Query 020649
Match_columns 323
No_of_seqs 264 out of 1446
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 04:04:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020649.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020649hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02280 IAA-amino acid hydrol 100.0 1.7E-50 3.7E-55 389.9 34.9 280 43-322 80-359 (478)
2 PLN02693 IAA-amino acid hydrol 100.0 1E-49 2.2E-54 381.9 34.8 270 51-322 38-307 (437)
3 TIGR01891 amidohydrolases amid 100.0 6.5E-46 1.4E-50 349.1 31.0 260 63-322 2-263 (363)
4 COG1473 AbgB Metal-dependent a 100.0 5.1E-45 1.1E-49 340.3 30.8 266 58-323 10-278 (392)
5 PRK06915 acetylornithine deace 100.0 9.7E-45 2.1E-49 347.6 32.0 265 46-322 5-307 (422)
6 PRK08588 succinyl-diaminopimel 100.0 8.8E-45 1.9E-49 343.0 30.8 254 60-322 2-269 (377)
7 PRK06837 acetylornithine deace 100.0 8.8E-43 1.9E-47 334.4 31.4 266 45-322 7-312 (427)
8 PRK13013 succinyl-diaminopimel 100.0 1E-42 2.2E-47 334.1 31.8 256 58-322 12-314 (427)
9 PRK13004 peptidase; Reviewed 100.0 4.2E-42 9.1E-47 327.1 32.3 263 47-321 4-278 (399)
10 TIGR01910 DapE-ArgE acetylorni 100.0 1.6E-42 3.4E-47 327.5 26.8 252 64-322 2-278 (375)
11 PRK06133 glutamate carboxypept 100.0 1E-41 2.2E-46 325.3 32.0 260 49-323 28-301 (410)
12 TIGR03320 ygeY M20/DapE family 100.0 1E-41 2.2E-46 324.0 31.1 255 58-322 11-277 (395)
13 TIGR03526 selenium_YgeY putati 100.0 1.2E-41 2.7E-46 323.5 31.3 255 58-322 11-277 (395)
14 PRK07338 hypothetical protein; 100.0 1.8E-41 3.9E-46 323.1 31.7 260 48-323 7-294 (402)
15 PRK13983 diaminopimelate amino 100.0 1.2E-41 2.6E-46 323.9 29.5 260 58-322 3-296 (400)
16 PRK08596 acetylornithine deace 100.0 2.3E-41 5E-46 324.0 30.8 254 58-322 11-298 (421)
17 PRK13009 succinyl-diaminopimel 100.0 3.6E-41 7.8E-46 318.1 30.1 258 61-322 3-275 (375)
18 PRK05111 acetylornithine deace 100.0 3.3E-41 7.1E-46 319.3 29.8 250 60-322 5-281 (383)
19 PRK07522 acetylornithine deace 100.0 1.9E-41 4.2E-46 321.0 28.2 252 60-322 4-278 (385)
20 TIGR01892 AcOrn-deacetyl acety 100.0 3.2E-41 7E-46 317.1 28.7 246 65-322 2-268 (364)
21 TIGR01246 dapE_proteo succinyl 100.0 2.7E-41 5.9E-46 318.5 28.3 255 63-322 2-272 (370)
22 TIGR01880 Ac-peptdase-euk N-ac 100.0 4.7E-41 1E-45 320.0 29.7 260 60-323 9-294 (400)
23 TIGR01900 dapE-gram_pos succin 100.0 3.3E-41 7.2E-46 318.0 27.8 249 65-321 1-276 (373)
24 PRK09133 hypothetical protein; 100.0 9.5E-41 2.1E-45 324.2 29.6 260 58-323 35-365 (472)
25 PRK08201 hypothetical protein; 100.0 6.4E-41 1.4E-45 324.1 28.1 270 48-322 4-347 (456)
26 PRK06446 hypothetical protein; 100.0 4.2E-41 9.1E-46 323.5 26.5 258 60-322 2-328 (436)
27 PRK07907 hypothetical protein; 100.0 1.8E-40 4E-45 320.3 29.6 265 49-322 9-339 (449)
28 PRK13007 succinyl-diaminopimel 100.0 4.3E-40 9.3E-45 308.2 30.4 249 58-323 5-264 (352)
29 PRK07473 carboxypeptidase; Pro 100.0 4.4E-39 9.5E-44 303.8 31.3 248 59-321 10-273 (376)
