Your job contains 1 sequence.
>020643
MEEATGNHSISDERVKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISY
LEAKHLLLLNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQK
LTSVRVGGNAIEPVNPSANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKF
APASMDEDKTSRKERNALRKEKETLRQARQSTFMRELVNDLEGRPEEVREVVGVESRELT
RYKEMMEERARQEEELFTRAPLTKMEKKKMKHLKKSRNGLLGLTESFYDEIKSLPIEEKD
ERPTNVSNGSRGMGKLEKRKRKH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020643
(323 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026530 - symbol:AT1G07840 "AT1G07840" species... 738 4.6e-73 1
MGI|MGI:1916216 - symbol:Ngdn "neuroguidin, EIF4E binding... 293 6.6e-26 1
UNIPROTKB|Q2KII6 - symbol:NGDN "Neuroguidin" species:9913... 291 1.1e-25 1
UNIPROTKB|Q8NEJ9 - symbol:NGDN "Neuroguidin" species:9606... 287 2.9e-25 1
DICTYBASE|DDB_G0269972 - symbol:sas10 "U3 snoRNP protein"... 293 5.7e-25 1
ZFIN|ZDB-GENE-031030-13 - symbol:ngdn "neuroguidin, EIF4E... 258 3.4e-22 1
TAIR|locus:2044014 - symbol:EMB2777 "AT2G43650" species:3... 221 3.0e-17 1
UNIPROTKB|E2R6S8 - symbol:UTP3 "Uncharacterized protein" ... 215 6.7e-17 1
RGD|1308540 - symbol:Utp3 "UTP3, small subunit (SSU) proc... 213 1.1e-16 1
MGI|MGI:1919230 - symbol:Utp3 "UTP3, small subunit (SSU) ... 209 2.9e-16 1
ZFIN|ZDB-GENE-040912-163 - symbol:utp3 "UTP3, small subun... 203 7.9e-15 1
UNIPROTKB|Q9NQZ2 - symbol:UTP3 "Something about silencing... 201 2.1e-14 1
UNIPROTKB|I3LGD1 - symbol:UTP3 "Uncharacterized protein" ... 199 4.4e-14 1
UNIPROTKB|F1NWV5 - symbol:UTP3 "Uncharacterized protein" ... 189 8.3e-14 1
UNIPROTKB|F1MSF6 - symbol:UTP3 "Uncharacterized protein" ... 197 8.5e-14 1
POMBASE|SPAC18B11.06 - symbol:SPAC18B11.06 "U3 snoRNP-ass... 183 2.3e-12 1
FB|FBgn0029755 - symbol:Sas10 "Sas10" species:7227 "Droso... 180 1.3e-11 1
ASPGD|ASPL0000028911 - symbol:AN5340 species:162425 "Emer... 107 1.7e-08 2
WB|WBGene00003059 - symbol:lpd-2 species:6239 "Caenorhabd... 133 2.5e-06 1
ZFIN|ZDB-GENE-041024-8 - symbol:c1d "C1D nuclear receptor... 107 2.8e-05 1
CGD|CAL0005488 - symbol:orf19.7422 species:5476 "Candida ... 109 0.00026 2
UNIPROTKB|Q5A2Y9 - symbol:LCP5 "Likely U3 snoRNP complex ... 109 0.00026 2
>TAIR|locus:2026530 [details] [associations]
symbol:AT1G07840 "AT1G07840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0006606 "protein import into
nucleus" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
InterPro:IPR007146 Pfam:PF04000 KO:K14765 OMA:RINYEES EMBL:AY056325
EMBL:AY091190 EMBL:AK317128 IPI:IPI00541001 RefSeq:NP_563798.1
RefSeq:NP_973785.1 UniGene:At.14833 IntAct:Q93ZQ9 PRIDE:Q93ZQ9
EnsemblPlants:AT1G07840.1 EnsemblPlants:AT1G07840.2 GeneID:837299
KEGG:ath:AT1G07840 TAIR:At1g07840 HOGENOM:HOG000029110
InParanoid:Q93ZQ9 PhylomeDB:Q93ZQ9 ProtClustDB:CLSN2687720
ArrayExpress:Q93ZQ9 Genevestigator:Q93ZQ9 Uniprot:Q93ZQ9
Length = 312
Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
Identities = 162/310 (52%), Positives = 204/310 (65%)
Query: 15 VKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQS 74
VKKEAPQLA++LREMK LD +RSKV++L VK N++PT GISYLEAKHLLLL+YCQ
Sbjct: 13 VKKEAPQLASVLREMKNVLDVVRSKVEALTALVKANSFPTAGGISYLEAKHLLLLSYCQD 72
Query: 75 IVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIEPV 134
+VYY+LRKAKGLSI+GHP+V+SLVEIR+FLEKIRPID+KLQYQIQKLT+ GG E
Sbjct: 73 LVYYILRKAKGLSIDGHPLVRSLVEIRMFLEKIRPIDKKLQYQIQKLTTA--GGPVTELA 130
Query: 135 NPSANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDEDKTSRKE 194
+ S E QK+EDL Y+P PD+L K D +DG VY+PPKFAP SM EDKTS++E
Sbjct: 131 HSEGKGSCEAQKSEDLSNYKPKPDLLADKEDDQEDDG--VYRPPKFAPMSM-EDKTSKQE 187
Query: 195 RNALRKEKETLRQARQSTFMRELVNDLXXXXXXXXXXXXXXXXXLTRYKXXXXXXXXXXX 254
R+A RKEK RQA ++T+M+++++DL R+
Sbjct: 188 RDAARKEKHFFRQATENTYMKDVLDDLEDRPEEIRDYYGVESNEQKRFMAQYERQQKAEE 247
Query: 255 XLFTRAPLTXXXXXXXXXXXXSRNGLLGLTESFYDEIKSLPIEEKD-ERPTNVSNGSRGM 313
LFTRAP T S +GL LTE+FYD+IK L +KD E+P + RG
Sbjct: 248 ELFTRAPRTKEDKKREKRLKSS-SGLHELTENFYDDIKFL---DKDGEKPRSFGRNKRG- 302
Query: 314 GKLEKRKRKH 323
G +KRK +H
Sbjct: 303 GPFKKRKTRH 312
>MGI|MGI:1916216 [details] [associations]
