BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020646
(323 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2QQS5|CCT14_ORYSJ Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1
Length = 543
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 122/174 (70%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ SR EIE SPSR+DGID +E++LR SYC F+Q+LG+RL++PQ TI TA+V CHRF++
Sbjct: 37 YFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYL 96
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
R+SHA +DR IAT +FLA K EETPRPL DV+ S E+ HK++ + + ++Q
Sbjct: 97 RQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQ 156
Query: 270 YRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKLGLSQTVLVNLALNLVSEG 323
+E ++ AE+++L TL F+LNV HPY PL + K ++Q L +A N V++G
Sbjct: 157 QKELILLAERVVLATLGFDLNVHHPYKPLVEAIRKFKVAQNALAQVAWNFVNDG 210
>sp|Q8GYM6|CCT14_ARATH Cyclin-T1-4 OS=Arabidopsis thaliana GN=CYCT1-4 PE=1 SV=1
Length = 541
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 119/174 (68%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ R EIE SPSR D ID +ET+LR SYC F+Q+LG+RL++PQ TI TA++ CHRFF+
Sbjct: 34 YFGRKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFI 93
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
R+SHA +DR IAT +FLA K EETPRPL DV+ S E+ HK++ T + + +EQ
Sbjct: 94 RQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKKDPTTAQKIKQKEVYEQ 153
Query: 270 YRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKLGLSQTVLVNLALNLVSEG 323
+E ++ E+++L+TL F+ NV HPY PL + K ++Q L +A N V++G
Sbjct: 154 QKELILNGEKIVLSTLGFDFNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDG 207
>sp|Q2RAC5|CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2
Length = 490
Score = 188 bits (478), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 121/174 (69%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ SR EIE S SR+DGID +E++LR SYC F+Q+LG+RL++PQ TI TA+V CHRFF+
Sbjct: 38 YFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFL 97
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
R+SHA +DR IAT +FLA K EETPRPL DV+ S E+ HK++ + + + +EQ
Sbjct: 98 RQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQKEVYEQ 157
Query: 270 YRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKLGLSQTVLVNLALNLVSEG 323
+E ++ E+++L TL F+LNV HPY PL + K ++Q L +A N V++G
Sbjct: 158 QKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDG 211
>sp|Q9FKE6|CCT15_ARATH Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2
Length = 579
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 119/174 (68%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ R EIE SPSR DGID +ET+LR SYC F+Q+LG+RL++PQ TI TA++ CHRFF
Sbjct: 34 YFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFF 93
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
R+SHA +DR IAT +FLA K EETPRPL DV+ S E+ +K++ + + +EQ
Sbjct: 94 RQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKDPGASQKIKQKEVYEQ 153
Query: 270 YRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKLGLSQTVLVNLALNLVSEG 323
+E ++ E+++L+TL F+LNV HPY PL + K ++Q L +A N V++G
Sbjct: 154 QKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQNALAQVAWNFVNDG 207
>sp|Q56YF8|CCT12_ARATH Cyclin-T1-2 OS=Arabidopsis thaliana GN=CYCT1-2 PE=2 SV=2
Length = 460
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 122/186 (65%), Gaps = 7/186 (3%)
Query: 141 SKLEDDE--PVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIG 198
S L DDE P F SR+EIER SPSR+DGID ET LR SYC F++ LG RL++PQ TI
Sbjct: 21 SNLHDDEIIPWFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKVPQVTIA 80
Query: 199 TAMVLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLL 258
TA+ CHRFF+R+SHA +DR IAT + LA K EETP L DV+ AS E HK++ L
Sbjct: 81 TAIFFCHRFFLRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYERIHKKD---L 137
Query: 259 SYLLPIDWFEQYRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKLGL--SQTVLVNLA 316
+ + ++Q +E V+ E+++L+TLNF+L + HPY PL + K + ++T L A
Sbjct: 138 AGAQRKEVYDQQKELVLIGEELVLSTLNFDLCISHPYKPLVEAIKKYMVEDAKTQLAQFA 197
Query: 317 LNLVSE 322
N V++
Sbjct: 198 WNFVND 203
>sp|Q0E474|CCT11_ORYSJ Cyclin-T1-1 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=3 SV=2
Length = 446
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 122/174 (70%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+++RDE+ER SPSR+DG+ A +E LR +YC+FI+++GLRL+LPQ TI TA +LCHRF++