30 PRK08651 succinyl-diaminopimel 100.0 3.1E-39 6.6E-44 306.9 29.3 252 58-322 4-286 (394)
31 PRK09104 hypothetical protein; 100.0 3.4E-39 7.5E-44 312.7 29.2 268 49-322 8-355 (464)
32 PRK07906 hypothetical protein; 100.0 3E-39 6.4E-44 310.0 27.8 254 63-322 2-321 (426)
33 PRK08737 acetylornithine deace 100.0 5.5E-39 1.2E-43 301.6 28.3 241 58-322 4-265 (364)
34 PRK08262 hypothetical protein; 100.0 4.1E-39 8.8E-44 313.9 26.6 260 59-323 43-378 (486)
35 PRK00466 acetyl-lysine deacety 100.0 4.7E-38 1E-42 293.9 29.1 236 58-322 8-247 (346)
36 PRK07079 hypothetical protein; 100.0 5E-38 1.1E-42 304.9 29.9 268 46-322 7-350 (469)
37 PRK08652 acetylornithine deace 100.0 4.4E-38 9.5E-43 293.9 27.0 240 60-322 2-247 (347)
38 PRK04443 acetyl-lysine deacety 100.0 1.3E-37 2.8E-42 291.2 29.0 240 60-322 6-252 (348)
39 PRK07205 hypothetical protein; 100.0 4.9E-37 1.1E-41 296.1 29.2 256 57-322 8-344 (444)
40 TIGR01886 dipeptidase dipeptid 100.0 5.6E-37 1.2E-41 296.8 29.4 255 58-323 11-368 (466)
41 COG0624 ArgE Acetylornithine d 100.0 1.5E-36 3.2E-41 289.9 29.0 260 58-322 11-302 (409)
42 TIGR01883 PepT-like peptidase 100.0 6.5E-37 1.4E-41 287.7 26.1 243 62-322 2-261 (361)
43 PRK07318 dipeptidase PepV; Rev 100.0 3.5E-36 7.6E-41 291.7 27.2 255 58-322 12-367 (466)
44 PRK13381 peptidase T; Provisio 100.0 7.5E-36 1.6E-40 284.6 27.1 245 62-322 3-297 (404)
45 TIGR01902 dapE-lys-deAc N-acet 100.0 6.3E-35 1.4E-39 271.7 27.6 231 65-320 2-236 (336)
46 PRK05469 peptidase T; Provisio 100.0 8E-35 1.7E-39 277.9 26.9 247 60-322 2-299 (408)
47 TIGR01887 dipeptidaselike dipe 100.0 5.7E-34 1.2E-38 274.1 28.8 251 60-321 2-353 (447)
48 PRK06156 hypothetical protein; 100.0 6.6E-34 1.4E-38 278.7 29.6 254 57-322 43-412 (520)
49 PRK15026 aminoacyl-histidine d 100.0 6.4E-34 1.4E-38 275.4 28.1 243 60-322 10-287 (485)
50 TIGR01882 peptidase-T peptidas 100.0 3E-34 6.5E-39 273.9 24.3 248 60-322 3-301 (410)
51 PRK12893 allantoate amidohydro 100.0 2.2E-33 4.8E-38 268.3 28.4 243 60-322 10-307 (412)
52 PRK12892 allantoate amidohydro 100.0 1.7E-33 3.7E-38 269.1 27.2 243 60-322 10-308 (412)
53 KOG2275 Aminoacylase ACY1 and 100.0 3.1E-33 6.7E-38 254.4 24.7 259 60-322 25-311 (420)
54 PRK09290 allantoate amidohydro 100.0 3.3E-33 7.1E-38 267.1 26.3 241 60-322 7-308 (413)
55 TIGR01893 aa-his-dipept aminoa 100.0 8.4E-33 1.8E-37 268.7 27.8 244 60-322 4-281 (477)
56 KOG2276 Metalloexopeptidases [ 100.0 6.3E-33 1.4E-37 250.1 23.6 266 49-322 7-361 (473)
57 PRK12891 allantoate amidohydro 100.0 4.8E-32 1E-36 259.1 29.1 227 75-322 35-307 (414)
58 PRK12890 allantoate amidohydro 100.0 4.8E-32 1E-36 259.2 27.7 230 71-322 29-309 (414)
59 TIGR01879 hydantase amidase, h 100.0 2E-30 4.4E-35 247.0 27.8 229 74-322 25-300 (401)
60 PRK08554 peptidase; Reviewed 100.0 8.5E-30 1.8E-34 244.7 24.5 254 62-322 3-336 (438)
61 TIGR03176 AllC allantoate amid 100.0 7.3E-29 1.6E-33 236.2 28.3 226 76-322 29-301 (406)
62 PRK13590 putative bifunctional 100.0 1.4E-28 3E-33 244.0 28.6 242 56-322 177-484 (591)
