Query 020643
Match_columns 323
No_of_seqs 188 out of 325
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 06:03:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020643.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020643hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2elba1 a.238.1.1 (A:6-273) DC 27.7 65 0.0048 26.1 7.0 33 16-48 8-40 (268)
2 d1ud0a_ a.8.4.1 (A:) DnaK {Rat 17.4 73 0.0053 21.8 4.3 25 25-49 52-76 (84)
3 d1st6a4 a.24.9.1 (A:372-488) V 9.5 1.6E+02 0.012 22.0 4.3 28 17-44 83-110 (117)
4 d1sumb_ a.7.12.1 (B:) PhoU hom 8.7 1.9E+02 0.014 22.5 4.9 75 16-90 137-214 (225)
5 d1st6a3 a.24.9.1 (A:253-371) V 8.0 1.6E+02 0.012 21.9 3.8 25 18-42 93-117 (119)
6 d2cbia1 a.246.1.1 (A:496-624) 7.8 76 0.0055 24.0 1.7 16 18-33 2-17 (129)
7 d1chua1 a.7.3.1 (A:423-533) L- 7.6 3.1E+02 0.022 19.3 5.3 21 58-78 63-83 (111)
8 d1fioa_ a.47.2.1 (A:) Sso1 {Ba 7.4 3.9E+02 0.028 19.4 6.1 60 18-77 3-63 (196)
9 d2f1ka1 a.100.1.12 (A:166-279) 5.9 2.8E+02 0.02 19.7 4.2 27 14-40 64-90 (114)
10 d1neka1 a.7.3.1 (A:451-588) Su 5.9 4.9E+02 0.036 18.8 7.2 21 58-78 61-81 (138)
No 1
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.73 E-value=65 Score=26.11 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=28.8
Q ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 020643 16 KKEAPQLAALLREMKEGLDKLRSKVQSLITKVK 48 (323)
Q Consensus 16 ~kesPEl~~LL~el~~~l~~v~~~v~~l~~~vk 48 (323)
-.|||.|-+.|..+...+..+...+..++...+
T Consensus 8 ~~DSP~FRa~l~~~E~~~~~l~~~l~kl~k~~~ 40 (268)
T d2elba1 8 LEDSPQTRSLLGVFEEDATAISNYMNQLYQAMH 40 (268)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999988876553
No 2
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=17.45 E-value=73 Score=21.83 Aligned_cols=25 Identities=20% Similarity=0.222 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Q 020643 25 LLREMKEGLDKLRSKVQSLITKVKG 49 (323)
Q Consensus 25 LL~el~~~l~~v~~~v~~l~~~vk~ 49 (323)
=..+|...+.++...+.|++.++-.
T Consensus 52 ~~ee~~~k~~eLe~~~~PI~~k~y~ 76 (84)
T d1ud0a_ 52 EKEEFEHQQKELEKVCNPIITKLYQ 76 (84)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3578888999999999999988643
No 3
>d1st6a4 a.24.9.1 (A:372-488) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=9.47 E-value=1.6e+02 Score=21.97 Aligned_cols=28 Identities=25% Similarity=0.491 Sum_probs=24.1
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020643 17 KEAPQLAALLREMKEGLDKLRSKVQSLI 44 (323)
Q Consensus 17 kesPEl~~LL~el~~~l~~v~~~v~~l~ 44 (323)
-++|+...|-+.|.+.|.++...|+..+
T Consensus 83 G~sPeA~~lA~qi~~kL~~L~~~v~~Av 110 (117)
T d1st6a4 83 GDSPEARALAKQIATSLQNLQSKTNRAV 110 (117)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999998887554
No 4
>d1sumb_ a.7.12.1 (B:) PhoU homolog TM1734 {Thermotoga maritima [TaxId: 2336]}
Probab=8.69 E-value=1.9e+02 Score=22.49 Aligned_cols=75 Identities=16% Similarity=0.158 Sum_probs=40.7
Q ss_pred hhccHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcCCCCCCCCccHHHH-HH-HHHHHHHHHHHHHHHHHhcCCCCCC
Q 020643 16 KKEAPQLAALLREMKEGLDKLRSKVQ-SLITKVKGNNYPTVDGISYLEA-KH-LLLLNYCQSIVYYLLRKAKGLSIEG 90 (323)
Q Consensus 16 ~kesPEl~~LL~el~~~l~~v~~~v~-~l~~~vk~~~~~~~~GislL~~-K~-~lLLsY~~nL~~ylllK~~g~si~~ 90 (323)
....+++..-+-+..+.++.+...+. .++..+.++......|+.|+.+ ++ .=+-.||.||+-++..-..|..++.