Sbjct: 10 YVTRDEVERGSPSRRDGVGAAKEAELRATYCSFIRDVGLRLQLPQVTIATATLLCHRFYL 69
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
R+SHA ++ +AT +FLA+K E+TP PL V+ + E ++++ + + E+
Sbjct: 70 RQSHAKNEWQTVATVCVFLASKIEDTPCPLQRVIIVAYETMYRKDCNAAHRIYQKEVLEK 129
Query: 270 YRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKLGLSQTVLVNLALNLVSEG 323
+E ++ E ++L+T+ F+ N+QHPY+PL L KLG+ Q + +A+NL+++
Sbjct: 130 QKELILVGETLLLSTIRFDFNIQHPYEPLKLALKKLGIFQMEVKQVAVNLINDA 183
>sp|Q6Z7H3|CCT12_ORYSJ Cyclin-T1-2 OS=Oryza sativa subsp. japonica GN=CYCT1_2 PE=2 SV=2
Length = 630
Score = 157 bits (397), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 118/173 (68%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ +R+E+E+FSPSRKDGI + E+ +R YC+FI+++G+RL+LPQ TI TA++ CHRF++
Sbjct: 19 YFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRFYL 78
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
+S A + IAT +FLA+K E+TP PL+ V+R + ++++ + D FE+
Sbjct: 79 YQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYRRDPATARRIHQKDVFEK 138
Query: 270 YRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKLGLSQTVLVNLALNLVSE 322
+ ++ E+++LTT+ F+ N+QHPY PL + KLG+SQ + +A N V++
Sbjct: 139 QKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQKEVKQVAWNFVND 191
>sp|Q8LBC0|CCT13_ARATH Cyclin-T1-3 OS=Arabidopsis thaliana GN=CYCT1-3 PE=1 SV=2
Length = 317
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 111/156 (71%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ SR+EIERFSPSRKDGID ++E+ LR SYC F+Q LG++L + Q TI AMV+CHRF++
Sbjct: 35 YFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRFYM 94
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
R+SHA +D IAT++LFLA K+E+ P L+ V+ AS E+ ++ + + + + + +
Sbjct: 95 RQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRIHQTECYHE 154
Query: 270 YRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKL 305
++E ++ E ++L+T F L+++ PY PL + LN+L
Sbjct: 155 FKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRL 190
>sp|Q9C8P7|CCT11_ARATH Putative cyclin-T1-1 OS=Arabidopsis thaliana GN=CYCT1-1 PE=3 SV=1
Length = 247
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 90/145 (62%), Gaps = 9/145 (6%)
Query: 152 SRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRR 211
+R+ IE+ SPSR DGI+ ET R+SY +F+Q LG RL PQ TI TA+VLC RFF R+
Sbjct: 10 TREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTRQ 69
Query: 212 SHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSE-LYHKQNITLLSYLLPIDWFEQY 270
S +D +A +F+A K E +PRP DV+ S L++K+ + D FE+
Sbjct: 70 SLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFNKEPLR--------DVFERL 121
Query: 271 RERVIEAEQMILTTLNFELNVQHPY 295
+ V+ E+++L+TL +L ++HPY
Sbjct: 122 KMTVLTGEKLVLSTLECDLEIEHPY 146
>sp|Q9QWV9|CCNT1_MOUSE Cyclin-T1 OS=Mus musculus GN=Ccnt1 PE=1 SV=3
Length = 724
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ +R+++E SPSR+ G+D+ +E R +Q++G RL + Q TI TA+V HRF++
Sbjct: 13 YFTREQLEN-SPSRRFGVDSDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYM 71
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
+S R+ +A AALFLAAK EE P+ L V++ + H Q LP E
Sbjct: 72 IQSFTQFHRYSMAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQES------LPDTRSEA 125
Query: 270 YRERV---IEAEQMILTTLNFELNVQHPY 295
Y ++V + E +IL TL FEL + HP+
Sbjct: 126 YLQQVQDLVILESIILQTLGFELTIDHPH 154
>sp|O74627|CG1C_SCHPO Cyclin pch1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pch1 PE=1 SV=1
Length = 342
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+S+D++ F+PS DGI +E R C FI N+GLRL+LPQT + TA + HRF++
Sbjct: 19 IISKDQL-VFTPSALDGIPLDQEEIQRSKGCNFIINVGLRLKLPQTALATANIYFHRFYL 77
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
R S + + +A +FLA K E++ R L D++ +++ K + L+ W +
Sbjct: 78 RFSLKNYHYYEVAATCIFLATKVEDSVRKLRDIVINCAKVAQKNSNVLVDEQTKEYW--R 135
Query: 270 YRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKL 305
+R+ ++ E+++L L F+ V+HPY + S + K
Sbjct: 136 WRDVILYTEEVLLEALCFDFTVEHPYPYVLSFIKKF 171
>sp|Q9XT26|CCNT1_HORSE Cyclin-T1 OS=Equus caballus GN=CCNT1 PE=1 SV=1
Length = 727
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ +R+++E SPSR+ G+D +E R +Q++G RL + Q TI TA+V HRF++
Sbjct: 13 YFTREQLEN-SPSRRFGLDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYM 71
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