symbol:Ngdn "neuroguidin, EIF4E binding protein"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] MGI:MGI:1916216 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0030424 GO:GO:0030425 GO:GO:0030175
InterPro:IPR007146 Pfam:PF04000 eggNOG:NOG134653 KO:K14765
CTD:25983 GeneTree:ENSGT00500000044922 HOGENOM:HOG000013129
HOVERGEN:HBG082025 OMA:RINYEES OrthoDB:EOG4V438J EMBL:AK005098
EMBL:BC023770 EMBL:BC052790 IPI:IPI00119201 RefSeq:NP_081166.1
UniGene:Mm.21214 STRING:Q9DB96 PhosphoSite:Q9DB96 PaxDb:Q9DB96
PRIDE:Q9DB96 Ensembl:ENSMUST00000022815 GeneID:68966 KEGG:mmu:68966
UCSC:uc007txx.2 InParanoid:Q9DB96 NextBio:328303 Bgee:Q9DB96
CleanEx:MM_NGDN Genevestigator:Q9DB96 GermOnline:ENSMUSG00000022204
Uniprot:Q9DB96
Length = 315
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 72/209 (34%), Positives = 112/209 (53%)
Query: 13 ERVKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYC 72
E ++ + LL+ ++E + + +++Q+L TKV+ Y T G+S+LE K LLL Y
Sbjct: 5 EVLESDVSSSITLLKNLQEQVMAVTAQIQALTTKVRAGTYSTEKGLSFLEVKDQLLLMYL 64
Query: 73 QSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIE 132
+ + +L KA G S++GHP V LVEIR LEK+RP+D+KL+YQI KL V G+ E
Sbjct: 65 MDLSHLILDKASGASLQGHPAVLRLVEIRTVLEKLRPLDQKLKYQIDKLVKTAVTGSLSE 124
Query: 133 --PVNPSANESGEPQK--TEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDED 188
P+ + S K +ED + + + + A Y PP+ P DE
Sbjct: 125 NDPLRFKPHPSNMVSKLSSEDEEESEAEEGQSEASGKKSAKGSAKKYVPPRLVPVHYDET 184
Query: 189 KTSRKERNALRKEKETLRQARQSTFMREL 217
+ R+++ L K K R+A S+ +REL
Sbjct: 185 EAEREQKR-LEKAK---RRALSSSVIREL 209
>UNIPROTKB|Q2KII6 [details] [associations]
symbol:NGDN "Neuroguidin" species:9913 "Bos taurus"
[GO:0030425 "dendrite" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030175 "filopodium" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0030424 GO:GO:0030425
GO:GO:0030175 InterPro:IPR007146 Pfam:PF04000 eggNOG:NOG134653
KO:K14765 EMBL:BC112624 IPI:IPI00697192 RefSeq:NP_001039924.1
UniGene:Bt.9759 STRING:Q2KII6 PRIDE:Q2KII6
Ensembl:ENSBTAT00000012628 GeneID:539602 KEGG:bta:539602 CTD:25983
GeneTree:ENSGT00500000044922 HOGENOM:HOG000013129
HOVERGEN:HBG082025 InParanoid:Q2KII6 OMA:RINYEES OrthoDB:EOG4V438J
NextBio:20878099 Uniprot:Q2KII6
Length = 315
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 75/209 (35%), Positives = 112/209 (53%)
Query: 13 ERVKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYC 72
E ++ + P ALL+ ++E + + ++VQ+L KV+ YPT G+S LE K LLL Y
Sbjct: 5 EVLESDLPNAVALLKNLQEQVMAVTAQVQTLTKKVQAKAYPTEKGLSLLEVKDQLLLMYL 64
Query: 73 QSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIE 132
+ + +L KA G S++GHP V LVEIR LEK+RP+D+KL+YQI KL V G+ E
Sbjct: 65 MDLSHLILDKASGGSLQGHPAVLRLVEIRTVLEKLRPLDQKLKYQIDKLVKTAVTGSLSE 124
Query: 133 --PVNPSANESGEPQK--TEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDED 188
P+ + S K +ED + + + + A Y PP+ P DE
Sbjct: 125 NDPLRFKPHPSNMMSKLSSEDEEEDEAEEGQSGASGKKSGKGTAKKYVPPRLVPVHYDET 184
Query: 189 KTSRKERNALRKEKETLRQARQSTFMREL 217
+ R E+ L + K R+A S+ +REL
Sbjct: 185 EAER-EKKRLERAK---RRALSSSVIREL 209
>UNIPROTKB|Q8NEJ9 [details] [associations]
symbol:NGDN "Neuroguidin" species:9606 "Homo sapiens"
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0030175 "filopodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0030424 GO:GO:0030425
GO:GO:0030175 EMBL:CH471078 InterPro:IPR007146 Pfam:PF04000
eggNOG:NOG134653 KO:K14765 CTD:25983 HOGENOM:HOG000013129
HOVERGEN:HBG082025 OMA:RINYEES EMBL:AK291875 EMBL:AL050003
EMBL:BC030817 IPI:IPI00000162 IPI:IPI00410360 PIR:T08694
RefSeq:NP_001036100.1 RefSeq:NP_056329.1 UniGene:Hs.9043
ProteinModelPortal:Q8NEJ9 STRING:Q8NEJ9 PhosphoSite:Q8NEJ9
DMDM:46395905 PaxDb:Q8NEJ9 PRIDE:Q8NEJ9 DNASU:25983
Ensembl:ENST00000397154 Ensembl:ENST00000408901 GeneID:25983
KEGG:hsa:25983 UCSC:uc001wjy.3 UCSC:uc001wjz.3
GeneCards:GC14P023924 HGNC:HGNC:20271 HPA:HPA000944 MIM:610777
neXtProt:NX_Q8NEJ9 PharmGKB:PA134957933 InParanoid:Q8NEJ9
GenomeRNAi:25983 NextBio:47646 ArrayExpress:Q8NEJ9 Bgee:Q8NEJ9
CleanEx:HS_NGDN Genevestigator:Q8NEJ9 GermOnline:ENSG00000129460
Uniprot:Q8NEJ9
Length = 315
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 72/207 (34%), Positives = 111/207 (53%)
Query: 15 VKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQS 74