T Consensus 137 ~~~d~~~a~~v~~~d~~id~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lERIgDh~~nIaE~v~y~~~G~~~~~ 214 (225)
T d1sumb_ 137 ADVNVEKSFEVCRMDSKVDDLYEKVREELLLYMMESPKYVKRALLLLEIAGNIEIIADYATNIVEVSVYMVQGEAYKC 214 (225)
T ss_dssp HSCCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEE
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCeeeee
Confidence 33444444444444444554433332 2333333333333456666653 22 3466799999988888788877663
No 5
>d1st6a3 a.24.9.1 (A:253-371) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=7.95 E-value=1.6e+02 Score=21.91 Aligned_cols=25 Identities=28% Similarity=0.477 Sum_probs=21.6
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH
Q 020643 18 EAPQLAALLREMKEGLDKLRSKVQS 42 (323)
Q Consensus 18 esPEl~~LL~el~~~l~~v~~~v~~ 42 (323)
.+|+...|-+.|.+.|.++...|+.
T Consensus 93 ~sPeA~~lA~qi~~kL~~L~~~v~~ 117 (119)
T d1st6a3 93 ATPMAMQKAQQVSQGLDLLTAKVEN 117 (119)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999999988887764
No 6
>d2cbia1 a.246.1.1 (A:496-624) Hyaluronidase, post-catalytic domain 3 {Clostridium perfringens [TaxId: 1502]}
Probab=7.77 E-value=76 Score=24.04 Aligned_cols=16 Identities=38% Similarity=0.570 Sum_probs=13.7
Q ss_pred ccHHHHHHHHHHHHHH
Q 020643 18 EAPQLAALLREMKEGL 33 (323)
Q Consensus 18 esPEl~~LL~el~~~l 33 (323)
+||||.++|.+|.+++
T Consensus 2 ES~EL~~~l~~f~~kl 17 (129)
T d2cbia1 2 DAPELRAKMDELWNKL 17 (129)
T ss_dssp SSHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHH
Confidence 7899999999998754
No 7
>d1chua1 a.7.3.1 (A:423-533) L-aspartate oxidase {Escherichia coli [TaxId: 562]}
Probab=7.64 E-value=3.1e+02 Score=19.30 Aligned_cols=21 Identities=14% Similarity=0.037 Sum_probs=16.4
Q ss_pred ccHHHHHHHHHHHHHHHHHHH
Q 020643 58 ISYLEAKHLLLLNYCQSIVYY 78 (323)
Q Consensus 58 islL~~K~~lLLsY~~nL~~y 78 (323)
-.+++++|.+.+++++..+-+
T Consensus 63 ~~~~el~nml~~A~~i~~aAl 83 (111)
T d1chua1 63 NNLLELRNLVQVAELIVRCAM 83 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999988766653
No 8
>d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=7.35 E-value=3.9e+02 Score=19.37 Aligned_cols=60 Identities=10% Similarity=0.081 Sum_probs=38.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCccHHHHHHHHHHHHHHHHHH
Q 020643 18 EAPQLAALLREMKEGLDKLRSKVQSLITKVKG-NNYPTVDGISYLEAKHLLLLNYCQSIVY 77 (323)
Q Consensus 18 esPEl~~LL~el~~~l~~v~~~v~~l~~~vk~-~~~~~~~GislL~~K~~lLLsY~~nL~~ 77 (323)
|.++|+....+|+..|..+...+..|-..... +...+.....-+.-.-+.+.+.+..+.-
T Consensus 3 d~~~f~~~v~~I~~~i~~i~~~i~~L~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 63 (196)
T d1fioa_ 3 DFVGFMNKISQINRDLDKYDHTINQVDSLHKRLLTEVNEEQASHLRHSLDNFVAQATDLQF 63 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999888877655432 1122333344455445555555555543
No 9
>d2f1ka1 a.100.1.12 (A:166-279) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=5.93 E-value=2.8e+02 Score=19.67 Aligned_cols=27 Identities=19% Similarity=0.268 Sum_probs=14.0
Q ss_pred HhhhccHHHHHHHHHHHHHHHHHHHHH
Q 020643 14 RVKKEAPQLAALLREMKEGLDKLRSKV 40 (323)
Q Consensus 14 ~l~kesPEl~~LL~el~~~l~~v~~~v 40 (323)
++....+.+...|..|...|..+.+.|
T Consensus 64 I~~~N~~~i~~~l~~~~~~L~~l~~~l 90 (114)
T d2f1ka1 64 MATYNQRALLKSLQDYRQHLDQLITLI 90 (114)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555555555544443
No 10
>d1neka1 a.7.3.1 (A:451-588) Succinate dehydogenase {Escherichia coli [TaxId: 562]}
Probab=5.89 E-value=4.9e+02 Score=18.82 Aligned_cols=21 Identities=19% Similarity=0.338 Sum_probs=17.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHH
Q 020643 58 ISYLEAKHLLLLNYCQSIVYY 78 (323)
Q Consensus 58 islL~~K~~lLLsY~~nL~~y 78 (323)
+..++++|.+.+++++..+-+
T Consensus 61 ~~~~el~n~l~~a~~i~~aAl 81 (138)
T d1neka1 61 VECLELDNLMETAYATAVSAN 81 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999887764
Done!