63 PRK13799 unknown domain/N-carb 100.0 1.9E-28 4E-33 242.8 29.0 244 56-322 177-486 (591)
64 COG4187 RocB Arginine degradat 99.8 1.2E-18 2.6E-23 159.5 15.6 260 60-321 8-321 (553)
65 PF07687 M20_dimer: Peptidase 99.7 1.9E-17 4.2E-22 129.1 10.6 98 226-323 3-105 (111)
66 PRK10199 alkaline phosphatase 99.7 3.7E-16 8E-21 143.3 16.4 131 60-195 35-188 (346)
67 PF01546 Peptidase_M20: Peptid 99.6 8.1E-16 1.8E-20 131.0 8.6 76 119-196 1-85 (189)
68 COG2195 PepD Di- and tripeptid 99.5 4.4E-14 9.5E-19 132.8 11.3 250 59-322 4-306 (414)
69 TIGR03106 trio_M42_hydro hydro 99.5 2.2E-13 4.9E-18 126.4 15.0 129 60-189 3-223 (343)
70 PRK09961 exoaminopeptidase; Pr 99.3 5.9E-11 1.3E-15 110.5 16.0 142 64-211 4-224 (344)
71 COG1363 FrvX Cellulase M and r 99.3 6.6E-11 1.4E-15 109.1 14.0 145 60-210 2-237 (355)
72 TIGR03107 glu_aminopep glutamy 99.3 1.6E-10 3.5E-15 107.5 16.0 142 64-211 2-236 (350)
73 PRK09864 putative peptidase; P 99.2 3.2E-10 7E-15 105.4 15.8 140 63-211 3-231 (356)
74 KOG2194 Aminopeptidases of the 98.8 2.6E-08 5.7E-13 99.6 10.7 132 62-208 59-224 (834)
75 PF04389 Peptidase_M28: Peptid 98.4 4.3E-07 9.3E-12 76.7 5.5 81 117-208 2-88 (179)
76 KOG3946 Glutaminyl cyclase [Po 97.9 0.00019 4E-09 63.4 11.5 106 79-195 71-200 (338)
77 PF05343 Peptidase_M42: M42 gl 97.9 8.7E-05 1.9E-09 67.7 9.3 63 143-210 126-191 (292)
78 COG2234 Iap Predicted aminopep 97.3 0.00084 1.8E-08 64.8 8.2 65 114-197 207-275 (435)
79 KOG2526 Predicted aminopeptida 96.9 0.016 3.5E-07 54.4 12.2 96 103-209 193-305 (555)
80 KOG2195 Transferrin receptor a 96.6 0.0059 1.3E-07 61.7 7.8 77 103-195 338-420 (702)
81 PF05450 Nicastrin: Nicastrin; 95.7 0.039 8.5E-07 48.7 7.0 66 116-194 1-73 (234)
82 PRK00913 multifunctional amino 94.5 0.79 1.7E-05 44.8 12.8 127 58-188 169-313 (483)
83 cd00433 Peptidase_M17 Cytosol 94.1 1.5 3.3E-05 42.7 14.0 128 58-187 152-298 (468)
84 PF00883 Peptidase_M17: Cytoso 93.8 0.69 1.5E-05 42.4 10.3 112 64-185 2-141 (311)
85 PTZ00412 leucyl aminopeptidase 92.7 2.5 5.3E-05 41.8 12.7 126 58-185 210-355 (569)
86 KOG2597 Predicted aminopeptida 91.9 1.9 4.1E-05 42.0 10.7 127 60-188 189-334 (513)
87 TIGR01893 aa-his-dipept aminoa 91.4 0.36 7.7E-06 47.3 5.6 43 275-323 336-378 (477)
88 PRK05015 aminopeptidase B; Pro 90.7 8.9 0.00019 36.7 13.7 124 60-188 100-250 (424)
89 COG4882 Predicted aminopeptida 85.6 15 0.00032 34.5 11.3 71 104-195 179-259 (486)
90 KOG3566 Glycosylphosphatidylin 83.9 12 0.00025 37.1 10.4 90 84-195 92-193 (617)
91 COG0260 PepB Leucyl aminopepti 81.5 34 0.00074 33.6 12.7 124 59-187 166-311 (485)
92 PRK02256 putative aminopeptida 75.5 5.7 0.00012 38.7 5.4 42 142-187 251-294 (462)
93 PF04114 Gaa1: Gaa1-like, GPI 74.7 35 0.00076 33.8 10.8 72 103-195 3-77 (504)
94 PF06675 DUF1177: Protein of u 63.1 1.1E+02 0.0024 27.2 10.0 85 114-208 30-129 (276)
95 COG2195 PepD Di- and tripeptid 48.4 22 0.00047 34.2 3.8 68 116-190 62-139 (414)