+S R +A AALFLAAK EE P+ L V++ + H Q LP E
Sbjct: 72 IQSFTQFHRNSVAPAALFLAAKVEEQPKKLEHVIKVAHACLHPQES------LPDTRSEA 125
Query: 270 YRERV---IEAEQMILTTLNFELNVQHPY 295
Y ++V + E +IL TL FEL + HP+
Sbjct: 126 YLQQVQDLVILESIILQTLGFELTIDHPH 154
>sp|O60583|CCNT2_HUMAN Cyclin-T2 OS=Homo sapiens GN=CCNT2 PE=1 SV=2
Length = 730
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
F +R+++E +PSR+ G++A +E R IQ +G RL + Q TI TA+V HRF++
Sbjct: 12 FFTREQLEN-TPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHRFYM 70
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLL--PIDWF 267
S ++ II++ ALFLAAK EE R L V++ + H L LL D +
Sbjct: 71 HHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHP-----LEPLLDTKCDAY 125
Query: 268 EQYRERVIEAEQMILTTLNFELNVQHPY 295
Q + ++ E ++L TL FE+ ++HP+
Sbjct: 126 LQQTQELVILETIMLQTLGFEITIEHPH 153
>sp|Q6T8E9|CCNT1_BOVIN Cyclin-T1 OS=Bos taurus GN=CCNT1 PE=1 SV=1
Length = 727
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ +R+++E SPSR+ G+D +E R +Q++G RL + Q TI TA+V HRF++
Sbjct: 13 YFTREQLEN-SPSRRFGLDPDKELSNRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYM 71
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
+S R +A AALFLAAK EE P+ L V++ + H Q LP E
Sbjct: 72 IQSFTQFHRNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQES------LPDTRSEA 125
Query: 270 YRERV---IEAEQMILTTLNFELNVQHPY 295
Y ++V + E +IL TL FEL + HP+
Sbjct: 126 YLQQVQDLVILESIILQTLGFELTIDHPH 154
>sp|Q6GN15|CCNL1_XENLA Cyclin-L1 OS=Xenopus laevis GN=ccnl1 PE=2 SV=2
Length = 496
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 157 ERFSP--SRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 214
ER SP S DG+D ET LR C IQ+ G+ L LPQ + T VL HRFF +S
Sbjct: 42 ERLSPTPSMSDGLDLNTETDLRILGCELIQSAGILLRLPQVAMATGQVLFHRFFYSKSFV 101
Query: 215 CHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRERV 274
H IIA A + LA+K EE PR + DV+ L + S L+ + + V
Sbjct: 102 KHSFEIIAMACINLASKIEEAPRRIRDVINVCHHLRQIRAKRTPSPLILDQSYINTKNHV 161
Query: 275 IEAEQMILTTLNFELNVQHPYDPLTSILNKL 305
I+AE+ IL L F ++V+HP+ + L L
Sbjct: 162 IKAERRILKELGFCVHVKHPHKIIVMYLQVL 192
>sp|Q52KE7|CCNL1_MOUSE Cyclin-L1 OS=Mus musculus GN=Ccnl1 PE=1 SV=1
Length = 532
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 157 ERFSP--SRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 214
ER SP S +DG+D ET LR C IQ G+ L LPQ + T VL HRFF +S
Sbjct: 68 ERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFV 127
Query: 215 CHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRERV 274
H I+A A + LA+K EE PR + DV+ L + S L+ + + +V
Sbjct: 128 KHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQV 187
Query: 275 IEAEQMILTTLNFELNVQHPYDPLTSILNKL 305
I+AE+ +L L F ++V+HP+ + L L
Sbjct: 188 IKAERRVLKELGFCVHVKHPHKIIVMYLQVL 218
>sp|Q9R1Q2|CCNL1_RAT Cyclin-L1 OS=Rattus norvegicus GN=Ccnl1 PE=1 SV=1
Length = 527
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 157 ERFSP--SRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 214
ER SP S +DG+D ET LR C IQ G+ L LPQ + T VL HRFF +S
Sbjct: 63 ERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFV 122
Query: 215 CHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRERV 274
H I+A A + LA+K EE PR + DV+ L + S L+ + + +V
Sbjct: 123 KHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQV 182
Query: 275 IEAEQMILTTLNFELNVQHPYDPLTSILNKLGLSQ-TVLVNLALNLVSE 322
I+AE+ +L L F ++V+HP+ + L L + LV A N +++
Sbjct: 183 IKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMND 231
>sp|Q9UK58|CCNL1_HUMAN Cyclin-L1 OS=Homo sapiens GN=CCNL1 PE=1 SV=1
Length = 526
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 157 ERFSP--SRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 214
ER SP S +DG+D ET LR C IQ G+ L LPQ + T VL HRFF +S
Sbjct: 62 ERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFV 121
Query: 215 CHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRERV 274
H I+A A + LA+K EE PR + DV+ L + S L+ + + +V
Sbjct: 122 KHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQV 181
Query: 275 IEAEQMILTTLNFELNVQHPYDPLTSILNKLGLSQ-TVLVNLALNLVSE 322
I+AE+ +L L F ++V+HP+ + L L + LV A N +++
Sbjct: 182 IKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMND 230
>sp|O60563|CCNT1_HUMAN Cyclin-T1 OS=Homo sapiens GN=CCNT1 PE=1 SV=1
Length = 726
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ +R+++E SPSR+ G+D +E R +Q++G RL + Q TI TA+V HRF++
