G +Q + G ++
Sbjct: 73 NILEEVKHPFIVDLI------------YAFQTGGKLYLILEYLSGGELFMQLEREGIFME 120
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+A + + L +LH+K II+RD++ N++L K+ DF L ++
Sbjct: 121 DTACFYLA-EISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT 176
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
H GT Y APE M + D +S G ++ ++LTG P
Sbjct: 177 VTHX--FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 29/243 (11%)
Query: 25 KGPEDDLYLKKRVKMRRWLCCTCQVEESYPSHE-------NERLKSPKNYPDDEKQLVSV 77
+G DDL++ KR VEE E +R + P + E + V
Sbjct: 17 QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAE---IEV 73
Query: 78 VSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHD-ILHGRKGVQGAQPGPVLDWMTRV 136
+ L H N++++ + + + E G L + I+ + + G V + M ++
Sbjct: 74 LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 137 RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFK----AKIADFNLSNQAPDMAAR 192
A L Y H + ++H+D++ N+L F+D KI DF L A +
Sbjct: 134 MNA------LAYFHSQ---HVVHKDLKPENIL-FQDTSPHSPIKIIDFGL---AELFKSD 180
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTW 252
HST GT Y APE +T K D++S GVV+ LLTG P T Q T+
Sbjct: 181 EHSTNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY 239
Query: 253 ATP 255
P
Sbjct: 240 KEP 242
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
+EY H + I+HRD++ N+LL E KIADF LSN D S G+ Y
Sbjct: 115 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 168
Query: 205 HAPEYAMTGQLTQ--KSDVYSFGVVLLELLTGRKPVD 239
APE ++G+L + DV+S GV+L +L R P D
Sbjct: 169 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V A + GLE LH + I++RD++ N+LL + +I+D L+ P+ +
Sbjct: 289 VFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIK 343
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDH 240
RV GT GY APE + T D ++ G +L E++ G+ P
Sbjct: 344 GRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
Query: 58 NERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
N + S +++ E++ + +L+H N+V L E + L ++ T G L + +
Sbjct: 39 NTKKLSARDFQKLERE-ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA 97
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-- 175
R+ A + + + Y H I+HR+++ N+LL K
Sbjct: 98 REFYSEADASHCIQQILE---------SIAYCHSN---GIVHRNLKPENLLLASKAKGAA 145
Query: 176 -KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
K+ADF L+ + D A H GT GY +PE ++ D+++ GV+L LL G
Sbjct: 146 VKLADFGLAIEVNDSEA-WHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
Query: 235 RKP 237
P
Sbjct: 203 YPP 205
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
+EY H + I+HRD++ N+LL E KIADF LSN D S G+ Y
Sbjct: 125 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 178
Query: 205 HAPEYAMTGQLTQ--KSDVYSFGVVLLELLTGRKPVD 239
APE ++G+L + DV+S GV+L +L R P D
Sbjct: 179 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
+EY H + I+HRD++ N+LL E KIADF LSN D S G+ Y
Sbjct: 124 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 177
Query: 205 HAPEYAMTGQLTQ--KSDVYSFGVVLLELLTGRKPVD 239
APE ++G+L + DV+S GV+L +L R P D
Sbjct: 178 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
+EY H + I+HRD++ N+LL E KIADF LSN D S G+ Y
Sbjct: 119 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 172
Query: 205 HAPEYAMTGQLTQ--KSDVYSFGVVLLELLTGRKPVD 239
APE ++G+L + DV+S GV+L +L R P D
Sbjct: 173 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 77 VVSRLKHENLVELLG-YCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
++ ++HEN++ LL + +LR + M + L G++ ++ +
Sbjct: 76 LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSE--------EK 127
Query: 136 VRIAV-DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
++ V +GL+Y+H ++HRD++ N+ + ED + KI DF L+ A
Sbjct: 128 IQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD-----AE 179
Query: 195 STRVLGTFGYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
T + T Y APE ++ Q D++S G ++ E+LTG+
Sbjct: 180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 77 VVSRLKHENLVELLG-YCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR 135
++ ++HEN++ LL + +LR + M + L G++ ++ +
Sbjct: 94 LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSE--------EK 145
Query: 136 VRIAV-DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
++ V +GL+Y+H ++HRD++ N+ + ED + KI DF L+ A
Sbjct: 146 IQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD-----AE 197
Query: 195 STRVLGTFGYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
T + T Y APE ++ Q D++S G ++ E+LTG+
Sbjct: 198 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS 195
V A + A GL +L K II+RD++ NV+L + KIADF + + ++ + +
Sbjct: 124 VFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE--NIWDGVTT 178
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
GT Y APE + D ++FGV+L E+L G+ P +
Sbjct: 179 KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
Query: 58 NERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
N + S +++ E++ + +L+H N+V L E + L ++ T G L + +
Sbjct: 40 NTKKLSARDFQKLERE-ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA 98
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-- 175
R+ A + + + Y H I+HR+++ N+LL K
Sbjct: 99 REFYSEADASHCIQQILE---------SIAYCHSN---GIVHRNLKPENLLLASKAKGAA 146
Query: 176 -KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
K+ADF L+ + D A H GT GY +PE ++ D+++ GV+L LL G
Sbjct: 147 VKLADFGLAIEVNDSEA-WHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
Query: 235 RKP 237
P
Sbjct: 204 YPP 206
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 13/191 (6%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQ 122
SP +D K+ S+ LKH ++VELL + + +EF L + V+
Sbjct: 65 SPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL-----CFEIVK 119
Query: 123 GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA---KIAD 179
A G V L Y H+ +IIHRD++ NVLL + K+ D
Sbjct: 120 RADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGD 176
Query: 180 FNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
F ++ Q + + + RV GT + APE + DV+ GV+L LL+G P
Sbjct: 177 FGVAIQLGE-SGLVAGGRV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234
Query: 240 HTMPRGQQSLV 250
T R + ++
Sbjct: 235 GTKERLFEGII 245
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI---------AVDAARGLEY 148
L L Y F T L ++ + A G + ++R R+ + LEY
Sbjct: 67 LTALKYAFQTHDRLCFVM------EYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + +++RDI+ N++L +D KI DF L + A + + GT Y APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPE 175
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + GVV+ E++ GR P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
Query: 58 NERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
N + S +++ E++ + +L+H N+V L E + L ++ T G L + +
Sbjct: 40 NTKKLSARDFQKLERE-ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA 98
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-- 175
R+ A + + + Y H I+HR+++ N+LL K
Sbjct: 99 REFYSEADASHCIQQILE---------SIAYCHSN---GIVHRNLKPENLLLASKAKGAA 146
Query: 176 -KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
K+ADF L+ + D A H GT GY +PE ++ D+++ GV+L LL G
Sbjct: 147 VKLADFGLAIEVNDSEA-WHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
Query: 235 RKP 237
P
Sbjct: 204 YPP 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG 127
P + +S++ L H N+V+LL N L +EF +M L D + + G P
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDA-SALTGI-PL 105
Query: 128 PVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAP 187
P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +A
Sbjct: 106 PLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAF 156
Query: 188 DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTMPR 244
+ R + V+ T Y APE + + + D++S G + E++T R P D + +
Sbjct: 157 GVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
Query: 245 GQQSLVTWATP 255
+ T TP
Sbjct: 216 LFRIFRTLGTP 226
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG 127
P + +S++ L H N+V+LL N L +EF +M L D + + G P
Sbjct: 48 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDA-SALTGI-PL 104
Query: 128 PVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAP 187
P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +A
Sbjct: 105 PLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAF 155
Query: 188 DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTMPR 244
+ R + V+ T Y APE + + + D++S G + E++T R P D + +
Sbjct: 156 GVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
Query: 245 GQQSLVTWATP 255
+ T TP
Sbjct: 215 LFRIFRTLGTP 225
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI-AVDAAR--------GLEY 148
L L Y F T L ++ + A G + ++R R+ + D AR L+Y
Sbjct: 213 LTALKYSFQTHDRLCFVM------EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 266
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + ++++RD++ N++L +D KI DF L + A + + GT Y APE
Sbjct: 267 LHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPE 322
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + GVV+ E++ GR P
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI---------AVDAARGLEY 148
L L Y F T L ++ + A G + ++R R+ + LEY
Sbjct: 67 LTALKYAFQTHDRLCFVM------EYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + +++RDI+ N++L +D KI DF L + A + + GT Y APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPE 175
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + GVV+ E++ GR P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA--RLHSTRVLGT 201
RGL+Y+H +IHRD++ SN+L+ E+ + KI DF ++ A + T + T
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 202 FGYHAPEYAMT-GQLTQKSDVYSFGVVLLELLTGRK 236
Y APE ++ + TQ D++S G + E+L R+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI---------AVDAARGLEY 148
L L Y F T L ++ + A G + ++R R+ + LEY
Sbjct: 70 LTALKYAFQTHDRLCFVM------EYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 123
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + +++RDI+ N++L +D KI DF L + A + + GT Y APE
Sbjct: 124 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPE 178
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + GVV+ E++ GR P
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI-AVDAAR--------GLEY 148
L L Y F T L ++ + A G + ++R R+ + D AR L+Y
Sbjct: 210 LTALKYSFQTHDRLCFVM------EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 263
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + ++++RD++ N++L +D KI DF L + A + + GT Y APE
Sbjct: 264 LHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPE 319
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + GVV+ E++ GR P
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 20/173 (11%)
Query: 71 EKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVL 130
E L+ + +H N+V L+ C E + + P P L
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTD---REIKVTLVFEHVDQDLRTYLDKAPPPGL 117
Query: 131 DWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA 190
T + RGL++LH I+HRD++ N+L+ K+ADF L
Sbjct: 118 PAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGL-------- 166
Query: 191 ARLHS-----TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
AR++S T V+ T Y APE + D++S G + E+ RKP+
Sbjct: 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 19/163 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ +L+HENLV LL C + L +EF L D+ G LD+
Sbjct: 75 IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---------LDYQV 125
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ--APDMAAR 192
+ G+ + H +IIHRDI+ N+L+ + K+ DF + AP
Sbjct: 126 VQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP---GE 179
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTG 234
++ V T Y APE + K+ DV++ G ++ E+ G
Sbjct: 180 VYDDEV-ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI---------AVDAARGLEY 148
L L Y F T L ++ + A G + ++R R+ + LEY
Sbjct: 72 LTALKYAFQTHDRLCFVM------EYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + +++RDI+ N++L +D KI DF L + A + GT Y APE
Sbjct: 126 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEYLAPE 180
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + GVV+ E++ GR P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI---------AVDAARGLEY 148
L L Y F T L ++ + A G + ++R R+ + LEY
Sbjct: 67 LTALKYAFQTHDRLCFVM------EYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + +++RDI+ N++L +D KI DF L + A + GT Y APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEYLAPE 175
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + GVV+ E++ GR P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI---------AVDAARGLEY 148
L L Y F T L ++ + A G + ++R R+ + LEY
Sbjct: 67 LTALKYAFQTHDRLCFVM------EYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + +++RDI+ N++L +D KI DF L + A + GT Y APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEYLAPE 175
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + GVV+ E++ GR P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI---------AVDAARGLEY 148
L L Y F T L ++ + A G + ++R R+ + LEY
Sbjct: 67 LTALKYAFQTHDRLCFVM------EYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + +++RDI+ N++L +D KI DF L + A + GT Y APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--FCGTPEYLAPE 175
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + GVV+ E++ GR P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
Query: 58 NERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
N + S +++ E++ + +L+H N+V L E + L ++ T G L + +
Sbjct: 63 NTKKLSARDFQKLERE-ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA 121
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-- 175
R+ A + + + Y H I+HR+++ N+LL K
Sbjct: 122 REFYSEADASHCIQQILE---------SIAYCHSN---GIVHRNLKPENLLLASKAKGAA 169
Query: 176 -KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
K+ADF L+ + D A H GT GY +PE ++ D+++ GV+L LL G
Sbjct: 170 VKLADFGLAIEVNDSEA-WHG--FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
Query: 235 RKP 237
P
Sbjct: 227 YPP 229
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 31/170 (18%)
Query: 81 LKHENLVELLGYCVEGNLR----VLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
++HEN++ + ++G L ++ GSL+D L LD + +
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS----------TTLDAKSML 137
Query: 137 RIAVDAARGLEYLHEKV-----QPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
++A + GL +LH ++ +P+I HRD++S N+L+ ++ IAD L+ +
Sbjct: 138 KLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN 197