++ + P LL+ ++E + + ++V+SL KV+ YPT G+S+LE K LLL Y
Sbjct: 7 LESDLPSAVTLLKNLQEQVMAVTAQVKSLTQKVQAGAYPTEKGLSFLEVKDQLLLMYLMD 66
Query: 75 IVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIE-- 132
+ + +L KA G S++GH V LVEIR LEK+RP+D+KL+YQI KL V G+ E
Sbjct: 67 LTHLILDKASGGSLQGHDAVLRLVEIRTVLEKLRPLDQKLKYQIDKLIKTAVTGSLSEND 126
Query: 133 PVNPSANESGEPQK--TEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDEDKT 190
P+ + S K +ED + D + + + + Y PP+ P DE +
Sbjct: 127 PLRFKPHPSNMMSKLSSEDEEEDEAEDDQSEASGKKSVKGVSKKYVPPRLVPVHYDETEA 186
Query: 191 SRKERNALRKEKETLRQARQSTFMREL 217
R E+ L + K R+A S+ +REL
Sbjct: 187 ER-EKKRLERAK---RRALSSSVIREL 209
>DICTYBASE|DDB_G0269972 [details] [associations]
symbol:sas10 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0030515 "snoRNA binding"
evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005732 "small nucleolar ribonucleoprotein complex"
evidence=ISS] InterPro:IPR018972 dictyBase:DDB_G0269972
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0030515
GO:GO:0006364 InterPro:IPR007146 Pfam:PF04000 GO:GO:0005732
eggNOG:NOG134653 KO:K14767 Pfam:PF09368 OMA:NENAWGS
RefSeq:XP_646440.1 EnsemblProtists:DDB0237495 GeneID:8617399
KEGG:ddi:DDB_G0269972 InParanoid:Q55CP1 ProtClustDB:CLSZ2846925
Uniprot:Q55CP1
Length = 687
Score = 293 (108.2 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 71/215 (33%), Positives = 121/215 (56%)
Query: 18 EAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQSIVY 77
E+P L LL + K ++++++ + + KVK N PT GIS+LE K+ LLL+YC +I Y
Sbjct: 223 ESPLLLDLLEDFKVKMNEVKTSILPALEKVKSNQLPTSKGISFLETKYQLLLSYCLNITY 282
Query: 78 YLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKL-----TSVRVGGNAIE 132
+L+ K+ G+SI+ HPV+ L++ R +EKI+P+D+KL+YQI KL T VG + +
Sbjct: 283 FLMLKSSGVSIKDHPVIDQLIKCRTMIEKIQPLDKKLKYQIDKLLKSANTGTLVGSSKDD 342
Query: 133 PVNPSANES---GEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPAS---MD 186
P+ N S G+ + ED + N + AGVY+ PK A +D
Sbjct: 343 PLQHRPNLSSMGGDDDEDEDDEQGLDND---YDDENSRIAQRAGVYQAPKLYGAKGGVID 399
Query: 187 -EDKTSRKERNALRKEKETLRQARQSTFMRELVND 220
ED ++K+ +R ++++++ + + + E+ D
Sbjct: 400 QEDAIAKKKSKEIRDKQKSIK-GKMAKEIEEIYGD 433
>ZFIN|ZDB-GENE-031030-13 [details] [associations]
symbol:ngdn "neuroguidin, EIF4E binding protein"
species:7955 "Danio rerio" [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] ZFIN:ZDB-GENE-031030-13 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 InterPro:IPR007146 Pfam:PF04000
eggNOG:NOG134653 KO:K14765 CTD:25983 HOGENOM:HOG000013129
HOVERGEN:HBG082025 OrthoDB:EOG4V438J EMBL:BC057531 IPI:IPI00486493
RefSeq:NP_938187.2 UniGene:Dr.77981 STRING:Q6PFJ1 PRIDE:Q6PFJ1
GeneID:386642 KEGG:dre:386642 InParanoid:Q6PFJ1 NextBio:20813970
ArrayExpress:Q6PFJ1 Uniprot:Q6PFJ1
Length = 315
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 70/212 (33%), Positives = 109/212 (51%)
Query: 9 SISDERVKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLL 68
++ ++ + ++ P LL + E + + S V+ LI KV+ Y T G+S+L+ ++ LL
Sbjct: 5 AVGNDVIDRDLPTAVRLLNSLTEQIVSVTSHVRELIKKVREKAYQTSKGLSFLDLRYHLL 64
Query: 69 LNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGG 128
L Y Q I + + K +G S++ + + LV IR LEK+RP+D+KL+YQI KL V G
Sbjct: 65 LFYLQDITHLISLKTEGESLKDNSAIHRLVTIRTVLEKMRPLDQKLKYQIDKLVRTAVTG 124
Query: 129 NAIEPVNPSANESGEPQKTEDLLKYRPNPDM--LVSKTDMTTEDGAGV-YKPPKFAPASM 185
+ E N + PQ L + D + KT E G Y PP+ AP
Sbjct: 125 SLSE--NDPLHFRPNPQSLVSKLSESEDSDDDGVGGKTKEQKEPSGGRRYVPPRIAPMHY 182
Query: 186 DEDKTSRKERNALRKEKETLRQARQSTFMREL 217
D D T +R R EK+ R A +S+ ++EL
Sbjct: 183 DGDLTEA-DRQKERVEKQK-RAALRSSVIQEL 212
>TAIR|locus:2044014 [details] [associations]
symbol:EMB2777 "AT2G43650" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0016458 "gene silencing"
evidence=IEA] InterPro:IPR018972 EMBL:CP002685 GO:GO:0003676
GO:GO:0030529 InterPro:IPR007146 Pfam:PF04000 KO:K14767 OMA:KGWSEVE
Pfam:PF09368 EMBL:AY099689 EMBL:AY128870 IPI:IPI00548722
RefSeq:NP_850397.1 UniGene:At.36866 IntAct:Q8L3P4 PRIDE:Q8L3P4
EnsemblPlants:AT2G43650.1 GeneID:818967 KEGG:ath:AT2G43650
TAIR:At2g43650 HOGENOM:HOG000029895 InParanoid:Q8L3P4
PhylomeDB:Q8L3P4 ProtClustDB:CLSN2680230 Genevestigator:Q8L3P4