Sbjct: 13 YFTREQLEN-SPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYM 71
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
+S +A AALFLAAK EE P+ L V++ + H Q LP E
Sbjct: 72 IQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQES------LPDTRSEA 125
Query: 270 YRERV---IEAEQMILTTLNFELNVQHPY 295
Y ++V + E +IL TL FEL + HP+
Sbjct: 126 YLQQVQDLVILESIILQTLGFELTIDHPH 154
>sp|Q8HXN7|CCNT1_PANTR Cyclin-T1 OS=Pan troglodytes GN=CCNT1 PE=2 SV=1
Length = 725
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ +R+++E SPSR+ G+D +E R +Q++G RL + Q TI TA+V HRF++
Sbjct: 12 YFTREQLEN-SPSRRFGVDPDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVYMHRFYM 70
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
+S +A AALFLAAK EE P+ L V++ + H Q LP E
Sbjct: 71 IQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQES------LPDTRSEA 124
Query: 270 YRERV---IEAEQMILTTLNFELNVQHPY 295
Y ++V + E +IL TL FEL + HP+
Sbjct: 125 YLQQVQDLVILESIILQTLGFELTIDHPH 153
>sp|Q5ZJP9|CCNL1_CHICK Cyclin-L1 OS=Gallus gallus GN=CCNL1 PE=2 SV=1
Length = 534
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%)
Query: 158 RFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHD 217
RF+PS G+D ET LR + C IQ G+ L LPQ + T VL RFF +S H
Sbjct: 71 RFTPSMSSGLDPDTETELRVTGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHS 130
Query: 218 RFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRERVIEA 277
++ A + LA+K EE PR + DV+ L H + L+ + + ++I+A
Sbjct: 131 MEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLILDQEYVNLKNQIIKA 190
Query: 278 EQMILTTLNFELNVQHPYDPLTSILNKL 305
E+ +L L F ++V+HP+ + L L
Sbjct: 191 ERRVLKELGFCVHVKHPHKIIVMYLQVL 218
>sp|Q9JJA7|CCNL2_MOUSE Cyclin-L2 OS=Mus musculus GN=Ccnl2 PE=1 SV=1
Length = 518
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%)
Query: 154 DEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSH 213
D+ RF+PS G+D ET LR C IQ G+ L LPQ + T VL RFF +S
Sbjct: 54 DDKLRFTPSMSSGLDVDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSF 113
Query: 214 ACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRER 273
H ++ A + LA+K EE PR + DV+ L H + L+ + + +
Sbjct: 114 VKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQ 173
Query: 274 VIEAEQMILTTLNFELNVQHPYDPLTSILNKL 305
+I+AE+ +L L F ++V+HP+ + L L
Sbjct: 174 IIKAERRVLKELGFCVHVKHPHKIIVMYLQVL 205
>sp|Q8RWV3|CCL11_ARATH Cyclin-L1-1 OS=Arabidopsis thaliana GN=CYCL1-1 PE=2 SV=2
Length = 416
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
F DE + SPSRKDGID E LR C IQ G+ L+LPQ + T VL RF+
Sbjct: 9 FYLSDEQLKASPSRKDGIDETTEISLRIYGCDLIQEGGILLKLPQAVMATGQVLFQRFYC 68
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSEL-YHKQNITLLSYLLPIDWFE 268
++S A D I+A + ++LA+K EE P+ V+ + ++N+ L + F
Sbjct: 69 KKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENLPLEHLDMYAKKFS 128
Query: 269 QYRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKL 305
+ + + E+ IL + F +V+HP+ +++ L L
Sbjct: 129 ELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATL 165
>sp|Q5I0H5|CCNL2_RAT Cyclin-L2 OS=Rattus norvegicus GN=Ccnl2 PE=2 SV=2
Length = 520
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%)
Query: 154 DEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSH 213
D+ RF+PS G+D ET LR C IQ G+ L LPQ + T VL RFF +S
Sbjct: 54 DDKLRFTPSMSSGLDIDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSF 113
Query: 214 ACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRER 273
H ++ A + LA+K EE PR + DV+ L H + L+ + + +
Sbjct: 114 VKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQ 173
Query: 274 VIEAEQMILTTLNFELNVQHPYDPLTSILNKL 305
+I+AE+ +L L F ++V+HP+ + L L
Sbjct: 174 IIKAERRVLKELGFCVHVKHPHKIIVMYLQVL 205
>sp|Q7ZVX0|CCNL1_DANRE Cyclin-L1 OS=Danio rerio GN=ccnl1 PE=1 SV=1
Length = 498
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 4/166 (2%)
Query: 160 SPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRF 219
+PS DG+D ET LR C IQ+ G+ L LPQ + T V+ RFF +S H+
Sbjct: 47 TPSMLDGLDHETETDLRILGCERIQSAGILLRLPQVAMATGQVIFQRFFFSKSFVKHNFE 106
Query: 220 IIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDW-FEQYRERVIEAE 278
I+A A + LA+K EE+PR + DV+ L KQ S L +D + + +VI+AE
Sbjct: 107 IVAMACVNLASKIEESPRRVRDVINVFHHL--KQGKGKKSTPLILDQNYINTKNQVIKAE 164
Query: 279 QMILTTLNFELNVQHPYDPLTSILNKLGLSQ-TVLVNLALNLVSEG 323
+ IL L F ++V+HP+ + L L + +LV A N +++