Query: 192 RLH---STRVLGTFGYHAPEYAMTGQLTQK-------SDVYSFGVVLLEL 231
+ +TRV GT Y PE + L + +D+YSFG++L E+
Sbjct: 198 EVDIPPNTRV-GTKRYMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI-AVDAAR--------GLEY 148
L L Y F T L ++ + A G + ++R R+ + D AR L+Y
Sbjct: 72 LTALKYSFQTHDRLCFVM------EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + ++++RD++ N++L +D KI DF L + A + GT Y APE
Sbjct: 126 LHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEYLAPE 181
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+ D + GVV+ E++ GR P
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 34/169 (20%)
Query: 81 LKHENLVELLGYCVE--GNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI 138
H N++ +LG C L + GSL+++LH V+D V+
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNF-------VVDQSQAVKF 116
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKI--ADFNLSNQAPDMAARLHST 196
A+D ARG +LH ++P I + S +V + ED A+I AD S Q+P
Sbjct: 117 ALDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRX------ 169
Query: 197 RVLGTFGYHAPEYAMTGQLTQK--------SDVYSFGVVLLELLTGRKP 237
+AP + L +K +D +SF V+L EL+T P
Sbjct: 170 --------YAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVP 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI-AVDAAR--------GLEY 148
L L Y F T L ++ + A G + ++R R+ + D AR L+Y
Sbjct: 70 LTALKYSFQTHDRLCFVM------EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + ++++RD++ N++L +D KI DF L + A + GT Y APE
Sbjct: 124 LHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEYLAPE 179
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+ D + GVV+ E++ GR P
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 83 HENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDA 142
H N+++L L ++ G L D L + + + ++ + V A
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--- 139
Query: 143 ARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF 202
LH + +I+HRD++ N+LL +D K+ DF S Q D +L S V GT
Sbjct: 140 ------LH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRS--VCGTP 187
Query: 203 GYHAPEYAMTGQ------LTQKSDVYSFGVVLLELLTGRKPVDH 240
Y APE ++ D++S GV++ LL G P H
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRI-AVDAAR--------GLEY 148
L L Y F T L ++ + A G + ++R R+ + D AR L+Y
Sbjct: 71 LTALKYSFQTHDRLCFVM------EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPE 208
LH + ++++RD++ N++L +D KI DF L + A + GT Y APE
Sbjct: 125 LHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--FCGTPEYLAPE 180
Query: 209 YAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + GVV+ E++ GR P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V+V+ +L H N+++L + + L E G L D + R+ ++
Sbjct: 72 VAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK--- 128
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL---FEDFKAKIADFNLSNQAPDMAA 191
G YLH + +I+HRD++ N+LL D KI DF LS ++
Sbjct: 129 ------QVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGG 178
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
++ LGT Y APE + + +K DV+S GV+L LL G P
Sbjct: 179 KMKER--LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS-----TRV 198
RGL++LH ++HRD++ N+L+ + K+ADF L AR++S T V
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------ARIYSFQMALTSV 179
Query: 199 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+ T Y APE + D++S G + E+ RKP+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 71 EKQL----VSVVSRLKHENLVELLGYCVEGNLRVL--AYEFATMGSLHDILHGRKGVQGA 124
EKQ+ V+++ LKH N+V ++ L E+ G L ++ +G
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGT 102
Query: 125 QPGPVLDWMTRVRIAVDAARGLEYLHEKVQP--SIIHRDIRSSNVLLFEDFKAKIADFNL 182
+ LD +R+ L+ H + +++HRD++ +NV L K+ DF L
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 183 S---NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLEL 231
+ N D A +GT Y +PE +KSD++S G +L EL
Sbjct: 163 ARILNHDEDFAKEF-----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS-----TRV 198
RGL++LH ++HRD++ N+L+ + K+ADF L AR++S T V
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------ARIYSFQMALTSV 179
Query: 199 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+ T Y APE + D++S G + E+ RKP+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS-----TRV 198
RGL++LH ++HRD++ N+L+ + K+ADF L AR++S T V
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL--------ARIYSFQMALTSV 179
Query: 199 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
+ T Y APE + D++S G + E+ RKP+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
A + GLE++H + +++RD++ +N+LL E +I+D L A D + + V
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL---ACDFSKKKPHASV 351
Query: 199 LGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRKP 237
GT GY APE G S D +S G +L +LL G P
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
A + GLE++H + +++RD++ +N+LL E +I+D L A D + + V
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL---ACDFSKKKPHASV 351
Query: 199 LGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRKP 237
GT GY APE G S D +S G +L +LL G P
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
A + GLE++H + +++RD++ +N+LL E +I+D L A D + + V
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL---ACDFSKKKPHASV 351
Query: 199 LGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRKP 237
GT GY APE G S D +S G +L +LL G P
Sbjct: 352 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
A + GLE++H + +++RD++ +N+LL E +I+D L A D + + V
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL---ACDFSKKKPHASV 350
Query: 199 LGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRKP 237
GT GY APE G S D +S G +L +LL G P
Sbjct: 351 -GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 20/173 (11%)
Query: 71 EKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVL 130
E L+ + +H N+V L+ C E + + P P L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTD---REIKVTLVFEHVDQDLRTYLDKAPPPGL 109
Query: 131 DWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA 190
T + RGL++LH I+HRD++ N+L+ K+ADF L
Sbjct: 110 PAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGL-------- 158
Query: 191 ARLHSTR-----VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
AR++S + V+ T Y APE + D++S G + E+ RKP+
Sbjct: 159 ARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 20/173 (11%)
Query: 71 EKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVL 130
E L+ + +H N+V L+ C E + + P P L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTD---REIKVTLVFEHVDQDLRTYLDKAPPPGL 109
Query: 131 DWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA 190
T + RGL++LH I+HRD++ N+L+ K+ADF L
Sbjct: 110 PAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGL-------- 158
Query: 191 ARLHSTR-----VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
AR++S + V+ T Y APE + D++S G + E+ RKP+
Sbjct: 159 ARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 20/173 (11%)
Query: 71 EKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVL 130
E L+ + +H N+V L+ C E + + P P L
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTD---REIKVTLVFEHVDQDLRTYLDKAPPPGL 109
Query: 131 DWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA 190
T + RGL++LH I+HRD++ N+L+ K+ADF L
Sbjct: 110 PAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGL-------- 158
Query: 191 ARLHSTR-----VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPV 238
AR++S + V+ T Y APE + D++S G + E+ RKP+
Sbjct: 159 ARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAARLHS 195
+ A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD R
Sbjct: 199 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD 254
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 255 ARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAARLHS 195
+ A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD R
Sbjct: 204 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD 259
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 260 ARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAARLHS 195
+ A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD R
Sbjct: 206 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD 261
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 262 ARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN---QAPDMAARLHS 195
+ A+G+E+L + IHRD+ + N+LL E KI DF L+ + PD R
Sbjct: 197 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD 252
Query: 196 TRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLT 233
R+ + APE T +SDV+SFGV+L E+ +
Sbjct: 253 ARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 83 HENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDA 142
H N+++L L ++ G L D L + + + ++ + V A
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--- 126
Query: 143 ARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF 202
LH + +I+HRD++ N+LL +D K+ DF S Q D +L V GT
Sbjct: 127 ------LH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLR--EVCGTP 174
Query: 203 GYHAPEYAMTGQ------LTQKSDVYSFGVVLLELLTGRKPVDH 240
Y APE ++ D++S GV++ LL G P H
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 218
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S GV++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 16/191 (8%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG 127
P + +S++ L H N+V+LL N L +EF +M L + + G P
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDA-SALTGI-PL 105
Query: 128 PVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAP 187
P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +A
Sbjct: 106 PLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAF 156
Query: 188 DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTMPR 244
+ R + V+ T Y APE + + + D++S G + E++T R P D + +
Sbjct: 157 GVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
Query: 245 GQQSLVTWATP 255
+ T TP
Sbjct: 216 LFRIFRTLGTP 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 16/191 (8%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPG 127
P + +S++ L H N+V+LL N L +EF +M L + + G P
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDA-SALTGI-PL 103
Query: 128 PVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAP 187
P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +A
Sbjct: 104 PLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAF 154
Query: 188 DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTMPR 244
+ R + V+ T Y APE + + + D++S G + E++T R P D + +
Sbjct: 155 GVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
Query: 245 GQQSLVTWATP 255
+ T TP
Sbjct: 214 LFRIFRTLGTP 224
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 28/188 (14%)
Query: 58 NERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
N + S +++ E++ + LKH N+V L E L ++ T G L + +
Sbjct: 38 NTKKLSARDHQKLERE-ARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 96
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKV----QPSIIHRDIRSSNVLLFEDF 173
R+ A DA+ ++ + E V Q ++HRD++ N+LL
Sbjct: 97 REYYSEA----------------DASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKC 140
Query: 174 KA---KIADFNLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLL 229
K K+ADF L+ + D A GT GY +PE + D+++ GV+L
Sbjct: 141 KGAAVKLADFGLAIEVQGDQQAWF---GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILY 197
Query: 230 ELLTGRKP 237
LL G P
Sbjct: 198 ILLVGYPP 205
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 25/193 (12%)
Query: 55 SHENERLKSPKNYPDDEK------QLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFAT- 107
+HE LK + DDE + + ++ LKH+N+V L L +EF
Sbjct: 26 THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85
Query: 108 -MGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSN 166
+ D +G P V ++ ++ +GL + H + +++HRD++ N
Sbjct: 86 DLKKYFDSCNG-----DLDPEIVKSFLFQL------LKGLGFCHSR---NVLHRDLKPQN 131
Query: 167 VLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFG 225
+L+ + + K+ADF L+ +A + R +S V+ T Y P+ +L S D++S G
Sbjct: 132 LLINRNGELKLADFGLA-RAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSIDMWSAG 189
Query: 226 VVLLELLTGRKPV 238
+ EL +P+
Sbjct: 190 CIFAELANAARPL 202
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 28/167 (16%)
Query: 81 LKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAV 140
L+ N V+ + + + + E+ G+L+D++H Q W R+
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY----W----RLFR 123
Query: 141 DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNL--------------SNQA 186
L Y+H + IIHRD++ N+ + E KI DF L S
Sbjct: 124 QILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 187 PDMAARLHSTRVLGTFGYHAPEYA-MTGQLTQKSDVYSFGVVLLELL 232
P + L T +GT Y A E TG +K D+YS G++ E++
Sbjct: 181 PGSSDNL--TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 83 HENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDA 142
H N+++L L ++ G L D L + + + ++ + V A
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--- 139
Query: 143 ARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTF 202
LH + +I+HRD++ N+LL +D K+ DF S Q D +L V GT
Sbjct: 140 ------LH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLR--EVCGTP 187
Query: 203 GYHAPEYAMTGQ------LTQKSDVYSFGVVLLELLTGRKPVDH 240
Y APE ++ D++S GV++ LL G P H
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V+V+ +L H N+++L + + L E G L D + R+ ++
Sbjct: 55 VAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK--- 111
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLL---FEDFKAKIADFNLSNQAPDMAA 191
G YLH + +I+HRD++ N+LL D KI DF LS ++
Sbjct: 112 ------QVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGG 161
Query: 192 RLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
++ LGT Y APE + + +K DV+S GV+L LL G P
Sbjct: 162 KMKER--LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 23/127 (18%)
Query: 127 GPVLDWMTR--------VRIAVDAARGLEYLHEKV-----QPSIIHRDIRSSNVLLFEDF 173
G + D++ R +++A+ A GL +LH ++ +P+I HRD++S N+L+ ++
Sbjct: 112 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 171
Query: 174 KAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTG------QLTQKSDVYSF 224
IAD L+ + A D + RV GT Y APE + +++D+Y+
Sbjct: 172 TCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAM 230
Query: 225 GVVLLEL 231
G+V E+
Sbjct: 231 GLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 23/127 (18%)
Query: 127 GPVLDWMTR--------VRIAVDAARGLEYLHEKV-----QPSIIHRDIRSSNVLLFEDF 173