Uniprot:Q8L3P4
Length = 654
Score = 221 (82.9 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 45/121 (37%), Positives = 76/121 (62%)
Query: 15 VKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGIS-YLEAKHLLLLNYCQ 73
V AP++ LL E+ + +++L SK+ ++ K+K +++G++ YLE K LLLL YCQ
Sbjct: 232 VYSSAPEIVGLLSELNDAVEELESKINPVMNKLKEGEI-SLNGLARYLEVKQLLLLTYCQ 290
Query: 74 SIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIEP 133
SI +YLL K++G I HPV+ LVEI+ L+KI+ +D +L ++ + + A++
Sbjct: 291 SITFYLLLKSEGQPIRDHPVLARLVEIKSLLDKIKELDEELPPGFEESLARSIANGAVQK 350
Query: 134 V 134
V
Sbjct: 351 V 351
>UNIPROTKB|E2R6S8 [details] [associations]
symbol:UTP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007420 "brain development" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR018972
GO:GO:0007420 GO:GO:0005730 InterPro:IPR007146 Pfam:PF04000
GeneTree:ENSGT00500000044947 KO:K14767 OMA:KGWSEVE Pfam:PF09368
CTD:57050 EMBL:AAEX03009135 RefSeq:XP_532399.2
Ensembl:ENSCAFT00000004662 GeneID:475167 KEGG:cfa:475167
NextBio:20851051 Uniprot:E2R6S8
Length = 476
Score = 215 (80.7 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 49/188 (26%), Positives = 98/188 (52%)
Query: 15 VKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQS 74
++KE+P+L L+ ++K L +++ +++ L+ V+ P G YL K+ L LNYC +
Sbjct: 216 LRKESPELLELIEDLKLKLTEVKDELEPLLQLVEQGIIPPGKGSQYLRTKYNLYLNYCAN 275
Query: 75 IVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIEPV 134
I +YL+ KA+ + GHPV++ LV R + K+ +D+KL +I+ L +++ EP+
Sbjct: 276 ISFYLILKARRVPAHGHPVIERLVTYRNLINKLSVVDQKLSSEIRHLLTLKGDAGNKEPI 335
Query: 135 NPSANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDEDKTSRK- 193
+ + +P+ + P + TD++ + K+ D+ K RK
Sbjct: 336 SKAKFTKAKPKSVSE------TPAAASAVTDVSDDSDFDEEAARKYYKEIEDQQKLKRKK 389
Query: 194 ERNALRKE 201
E +++ ++
Sbjct: 390 EEDSIEEQ 397
>RGD|1308540 [details] [associations]
symbol:Utp3 "UTP3, small subunit (SSU) processome component,
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0007420 "brain development" evidence=ISO;ISS] [GO:0016568
"chromatin modification" evidence=IEA] InterPro:IPR018972
RGD:1308540 GO:GO:0005634 GO:GO:0007420 GO:GO:0005730 GO:GO:0016568
InterPro:IPR007146 Pfam:PF04000 eggNOG:NOG275811
GeneTree:ENSGT00500000044947 KO:K14767 OMA:KGWSEVE Pfam:PF09368
CTD:57050 HOGENOM:HOG000047611 HOVERGEN:HBG074329 OrthoDB:EOG466VMH
EMBL:BC079277 IPI:IPI00204100 RefSeq:NP_001012036.1
UniGene:Rn.23516 STRING:Q6AXX4 PRIDE:Q6AXX4
Ensembl:ENSRNOT00000004787 GeneID:305258 KEGG:rno:305258
UCSC:RGD:1308540 InParanoid:Q6AXX4 NextBio:654282
Genevestigator:Q6AXX4 GermOnline:ENSRNOG00000003599 Uniprot:Q6AXX4
Length = 470
Score = 213 (80.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 55/189 (29%), Positives = 99/189 (52%)
Query: 15 VKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQS 74
++KE+P+L L+ ++K L +++ +++ LI V+ P G YL+ K+ L LNYC +
Sbjct: 215 LRKESPELLELIEDLKVKLTEVKDELEPLIQLVEKGVIPPGKGSQYLKTKYNLYLNYCAN 274
Query: 75 IVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIEPV 134
I +YL+ KA+ + GHPV++ LV R + K+ +D+KL +I+ L + + G + +
Sbjct: 275 ISFYLILKARRVPAHGHPVIERLVTYRNLINKLSVVDQKLSSEIRHLLTAKEGAGK-KDL 333
Query: 135 NPSANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGV--YKPPKFAPASMDEDKTSR 192
NP A + KT+ K D+ T+ D A + YK + P + + +
Sbjct: 334 NPKAKLT----KTKP--KSAKQTDVNADLTEEPEFDEAALEFYKEMEDRPELKRKKEENS 387
Query: 193 KERNALRKE 201
E AL ++
Sbjct: 388 AEEQALEEQ 396
>MGI|MGI:1919230 [details] [associations]
symbol:Utp3 "UTP3, small subunit (SSU) processome component,
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IPI]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007420 "brain development" evidence=IDA] [GO:0016568
"chromatin modification" evidence=IEA] InterPro:IPR018972
MGI:MGI:1919230 GO:GO:0005634 GO:GO:0007420 GO:GO:0005730
GO:GO:0016568 InterPro:IPR007146 Pfam:PF04000 eggNOG:NOG275811
GeneTree:ENSGT00500000044947 KO:K14767 OMA:KGWSEVE Pfam:PF09368
CTD:57050 HOGENOM:HOG000047611 HOVERGEN:HBG074329 OrthoDB:EOG466VMH
EMBL:AF155362 EMBL:AF271213 EMBL:AK010316 EMBL:AK145637
EMBL:BC022994 IPI:IPI00119776 IPI:IPI00551192 RefSeq:NP_075541.1