Sbjct: 165 RRILKELGFCVHVKHPHKIIVMYLQVLECEKNQMLVQTAWNYMNDA 210
>sp|Q96S94|CCNL2_HUMAN Cyclin-L2 OS=Homo sapiens GN=CCNL2 PE=1 SV=1
Length = 520
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%)
Query: 154 DEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSH 213
D+ RF+PS G+D ET LR C IQ G+ L LPQ + T VL RFF +S
Sbjct: 56 DDKLRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSF 115
Query: 214 ACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRER 273
H ++ A + LA+K EE PR + DV+ L ++ LL + + +
Sbjct: 116 VKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRQLRDKKKPVPLLLDQDYVNLKNQ 175
Query: 274 VIEAEQMILTTLNFELNVQHPYDPLTSILNKL 305
+I+AE+ +L L F ++V+HP+ + L L
Sbjct: 176 IIKAERRVLKELGFCVHVKHPHKIIVMYLQVL 207
>sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1
Length = 427
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
Query: 149 VFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFF 208
F DE R SPSRKDGID ET LR C IQ G+ L+LPQ + TA VL HRF+
Sbjct: 8 TFYLTDEQLRDSPSRKDGIDEATETALRVYGCDLIQESGILLKLPQAVMATAQVLFHRFY 67
Query: 209 VRRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELY-HKQNITLLSYLLPIDWF 267
++S +A + ++LA K EE+PR ++ + ++N+ + + +
Sbjct: 68 CKKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECRRENVPIEHLDVFSKKY 127
Query: 268 EQYRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKLGLSQTVLVNLALNLVSE 322
+ ++ E+ +L + F +V+HP+ +++ L L + L A NL ++
Sbjct: 128 SDLKHDLVRTERHLLKEMGFICHVEHPHKFISNYLATLEAPE--LTQEAWNLAND 180
>sp|Q5BKF8|CCNL2_XENTR Cyclin-L2 OS=Xenopus tropicalis GN=ccnl2 PE=2 SV=1
Length = 497
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 73/147 (49%)
Query: 159 FSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDR 218
+PS DGID E LR C +Q G+ L LPQ + T VL RFF +S H
Sbjct: 39 LTPSVVDGIDVNTEIDLRCVGCELVQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSM 98
Query: 219 FIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAE 278
+A A + LA+K EE PR + DV+ L + + L+ + + ++I+AE
Sbjct: 99 EHVAMACVHLASKIEEAPRRIRDVINVFHRLRQLREKQKSTPLILDQEYVNLKNQIIKAE 158
Query: 279 QMILTTLNFELNVQHPYDPLTSILNKL 305
+ +L L F ++V+HP+ + L L
Sbjct: 159 RRVLKELGFCVHVKHPHKIIVMYLQVL 185
>sp|O96433|CCNT_DROME Cyclin-T OS=Drosophila melanogaster GN=CycT PE=1 SV=2
Length = 1097
Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 16/156 (10%)
Query: 143 LEDDEPVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMV 202
E D+ + S D++ SPSR+ GI E R IQ +G RL++ Q I TA+V
Sbjct: 39 FEKDKIWYFSNDQLAN-SPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQVSQLCINTAIV 97
Query: 203 LCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLL 262
HRF+ S R +A+A+LFLAAK EE PR L V+RA+++ L
Sbjct: 98 YMHRFYAFHSFTHFHRNSMASASLFLAAKVEEQPRKLEHVIRAANK------------CL 145
Query: 263 PIDWFEQYRE---RVIEAEQMILTTLNFELNVQHPY 295
P + Y E ++ E ++L TL F++ + HP+
Sbjct: 146 PPTTEQNYAELAQELVFNENVLLQTLGFDVAIDHPH 181
>sp|O75909|CCNK_HUMAN Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2
Length = 580
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 160 SPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRF 219
+PS+ +G+D E R FI ++G RL L T+ T ++ HRF++ S R+
Sbjct: 34 TPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRY 93
Query: 220 IIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAEQ 279
+ LFLA K EETP+ D+++ + L + + +E V+ E+
Sbjct: 94 VTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFG--------DDPKEEVMVLER 145
Query: 280 MILTTLNFELNVQHPYDPLTSILNKLGLSQ---TVLVNLALNLVSE 322
++L T+ F+L V+HPY L +L + LV +A V++
Sbjct: 146 ILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVND 191
>sp|O88874|CCNK_MOUSE Cyclin-K OS=Mus musculus GN=Ccnk PE=1 SV=3
Length = 554
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 160 SPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRF 219
+PS+ +G+D E R FI ++G RL L T+ T ++ HRF++ S R+
Sbjct: 34 TPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRY 93
Query: 220 IIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAEQ 279
+ LFLA K EETP+ D+++ + L + + +E V+ E+
Sbjct: 94 VTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFG--------DDPKEEVMVLER 145
Query: 280 MILTTLNFELNVQHPYDPLTSILNKLGLSQ---TVLVNLALNLVSE 322
++L T+ F+L V+HPY L +L + LV +A V++
Sbjct: 146 ILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVND 191