G + D++ R +++A+ A GL +LH ++ +P+I HRD++S N+L+ ++
Sbjct: 125 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 184
Query: 174 KAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTG------QLTQKSDVYSF 224
IAD L+ + A D + RV GT Y APE + +++D+Y+
Sbjct: 185 TCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIYAM 243
Query: 225 GVVLLEL 231
G+V E+
Sbjct: 244 GLVFWEI 250
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A + T + T Y
Sbjct: 136 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVTRYY 189
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S G ++ EL+ G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 23/129 (17%)
Query: 125 QPGPVLDWMTR--------VRIAVDAARGLEYLHEKV-----QPSIIHRDIRSSNVLLFE 171
+ G + D++ R +++A+ A GL +LH ++ +P+I HRD++S N+L+ +
Sbjct: 90 EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 149
Query: 172 DFKAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTG------QLTQKSDVY 222
+ IAD L+ + A D + RV GT Y APE + +++D+Y
Sbjct: 150 NGTCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIY 208
Query: 223 SFGVVLLEL 231
+ G+V E+
Sbjct: 209 AMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 23/129 (17%)
Query: 125 QPGPVLDWMTR--------VRIAVDAARGLEYLHEKV-----QPSIIHRDIRSSNVLLFE 171
+ G + D++ R +++A+ A GL +LH ++ +P+I HRD++S N+L+ +
Sbjct: 87 EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 146
Query: 172 DFKAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTG------QLTQKSDVY 222
+ IAD L+ + A D + RV GT Y APE + +++D+Y
Sbjct: 147 NGTCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIY 205
Query: 223 SFGVVLLEL 231
+ G+V E+
Sbjct: 206 AMGLVFWEI 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 159 HRDIRSSNVLLFEDFKAKIADFNLSNQAPDMA-ARLHSTRVLGTFGYHAPEYAMTGQLTQ 217
HRD++ N+L+ D A + DF +++ D +L +T +GT Y APE T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT--VGTLYYXAPERFSESHATY 214
Query: 218 KSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLS 258
++D+Y+ VL E LTG P + + A PR S
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPS 255
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
L+YL + IIHRD++ N+LL E I DFN++ P T + GT Y
Sbjct: 127 ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAGTKPY 180
Query: 205 HAPEYAMTGQLTQKS---DVYSFGVVLLELLTGRKP 237
APE + + S D +S GV ELL GR+P
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 23/129 (17%)
Query: 125 QPGPVLDWMTR--------VRIAVDAARGLEYLHEKV-----QPSIIHRDIRSSNVLLFE 171
+ G + D++ R +++A+ A GL +LH ++ +P+I HRD++S N+L+ +
Sbjct: 85 EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 144
Query: 172 DFKAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTG------QLTQKSDVY 222
+ IAD L+ + A D + RV GT Y APE + +++D+Y
Sbjct: 145 NGTCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIY 203
Query: 223 SFGVVLLEL 231
+ G+V E+
Sbjct: 204 AMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 23/129 (17%)
Query: 125 QPGPVLDWMTR--------VRIAVDAARGLEYLHEKV-----QPSIIHRDIRSSNVLLFE 171
+ G + D++ R +++A+ A GL +LH ++ +P+I HRD++S N+L+ +
Sbjct: 84 EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 143
Query: 172 DFKAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTG------QLTQKSDVY 222
+ IAD L+ + A D + RV GT Y APE + +++D+Y
Sbjct: 144 NGTCCIADLGLAVRHDSATDTIDIAPNHRV-GTKRYMAPEVLDDSINMKHFESFKRADIY 202
Query: 223 SFGVVLLEL 231
+ G+V E+
Sbjct: 203 AMGLVFWEI 211
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
+ + + L YLHE+ II+RD++ NVLL + K+ D+ + + + ++
Sbjct: 116 SAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXF 170
Query: 199 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
GT Y APE D ++ GV++ E++ GR P D
Sbjct: 171 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ V+ RL H N+++L L E T G L D + KG
Sbjct: 99 IGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIV-EKGYYSE---------- 147
Query: 135 RVRIAVDAAR----GLEYLHEKVQPSIIHRDIRSSNVLLFE---DFKAKIADFNLSNQAP 187
R A DA + + YLHE I+HRD++ N+L D KIADF LS
Sbjct: 148 --RDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI-- 200
Query: 188 DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ ++ V GT GY APE + D++S G++ LL G +P
Sbjct: 201 -VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
+ + + L YLHE+ II+RD++ NVLL + K+ D+ + + + ++
Sbjct: 127 SAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXF 181
Query: 199 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
GT Y APE D ++ GV++ E++ GR P D
Sbjct: 182 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S G ++ E++ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
+ + + L YLHE+ II+RD++ NVLL + K+ D+ + + + ++
Sbjct: 112 SAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSXF 166
Query: 199 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
GT Y APE D ++ GV++ E++ GR P D
Sbjct: 167 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
+ + + L YLHE+ II+RD++ NVLL + K+ D+ + + + ++
Sbjct: 159 SAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSTF 213
Query: 199 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
GT Y APE D ++ GV++ E++ GR P D
Sbjct: 214 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 98 LRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTR-----VRIAV-DAARGLEYLHE 151
L L Y F T LH IL + G + L R V+I V + LE+LH
Sbjct: 121 LVTLHYAFQTETKLHLIL---DYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH- 176
Query: 152 KVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ-APDMAARLHSTRVLGTFGYHAPEYA 210
+ II+RDI+ N+LL + + DF LS + D R + GT Y AP+
Sbjct: 177 --KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD--FCGTIEYMAPDIV 232
Query: 211 MTGQLTQKS--DVYSFGVVLLELLTGRKPVDHTMPRGQQSLVT 251
G D +S GV++ ELLTG P + Q+ ++
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + D++S G ++ EL+ G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+S++ L H N+V+LL N L +EF L D + + G P P++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDA-SALTGI-PLPLIK--- 106
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+GL + H ++HRD++ N+L+ + K+ADF L+ +A + R +
Sbjct: 107 --SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-RAFGVPVRTY 160
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTMPRGQQSLVT 251
V+ T Y APE + + + D++S G + E++T R P D + + + T
Sbjct: 161 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 219
Query: 252 WATP 255
TP
Sbjct: 220 LGTP 223
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 100
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 101 PLPLIK-----SYLFQLLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 151
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R ++ V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 152 AFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 211 DQLFRIFRTLGTP 223
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 20/186 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ--PGPVLDW 132
+S++ L H N+V+LL N L +EF LH L P P++
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK- 110
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+GL + H ++HRD++ N+L+ + K+ADF L+ +A + R
Sbjct: 111 ----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVR 162
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTMPRGQQSL 249
++ V+ T Y APE + + + D++S G + E++T R P D + + +
Sbjct: 163 TYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 221
Query: 250 VTWATP 255
T TP
Sbjct: 222 RTLGTP 227
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 101
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 102 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 152
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R ++ V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 153 AFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 212 DQLFRIFRTLGTP 224
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 100
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 101 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 151
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R ++ V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 152 AFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 211 DQLFRIFRTLGTP 223
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 99
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 100 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 150
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R ++ V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 151 AFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 210 DQLFRIFRTLGTP 222
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 53 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 107
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 108 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 158
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R ++ V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 159 AFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 217
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 218 DQLFRIFRTLGTP 230
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 20/186 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ--PGPVLDW 132
+S++ L H N+V+LL N L +EF LH L P P++
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK- 113
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+GL + H ++HRD++ N+L+ + K+ADF L+ +A + R
Sbjct: 114 ----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVR 165
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTMPRGQQSL 249
++ V+ T Y APE + + + D++S G + E++T R P D + + +
Sbjct: 166 TYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
Query: 250 VTWATP 255
T TP
Sbjct: 225 RTLGTP 230
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 20/186 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ--PGPVLDW 132
+S++ L H N+V+LL N L +EF LH L P P++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK- 106
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+GL + H ++HRD++ N+L+ + K+ADF L+ +A + R
Sbjct: 107 ----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVR 158
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTMPRGQQSL 249
++ V+ T Y APE + + + D++S G + E++T R P D + + +
Sbjct: 159 TYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 250 VTWATP 255
T TP
Sbjct: 218 RTLGTP 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 41/190 (21%)
Query: 60 RLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRK 119
RL+ + P + VS++ LKH N+V +LHDI+H K
Sbjct: 36 RLEHEEGAPCTAIREVSLLKDLKHANIV----------------------TLHDIIHTEK 73
Query: 120 GVQGA-------------QPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSN 166
+ G +++ RGL Y H + ++HRD++ N
Sbjct: 74 SLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQN 130
Query: 167 VLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAM-TGQLTQKSDVYSFG 225
+L+ E + K+ADF L+ +A + + + V+ T Y P+ + + + + D++ G
Sbjct: 131 LLINERGELKLADFGLA-RAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQIDMWGVG 188
Query: 226 VVLLELLTGR 235
+ E+ TGR
Sbjct: 189 CIFYEMATGR 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 100
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 101 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 151
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R ++ V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 152 AFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 211 DQLFRIFRTLGTP 223
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 99
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 100 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 150
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R ++ V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 151 AFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 210 DQLFRIFRTLGTP 222
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 100
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 101 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 151
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R ++ V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 152 AFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 211 DQLFRIFRTLGTP 223
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 99
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 100 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 150
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R ++ V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 151 AFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 210 DQLFRIFRTLGTP 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 139 AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRV 198
A + L +LH+K II+RD++ NVLL + K+ADF + + + + +
Sbjct: 130 AAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG--ICNGVTTATF 184
Query: 199 LGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
GT Y APE D ++ GV+L E+L G P +
Sbjct: 185 CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPEVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 58 NERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
N + S +++ E++ + LKH N+V L E L ++ T G L + +
Sbjct: 65 NTKKLSARDHQKLERE-ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 123
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-- 175
R+ A + + LE ++ Q I+HRD++ N+LL K
Sbjct: 124 REYYSEADASHCIHQI------------LESVNHIHQHDIVHRDLKPENLLLASKCKGAA 171
Query: 176 -KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
K+ADF L+ + GT GY +PE + D+++ GV+L LL G
Sbjct: 172 VKLADFGLAIEVQGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
Query: 235 RKP 237
P
Sbjct: 230 YPP 232
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 35/177 (19%)
Query: 83 HENLVELLGYCVEGNLRVLAYEFATMGS-LHDILHGRKGVQGAQPGPVLDWMTRVRIAVD 141
HEN+V LL N R + F M + LH ++ +L+ + + +
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRAN----------ILEPVHKQYVVYQ 117
Query: 142 AARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHS------ 195
+ ++YLH ++HRD++ SN+LL + K+ADF LS ++ ++
Sbjct: 118 LIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSIN 174
Query: 196 -------------TRVLGTFGYHAPEYAM-TGQLTQKSDVYSFGVVLLELLTGRKPV 238
T + T Y APE + + + T+ D++S G +L E+L G KP+
Sbjct: 175 ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 71 EKQL----VSVVSRLKHENLVELLGYCVEGNLRVL--AYEFATMGSLHDILHGRKGVQGA 124