UniGene:Mm.490364 ProteinModelPortal:Q9JI13 IntAct:Q9JI13
STRING:Q9JI13 PhosphoSite:Q9JI13 PaxDb:Q9JI13 PRIDE:Q9JI13
Ensembl:ENSMUST00000090413 GeneID:65961 KEGG:mmu:65961
UCSC:uc008xzv.1 InParanoid:Q9JI13 NextBio:320384 Bgee:Q9JI13
Genevestigator:Q9JI13 GermOnline:ENSMUSG00000070697 Uniprot:Q9JI13
Length = 469
Score = 209 (78.6 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 57/198 (28%), Positives = 104/198 (52%)
Query: 15 VKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQS 74
+KKE+P+L L+ +++ L +++ +++ L+ V+ PT G YL+ K+ L LNYC +
Sbjct: 215 LKKESPELLELIEDLQAKLTEVKDELEPLLQLVEKGVIPTGRGSEYLKTKYNLYLNYCAN 274
Query: 75 IVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIEPV 134
I +YL+ KA+ + GHPV++ LV R + K+ +D+KL +I+ L + + G E +
Sbjct: 275 ISFYLILKARRVPAHGHPVIERLVTYRNLINKLSVVDQKLSSEIRHLLTAKDGAVKKE-M 333
Query: 135 NPSANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDEDKTSRK- 193
P A + K+ +K V+ TD DGA + K+ D + RK
Sbjct: 334 TPKAKLTKTKPKS---VKQAA----AVALTDEPDFDGAAL----KYYKEMEDRQELKRKK 382
Query: 194 ERNALRKEKETLRQARQS 211
E N+ ++ + A+++
Sbjct: 383 EENSAEEQALEEQNAKRA 400
>ZFIN|ZDB-GENE-040912-163 [details] [associations]
symbol:utp3 "UTP3, small subunit (SSU) processome
component, homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR018972
ZFIN:ZDB-GENE-040912-163 InterPro:IPR007146 Pfam:PF04000
eggNOG:NOG275811 GeneTree:ENSGT00500000044947 KO:K14767
Pfam:PF09368 CTD:57050 HOGENOM:HOG000047611 HOVERGEN:HBG074329
OrthoDB:EOG466VMH EMBL:BX005135 EMBL:BC081603 IPI:IPI00511638
RefSeq:NP_001004595.1 UniGene:Dr.82218 STRING:Q66I02
Ensembl:ENSDART00000079255 GeneID:447856 KEGG:dre:447856
InParanoid:Q66I02 OMA:TYEMAKN NextBio:20832377 Uniprot:Q66I02
Length = 470
Score = 203 (76.5 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 40/109 (36%), Positives = 66/109 (60%)
Query: 15 VKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQS 74
+KKE+P+L L+++ K L +LR +VQ L+ VK P G +Y+ K L LNYC +
Sbjct: 216 LKKESPELLELIQDFKAKLTELRDEVQPLVKMVKNGRIPPGKGANYIITKQQLYLNYCTN 275
Query: 75 IVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTS 123
I +YL+ KAK + HPV++ L+ R + ++ +D +L Q+++L S
Sbjct: 276 ISFYLVLKAKRIPAHNHPVIERLLTYRNLINELGAVDARLAPQLRQLLS 324
>UNIPROTKB|Q9NQZ2 [details] [associations]
symbol:UTP3 "Something about silencing protein 10"
species:9606 "Homo sapiens" [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0007420
"brain development" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR018972 GO:GO:0007420 GO:GO:0005730 GO:GO:0016568
InterPro:IPR007146 Pfam:PF04000 eggNOG:NOG275811 KO:K14767
OMA:KGWSEVE Pfam:PF09368 EMBL:AF271212 EMBL:AL136590 EMBL:CR533544
EMBL:AK026909 EMBL:BC004546 IPI:IPI00006900 RefSeq:NP_065101.1
UniGene:Hs.322901 ProteinModelPortal:Q9NQZ2 IntAct:Q9NQZ2
MINT:MINT-1410460 STRING:Q9NQZ2 PhosphoSite:Q9NQZ2 DMDM:76364208
PaxDb:Q9NQZ2 PeptideAtlas:Q9NQZ2 PRIDE:Q9NQZ2 DNASU:57050
Ensembl:ENST00000254803 GeneID:57050 KEGG:hsa:57050 UCSC:uc003hfo.3
CTD:57050 GeneCards:GC04P071554 HGNC:HGNC:24477 HPA:HPA035655
MIM:611614 neXtProt:NX_Q9NQZ2 PharmGKB:PA162408779
HOGENOM:HOG000047611 HOVERGEN:HBG074329 InParanoid:Q9NQZ2
OrthoDB:EOG466VMH PhylomeDB:Q9NQZ2 ChiTaRS:UTP3 GenomeRNAi:57050
NextBio:62816 Bgee:Q9NQZ2 CleanEx:HS_UTP3 Genevestigator:Q9NQZ2
GermOnline:ENSG00000132467 Uniprot:Q9NQZ2
Length = 479
Score = 201 (75.8 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 53/188 (28%), Positives = 98/188 (52%)
Query: 15 VKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQS 74
++KE+P+L L+ ++K L +++ +++ L+ V+ P G YL K+ L LNYC +
Sbjct: 219 LRKESPELLELIEDLKVKLTEVKDELEPLLELVEQGIIPPGKGSQYLRTKYNLYLNYCSN 278
Query: 75 IVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIEPV 134
I +YL+ KA+ + GHPV++ LV R + K+ +D+KL +I+ L +++ E +
Sbjct: 279 ISFYLILKARRVPAHGHPVIERLVTYRNLINKLSVVDQKLSSEIRHLLTLKDDAVKKELI 338
Query: 135 NPSANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDEDKTSRK- 193
P A +S +P K + + K + TD++ + K+ D K RK
Sbjct: 339 -PKA-KSTKP-KPKSVSK---TSAAACAVTDLSDDSDFDEKAKLKYYKEIEDRQKLKRKK 392
Query: 194 ERNALRKE 201
E N+ ++
Sbjct: 393 EENSTEEQ 400
>UNIPROTKB|I3LGD1 [details] [associations]