>sp|Q5RD50|CCNL1_PONAB Cyclin-L1 OS=Pongo abelii GN=CCNL1 PE=3 SV=1
Length = 172
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 157 ERFSP--SRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 214
ER SP S +DG+D ET LR C IQ G+ L LPQ + T VL HRFF +S
Sbjct: 62 ERLSPTPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFV 121
Query: 215 CHDRFIIATAALFLAAKSEETPRPLNDVL 243
H I+A A + LA+K EE PR + DV+
Sbjct: 122 KHSFEIVAMACINLASKIEEAPRRIRDVI 150
>sp|Q86KE7|CCNC_DICDI Cyclin-C OS=Dictyostelium discoideum GN=cycC PE=3 SV=1
Length = 255
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ R++IE +P K + + LR YC IQNLG L+L Q I TA+V RF++
Sbjct: 15 LLDRNKIEESNPKDKQYLTPIELKKLRTHYCFVIQNLGNALKLRQRAISTAIVYFKRFYL 74
Query: 210 RRSHA-CHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFE 268
+ S C R ++A L+L++K EE E+ H N YL+
Sbjct: 75 KNSFVDCEPR-LVAVTCLYLSSKVEECITQAKKCAAKMKEIDHSFN-----YLM------ 122
Query: 269 QYRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKLGL 307
++E E +L L+F L + HPY L L GL
Sbjct: 123 ---NDILECEFFVLEELDFCLIIYHPYKSLPFYLQSSGL 158
>sp|Q503D6|FA58A_DANRE Cyclin-related protein FAM58A OS=Danio rerio GN=fam58a PE=2 SV=1
Length = 247
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 172 ETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAK 231
+TH R C FI G++L + + TA VL HRFF S ++ +++A +A+ LA K
Sbjct: 27 KTHFRV--CRFITETGVKLGMRSVPMATACVLYHRFFQSASLQIYEPYLVAMSAIHLAGK 84
Query: 232 SEETPRPLNDVLRASSELYHKQNITLLSYLLPIDW---FEQYRERVIEAEQMILTTLNFE 288
EE D++ +H + P++ F + R+ +++ E +IL LNF+
Sbjct: 85 VEEQHLRTRDIINVCHRYFHPDS-------EPLELNGKFWELRDSIVQCELLILRQLNFQ 137
Query: 289 LNVQHPYDPLT-------SILNKLGLSQTVLVNLALNLVSE 322
+ +HP+ L S+LN+ S+T + AL ++ +
Sbjct: 138 VTFEHPHKYLLHYLLSVRSLLNRHAWSRTPIAETALAVLKD 178
>sp|Q62447|CCNC_MOUSE Cyclin-C OS=Mus musculus GN=Ccnc PE=2 SV=4
Length = 283
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 183 IQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLNDV 242
IQ LG L+L Q I TA V RF+ R S D ++A +FLA+K EE N
Sbjct: 48 IQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTR 107
Query: 243 LRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAEQMILTTLNFELNVQHPYDPLTSIL 302
L A++ K T SY P + F ++E E +L ++ L V HPY PL +
Sbjct: 108 LIAATTSVLK---TRFSYAFPKE-FPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYV 163
Query: 303 NKLGLSQTVLVNLALNLVSE 322
+G + VL+ LA +V++
Sbjct: 164 QDMG-QEDVLLPLAWRIVND 182
>sp|Q3ZCK5|CCNC_BOVIN Cyclin-C OS=Bos taurus GN=CCNC PE=2 SV=1
Length = 283
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 183 IQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLNDV 242
IQ LG L+L Q I TA V RF+ R S D ++A +FLA+K EE N
Sbjct: 48 IQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTR 107
Query: 243 LRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAEQMILTTLNFELNVQHPYDPLTSIL 302
L A++ K T SY P + F V+E E +L ++ L V HPY PL +
Sbjct: 108 LIAAATSVLK---TRFSYAFPKE-FPYKMNHVLECEFYLLELMDCCLIVYHPYRPLLQYV 163
Query: 303 NKLGLSQTVLVNLALNLVSE 322
+G + +L+ LA +V++
Sbjct: 164 QDMG-QEDMLLPLAWRIVND 182
>sp|P39947|CCNC_RAT Cyclin-C OS=Rattus norvegicus GN=Ccnc PE=2 SV=2
Length = 278
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 183 IQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLNDV 242
IQ LG L+L Q I TA V RF+ R S D ++A +FLA+K EE N
Sbjct: 43 IQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTS 102
Query: 243 LRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAEQMILTTLNFELNVQHPYDPLTSIL 302
L A++ K T SY P + F ++E E +L ++ L V HPY PL +
Sbjct: 103 LIAATTSVLK---TRFSYASPKE-FPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYV 158
Query: 303 NKLGLSQTVLVNLALNLVSE 322
+G + VL+ LA +V++
Sbjct: 159 QDMG-QEDVLLPLAWRIVND 177
>sp|P24863|CCNC_HUMAN Cyclin-C OS=Homo sapiens GN=CCNC PE=1 SV=2
Length = 283
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 183 IQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLNDV 242
IQ LG L+L Q I TA V RF+ R S D ++A +FLA+K EE N
Sbjct: 48 IQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTR 107
Query: 243 LRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAEQMILTTLNFELNVQHPYDPLTSIL 302
L A++ K T SY P + F ++E E +L ++ L V HPY PL +
Sbjct: 108 LIAAATSVLK---TRFSYAFPKE-FPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYV 163
Query: 303 NKLGLSQTVLVNLALNLVSE 322
+G + +L+ LA +V++
Sbjct: 164 QDMG-QEDMLLPLAWRIVND 182