EKQ+ V+++ LKH N+V ++ L E+ G L ++ +G
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGT 102
Query: 125 QPGPVLDWMTRVRIAVDAARGLEYLHEKVQP--SIIHRDIRSSNVLLFEDFKAKIADFNL 182
+ LD +R+ L+ H + +++HRD++ +NV L K+ DF L
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 183 S---NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLEL 231
+ N A +GT Y +PE +KSD++S G +L EL
Sbjct: 163 ARILNHDTSFAKTF-----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 71 EKQL----VSVVSRLKHENLVELLGYCVEGNLRVL--AYEFATMGSLHDILHGRKGVQGA 124
EKQ+ V+++ LKH N+V ++ L E+ G L ++ +G
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGT 102
Query: 125 QPGPVLDWMTRVRIAVDAARGLEYLHEKVQP--SIIHRDIRSSNVLLFEDFKAKIADFNL 182
+ LD +R+ L+ H + +++HRD++ +NV L K+ DF L
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 183 S---NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLEL 231
+ N A +GT Y +PE +KSD++S G +L EL
Sbjct: 163 ARILNHDTSFAKAF-----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 103
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 104 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 154
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 155 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 214 DQLFRIFRTLGTP 226
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 48 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 102
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 103 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 153
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 154 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 213 DQLFRIFRTLGTP 225
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGI 103
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 104 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 154
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 155 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 214 DQLFRIFRTLGTP 226
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 49 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 103
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 104 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 154
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 155 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 214 DQLFRIFRTLGTP 226
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 20/186 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ--PGPVLDW 132
+S++ L H N+V+LL N L +EF LH L P P++
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK- 105
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+GL + H ++HRD++ N+L+ + K+ADF L+ +A + R
Sbjct: 106 ----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVR 157
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTMPRGQQSL 249
+ V+ T Y APE + + + D++S G + E++T R P D + + +
Sbjct: 158 TYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 250 VTWATP 255
T TP
Sbjct: 217 RTLGTP 222
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 100
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 101 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 151
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 152 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 211 DQLFRIFRTLGTP 223
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 48 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 102
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 103 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-R 153
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 154 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 213 DQLFRIFRTLGTP 225
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 101
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 102 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLA-R 152
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 153 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 212 DQLFRIFRTLGTP 224
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
VS++ ++ H N++ L VL E + G L D L ++ + + + +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSNQAPDMA 190
G+ YLH K I H D++ N++L + K+ DF L+++ D
Sbjct: 126 D---------GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-- 171
Query: 191 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 172 -GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 48 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 102
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 103 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 153
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 154 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 212
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 213 DQLFRIFRTLGTP 225
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
VS++ ++ H N++ L VL E + G L D L ++ + + + +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSNQAPDMA 190
G+ YLH K I H D++ N++L + K+ DF L+++ D
Sbjct: 126 D---------GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-- 171
Query: 191 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 172 -GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 100
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 101 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 151
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 152 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 211 DQLFRIFRTLGTP 223
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 101
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 102 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 152
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 153 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 212 DQLFRIFRTLGTP 224
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 99
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 100 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 150
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 151 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 210 DQLFRIFRTLGTP 222
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 25/193 (12%)
Query: 55 SHENERLKSPKNYPDDEK------QLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFAT- 107
+HE LK + DDE + + ++ LKH+N+V L L +EF
Sbjct: 26 THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85
Query: 108 -MGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSN 166
+ D +G P V ++ ++ +GL + H + +++HRD++ N
Sbjct: 86 DLKKYFDSCNG-----DLDPEIVKSFLFQL------LKGLGFCHSR---NVLHRDLKPQN 131
Query: 167 VLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFG 225
+L+ + + K+A+F L+ +A + R +S V+ T Y P+ +L S D++S G
Sbjct: 132 LLINRNGELKLANFGLA-RAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSIDMWSAG 189
Query: 226 VVLLELLTGRKPV 238
+ EL +P+
Sbjct: 190 CIFAELANAGRPL 202
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 142 AARGLEYLHEKVQPSIIHRDIRSSNVLLFED-FKAKIADFN--LSNQAPDMAAR--LHST 196
A GLEYLH + I+H D+++ NVLL D +A + DF L Q PD + L
Sbjct: 159 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 214
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ GT + APE M K D++S ++L +L G P
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 142 AARGLEYLHEKVQPSIIHRDIRSSNVLLFED-FKAKIADFN--LSNQAPDMAAR--LHST 196
A GLEYLH + I+H D+++ NVLL D +A + DF L Q PD + L
Sbjct: 175 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 230
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ GT + APE M K D++S ++L +L G P
Sbjct: 231 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 50 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 104
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 105 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 155
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 156 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 214
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 215 DQLFRIFRTLGTP 227
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 47 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 101
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 102 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 152
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 153 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 211
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 212 DQLFRIFRTLGTP 224
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ-- 125
P + +S++ L H N+V+LL N L +EF LH L
Sbjct: 46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGI 100
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 101 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 151
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R + V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 152 AFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 211 DQLFRIFRTLGTP 223
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
VS++ ++ H N++ L VL E + G L D L ++ + + + +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSNQAPDMA 190
G+ YLH K I H D++ N++L + K+ DF L+++ D
Sbjct: 126 D---------GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-- 171
Query: 191 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 172 -GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
VS++ ++ H N++ L VL E + G L D L ++ + + + +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSNQAPDMA 190
G+ YLH K I H D++ N++L + K+ DF L+++ D
Sbjct: 126 D---------GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-- 171
Query: 191 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 172 -GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 20/186 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQ--PGPVLDW 132
+S++ L H N+V+LL N L +EF LH L P P++
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIK- 106
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAAR 192
+GL + H ++HRD++ N+L+ + K+ADF L+ +A + R
Sbjct: 107 ----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVR 158
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTMPRGQQSL 249
+ V+ T Y APE + + + D++S G + E++T R P D + + +
Sbjct: 159 TYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 250 VTWATP 255
T TP
Sbjct: 218 RTLGTP 223
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A + T Y
Sbjct: 140 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRYY 193
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
APE + + D++S G ++ E++ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
VS++ ++ H N++ L VL E + G L D L ++ + + + +
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSNQAPDMA 190
G+ YLH K I H D++ N++L + K+ DF L+++ D
Sbjct: 126 D---------GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-- 171
Query: 191 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 172 -GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 142 AARGLEYLHEKVQPSIIHRDIRSSNVLLFED-FKAKIADFN--LSNQAPDMAAR--LHST 196
A GLEYLH + I+H D+++ NVLL D +A + DF L Q PD + L
Sbjct: 173 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ-PDGLGKSLLTGD 228
Query: 197 RVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ GT + APE M K D++S ++L +L G P
Sbjct: 229 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
VS++ ++ H N++ L VL E + G L D L ++ + + + +
Sbjct: 66 VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI- 124
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSNQAPDMA 190
G+ YLH K I H D++ N++L + K+ DF L+++ D
Sbjct: 125 --------LDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG- 172
Query: 191 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ + GT + APE L ++D++S GV+ LL+G P
Sbjct: 173 --VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ KHEN++ + + + + LH Q + ++
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIY 119
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA--- 191
+ AV G ++IHRD++ SN+L+ + K+ DF L+ + AA
Sbjct: 120 QTLRAVKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 192 -----RLHSTRVLGTFGYHAPEYAMT-GQLTQKSDVYSFGVVLLELLTGRKPV 238
+ T + T Y APE +T + ++ DV+S G +L EL R+P+
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 75 VSVVSRLKHENLVELLG-YCVEGNLRV-LAYEFATMGSLHDILHGRKGVQGAQPGPVLDW 132
++++ LKH N++ L + + +V L +++A H I R +P +
Sbjct: 69 IALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 133 MTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF----EDFKAKIADFN---LSNQ 185
M + + G+ YLH ++HRD++ +N+L+ E + KIAD L N
Sbjct: 129 MVK-SLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGRKPVDH 240
A L V+ TF Y APE + + T+ D+++ G + ELLT +P+ H
Sbjct: 185 PLKPLADLDP--VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFH 237
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ KHEN++ + + + + LH Q + ++
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIY 119
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA--- 191
+ AV G ++IHRD++ SN+L+ + K+ DF L+ + AA
Sbjct: 120 QTLRAVKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 192 -----RLHSTRVLGTFGYHAPEYAMT-GQLTQKSDVYSFGVVLLELLTGRKPV 238
+ T + T Y APE +T + ++ DV+S G +L EL R+P+
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 83 HENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDA 142
H +++ L+ + L ++ G L D L + + + ++ R ++A
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIM------RSLLEA 212
Query: 143 ARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLS-NQAPDMAARLHSTRVLGT 201
+ +LH +I+HRD++ N+LL ++ + +++DF S + P R + GT
Sbjct: 213 ---VSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR----ELCGT 262
Query: 202 FGYHAPEYAMTGQ------LTQKSDVYSFGVVLLELLTGRKPVDH 240
GY APE ++ D+++ GV+L LL G P H
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 28/188 (14%)
Query: 58 NERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
N + S +++ E++ + LKH N+V L E L ++ T G L + +
Sbjct: 38 NTKKLSARDHQKLERE-ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA 96
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQ----PSIIHRDIRSSNVLLFEDF 173
R+ A DA+ ++ + E V I+HRD++ N+LL
Sbjct: 97 REYYSEA----------------DASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKS 140
Query: 174 KA---KIADFNLSNQAP-DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLL 229
K K+ADF L+ + D A GT GY +PE + D+++ GV+L
Sbjct: 141 KGAAVKLADFGLAIEVQGDQQAWFGFA---GTPGYLSPEVLRKDPYGKPVDMWACGVILY 197