symbol:UTP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007420 "brain development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR018972 GO:GO:0007420
GO:GO:0005730 InterPro:IPR007146 Pfam:PF04000
GeneTree:ENSGT00500000044947 OMA:KGWSEVE Pfam:PF09368 EMBL:FP325194
EMBL:CU928399 Ensembl:ENSSSCT00000030261 Uniprot:I3LGD1
Length = 474
Score = 199 (75.1 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 40/135 (29%), Positives = 75/135 (55%)
Query: 15 VKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQS 74
++KE+P+L L+ ++K L +++ +++ L+ V+ P G YL K+ L LNYC +
Sbjct: 216 LRKESPELLELIDDLKVKLTEMKDELEPLLQLVEQRVIPPGKGSQYLRTKYNLYLNYCSN 275
Query: 75 IVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIEPV 134
I +YL+ KA+ + GHPV++ LV R + K+ +D KL +I+ L +++ G E
Sbjct: 276 ISFYLILKARRVPAHGHPVIERLVTYRNLINKLSVVDEKLSSEIRHLLTLKDGAGKKELT 335
Query: 135 NPSANESGEPQKTED 149
+ +P+ +
Sbjct: 336 LKVKSTKAKPKSVSE 350
>UNIPROTKB|F1NWV5 [details] [associations]
symbol:UTP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] InterPro:IPR018972 GO:GO:0005730
InterPro:IPR007146 Pfam:PF04000 GeneTree:ENSGT00500000044947
Pfam:PF09368 EMBL:AADN02009152 IPI:IPI00574177
Ensembl:ENSGALT00000018842 OMA:CVNISFY Uniprot:F1NWV5
Length = 273
Score = 189 (71.6 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 36/107 (33%), Positives = 64/107 (59%)
Query: 15 VKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQS 74
+K+E+P+L L+ + + L +L+ ++ L+ VK P G YL+ K+ L LNYC +
Sbjct: 2 LKQESPELLQLIEDFEVKLMELKDELHPLLQMVKNGTIPQGKGSRYLQTKYQLYLNYCAN 61
Query: 75 IVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKL 121
I +YL+ K+K + + HP+++ LV R + + ID+KL Q++ L
Sbjct: 62 ISFYLVLKSKRMPVHSHPIIERLVAYRNIINDLAVIDQKLSSQVRLL 108
>UNIPROTKB|F1MSF6 [details] [associations]
symbol:UTP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007420 "brain development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR018972 GO:GO:0007420
GO:GO:0005730 InterPro:IPR007146 Pfam:PF04000
GeneTree:ENSGT00500000044947 KO:K14767 OMA:KGWSEVE Pfam:PF09368
CTD:57050 EMBL:DAAA02018022 IPI:IPI01002913 RefSeq:XP_002688386.1
UniGene:Bt.98795 Ensembl:ENSBTAT00000012263 GeneID:521106
KEGG:bta:521106 NextBio:20873243 Uniprot:F1MSF6
Length = 474
Score = 197 (74.4 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 41/136 (30%), Positives = 78/136 (57%)
Query: 15 VKKEAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQS 74
++KE+P+L L+ ++K L +++ +++ L+ V+ P G YL K+ L LNYC +
Sbjct: 214 LRKESPELLELIDDLKVKLTEMKDELEPLLQLVEQKIIPPGKGSQYLRTKYNLYLNYCSN 273
Query: 75 IVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIEPV 134
I +YL+ KA+ + GHPV++ LV R + K+ +D+KL +I+ + +++ G E +
Sbjct: 274 ISFYLILKARRVPAHGHPVIERLVTYRNLINKLSVVDQKLSSEIRYMLTLKDGAGKKE-L 332
Query: 135 NPSANE-SGEPQKTED 149
N A +P+ +
Sbjct: 333 NLKAKSMKAKPKSVSE 348
>POMBASE|SPAC18B11.06 [details] [associations]
symbol:SPAC18B11.06 "U3 snoRNP-associated protein Lcp5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=NAS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISO] PomBase:SPAC18B11.06 EMBL:CU329670
GO:GO:0005730 GO:GO:0003723 GO:GO:0006364 InterPro:IPR007146
Pfam:PF04000 GO:GO:0005732 eggNOG:NOG134653 KO:K14765 OMA:LQSMEEY
OrthoDB:EOG4936T3 PIR:T37908 RefSeq:NP_592877.1
EnsemblFungi:SPAC18B11.06.1 GeneID:2542587 KEGG:spo:SPAC18B11.06
NextBio:20803637 Uniprot:Q09713
Length = 327
Score = 183 (69.5 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 46/169 (27%), Positives = 85/169 (50%)
Query: 33 LDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQSIVYYLLRKAKGLSIEGHP 92
+D L +Q+ + + + + DG+S + K LLL+Y Q + + +L K S H
Sbjct: 1 MDVLNKSIQTALEALPKTSSSSSDGVSLVSLKCQLLLSYVQKLAFLMLVKLDDESFLQHQ 60
Query: 93 -VVQSLVEIRLFLEKIRPIDRKLQYQIQKLTSVRVGGNAIEPVNPSANESGEPQKTEDLL 151
VV+ LV++R+ +EKIRP++ ++QY + KL I + N +G + ++D L
Sbjct: 61 DVVEKLVQLRIEIEKIRPLENRIQYSVDKLLRAAGRKEEIGSIKEPEN-NGNDKDSQDSL 119
Query: 152 K--YRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDEDKTSRKERNAL 198
K Y+PN +D + V + K + +S DE++ R ++ +
Sbjct: 120 KLHYKPNLSEFADDSDGPASENNVVKEDDKSSISSEDEEEELRSAKDGI 168
>FB|FBgn0029755 [details] [associations]