96 PRK15026 aminoacyl-histidine d 44.7 43 0.00093 32.9 5.4 40 277-322 344-383 (485)
97 COG4635 HemG Flavodoxin [Energ 43.7 15 0.00033 30.3 1.7 32 70-101 5-36 (175)
98 PRK02813 putative aminopeptida 42.5 35 0.00075 33.0 4.2 49 79-127 21-88 (428)
99 PRK02813 putative aminopeptida 42.0 97 0.0021 30.0 7.2 34 152-190 237-274 (428)
100 PTZ00371 aspartyl aminopeptida 40.6 48 0.001 32.4 4.9 45 143-187 243-290 (465)
101 PF09940 DUF2172: Domain of un 37.1 1.1E+02 0.0025 28.9 6.5 87 87-195 96-187 (386)
102 PRK02256 putative aminopeptida 35.8 1.8E+02 0.004 28.4 8.1 60 65-128 31-106 (462)
103 PTZ00371 aspartyl aminopeptida 35.2 1.5E+02 0.0034 29.0 7.5 51 78-128 21-91 (465)
104 PF14133 DUF4300: Domain of un 31.8 2.5E+02 0.0054 25.1 7.6 61 66-128 132-193 (250)
105 PRK06156 hypothetical protein; 26.4 63 0.0014 32.0 3.2 25 278-302 240-264 (520)
106 COG1362 LAP4 Aspartyl aminopep 25.0 83 0.0018 30.2 3.5 33 154-187 243-275 (437)
107 PF14000 Packaging_FI: DNA pac 23.0 1.7E+02 0.0036 23.1 4.3 39 56-94 3-41 (125)
108 COG1362 LAP4 Aspartyl aminopep 23.0 2.1E+02 0.0045 27.6 5.7 50 78-127 22-90 (437)
109 PF03668 ATP_bind_2: P-loop AT 22.9 1.3E+02 0.0029 27.3 4.3 30 278-308 161-190 (284)
110 PF01221 Dynein_light: Dynein 22.5 1.5E+02 0.0034 21.5 4.0 35 60-97 19-54 (89)
111 PF08854 DUF1824: Domain of un 21.2 3.5E+02 0.0077 21.3 5.8 48 80-127 48-110 (125)
No 1
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=1.7e-50 Score=389.86 Aligned_cols=280 Identities=63% Similarity=1.045 Sum_probs=252.8
Q ss_pred hhHHHHHHHHhcchhhHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEe
Q 020649 43 SSIKSRIIELANDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRA 122 (323)
Q Consensus 43 ~~~~~~i~~~~~~~~~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~ 122 (323)
..-.+.+.-....++..+++.++.++++++|+++++|.++++||.++|+++|++++....++|++|+++++++|+|+|.|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~g 159 (478)
T PLN02280 80 KACSEAVLRLAYQPDTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRA 159 (478)
T ss_pred hhhhHHHHHhhhhHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEE
Confidence 44445555555566788999999999999999999999999999999999999988766788999999644458999999
Q ss_pred ccCcccCcCCCCCccCCcCCCeEeeCCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCCcHHHHHhcCccCCcc
Q 020649 123 DMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENVE 202 (323)
Q Consensus 123 H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d 202 (323)
|||+||+++..+|+++|+++|++||||+|+++|++++++++|++.+.+++++|.|+|++|||.|.|++.++++|.+++.|
T Consensus 160 h~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d 239 (478)
T PLN02280 160 DMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVE 239 (478)
T ss_pred ecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCC
Confidence 99999998888899999999999999999999999999999998877889999999999999988999999999888889
Q ss_pred EEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEE
Q 020649 203 AIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVA 282 (323)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~ 282 (323)
+++++|+.+..|.+.++.+.+...+|..+++|+++|+++|++.|+.|+||+..+++++..++++..+..++....++|++
T Consensus 240 ~~~~~h~~~~~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg 319 (478)
T PLN02280 240 AIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVT 319 (478)
T ss_pred EEEEEecCCCCCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEE
Confidence 99999987777878777777777889999999999999999999999999999999999999886555555566799999
Q ss_pred EEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 283 MINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 283 ~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
.|+||...|+||++|++++|+|++|..+.+++.++|++++
T Consensus 320 ~I~GG~~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~ 359 (478)
T PLN02280 320 TMDGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVI 359 (478)
T ss_pred EEEccCCCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999876
No 2
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=1e-49 Score=381.95 Aligned_cols=270 Identities=67% Similarity=1.088 Sum_probs=241.1
Q ss_pred HHhcchhhHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEeccCcccCc
Q 020649 51 ELANDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQ 130 (323)
Q Consensus 51 ~~~~~~~~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~ 130 (323)
+...+.+..+++++++++|+++|++|++|.++++||.++|+++|++++....++|++|+++++++|+|+|.|||||||++
T Consensus 38 ~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i~l~~h~DaVp~~ 117 (437)
T PLN02693 38 ELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFVALRADMDALPIQ 117 (437)
T ss_pred HHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEEEEEeecCCCcCC
Confidence 33333346688999999999999999999999999999999999998754468899999965556999999999999998
Q ss_pred CCCCCccCCcCCCeEeeCCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCCcHHHHHhcCccCCccEEEEEecc
Q 020649 131 ELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLV 210 (323)
Q Consensus 131 ~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~ 210 (323)
+..+|+++|..+|++||||+|+++|++++|+++|++.+..++++|.|+|++|||.+.|++.+++++.+++.|++++.|.+
T Consensus 118 e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~~~iig~h~~ 197 (437)
T PLN02693 118 EAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLS 197 (437)
T ss_pred CCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCCCEEEEEecC
Confidence 88889999999999999999999999999999999887678899999999999965799999999888778899999988
Q ss_pred CCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcC
Q 020649 211 HKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSY 290 (323)
Q Consensus 211 ~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg~~~ 290 (323)
+..+.|.+..+.|..++|..+++|+++|+++|++.|+.|+|||..+++++..|+++..+..++..+.++|+|.|+||...