Query: 230 ELLTGRKP 237
LL G P
Sbjct: 198 ILLVGYPP 205
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 118 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 166 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 13/191 (6%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQ 122
SP +D K+ S+ LKH ++VELL + + +EF L + V+
Sbjct: 65 SPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL-----CFEIVK 119
Query: 123 GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA---KIAD 179
A G V L Y H+ +IIHRD++ VLL + K+
Sbjct: 120 RADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGG 176
Query: 180 FNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
F ++ Q + + + RV GT + APE + DV+ GV+L LL+G P
Sbjct: 177 FGVAIQLGE-SGLVAGGRV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234
Query: 240 HTMPRGQQSLV 250
T R + ++
Sbjct: 235 GTKERLFEGII 245
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 118 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 166 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 27/165 (16%)
Query: 81 LKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAV 140
LKH N+V L E L ++ T G L + + R+ A
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA---------------- 103
Query: 141 DAARGLEYLHEKVQ----PSIIHRDIRSSNVLLFEDFKA---KIADFNLSNQAP-DMAAR 192
DA+ ++ + E V I+HRD++ N+LL K K+ADF L+ + D A
Sbjct: 104 DASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW 163
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
GT GY +PE + D+++ GV+L LL G P
Sbjct: 164 FG---FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 13/191 (6%)
Query: 63 SPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQ 122
SP +D K+ S+ LKH ++VELL + + +EF L + V+
Sbjct: 67 SPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI-----VK 121
Query: 123 GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA---KIAD 179
A G V L Y H+ +IIHRD++ VLL + K+
Sbjct: 122 RADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGG 178
Query: 180 FNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
F ++ Q + + + RV GT + APE + DV+ GV+L LL+G P
Sbjct: 179 FGVAIQLGE-SGLVAGGRV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 236
Query: 240 HTMPRGQQSLV 250
T R + ++
Sbjct: 237 GTKERLFEGII 247
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 142 AARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFK-AKIADFNLS-NQAPDMAAR--LHSTR 197
A GLEYLH + I+H D+++ NVLL D A + DF + PD + L
Sbjct: 194 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 198 VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ GT + APE + K DV+S ++L +L G P
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 142 AARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFK-AKIADFNLS-NQAPDMAAR--LHSTR 197
A GLEYLH + I+H D+++ NVLL D A + DF + PD + L
Sbjct: 175 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 198 VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ GT + APE + K DV+S ++L +L G P
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 131 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 184
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 176 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 229
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V+++ ++H N++ L VL E + G L D L ++ + + L +
Sbjct: 66 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 125
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFE----DFKAKIADFNLSNQAPDMA 190
G+ YLH K I H D++ N++L + + + K+ DF ++++ +
Sbjct: 126 D---------GVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK---IE 170
Query: 191 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
A + GT + APE L ++D++S GV+ LL+G P
Sbjct: 171 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 139 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 139 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 137 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 190
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 232
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 131 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 184
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 28/167 (16%)
Query: 81 LKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAV 140
L+ N V+ + + + + E+ +L+D++H Q W R+
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY----W----RLFR 123
Query: 141 DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNL--------------SNQA 186
L Y+H + IIHRD++ N+ + E KI DF L S
Sbjct: 124 QILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 187 PDMAARLHSTRVLGTFGYHAPEYA-MTGQLTQKSDVYSFGVVLLELL 232
P + L T +GT Y A E TG +K D+YS G++ E++
Sbjct: 181 PGSSDNL--TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 23/191 (12%)
Query: 70 DEKQLVSVVSRL-KHENLVELLGYCVE----GNLRVLAYEFATMGSLHDILHGRKGVQGA 124
+E Q + + RL H N++ L+ YC+ + L F G+L + + K
Sbjct: 71 EEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLK----- 125
Query: 125 QPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSN 184
G L + + + RGLE +H K HRD++ +N+LL ++ + + D N
Sbjct: 126 DKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN 182
Query: 185 QAPDMAARLHSTRVLG-------TFGYHAPE-YAMTGQ--LTQKSDVYSFGVVLLELLTG 234
QA L T Y APE +++ + +++DV+S G VL ++ G
Sbjct: 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
Query: 235 RKPVDHTMPRG 245
P D +G
Sbjct: 243 EGPYDMVFQKG 253
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 176 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 229
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 271
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V+++ ++H N++ L VL E + G L D L ++ + + L +
Sbjct: 59 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 118
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFE----DFKAKIADFNLSNQAPDMA 190
G+ YLH K I H D++ N++L + + + K+ DF ++++ +
Sbjct: 119 D---------GVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK---IE 163
Query: 191 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
A + GT + APE L ++D++S GV+ LL+G P
Sbjct: 164 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 34/183 (18%)
Query: 69 DDEKQL------VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQ 122
D+E QL V + +HEN+V +G C+ + +L+ ++ K
Sbjct: 68 DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK--- 124
Query: 123 GAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNL 182
VLD +IA + +G+ YLH K I+H+D++S NV +++ K I DF L
Sbjct: 125 -----IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNV-FYDNGKVVITDFGL 175
Query: 183 SNQAPDMAA--RLHSTRVLGTFGYH-APEYAMTGQL-----------TQKSDVYSFGVVL 228
+ + + A R R+ + H APE + QL ++ SDV++ G +
Sbjct: 176 FSISGVLQAGRREDKLRIQNGWLCHLAPE--IIRQLSPDTEEDKLPFSKHSDVFALGTIW 233
Query: 229 LEL 231
EL
Sbjct: 234 YEL 236
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 31/180 (17%)
Query: 72 KQLVSVVSRLKHENLVELLG--YCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPV 129
K+ + ++ RL+H+N+++L+ Y E + E+ G +
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQE----------------M 97
Query: 130 LDWMTRVRIAVDAARG--------LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFN 181
LD + R V A G LEYLH + I+H+DI+ N+LL KI+
Sbjct: 98 LDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALG 154
Query: 182 LSNQAPDMAARLHSTRVLGTFGYHAPEYA--MTGQLTQKSDVYSFGVVLLELLTGRKPVD 239
++ AA G+ + PE A + K D++S GV L + TG P +
Sbjct: 155 VAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 58 NERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
N + S +++ E++ + LKH N+V L E L ++ T G L + +
Sbjct: 56 NTKKLSARDHQKLERE-ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA 114
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKV----QPSIIHRDIRSSNVLLFEDF 173
R+ A DA+ ++ + E V Q ++HRD++ N+LL
Sbjct: 115 REYYSEA----------------DASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKL 158
Query: 174 KA---KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLE 230
K K+ADF L+ + GT GY +PE + D+++ GV+L
Sbjct: 159 KGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 216
Query: 231 LLTGRKP 237
LL G P
Sbjct: 217 LLVGYPP 223
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ +L H ++++ + + + E G L D + G K ++ A +
Sbjct: 191 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFY 246
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
++ +AV +YLHE IIHRD++ NVLL ED KI DF S + +
Sbjct: 247 QMLLAV------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 296
Query: 192 RLHSTRVLGTFGYHAPEYAM---TGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQS 248
L T + GT Y APE + T + D +S GV+L L+G P R Q S
Sbjct: 297 -LMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVS 352
Query: 249 L 249
L
Sbjct: 353 L 353
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ +L H ++++ + + + E G L D + G K ++ A +
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFY 121
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
++ +AV +YLHE IIHRD++ NVLL ED KI DF S + +
Sbjct: 122 QMLLAV------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 171
Query: 192 RLHSTRVLGTFGYHAPEYAM---TGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQS 248
L T + GT Y APE + T + D +S GV+L L+G P R Q S
Sbjct: 172 -LMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVS 227
Query: 249 L 249
L
Sbjct: 228 L 228
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ +L H ++++ + + + E G L D + G K ++ A +
Sbjct: 65 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFY 120
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
++ +AV +YLHE IIHRD++ NVLL ED KI DF S + +
Sbjct: 121 QMLLAV------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 170
Query: 192 RLHSTRVLGTFGYHAPEYAM---TGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQS 248
L T + GT Y APE + T + D +S GV+L L+G P R Q S
Sbjct: 171 -LMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVS 226
Query: 249 L 249
L
Sbjct: 227 L 227
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ +L H ++++ + + + E G L D + G K ++ A +
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFY 121
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
++ +AV +YLHE IIHRD++ NVLL ED KI DF S + +
Sbjct: 122 QMLLAV------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 171
Query: 192 RLHSTRVLGTFGYHAPEYAM---TGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQS 248
L T + GT Y APE + T + D +S GV+L L+G P R Q S
Sbjct: 172 -LMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVS 227
Query: 249 L 249
L
Sbjct: 228 L 228
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 10/92 (10%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ--APDMAARLHSTRVLGT 201
+GLEYLH Q I+HRD++ +N+LL E+ K+ADF L+ +P+ R + +V+ T
Sbjct: 123 QGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---RAYXHQVV-T 175
Query: 202 FGYHAPEYAMTGQLTQKS-DVYSFGVVLLELL 232
Y APE ++ D+++ G +L ELL
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ +L H ++++ + + + E G L D + G K ++ A +
Sbjct: 66 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFY 121
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
++ +AV +YLHE IIHRD++ NVLL ED KI DF S + +
Sbjct: 122 QMLLAV------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 171
Query: 192 RLHSTRVLGTFGYHAPEYAM---TGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQS 248
L T + GT Y APE + T + D +S GV+L L+G P R Q S
Sbjct: 172 -LMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH--RTQVS 227
Query: 249 L 249
L
Sbjct: 228 L 228
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
++ + +S L+H LV L + N V+ YEF + G L + + ++
Sbjct: 202 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVE 259
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF--EDFKAKIADFNLSNQ-APD 188
+M +V +GL ++HE + +H D++ N++ + K+ DF L+ P
Sbjct: 260 YMRQV------CKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ ++ GT + APE A + +D++S GV+ LL+G P
Sbjct: 311 QSVKV----TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ +L H ++++ + + + E G L D + G K ++ A +
Sbjct: 205 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFY 260
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
++ +AV +YLHE IIHRD++ NVLL ED KI DF S + +
Sbjct: 261 QMLLAV------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS- 310
Query: 192 RLHSTRVLGTFGYHAPEYAM---TGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQS 248
L T + GT Y APE + T + D +S GV+L L+G P R Q S
Sbjct: 311 -LMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE--HRTQVS 366
Query: 249 L 249
L
Sbjct: 367 L 367
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGP 128
+D ++ VS++ ++H N++ L +L E G L D L ++ + +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 129 VLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSN 184
L + G+ YLH I H D++ N++L + + KI DF L++
Sbjct: 119 FLKQILN---------GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 185 QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ D + + GT + APE L ++D++S GV+ LL+G P
Sbjct: 167 KI-DFGNEFKN--IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 19/167 (11%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
V+++ ++H N++ L VL E + G L D L ++ + + L +
Sbjct: 80 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 139
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFE----DFKAKIADFNLSNQAPDMA 190
G+ YLH K I H D++ N++L + + + K+ DF ++++ +
Sbjct: 140 D---------GVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK---IE 184
Query: 191 ARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
A + GT + APE L ++D++S GV+ LL+G P
Sbjct: 185 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
++ + +S L+H LV L + N V+ YEF + G L + + ++
Sbjct: 96 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEA--VE 153
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF--EDFKAKIADFNLSNQ-APD 188
+M +V +GL ++HE + +H D++ N++ + K+ DF L+ P
Sbjct: 154 YMRQV------CKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 204
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+ ++ GT + APE A + +D++S GV+ LL+G P
Sbjct: 205 QSVKV----TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ +L H ++++ + + + E G L D + G K ++ A +
Sbjct: 72 IEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFY 127
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAA 191