symbol:Sas10 "Sas10" species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR018972
GO:GO:0005634 GO:GO:0022008 EMBL:AE014298 GO:GO:0016568
GO:GO:0003723 InterPro:IPR007146 Pfam:PF04000 UniGene:Dm.2995
EMBL:AY047575 RefSeq:NP_572215.1 IntAct:Q9I7W5 STRING:Q9I7W5
PaxDb:Q9I7W5 EnsemblMetazoa:FBtr0070751 GeneID:31447
KEGG:dme:Dmel_CG4202 UCSC:CG4202-RA CTD:31447 FlyBase:FBgn0029755
eggNOG:NOG275811 GeneTree:ENSGT00500000044947 InParanoid:Q9I7W5
KO:K14767 OMA:KGWSEVE OrthoDB:EOG4V15H0 PhylomeDB:Q9I7W5
GenomeRNAi:31447 NextBio:773689 Bgee:Q9I7W5 GermOnline:CG4202
Pfam:PF09368 Uniprot:Q9I7W5
Length = 428
Score = 180 (68.4 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 40/182 (21%), Positives = 91/182 (50%)
Query: 18 EAPQLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQSIVY 77
E+P+ L ++ ++ LD++++ ++ ++ V+ ++ P V + Y H +L YC ++ +
Sbjct: 182 ESPEFIILTQDFQQHLDEVKNLLKPVLNYVRKHDVPMVPALQYAGLCHTVLTTYCSNVAF 241
Query: 78 YLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRP-IDRKLQYQIQKLTSVRVGGNAIEPVNP 136
YLL KA+ + ++ HPV++ LV+++ +E+++P + ++ Q++ L G+A ++
Sbjct: 242 YLLLKARRIDVKAHPVIRRLVQLKDLIEELKPRYEEYIRPQLEALLERIEDGDAFTVLDV 301
Query: 137 SANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDEDKTSRKERN 196
+ ++ K + L KY VS D +D K E++ R
Sbjct: 302 AQRKA----KLQILNKYNDGQQASVSSDDDDNDDDDDAESKEKDLQEEAGEEEEEEDARR 357
Query: 197 AL 198
+
Sbjct: 358 GI 359
>ASPGD|ASPL0000028911 [details] [associations]
symbol:AN5340 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] GO:GO:0003676
EMBL:BN001305 GO:GO:0030529 InterPro:IPR007146 Pfam:PF04000
EMBL:AACD01000093 eggNOG:NOG134653 KO:K14765 OMA:LQSMEEY
OrthoDB:EOG4936T3 RefSeq:XP_662944.1 STRING:Q5B290
EnsemblFungi:CADANIAT00003755 GeneID:2871634 KEGG:ani:AN5340.2
HOGENOM:HOG000216720 Uniprot:Q5B290
Length = 390
Score = 107 (42.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 35/111 (31%), Positives = 61/111 (54%)
Query: 53 PTVDGISYLEAKHLLLLNYCQSIVYYLLRKAKGL--------------SIEGHPVVQSLV 98
P DGIS L+ K LLL+Y Q++V+ ++ + + L SI V LV
Sbjct: 54 PPQDGISLLDTKCELLLSYLQNLVFLMILQLRELPSNDAADEKGDDSQSIRAQ-VTSKLV 112
Query: 99 EIRLFLEK-IRPIDRKLQYQIQKLTSVRVGGNAIEPVNPSANESGEPQKTE 148
E+R +L++ +RP++ +L+YQ+ K+ V+ A E S+ ++ +P K+E
Sbjct: 113 ELRTYLDRGVRPLEGRLKYQVDKV--VKAAEEA-ERAEKSS-QATKPSKSE 159
Score = 90 (36.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 32/96 (33%), Positives = 45/96 (46%)
Query: 135 NPSANESGEPQKTEDL--LKYRPN---------PDMLVSKTDMTTEDGAGVYKPPKFAPA 183
N S+ E + ++ ED+ + YRPN P+ KT T G+Y+PPK P
Sbjct: 173 NSSSEEGSDSEEDEDIDEMAYRPNVSAFSKKMVPEAKADKTARKTSSD-GIYRPPKIMPT 231
Query: 184 SMDEDKTSRKERNALRKEKETLRQARQSTFMRELVN 219
+M T RKER KE R R+S + E V+
Sbjct: 232 AMPT--TERKER----KE----RPIRRSNVIDEFVS 257
>WB|WBGene00003059 [details] [associations]
symbol:lpd-2 species:6239 "Caenorhabditis elegans"
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006629 "lipid metabolic process" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 InterPro:IPR007146 Pfam:PF04000 eggNOG:NOG134653
KO:K14765 GeneTree:ENSGT00500000044922 EMBL:FO080501
RefSeq:NP_491806.2 ProteinModelPortal:Q8IG68 STRING:Q8IG68
PaxDb:Q8IG68 EnsemblMetazoa:C48E7.3 GeneID:172320
KEGG:cel:CELE_C48E7.3 UCSC:C48E7.3 CTD:172320 WormBase:C48E7.3
HOGENOM:HOG000019755 InParanoid:Q8IG68 OMA:KYVAPRI NextBio:875011
Uniprot:Q8IG68
Length = 318
Score = 133 (51.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 37/164 (22%), Positives = 82/164 (50%)
Query: 56 DGISYLEAKHLLLLNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPIDRKLQ 115
+G+S L+ K+ + Y + + + KG SI P V+ ++ R+F+EK++P++ K++
Sbjct: 42 EGLSLLKLKNYEMTAYLGELTVLMSKMMKGESITVEPSVKRALKHRVFIEKMKPVEDKMK 101
Query: 116 YQIQKLTSVRVGGNAIEPVNPSANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVY 175
QI+KL +G ++ E + + G + D + + + + D E+G G
Sbjct: 102 PQIEKL----LGRSSAESGASNGSSKGNHRVRLDNMDVEGDEEE--EEEDEDDEEGKGAK 155
Query: 176 KPPKFAPASMDEDKTSRKERNALRKEKETLRQARQSTFMRELVN 219
+ K+ + + ++ +++++ R+A QS+ + EL N
Sbjct: 156 EVKKYVAPRIRAVRYEEEDEAPNKQQEKAKRRAMQSSLIMELKN 199
>ZFIN|ZDB-GENE-041024-8 [details] [associations]
symbol:c1d "C1D nuclear receptor co-repressor"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] ZFIN:ZDB-GENE-041024-8 GO:GO:0005737 GO:GO:0005730