T Consensus 198 p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~vg~i~GG~~~ 277 (437)
T PLN02693 198 PRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAF 277 (437)
T ss_pred CCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEEEcCCCC
Confidence 88778887788888888999999999999999999999999999999999999998665555666789999999999999
Q ss_pred ccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 291 NMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 291 nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
|+||++|++++|+|+.|.. +.+.++|++++
T Consensus 278 NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~ 307 (437)
T PLN02693 278 NVIPDSITIGGTLRAFTGF--TQLQQRIKEII 307 (437)
T ss_pred ceECCeEEEEEEEecCCHH--HHHHHHHHHHH
Confidence 9999999999999999974 57888888775
No 3
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=6.5e-46 Score=349.09 Aligned_cols=260 Identities=49% Similarity=0.794 Sum_probs=226.8
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEe-ccCCceEEEEECC-CCCCeeEEEeccCcccCcCCCCCccCCc
Q 020649 63 KKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRW-PVAKTGVVATVGS-GSPPFVALRADMDALPIQELVEWEHKSK 140 (323)
Q Consensus 63 ~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~-~~~~~nvia~~~~-~~~~~ill~~H~Dtvp~~~~~~w~~~p~ 140 (323)
.+++++|++|||+|++|.++++||.++|+++|++++. .....|+++++++ .++|+|+|+|||||||+++...+||.+.
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 4678999999999999999999999999999999886 3457899999954 3468999999999999876555677767
Q ss_pred CCCeEeeCCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCCcHHHHHhcCccCCccEEEEEeccCCCCceeEEe
Q 020649 141 IDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVAS 220 (323)
Q Consensus 141 ~~g~l~g~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 220 (323)
+||++||||+|+++++++++++.|++.+..++++|.|+|++|||.+.|++.+++++.+++.|++++++++++.+.+.+..
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999999999999999988776788999999999999988999999888777789999988777666666555
Q ss_pred eeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccceEEEE
Q 020649 221 RPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVA 300 (323)
Q Consensus 221 ~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg~~~nviP~~a~~~ 300 (323)
..+..++|..+++|+++|+++|++.|+.|+||+..+++++.+++++..+........++|++.++||...|+||++|+++
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 55666789999999999999999999999999999999999998864332233345689999999999999999999999
Q ss_pred EEEeccChhhHHHHHHHHHHHh
Q 020649 301 GTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 301 ~diR~~~~~~~~~~~~~i~~~i 322 (323)
+|+|+.|.++.+++.++|++++
T Consensus 242 ~diR~~~~~~~e~~~~~i~~~~ 263 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIERIV 263 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHHHH
Confidence 9999999999999999998875
No 4
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=5.1e-45 Score=340.31 Aligned_cols=266 Identities=49% Similarity=0.759 Sum_probs=250.2
Q ss_pred hHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEecc-CCceEEEEEC-CCCCCeeEEEeccCcccCcCCCCC
Q 020649 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-AKTGVVATVG-SGSPPFVALRADMDALPIQELVEW 135 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~-~~~~~~ill~~H~Dtvp~~~~~~w 135 (323)
+.+++++++|+|+++|+.+.+|.++++||+++|+++|+++.... .++.++|.++ ++++|+|.|.+.||.+|..+.+++
T Consensus 10 ~~~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DALPi~E~t~~ 89 (392)
T COG1473 10 LKDELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDALPIQEETGL 89 (392)
T ss_pred hhHHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecccCccccccCC
Confidence 56889999999999999999999999999999999999954443 3689999995 456689999999999999999999
Q ss_pred ccCCcCCCeEeeCCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCCcHHHHHhcCccCC-ccEEEEEeccCCCC
Q 020649 136 EHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLEN-VEAIFGLHLVHKYP 214 (323)
Q Consensus 136 ~~~p~~~g~l~g~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~-~d~~~~~~~~~~~~ 214 (323)
||.+..+|++|+||++++.+++|+++++|++...+++++|+|+|+++||+++|++.++++|.+++ +|+++++|+.|+.|
T Consensus 90 ~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~H~~p~~~ 169 (392)
T COG1473 90 PFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGLHPGPGLP 169 (392)
T ss_pred CcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEecCCCCCC
Confidence 99999999999999999999999999999988778999999999999999989999999999999 99999999988878
Q ss_pred ceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCcccc
Q 020649 215 TGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIP 294 (323)
Q Consensus 215 ~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg~~~nviP 294 (323)
.|.+..++|...++...++++++|+++|++.|+.++||+.+++.++..|+.+.+|..+|..+.+++++.++||.+.||||
T Consensus 170 ~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG~a~NVIp 249 (392)
T COG1473 170 VGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAGTAANVIP 249 (392)
T ss_pred CceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCCCcCCcCC
Confidence 89999999988889999999999999999999999999999999999999999998898888999999999999999999
Q ss_pred ceEEEEEEEeccChhhHHHHHHHHHHHhC
Q 020649 295 DSATVAGTFRAFNKKRFNALRERIEEVLI 323 (323)
Q Consensus 295 ~~a~~~~diR~~~~~~~~~~~~~i~~~i~ 323 (323)
+++++..++|.......+.+.++++++++
T Consensus 250 d~A~l~gtvR~~~~~~~~~~~~~i~~ia~ 278 (392)
T COG1473 250 DSAELEGTIRTFSDEVREKLEARIERIAK 278 (392)
T ss_pred CeeEEEEEeecCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999864
No 5
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=9.7e-45 Score=347.64 Aligned_cols=265 Identities=21% Similarity=0.287 Sum_probs=221.4
Q ss_pred HHHHHHHhcchhhHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEec--------------------cCCce
Q 020649 46 KSRIIELANDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP--------------------VAKTG 105 (323)
Q Consensus 46 ~~~i~~~~~~~~~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--------------------~~~~n 105 (323)
.+++.+.+++ ..+++++++++|++|||++++|.++++||+++|+++|++++.. +.++|
T Consensus 5 ~~~~~~~~~~--~~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 82 (422)
T PRK06915 5 KKQICDYIES--HEEEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSPN 82 (422)
T ss_pred HHHHHHHHHh--hHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCce
Confidence 4555565543 5578999999999999999999999999999999999998632 24689
Q ss_pred EEEEEC-CCCCCeeEEEeccCcccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEE
Q 020649 106 VVATVG-SGSPPFVALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVL 177 (323)
Q Consensus 106 via~~~-~~~~~~ill~~H~Dtvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~ 177 (323)
|+|+++ .+++|+|+|+|||||||+++.+.|+++| ++||+|||||+ ||+++++|.|+++|++.+.+++++|.|
T Consensus 83 lia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~ 162 (422)
T PRK06915 83 IVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIF 162 (422)
T ss_pred EEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 999994 4456899999999999999888996665 47999999998 799999999999999988788899999
Q ss_pred EeEcCCCCCC-cHHHHHhcCccCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHH
Q 020649 178 IFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAV 256 (323)
Q Consensus 178 ~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~ 256 (323)
+|++|||.|+ |+..++.+++ +.|+++.. +|+.. .+ ...++|..+++|+++|+++|+|.|+.|+||+..+
T Consensus 163 ~~~~dEE~g~~G~~~~~~~~~--~~d~~i~~--ep~~~--~i----~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~~ 232 (422)
T PRK06915 163 QSVIEEESGGAGTLAAILRGY--KADGAIIP--EPTNM--KF----FPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEKS 232 (422)
T ss_pred EEecccccCCcchHHHHhcCc--CCCEEEEC--CCCCc--cc----eeecccEEEEEEEEEeeccccCCCCcCcCHHHHH
Confidence 9999999874 8888887764 46887764 33321 11 2345699999999999999999999999999999
Q ss_pred HHHHHHHHHhhcc----ccCCC-----CCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 257 SSSVISLQNIVSR----EIDPL-----DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 257 ~~~i~~l~~~~~~----~~~~~-----~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
++++..|+++..+ ...+. .+.++|++.|+||...|+||++|++.+|+|+.|+++.+++.++|++.+
T Consensus 233 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l 307 (422)
T PRK06915 233 MFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWI 307 (422)
T ss_pred HHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 9999999887532 11111 245899999999999999999999999999999999999999888765
No 6
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=8.8e-45 Score=343.03 Aligned_cols=254 Identities=22% Similarity=0.327 Sum_probs=219.9
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEec---cCCceEEEEECCCCCCeeEEEeccCcccCcCCCCCc
Q 020649 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP---VAKTGVVATVGSGSPPFVALRADMDALPIQELVEWE 136 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~---~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~ 136 (323)
++.++++++|+++||++++|.++++||.++|+++|++++.. +.+.|++++++++ .|+|+|++||||||+++.+.|.