>sp|P34425|CCNT1_CAEEL Cyclin-T1.1 OS=Caenorhabditis elegans GN=cit-1.1 PE=3 SV=1
Length = 468
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNL--GL------RLELPQTTIGTAM 201
+++E+++ + S ++G+ E R AFIQ + GL ++++ T + A
Sbjct: 21 LFTKEEMKK-TASIQEGMSREEELASRQMAAAFIQEMIDGLNNVKDPKMKIGHTGLCVAH 79
Query: 202 VLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYL 261
HRF+ S +D + A +FLA KS+E PR L+ V+ E ++ +T +
Sbjct: 80 THMHRFYYLHSFKKYDYRDVGAACVFLAGKSQECPRKLSHVISVWRERKDRKQLTTETAR 139
Query: 262 LPIDWFEQYRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKL 305
+ + ++ E MIL T+ F+LNV P+ + I+ K+
Sbjct: 140 ------NEAAQIIVLLESMILQTIAFDLNVHLPHIYVLDIMKKV 177
>sp|Q8N1B3|FA58A_HUMAN Cyclin-related protein FAM58A OS=Homo sapiens GN=FAM58A PE=1 SV=2
Length = 248
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 172 ETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAK 231
E + + FI G++L + I TA + H+FF + +D ++IA ++++LA K
Sbjct: 23 EARVHFRVARFIMEAGVKLGMRSIPIATACTIYHKFFCETNLDAYDPYLIAMSSIYLAGK 82
Query: 232 SEETPRPLNDVLRASSELYHKQNITLLSYLLPIDW---FEQYRERVIEAEQMILTTLNFE 288
EE D++ S+ ++ P++ F + R+ +++ E ++L L F+
Sbjct: 83 VEEQHLRTRDIINVSNRYFNPSG-------EPLELDSRFWELRDSIVQCELLMLRVLRFQ 135
Query: 289 LNVQHPYDPLTSILNKL 305
++ QHP+ L L L
Sbjct: 136 VSFQHPHKYLLHYLVSL 152
>sp|P55168|CCNC_CHICK Cyclin-C OS=Gallus gallus GN=CCNC PE=2 SV=1
Length = 283
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 183 IQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLNDV 242
IQ LG L+L Q I TA V RF+ R S D ++A +FLA+K EE N
Sbjct: 48 IQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTR 107
Query: 243 LRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAEQMILTTLNFELNVQHPYDPLTSIL 302
L +++ K T SY P + F ++E E +L ++ L V HPY PL +
Sbjct: 108 LISAATSVLK---TRFSYAFPKE-FPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYV 163
Query: 303 NKLGLSQTVLVNLALNLVSE 322
+G + +L+ LA +V++
Sbjct: 164 QDMG-QEDMLLPLAWRIVND 182
>sp|Q4QQW5|FA58A_RAT Cyclin-related protein FAM58A OS=Rattus norvegicus GN=Fam58a PE=2
SV=1
Length = 250
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 182 FIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLND 241
FI G++L + I TA + H+FF + +D +++A ++L+LA K EE D
Sbjct: 35 FIMEAGVKLGMQSIPIATACTIYHKFFCEINLDAYDLYLVAMSSLYLAGKVEEQHLRTRD 94
Query: 242 VLRASSELYHKQNITLLSYLLPID-WFEQYRERVIEAEQMILTTLNFELNVQHPYDPLTS 300
++ S ++ S L +D F + R+ +++ E ++L L F+++ QHP+ L
Sbjct: 95 IINVSHRYFNPG-----SEPLELDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLH 149
Query: 301 ILNKL 305
L L
Sbjct: 150 YLISL 154
>sp|Q8QZR8|FA58B_MOUSE Cyclin-related protein FAM58B OS=Mus musculus GN=Fam58b PE=2 SV=2
Length = 250
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 172 ETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAK 231
E + + FI G++L + I TA + H+FF + +D +++A ++++LA K
Sbjct: 25 EARVHFRVTRFIMEAGVKLGMQSIPIATACTIYHKFFCEINLDAYDLYLVAMSSIYLAGK 84
Query: 232 SEETPRPLNDVLRASSELYHKQNITLLSYLLPID-WFEQYRERVIEAEQMILTTLNFELN 290
EE D++ S ++ S L +D F + R+ +++ E ++L L F+++
Sbjct: 85 VEEQHLRTRDIINVSHRYFNPG-----SEPLELDSRFWELRDSIVQCELLMLRVLRFQVS 139
Query: 291 VQHPYDPLTSILNKL 305
QHP+ L L L
Sbjct: 140 FQHPHKYLLHYLISL 154
>sp|Q4KLA0|CCNC_XENLA Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1
Length = 283
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 183 IQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLNDV 242
IQ LG L+L Q I TA V RF+ R S D ++A +FLA+K EE N
Sbjct: 48 IQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTR 107
Query: 243 LRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAEQMILTTLNFELNVQHPYDPLTSIL 302
L +++ K T SY P + F ++E E +L ++ L V HPY PL +
Sbjct: 108 LISAATSVLK---TRFSYAFPKE-FPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYV 163
Query: 303 NKLGLSQTVLVNLALNLVSE 322
+G + +L+ LA +V++
Sbjct: 164 QDMG-QEDMLLPLAWRIVND 182
>sp|Q6NRK9|FA58A_XENLA Cyclin-related protein FAM58A OS=Xenopus laevis GN=fam58a PE=2 SV=2
Length = 244
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 171 RETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAA 230
++ + + FI G++L + I TA + H+F+ S +D ++A +A++LA
Sbjct: 18 KDVKIHFKVARFIMEAGVKLGMHSVPIATACTIYHKFYKETSLENYDPHLVAMSAIYLAG 77
Query: 231 KSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAEQMILTTLNFELN 290
K EE D++ H+ N L F + R+ ++ E ++L LNF ++