GO:GO:0003677 GO:GO:0003723 GO:GO:0006364 CTD:10438
eggNOG:NOG278654 HOGENOM:HOG000007644 HOVERGEN:HBG097935 KO:K12592
OrthoDB:EOG4PNXJ7 InterPro:IPR011082 InterPro:IPR007146
PANTHER:PTHR15341 Pfam:PF04000 EMBL:BC083407 IPI:IPI00502133
RefSeq:NP_001007060.1 UniGene:Dr.37643 STRING:Q5XJ97 GeneID:474329
KEGG:dre:474329 InParanoid:Q5XJ97 NextBio:20850395
ArrayExpress:Q5XJ97 Uniprot:Q5XJ97
Length = 148
Score = 107 (42.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 32/141 (22%), Positives = 71/141 (50%)
Query: 10 ISDERVKKEAP-QLAALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLL 68
++D+ ++ P ++ L + L +++ VQ+L++ + + +D + +AK L+
Sbjct: 1 MADDAAVEDYPTEIEDNLNDFDSSLSSVQNMVQTLVSVSRSDRLLKLDPLE--QAKLDLM 58
Query: 69 LNYCQSIVYYLLRKAKGLSIEGHPVVQSLVEIRLFLEKIRPI-DRKLQYQIQKLTSVRVG 127
Y + ++++ +G++ + HP+ Q L IR ++ K++ I DR+ I K + R
Sbjct: 59 SAYALNSMFWMYLVTQGVNPKDHPIKQELERIRTYMNKVKEITDRRKAAHIDKEAASRFV 118
Query: 128 GNAIEPVNPSANESGEPQKTE 148
NA+ A++ KTE
Sbjct: 119 RNALW----DADDKKRKDKTE 135
>CGD|CAL0005488 [details] [associations]
symbol:orf19.7422 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] CGD:CAL0005488
EMBL:AACQ01000074 InterPro:IPR007146 Pfam:PF04000 eggNOG:NOG134653
KO:K14765 RefSeq:XP_716087.1 STRING:Q5A2Y9 GeneID:3642258
KEGG:cal:CaO19.7422 Uniprot:Q5A2Y9
Length = 390
Score = 109 (43.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 45/195 (23%), Positives = 89/195 (45%)
Query: 24 ALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQSIVYYLLRKA 83
A ++E+ + S+ L+ + + +++G+S L K+ L++Y +IV +L
Sbjct: 61 ASVKELIAFVKDSSSQHPELVRNLLAKSNSSLEGVSLLGLKNESLVSYINNIVLVVLSHL 120
Query: 84 KGLSIE---GHPVVQSLVEIRLFLEK-IRPIDRKLQYQIQKLTSV--RVGGNAIEPVNPS 137
+ L + G V+ + R+ LEK ++P+++KL YQ+ K+ R+ + I+
Sbjct: 121 ERLESDSETGSSAVERSIIQRVTLEKGVKPLEKKLSYQLDKMIRAYGRMEQDEIK-AEQK 179
Query: 138 ANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDEDKT-SRKERN 196
N+ G + E+ S+ D +ED Y+P + A + KT S+ +
Sbjct: 180 LNDRGSGENDENDENDSEEDSEEDSEDD--SEDDELAYRPDASSFAKLTSAKTKSKPTSS 237
Query: 197 ALRKEKETLRQARQS 211
A+ E R + S
Sbjct: 238 AVSTSNEKYRPPKIS 252
Score = 47 (21.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 276 SRNGLLGLTESFYDEIKSLPIEEKDERPTNVSNGSRGMGKLEKRKRK 322
S+N L E + E +P+ E T V +G G+ RK++
Sbjct: 272 SKNRKLQSMEEYLQEQSDMPMVEASVGSTIVEHGRGGVKTQHDRKKE 318
>UNIPROTKB|Q5A2Y9 [details] [associations]
symbol:LCP5 "Likely U3 snoRNP complex component LCP5p"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] CGD:CAL0005488 EMBL:AACQ01000074
InterPro:IPR007146 Pfam:PF04000 eggNOG:NOG134653 KO:K14765
RefSeq:XP_716087.1 STRING:Q5A2Y9 GeneID:3642258 KEGG:cal:CaO19.7422
Uniprot:Q5A2Y9
Length = 390
Score = 109 (43.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 45/195 (23%), Positives = 89/195 (45%)
Query: 24 ALLREMKEGLDKLRSKVQSLITKVKGNNYPTVDGISYLEAKHLLLLNYCQSIVYYLLRKA 83
A ++E+ + S+ L+ + + +++G+S L K+ L++Y +IV +L
Sbjct: 61 ASVKELIAFVKDSSSQHPELVRNLLAKSNSSLEGVSLLGLKNESLVSYINNIVLVVLSHL 120
Query: 84 KGLSIE---GHPVVQSLVEIRLFLEK-IRPIDRKLQYQIQKLTSV--RVGGNAIEPVNPS 137
+ L + G V+ + R+ LEK ++P+++KL YQ+ K+ R+ + I+
Sbjct: 121 ERLESDSETGSSAVERSIIQRVTLEKGVKPLEKKLSYQLDKMIRAYGRMEQDEIK-AEQK 179
Query: 138 ANESGEPQKTEDLLKYRPNPDMLVSKTDMTTEDGAGVYKPPKFAPASMDEDKT-SRKERN 196
N+ G + E+ S+ D +ED Y+P + A + KT S+ +
Sbjct: 180 LNDRGSGENDENDENDSEEDSEEDSEDD--SEDDELAYRPDASSFAKLTSAKTKSKPTSS 237
Query: 197 ALRKEKETLRQARQS 211
A+ E R + S
Sbjct: 238 AVSTSNEKYRPPKIS 252
Score = 47 (21.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 276 SRNGLLGLTESFYDEIKSLPIEEKDERPTNVSNGSRGMGKLEKRKRK 322
S+N L E + E +P+ E T V +G G+ RK++
Sbjct: 272 SKNRKLQSMEEYLQEQSDMPMVEASVGSTIVEHGRGGVKTQHDRKKE 318
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.132 0.359 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 323 282 0.00083 115 3 11 23 0.44 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 567 (60 KB)
Total size of DFA: 164 KB (2098 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.99u 0.10s 28.09t Elapsed: 00:00:03
Total cpu time: 28.00u 0.10s 28.10t Elapsed: 00:00:03
Start: Mon May 20 15:15:56 2013 End: Mon May 20 15:15:59 2013