++ +AV +YLHE IIHRD++ NVLL ED KI DF S +
Sbjct: 128 QMLLAV------QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK----ILG 174
Query: 192 RLHSTRVL-GTFGYHAPEYAM---TGQLTQKSDVYSFGVVLLELLTGRKP 237
R L GT Y APE + T + D +S GV+L L+G P
Sbjct: 175 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 16/148 (10%)
Query: 100 VLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIH 159
VL E T G+L L K + + + W ++ +GL++LH + P IIH
Sbjct: 105 VLVTELXTSGTLKTYL---KRFKVXKIKVLRSWCRQI------LKGLQFLHTRT-PPIIH 154
Query: 160 RDIRSSNVLLFE-DFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQK 218
RD++ N+ + KI D L+ A+ V+GT + APE + +
Sbjct: 155 RDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFXAPE-XYEEKYDES 209
Query: 219 SDVYSFGVVLLELLTGRKPVDHTMPRGQ 246
DVY+FG LE T P Q
Sbjct: 210 VDVYAFGXCXLEXATSEYPYSECQNAAQ 237
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 227
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 71/173 (41%), Gaps = 19/173 (10%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ KHEN++ + + + + LH Q + ++
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIY 119
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA--- 191
+ AV G ++IHRD++ SN+L+ + K+ DF L+ + AA
Sbjct: 120 QTLRAVKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 192 -----RLHSTRVLGTFGYHAPEYAMT-GQLTQKSDVYSFGVVLLELLTGRKPV 238
+ + T Y APE +T + ++ DV+S G +L EL R+P+
Sbjct: 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A T + T Y
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 196
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 238
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 136 VRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF---KAKIADFNLSNQAPDMAAR 192
+R+ G+ YLH Q +I+H D++ N+LL + KI DF +S + A
Sbjct: 134 IRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH-ACE 189
Query: 193 LHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
L ++GT Y APE +T +D+++ G++ LLT P
Sbjct: 190 LR--EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 25/168 (14%)
Query: 83 HENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDA 142
++N++EL+ + + L +E GS+ + +K + R+ D
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS---------RVVRDV 120
Query: 143 ARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA---KIADFNLS-----NQAPDMAARLH 194
A L++LH K I HRD++ N+L K KI DF+L N +
Sbjct: 121 AAALDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE 177
Query: 195 STRVLGTFGYHAPEYA--MTGQLT---QKSDVYSFGVVLLELLTGRKP 237
T G+ Y APE T Q T ++ D++S GVVL +L+G P
Sbjct: 178 LTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 23/198 (11%)
Query: 50 EESYPSHENERL----KSPKN--YPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRV 100
E Y +H+ E++ K+ K D++++ +S ++ L H ++V+L+G +E
Sbjct: 26 EGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTW 84
Query: 101 LAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHR 160
+ E G L L K L +T V ++ + + YL + +HR
Sbjct: 85 IIMELYPYGELGHYLERNKNS--------LKVLTLVLYSLQICKAMAYLE---SINCVHR 133
Query: 161 DIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSD 220
DI N+L+ K+ DF LS D S L + +PE + T SD
Sbjct: 134 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASD 192
Query: 221 VYSFGVVLLELLT-GRKP 237
V+ F V + E+L+ G++P
Sbjct: 193 VWMFAVCMWEILSFGKQP 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 23/198 (11%)
Query: 50 EESYPSHENERL----KSPKN--YPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRV 100
E Y +H+ E++ K+ K D++++ +S ++ L H ++V+L+G +E
Sbjct: 42 EGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTW 100
Query: 101 LAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHR 160
+ E G L L K L +T V ++ + + YL + +HR
Sbjct: 101 IIMELYPYGELGHYLERNKNS--------LKVLTLVLYSLQICKAMAYLE---SINCVHR 149
Query: 161 DIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSD 220
DI N+L+ K+ DF LS D S L + +PE + T SD
Sbjct: 150 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASD 208
Query: 221 VYSFGVVLLELLT-GRKP 237
V+ F V + E+L+ G++P
Sbjct: 209 VWMFAVCMWEILSFGKQP 226
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 23/198 (11%)
Query: 50 EESYPSHENERL----KSPKN--YPDDEKQLVS---VVSRLKHENLVELLGYCVEGNLRV 100
E Y +H+ E++ K+ K D++++ +S ++ L H ++V+L+G +E
Sbjct: 30 EGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTW 88
Query: 101 LAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHR 160
+ E G L L K L +T V ++ + + YL + +HR
Sbjct: 89 IIMELYPYGELGHYLERNKNS--------LKVLTLVLYSLQICKAMAYLE---SINCVHR 137
Query: 161 DIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSD 220
DI N+L+ K+ DF LS D S L + +PE + T SD
Sbjct: 138 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASD 196
Query: 221 VYSFGVVLLELLT-GRKP 237
V+ F V + E+L+ G++P
Sbjct: 197 VWMFAVCMWEILSFGKQP 214
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 31/194 (15%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+ ++ +LKH NLV LL L +E+ LH++ ++GV + W T
Sbjct: 53 IRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSI-TWQT 111
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+ + + H+ + IHRD++ N+L+ + K+ DF + + +
Sbjct: 112 --------LQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD--Y 158
Query: 195 STRVLGTFGYHAPEYAM-TGQLTQKSDVYSFGVVLLELLTG----------------RKP 237
+ T Y +PE + Q DV++ G V ELL+G RK
Sbjct: 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKT 218
Query: 238 VDHTMPRGQQSLVT 251
+ +PR QQ T
Sbjct: 219 LGDLIPRHQQVFST 232
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 156 SIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMT--- 212
+IHRD++ N+LL + K+ADF + D +H +GT Y +PE +
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTCMKM-DETGMVHCDTAVGTPDYISPEVLKSQGG 252
Query: 213 -GQLTQKSDVYSFGVVLLELLTGRKP 237
G ++ D +S GV L E+L G P
Sbjct: 253 DGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 57 ENERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFA-TMGSLHDIL 115
ENE+ + +P + + ++ LKHEN+V L+ C R A + GS++ +
Sbjct: 54 ENEK----EGFPITALREIKILQLLKHENVVNLIEIC-----RTKASPYNRCKGSIYLVF 104
Query: 116 HGRKGVQGAQPGPVLDWMTRV---RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFED 172
+ VL T R+ GL Y+H I+HRD++++NVL+ D
Sbjct: 105 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRD 161
Query: 173 FKAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ-LTQKSDVYSFGVVL 228
K+ADF L+ + A + + RV+ T Y PE + + D++ G ++
Sbjct: 162 GVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIM 220
Query: 229 LELLTGRKPV 238
E+ T R P+
Sbjct: 221 AEMWT-RSPI 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 57 ENERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFA-TMGSLHDIL 115
ENE+ + +P + + ++ LKHEN+V L+ C R A + GS++ +
Sbjct: 53 ENEK----EGFPITALREIKILQLLKHENVVNLIEIC-----RTKASPYNRCKGSIYLVF 103
Query: 116 HGRKGVQGAQPGPVLDWMTRV---RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFED 172
+ VL T R+ GL Y+H I+HRD++++NVL+ D
Sbjct: 104 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRD 160
Query: 173 FKAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ-LTQKSDVYSFGVVL 228
K+ADF L+ + A + + RV+ T Y PE + + D++ G ++
Sbjct: 161 GVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIM 219
Query: 229 LELLTGRKPV 238
E+ T R P+
Sbjct: 220 AEMWT-RSPI 228
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 57 ENERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFA-TMGSLHDIL 115
ENE+ + +P + + ++ LKHEN+V L+ C R A + GS++ +
Sbjct: 54 ENEK----EGFPITALREIKILQLLKHENVVNLIEIC-----RTKASPYNRCKGSIYLVF 104
Query: 116 HGRKGVQGAQPGPVLDWMTRV---RIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFED 172
+ VL T R+ GL Y+H I+HRD++++NVL+ D
Sbjct: 105 DFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRD 161
Query: 173 FKAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ-LTQKSDVYSFGVVL 228
K+ADF L+ + A + + RV+ T Y PE + + D++ G ++
Sbjct: 162 GVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIM 220
Query: 229 LELLTGRKPV 238
E+ T R P+
Sbjct: 221 AEMWT-RSPI 229
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 18/169 (10%)
Query: 72 KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLD 131
K +SV+++L H NL++L N VL E+ G L D + L
Sbjct: 134 KNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRI--------IDESYNLT 185
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFE-DFKA-KIADFNLSNQ-APD 188
+ + G+ ++H Q I+H D++ N+L D K KI DF L+ + P
Sbjct: 186 ELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242
Query: 189 MAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
+++ GT + APE ++ +D++S GV+ LL+G P
Sbjct: 243 EKLKVN----FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 82 KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVD 141
+H N++ L +G + E G L D + +K + VL +T+
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKT----- 128
Query: 142 AARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSNQAPDMAARLHSTR 197
+EYLH + ++HRD++ SN+L ++ +I DF + Q L +
Sbjct: 129 ----VEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC 181
Query: 198 VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
F APE D++S GV+L +LTG P
Sbjct: 182 YTANFV--APEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 68 PDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFA--TMGSLHDILHGRKGVQGAQ 125
P + +S++ L H N+V+LL N L +E + + D
Sbjct: 45 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMD-----ASALTGI 99
Query: 126 PGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ 185
P P++ +GL + H ++HRD++ N+L+ + K+ADF L+ +
Sbjct: 100 PLPLIK-----SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-R 150
Query: 186 APDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTM 242
A + R ++ V+ T Y APE + + + D++S G + E++T R P D +
Sbjct: 151 AFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 209
Query: 243 PRGQQSLVTWATP 255
+ + T TP
Sbjct: 210 DQLFRIFRTLGTP 222
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 26/187 (13%)
Query: 58 NERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHG 117
N + S +++ E++ + LKH N+V L E L ++ T G L + +
Sbjct: 45 NTKKLSARDHQKLERE-ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA 103
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKV----QPSIIHRDIRSSNVLLFEDF 173
R+ A DA+ ++ + E V Q ++HR+++ N+LL
Sbjct: 104 REYYSEA----------------DASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL 147
Query: 174 KA---KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLE 230
K K+ADF L+ + GT GY +PE + D+++ GV+L
Sbjct: 148 KGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 205
Query: 231 LLTGRKP 237
LL G P
Sbjct: 206 LLVGYPP 212
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A + + V+ + Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMEPEVVTRY-Y 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
GL LHE ++HRD+ N+LL ++ I DFNL+ + A + T + Y
Sbjct: 146 GLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLARED---TADANKTHYVTHRWY 199
Query: 205 HAPEYAMTGQ-LTQKSDVYSFGVVLLELLT 233
APE M + T+ D++S G V+ E+
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
GL LHE ++HRD+ N+LL ++ I DFNL+ + A + T + Y
Sbjct: 146 GLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLARED---TADANKTHYVTHRWY 199
Query: 205 HAPEYAMTGQ-LTQKSDVYSFGVVLLELLT 233
APE M + T+ D++S G V+ E+
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 18/160 (11%)
Query: 82 KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVD 141
+H N++ L +G + E G L D + +K + VL +T+
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKT----- 128
Query: 142 AARGLEYLHEKVQPSIIHRDIRSSNVLLFEDF----KAKIADFNLSNQAPDMAARLHSTR 197
+EYLH + ++HRD++ SN+L ++ +I DF + Q L +
Sbjct: 129 ----VEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 198 VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
F APE D++S GV+L LTG P
Sbjct: 182 YTANFV--APEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 23/168 (13%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
++++SR++H N++++L L E GS D+ P LD
Sbjct: 80 IAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLF------AFIDRHPRLDEPL 131
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
I + YL K IIHRDI+ N+++ EDF K+ DF AA L
Sbjct: 132 ASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG-------SAAYLE 181
Query: 195 STRVL----GTFGYHAPEYAMTGQLTQ-KSDVYSFGVVLLELLTGRKP 237
++ GT Y APE M + +++S GV L L+ P
Sbjct: 182 RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 24/183 (13%)
Query: 62 KSPKNYPDDE---KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHD-ILHG 117
K PK + +D KQ + ++ L H N++ L + L E T G L + ++H
Sbjct: 41 KIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK 100
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFE---DFK 174
R V RI D + Y H + ++ HRD++ N L D
Sbjct: 101 R----------VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSP 147
Query: 175 AKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
K+ DF L+ A ++ T+V GT Y +P+ + G + D +S GV++ LL G
Sbjct: 148 LKLIDFGLA--ARFKPGKMMRTKV-GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
Query: 235 RKP 237
P
Sbjct: 204 YPP 206
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 24/183 (13%)
Query: 62 KSPKNYPDDE---KQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHD-ILHG 117
K PK + +D KQ + ++ L H N++ L + L E T G L + ++H
Sbjct: 58 KIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK 117
Query: 118 RKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFE---DFK 174
R V RI D + Y H + ++ HRD++ N L D
Sbjct: 118 R----------VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSP 164
Query: 175 AKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
K+ DF L+ A ++ T+V GT Y +P+ + G + D +S GV++ LL G
Sbjct: 165 LKLIDFGLA--ARFKPGKMMRTKV-GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
Query: 235 RKP 237
P
Sbjct: 221 YPP 223
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 16/184 (8%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMT 134
+S++ L H N+V+LL N L +E L + + G P P++
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDA-SALTGI-PLPLIK--- 109
Query: 135 RVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLH 194
+GL + H ++HRD++ N+L+ + K+ADF L+ +A + R +
Sbjct: 110 --SYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA-RAFGVPVRTY 163
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLTGRK--PVDHTMPRGQQSLVT 251