Sbjct: 78 KVEEQHLRTRDIINVC----HRYNNPGSEPLEVDSKFWELRDNIVHCELLMLRMLNFRVS 133
Query: 291 VQHPYDPLTSILNKL 305
QHP+ L L L
Sbjct: 134 FQHPHKYLLHYLISL 148
>sp|Q28F72|CCNC_XENTR Cyclin-C OS=Xenopus tropicalis GN=ccnc PE=2 SV=1
Length = 283
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 183 IQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLNDV 242
IQ LG L+L Q I TA V RF+ R S D ++A +FLA+K EE N
Sbjct: 48 IQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTR 107
Query: 243 LRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAEQMILTTLNFELNVQHPYDPLTSIL 302
L +++ K T SY P + F ++E E +L ++ L V HPY PL +
Sbjct: 108 LISAATSVLK---TRFSYAFPKE-FPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYV 163
Query: 303 NKLGLSQTVLVNLALNLVSE 322
+G + +L+ LA +V++
Sbjct: 164 QDMG-QEDMLLPLAWRIVND 182
>sp|Q9HE63|SSN8_NEUCR RNA polymerase II holoenzyme cyclin-like subunit OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=ssn-8 PE=3 SV=2
Length = 345
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 43/192 (22%)
Query: 140 RSKLEDDEPVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGT 199
R+KLE +EP ++ + + HL + I LG R+ L Q + T
Sbjct: 25 RAKLEAEEPNLVASFPLPQLR-------------HLNIYFNQQINRLGKRMGLRQQALAT 71
Query: 200 AMVLCHRFF----VRRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNI 255
A V RF+ +RR++ H + AL+LA K EE P Q+I
Sbjct: 72 AQVYIKRFYTKVEIRRTNPHH----VLVTALYLACKMEECP----------------QHI 111
Query: 256 TLLS----YLLPIDWFEQYR-ERVIEAEQMILTTLNFELNVQHPYDPLTSILNKLGLSQT 310
L++ P D+ Q R+ E E +++ ++ L V PY LTS+ +LGL+Q
Sbjct: 112 RLMANEARGFWPTDFQSQTEVARIGECEFYLISEMSSHLIVHSPYRTLTSLQGELGLAQE 171
Query: 311 VLVNLALNLVSE 322
VNLA +++++
Sbjct: 172 D-VNLAWSVIND 182
>sp|P0C7Q3|FA58B_HUMAN Putative cyclin-related protein FAM58B OS=Homo sapiens GN=FAM58BP
PE=5 SV=1
Length = 252
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 182 FIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLND 241
FI G++L + I TA + +FF D ++IA ++++LA K EE P +D
Sbjct: 37 FIMEAGVKLGMQSIPIATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHD 96
Query: 242 VLRASSELYH--KQNITLLSYLLPIDWFEQYRERVIEAEQMILTTLNFELNVQHPYDPLT 299
++ S+ ++ + + L S L W + R+ +++ E ++L L F+++ QHP+ L
Sbjct: 97 IISVSNRYFNPSSEPLGLDSRL----W--ELRDSIVQRELLMLRVLRFQVSFQHPHKYLL 150
Query: 300 SILNKL 305
L L
Sbjct: 151 YYLVSL 156
>sp|O59748|CTK2_SCHPO CTD kinase subunit beta OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=lsc1 PE=1 SV=2
Length = 335
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 6/174 (3%)
Query: 150 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFV 209
+ S EI R +R +E +LR A+I L L+ P T G AM+L RF +
Sbjct: 17 YYSEKEISRILSTRDP-----KENNLRMQAFAWISTLSKTLKFPVRTSGLAMLLYSRFQL 71
Query: 210 RRSHACHDRFIIATAALFLAAKSEETPRPLNDVLRASSELYHKQNITLLSYLLPIDWFEQ 269
ATA L +A+K E+T + D+L A H + + E+
Sbjct: 72 FFPVNEIPLLECATACLVVASKIEDTAKKFRDILLAHYLQKHPGSEVDAHSQVCYKLIEE 131
Query: 270 YRERVIEAEQMILTTLNFELNVQHPYDPLTSILNKLGLSQTVLVNLALNLVSEG 323
++R++ E+M L + F+ V+HP++ + L S + ++A N+ ++
Sbjct: 132 NKKRILGLERMTLELICFDFRVRHPHNYMVKFAKSLKFSSST-ASIAWNVCTDA 184
>sp|Q9FJK7|CCC12_ARATH Cyclin-C1-2 OS=Arabidopsis thaliana GN=CYCC1-2 PE=2 SV=1
Length = 253
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 12/141 (8%)
Query: 182 FIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHACHDRFIIATAALFLAAKSEETPRPLND 241
+I L +++ Q + TA+ R + R+S ++ ++A L+LA K+EE+
Sbjct: 47 YISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEESVVHAKL 106
Query: 242 VLRASSELYHKQNITLLSYLLPIDWFEQYRERVIEAEQMILTTLNFELNVQHPYDPLTSI 301
++ +LY + F + ++E E +L LNF L V HPY L
Sbjct: 107 LVFYMKKLYADEK------------FRYEIKDILEMEMKVLEALNFYLVVFHPYRSLPEF 154
Query: 302 LNKLGLSQTVLVNLALNLVSE 322
L G++ T + +L LV++
Sbjct: 155 LQDSGINDTSMTHLTWGLVND 175
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,573,860
Number of Sequences: 539616
Number of extensions: 4782218
Number of successful extensions: 25116
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 17667
Number of HSP's gapped (non-prelim): 5332
length of query: 323
length of database: 191,569,459
effective HSP length: 117
effective length of query: 206
effective length of database: 128,434,387
effective search space: 26457483722
effective search space used: 26457483722
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)