V+ T Y APE + + + D++S G + E++T R P D + + + T
Sbjct: 164 XHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 222
Query: 252 WATP 255
TP
Sbjct: 223 LGTP 226
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGY 204
G+++LH IIHRD++ SN+++ D KI DF L+ A + + V+ + Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMEPEVVTRY-Y 191
Query: 205 HAPEYAMTGQLTQKSDVYSFGVVLLE------LLTGRKPVDH 240
APE + + D++S G ++ E L GR +D
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 233
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTFGY 204
LE +H Q I+H D++ +N L+ D K+ DF ++NQ PD + + ++V GT Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 174
Query: 205 HAPEYAMTGQLTQKS-----------DVYSFGVVLLELLTGRKPVDHTM 242
PE ++++ DV+S G +L + G+ P +
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 223
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTFGY 204
LE +H Q I+H D++ +N L+ D K+ DF ++NQ PD + + ++V GT Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 178
Query: 205 HAPEYAMTGQLTQKS-----------DVYSFGVVLLELLTGRKPVDHTM 242
PE ++++ DV+S G +L + G+ P +
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 227
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ-APDMAARLHSTRVLGTFGY 204
LE +H Q I+H D++ +N L+ D K+ DF ++NQ PD + + ++V GT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 222
Query: 205 HAPEYAMTGQLTQKS-----------DVYSFGVVLLELLTGRKP 237
PE ++++ DV+S G +L + G+ P
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 26/192 (13%)
Query: 57 ENERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEF----ATMGSLH 112
ENE+ + +P + + ++ LKHEN+V L+ C R A + A++ +
Sbjct: 54 ENEK----EGFPITALREIKILQLLKHENVVNLIEIC-----RTKASPYNRCKASIYLVF 104
Query: 113 DIL-HGRKGV-QGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF 170
D H G+ L + RV + GL Y+H I+HRD++++NVL+
Sbjct: 105 DFCEHDLAGLLSNVLVKFTLSEIKRVMQML--LNGLYYIHRN---KILHRDMKAANVLIT 159
Query: 171 EDFKAKIADFNLS---NQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ-LTQKSDVYSFGV 226
D K+ADF L+ + A + + RV+ T Y PE + + D++ G
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 227 VLLELLTGRKPV 238
++ E+ T R P+
Sbjct: 219 IMAEMWT-RSPI 229
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 26/183 (14%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLR--VLAYEFATMGSLHDILHGRKGVQGAQP 126
D + + V+ +L H+N+V+L E R VL EF GSL+ +L G
Sbjct: 52 DVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL-- 109
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVL--LFEDFKA--KIADFNL 182
P +++ +R D G+ +L E I+HR+I+ N++ + ED ++ K+ DF
Sbjct: 110 -PESEFLIVLR---DVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162
Query: 183 SNQAPDMAARLHSTRVLGTFGYHAP---EYAMTGQLTQKS-----DVYSFGVVLLELLTG 234
+ + D + GT Y P E A+ + QK D++S GV TG
Sbjct: 163 ARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
Query: 235 RKP 237
P
Sbjct: 220 SLP 222
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 120 GVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIAD 179
GVQ A+ GP+ DW + ++ +RGL+ L V +I+ D F+ F A+ +D
Sbjct: 250 GVQKAENGPI-DWSGDMPVSCSLSRGLQVLLTPVLANILEAD--QEKCWGFDQFFAETSD 306
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNL--------------SNQAPDMA 190
L Y+H + IIHR+++ N+ + E KI DF L S P +
Sbjct: 128 ALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 191 ARLHSTRVLGTFGYHAPEYA-MTGQLTQKSDVYSFGVVLLELL----TGRKPVD 239
L T +GT Y A E TG +K D YS G++ E + TG + V+
Sbjct: 185 DNL--TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVN 236
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTFGY 204
LE +H Q I+H D++ +N L+ D K+ DF ++NQ PD + + ++V GT Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 175
Query: 205 HAPEYAMTGQLTQKS-----------DVYSFGVVLLELLTGRKPVDHTM 242
PE ++++ DV+S G +L + G+ P +
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 224
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 26/183 (14%)
Query: 69 DDEKQLVSVVSRLKHENLVELLGYCVEGNLR--VLAYEFATMGSLHDILHGRKGVQGAQP 126
D + + V+ +L H+N+V+L E R VL EF GSL+ +L G
Sbjct: 52 DVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL-- 109
Query: 127 GPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVL--LFEDFKA--KIADFNL 182
P +++ +R D G+ +L E I+HR+I+ N++ + ED ++ K+ DF
Sbjct: 110 -PESEFLIVLR---DVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162
Query: 183 SNQAPDMAARLHSTRVLGTFGYHAP---EYAMTGQLTQKS-----DVYSFGVVLLELLTG 234
+ + D + GT Y P E A+ + QK D++S GV TG
Sbjct: 163 ARELEDDE---QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
Query: 235 RKP 237
P
Sbjct: 220 SLP 222
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 120 GVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIAD 179
GVQ A+ GP+ DW + ++ +RGL+ L V +I+ D F+ F A+ +D
Sbjct: 250 GVQKAENGPI-DWSGDMPVSCSLSRGLQVLLTPVLANILEAD--QEKCWGFDQFFAETSD 306
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ-APDMAARLHSTRVLGTFGY 204
LE +H Q I+H D++ +N L+ D K+ DF ++NQ PD + + ++V GT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 222
Query: 205 HAPEYAMTGQLTQKS-----------DVYSFGVVLLELLTGRKP 237
PE ++++ DV+S G +L + G+ P
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTFGY 204
LE +H Q I+H D++ +N L+ D K+ DF ++NQ PD + + ++V GT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GTVNY 194
Query: 205 HAPEYAMTGQLTQKS-----------DVYSFGVVLLELLTGRKPVDHTM 242
PE ++++ DV+S G +L + G+ P +
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
++ + +A+D+ L Y +HRDI+ NVLL + ++ADF + D
Sbjct: 180 YIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND-DG 229
Query: 192 RLHSTRVLGTFGYHAPEY--AM---TGQLTQKSDVYSFGVVLLELLTGRKP 237
+ S+ +GT Y +PE AM G+ + D +S GV + E+L G P
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
++ + +A+D+ L Y +HRDI+ NVLL + ++ADF + D
Sbjct: 196 YIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND-DG 245
Query: 192 RLHSTRVLGTFGYHAPEY--AM---TGQLTQKSDVYSFGVVLLELLTGRKP 237
+ S+ +GT Y +PE AM G+ + D +S GV + E+L G P
Sbjct: 246 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQA-PDMAARLHSTRVLGTFGY 204
LE +H Q I+H D++ +N L+ D K+ DF ++NQ PD + ++V GT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDXXXVVKDSQV-GTVNY 194
Query: 205 HAPEYAMTGQLTQKS-----------DVYSFGVVLLELLTGRKPVDHTM 242
PE ++++ DV+S G +L + G+ P +
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
++ + IA+D+ L Y +HRDI+ N+L+ + ++ADF + +
Sbjct: 180 YLAEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLME-DG 229
Query: 192 RLHSTRVLGTFGYHAPEY--AM---TGQLTQKSDVYSFGVVLLELLTGRKP 237
+ S+ +GT Y +PE AM G+ + D +S GV + E+L G P
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + K+ADF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + K+ADF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + K+ADF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + K+ADF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR-----VKGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 18/160 (11%)
Query: 82 KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVD 141
+H N++ L +G L E G L D + +K + VL +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTI-------- 130
Query: 142 AARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA----KIADFNLSNQAPDMAARLHSTR 197
+ +EYLH + ++HRD++ SN+L ++ +I DF + Q L +
Sbjct: 131 -GKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 198 VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
F APE + D++S G++L +L G P
Sbjct: 187 YTANF--VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 18/160 (11%)
Query: 82 KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVD 141
+H N++ L +G L E G L D + +K + VL +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTI-------- 130
Query: 142 AARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA----KIADFNLSNQAPDMAARLHSTR 197
+ +EYLH + ++HRD++ SN+L ++ +I DF + Q L +
Sbjct: 131 -GKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 198 VLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
F APE + D++S G++L +L G P
Sbjct: 187 YTANF--VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQ-APDMAARLHSTRVLGTFGY 204
LE +H Q I+H D++ +N L+ D K+ DF ++NQ PD + + ++V G Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQV-GAVNY 222
Query: 205 HAPEYAMTGQLTQKS-----------DVYSFGVVLLELLTGRKPVDHTM 242
PE ++++ DV+S G +L + G+ P +
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 53 YPSHENERLKSPKNYPDDEKQLVSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLH 112
+ N+++ S K+ DD K + +++ +K+E + G + + YE+ S+
Sbjct: 73 FTKSNNDKI-SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI- 130
Query: 113 DILHGRKGVQGAQPGPVLDWMTRVRIAVDAAR--------GLEYLHEKVQPSIIHRDIRS 164
++ + VLD I + + Y+H + +I HRD++
Sbjct: 131 --------LKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKP 180
Query: 165 SNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQ--KSDVY 222
SN+L+ ++ + K++DF S D ++ +R GT+ + PE+ K D++
Sbjct: 181 SNILMDKNGRVKLSDFGESEYMVD--KKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIW 236
Query: 223 SFGVVLLELLTGRKP 237
S G+ L + P
Sbjct: 237 SLGICLYVMFYNVVP 251
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 135 RVRI-AVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARL 193
R R A + A L YLH +I++RD++ N+LL + DF L + ++
Sbjct: 140 RARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNS 194
Query: 194 HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
++ GT Y APE + D + G VL E+L G P
Sbjct: 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
GL+Y+H + IIH DI+ NVL+ D + +++ H T + T
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 200
Query: 204 YHAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
Y +PE + +D++S ++ EL+TG
Sbjct: 201 YRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFG 203
GL+Y+H + IIH DI+ NVL+ D + +++ H T + T
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 200
Query: 204 YHAPEYAMTGQLTQKSDVYSFGVVLLELLTG 234
Y +PE + +D++S ++ EL+TG
Sbjct: 201 YRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 92 YCVEGNLRVLAYEFATMG-SLHDILH--GRKGVQGAQPGPVLDWMTRVRIAVDAARGLEY 148
+ VEG+ VL + +G SL D+ + RK L T + +A +E+
Sbjct: 71 FGVEGDYNVLVMDL--LGPSLEDLFNFCSRK----------LSLKTVLMLADQMINRVEF 118
Query: 149 LHEKVQPSIIHRDIRSSNVLLFEDFKAK---IADFNLSNQAPDMAARLH-----STRVLG 200
+H K S +HRDI+ N L+ +A I DF L+ + D + H + + G
Sbjct: 119 VHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTG 175
Query: 201 TFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
T Y + + + +++ D+ S G VL+ L G P
Sbjct: 176 TARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 212
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+++ + K+ DF L+ + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 157 IIHRDIRSSNVLLFED----FKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMT 212
++HRD++ N LLF D + KI DF + P L + T Y APE
Sbjct: 127 VVHRDLKPEN-LLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQ 183
Query: 213 GQLTQKSDVYSFGVVLLELLTGRKP 237
+ D++S GV+L +L+G+ P
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 28/119 (23%)
Query: 138 IAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLS-------------- 183
I + G ++HE IIHRD++ +N LL +D K+ DF L+
Sbjct: 134 ILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVND 190
Query: 184 ---NQAP-----DMAARLHSTRVLGTFGYHAPEYAMTGQLTQKS-DVYSFGVVLLELLT 233
N+ P ++ +L S V T Y APE + + KS D++S G + ELL
Sbjct: 191 LEENEEPGPHNKNLKKQLTSHVV--TRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ E ++ DF + + L GT Y
Sbjct: 141 FEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 192
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 220
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 152 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 205
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 169 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 222
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 141 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 194
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 171 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 224
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 198
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 186
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 186
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 186
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 220
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 186
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 134 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 187
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 145 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 198
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 161 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 214
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 137 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSXICSR 190
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 146 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 199
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 48 QVEESYPS--HENERLKSPKNYPDDEKQLVSVVSRLKH---------ENLVELLGYCVEG 96
QV ++Y H++ LK +N +Q + L+H N++ +L
Sbjct: 112 QVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171
Query: 97 NLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPS 156
N + +E +M +L++++ K QG V + + +DA LH+
Sbjct: 172 NHICMTFELLSM-NLYELIKKNK-FQGFSLPLVRKFAHSILQCLDA------LHKN---R 220
Query: 157 IIHRDIRSSNVLLFEDFKA--KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
IIH D++ N+LL + ++ K+ DF S +R Y APE + +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF-----YRAPEVILGAR 275
Query: 215 LTQKSDVYSFGVVLLELLTG 234
D++S G +L ELLTG
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 186
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 186
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 133 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 186
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+++ + K+ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 212 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 265
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+++ + K+ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 144 RGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKA-KIADFNLSNQAPDMAARLHSTRVLGTF 202
R L Y+H I HRDI+ N+LL D K+ DF + Q + + + +
Sbjct: 138 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ---LVRGEPNVSYICSR 191
Query: 203 GYHAPEYAMTG-QLTQKSDVYSFGVVLLELLTGR 235
Y APE T DV+S G VL ELL G+
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+++ + K+ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 48 QVEESYPS--HENERLKSPKNYPDDEKQLVSVVSRLKH---------ENLVELLGYCVEG 96
QV ++Y H++ LK +N +Q + L+H N++ +L
Sbjct: 112 QVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171
Query: 97 NLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPS 156
N + +E +M +L++++ K QG V + + +DA LH+
Sbjct: 172 NHICMTFELLSM-NLYELIKKNK-FQGFSLPLVRKFAHSILQCLDA------LHKN---R 220
Query: 157 IIHRDIRSSNVLLFEDFKA--KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
IIH D++ N+LL + ++ K+ DF S +R Y APE + +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGAR 275
Query: 215 LTQKSDVYSFGVVLLELLTG 234
D++S G +L ELLTG
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+++ + K+ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+++ + K+ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+++ + K+ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 48 QVEESYPS--HENERLKSPKNYPDDEKQLVSVVSRLKH---------ENLVELLGYCVEG 96
QV ++Y H++ LK +N +Q + L+H N++ +L
Sbjct: 112 QVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171
Query: 97 NLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPS 156
N + +E +M +L++++ K QG V + + +DA LH+
Sbjct: 172 NHICMTFELLSM-NLYELIKKNK-FQGFSLPLVRKFAHSILQCLDA------LHKN---R 220
Query: 157 IIHRDIRSSNVLLFEDFKA--KIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
IIH D++ N+LL + ++ K+ DF S +R Y APE + +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGAR 275
Query: 215 LTQKSDVYSFGVVLLELLTG 234
D++S G +L ELLTG
Sbjct: 276 YGMPIDMWSLGCILAELLTG 295
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 25/168 (14%)
Query: 83 HENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDA 142
H N++EL+ + E + L +E GS+ +H R+ + V+ D
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---------DV 120
Query: 143 ARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFK---AKIADFNLSN--QAPDMAARLHSTR 197
A L++LH K I HRD++ N+L + KI DF+L + + + + +
Sbjct: 121 ASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 198 VL---GTFGYHAPEY--AMTGQLT---QKSDVYSFGVVLLELLTGRKP 237
+L G+ Y APE A + + + ++ D++S GV+L LL+G P
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+++ + ++ DF L+ + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 143 ARGLEYLHEKVQPSIIHRDIRSSNVLL-------------FEDFKAKIADFNLSNQ--AP 187
A G+ +LH IIHRD++ N+L+ E+ + I+DF L + +
Sbjct: 143 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 188 DMAARLHSTRVLGTFGYHAPEY---AMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMP 243
R + GT G+ APE + +LT+ D++S G V +L+ G+ P
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 244 R 244
R
Sbjct: 260 R 260
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 143 ARGLEYLHEKVQPSIIHRDIRSSNVLL-------------FEDFKAKIADFNLSNQ--AP 187
A G+ +LH IIHRD++ N+L+ E+ + I+DF L + +
Sbjct: 143 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 188 DMAARLHSTRVLGTFGYHAPEY---AMTGQLTQKSDVYSFGVVLLELLT-GRKPVDHTMP 243
R + GT G+ APE + +LT+ D++S G V +L+ G+ P
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 244 R 244
R
Sbjct: 260 R 260
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ V +A+DA + + IHRD++ N+LL + K+ADF + +
Sbjct: 173 YTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEG 222
Query: 192 RLHSTRVLGTFGYHAPEYAMT----GQLTQKSDVYSFGVVLLELLTGRKP 237
+ +GT Y +PE + G ++ D +S GV L E+L G P
Sbjct: 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ V +A+DA + + IHRD++ N+LL + K+ADF + +
Sbjct: 178 YTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEG 227
Query: 192 RLHSTRVLGTFGYHAPEYAMT----GQLTQKSDVYSFGVVLLELLTGRKP 237
+ +GT Y +PE + G ++ D +S GV L E+L G P
Sbjct: 228 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 132 WMTRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAA 191
+ V +A+DA + + IHRD++ N+LL + K+ADF + +
Sbjct: 178 YTAEVVLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEG 227
Query: 192 RLHSTRVLGTFGYHAPEYAMT----GQLTQKSDVYSFGVVLLELLTGRKP 237
+ +GT Y +PE + G ++ D +S GV L E+L G P
Sbjct: 228 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + L GT Y
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTL-----CGTPEYL 226
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 226
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + L GT Y
Sbjct: 149 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 200
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 226
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + L GT Y
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 198
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + L GT Y
Sbjct: 147 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 198
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 83 HENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRVRIAVDA 142
H N++EL+ + E + L +E GS+ +H R+ + V+ D
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---------DV 120
Query: 143 ARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFK---AKIADFNLSN--QAPDMAARLHSTR 197
A L++LH K I HRD++ N+L + KI DF L + + + + +
Sbjct: 121 ASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 198 VL---GTFGYHAPEY--AMTGQLT---QKSDVYSFGVVLLELLTGRKP 237
+L G+ Y APE A + + + ++ D++S GV+L LL+G P
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 27/116 (23%)
Query: 145 GLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLS---NQAPDM------------ 189
G +++HE IIHRD++ +N LL +D KI DF L+ N D+
Sbjct: 143 GEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 190 --------AARLHSTRVLGTFGYHAPEYAMTGQ-LTQKSDVYSFGVVLLELLTGRK 236
+ T + T Y APE + + T D++S G + ELL K
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMK 255
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYL 206
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + L GT Y
Sbjct: 140 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-----CGTPEYL 191
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLAGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
APE ++ + D ++ GV++ E+ G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 83/189 (43%), Gaps = 42/189 (22%)
Query: 75 VSVVSRLKHENLVELLGYCVEGNLRVLAYEFATMGSLHDILH-GRKGVQGAQPGPVLDWM 133
+++++RL H+++V++L V+ + L+ +L + PV ++
Sbjct: 103 IAILNRLNHDHVVKVLDI-------VIPKDVEKFDELYVVLEIADSDFKKLFRTPV--YL 153
Query: 134 TRVRIAV---DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLS------- 183
T + I + G++Y+H I+HRD++ +N L+ +D K+ DF L+
Sbjct: 154 TELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE 210
Query: 184 ---NQAP--------DMAARLHSTRV-------LGTFGYHAPEYAMTGQ-LTQKSDVYSF 224
+Q P ++ H+ + + T Y APE + + T+ DV+S
Sbjct: 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270
Query: 225 GVVLLELLT 233
G + ELL
Sbjct: 271 GCIFAELLN 279
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+++ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 33/184 (17%)
Query: 67 YPDDEKQLVSVVSRLKHENLVELLGY--CVEGNLRVLAYEFATMGSLHDILHG------R 118
+ + E Q++ ++ L H N+V+L Y + R Y M + D LH R
Sbjct: 62 FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYR 121
Query: 119 KGVQGAQPGPVLDWMTRVRIAVDAARGLEYLHEKVQPSI--IHRDIRSSNVLLFE-DFKA 175
+ V P P+L + ++ R + LH PS+ HRDI+ NVL+ E D
Sbjct: 122 RQVA---PPPILIKVFLFQLI----RSIGCLH---LPSVNVCHRDIKPHNVLVNEADGTL 171
Query: 176 KIADFN----LSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ-LTQKSDVYSFGVVLLE 230
K+ DF LS P++A + + Y APE Q T D++S G + E
Sbjct: 172 KLCDFGSAKKLSPSEPNVA-------YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAE 224
Query: 231 LLTG 234
++ G
Sbjct: 225 MMLG 228
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 27/184 (14%)
Query: 78 VSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
VS+L H N+V + N + F GS D++ +D M +
Sbjct: 63 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTH----------FMDGMNEL 112
Query: 137 RIAV---DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF--NLSNQAPDMAA 191
IA + L+Y+H +HR +++S++L+ D K ++ NLS +
Sbjct: 113 AIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ 169
Query: 192 RL------HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRG 245
R+ +S +VL + + G KSD+YS G+ EL G P MP
Sbjct: 170 RVVHDFPKYSVKVLPWLSPEVLQQNLQG-YDAKSDIYSVGITACELANGHVPFK-DMPAT 227
Query: 246 QQSL 249
Q L
Sbjct: 228 QMLL 231
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 27/184 (14%)
Query: 78 VSRL-KHENLVELLGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPVLDWMTRV 136
VS+L H N+V + N + F GS D++ +D M +
Sbjct: 79 VSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTH----------FMDGMNEL 128
Query: 137 RIAV---DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADF--NLSNQAPDMAA 191
IA + L+Y+H +HR +++S++L+ D K ++ NLS +
Sbjct: 129 AIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ 185
Query: 192 RL------HSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRG 245
R+ +S +VL + + G KSD+YS G+ EL G P MP
Sbjct: 186 RVVHDFPKYSVKVLPWLSPEVLQQNLQG-YDAKSDIYSVGITACELANGHVPFK-DMPAT 243
Query: 246 QQSL 249
Q L
Sbjct: 244 QMLL 247
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+++ + ++ DF + + L GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL-----CGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ E+ G P P
Sbjct: 206 APEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 138 IAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARLH 194
I D +++LH +I HRD++ N+L +D K+ DF + + A +
Sbjct: 114 IMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP 170
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
T Y APE + + D++S GV++ LL G P
Sbjct: 171 CY----TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 138 IAVDAARGLEYLHEKVQPSIIHRDIRSSNVLLF---EDFKAKIADFNLSNQAPDMAARLH 194
I D +++LH +I HRD++ N+L +D K+ DF + + A +
Sbjct: 133 IMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP 189
Query: 195 STRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKP 237
T Y APE + + D++S GV++ LL G P
Sbjct: 190 CY----TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 146 LEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYH 205
EYLH +I+RD++ N+L+ + ++ DF + + + + + GT Y
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYL 205
Query: 206 APEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMP 243
APE ++ + D ++ GV++ ++ G P P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 141 DAARGLEYLHEKVQPSIIHRDIRSSNVLLFEDFKAKIADFNLSNQAPDMAARLHSTRVLG 200
D L +LH + ++H D++ +N+ L + K+ DF L + A G
Sbjct: 165 DTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA---GEVQEG 218
Query: 201 TFGYHAPEYAMTGQLTQKSDVYSFGVVLLEL 231
Y APE + G +DV+S G+ +LE+
Sbjct: 219 DPRYMAPEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 204
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 239
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 205
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 224
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 225 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 259
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 189
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 190 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 189
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 190 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 224
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 205
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 190
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 205
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 240
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 204
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 239
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 143 ARGLEYLHEKVQPSIIHRDIRSSNVLL-------------FEDFKAKIADFNLSNQ--AP 187
A G+ +LH IIHRD++ N+L+ E+ + I+DF L + +
Sbjct: 125 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 188 DMAARLHSTRVLGTFGYHAPEYAMTG-------QLTQKSDVYSFGVVLLELLT-GRKP 237
+ R + GT G+ APE +LT+ D++S G V +L+ G+ P
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 188
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 189 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 223
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 212
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 213 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 247
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 190
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 185
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 185
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 220
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 232
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 190
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 225
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 237
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 238 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 272
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 217
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 252
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 232
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 267
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 156 SIIHRDIRSSNVLL-FEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQ 214
++HRDI+ N+L+ + K+ DF D T GT Y PE+ +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHR 232
Query: 215 LTQKS-DVYSFGVVLLELLTGRKPVDH--TMPRGQ 246
+S V+S G++L +++ G P +H + RGQ
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 267
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,696,942
Number of Sequences: 62578
Number of extensions: 384206
Number of successful extensions: 3161
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 285
Number of HSP's that attempted gapping in prelim test: 1128
Number of HSP's gapped (non-prelim): 1102
length of query: 323
length of database: 14,973,337
effective HSP length: 99
effective length of query: 224
effective length of database: 8,778,115
effective search space: 1966297760
effective search space used: 1966297760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)