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~-~~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSG-SPVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCC-CceEEEEeeecccCCCCcccCc
Confidence 45788999999999999999999999999999999998754 3568999999654 4899999999999998888997
Q ss_pred cCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEe
Q 020649 137 HKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLH 208 (323)
Q Consensus 137 ~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~ 208 (323)
++| ++||+|||||+ |++++++|.|++.|++.+..++++|.|+|++|||.| .|++.++++++++++|++++.+
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~e 160 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGE 160 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEec
Confidence 776 57899999998 899999999999999988888899999999999988 5999999998777788877653
Q ss_pred ccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhcccc---CCCCCceEEEEEEE
Q 020649 209 LVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI---DPLDSQVVSVAMIN 285 (323)
Q Consensus 209 ~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~---~~~~~~~~~i~~i~ 285 (323)
|+...-.+ .++|..+++|+++|+++|+|.|+.|.||+..+++++..++++..+.. +..+..++|++.++
T Consensus 161 --p~~~~i~~------~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 161 --PSGHGIVY------AHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred --CCCceeEE------EEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 33221122 23599999999999999999999999999999999999988653321 23456799999999
Q ss_pred cCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 286 GGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 286 gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
||...|+||++|++++|+|+.|+++.+++.++|++++
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~ 269 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEII 269 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999876
No 7
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=8.8e-43 Score=334.42 Aligned_cols=266 Identities=18% Similarity=0.191 Sum_probs=220.7
Q ss_pred HHHHHHHHhcchhhHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEec--------------------cCCc
Q 020649 45 IKSRIIELANDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP--------------------VAKT 104 (323)
Q Consensus 45 ~~~~i~~~~~~~~~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--------------------~~~~ 104 (323)
+.+++.+.+++ ..++++++++++++|||++++|.++++||.++|+++|++++.. ++++
T Consensus 7 ~~~~~~~~i~~--~~~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
T PRK06837 7 LTQRILAAVDA--GFDAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAP 84 (427)
T ss_pred HHHHHHHHHHh--hhHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCc
Confidence 34445555543 5588999999999999999999999999999999999997642 2468
Q ss_pred eEEEEEC-CC-CCCeeEEEeccCcccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEE
Q 020649 105 GVVATVG-SG-SPPFVALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTV 175 (323)
Q Consensus 105 nvia~~~-~~-~~~~ill~~H~Dtvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i 175 (323)
||+++++ .+ ++|+|+|+|||||||+++.+.|.++| ++||+|||||+ |++++++|.|++++++.+..++++|
T Consensus 85 nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i 164 (427)
T PRK06837 85 NVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARV 164 (427)
T ss_pred eEEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcE
Confidence 9999994 33 36899999999999998878898777 57999999998 8999999999999999888889999
Q ss_pred EEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHH
Q 020649 176 VLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPIL 254 (323)
Q Consensus 176 ~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~ 254 (323)
.|+|+++||.+ +|+..++..++ ..|++++. +|+.+... ..++|..+++|+++|+++|+|.|+.|.||+.
T Consensus 165 ~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~--ep~~~~i~------~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~ 234 (427)
T PRK06837 165 HFQSVIEEESTGNGALSTLQRGY--RADACLIP--EPTGEKLV------RAQVGVIWFRLRVRGAPVHVREAGTGANAID 234 (427)
T ss_pred EEEEEeccccCCHhHHHHHhcCc--CCCEEEEc--CCCCCccc------cccceeEEEEEEEEeeccccCCcccCcCHHH
Confidence 99999999976 58888877765 46877765 34322212 2245999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccc-----cC-----CCCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 255 AVSSSVISLQNIVSRE-----ID-----PLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 255 ~~~~~i~~l~~~~~~~-----~~-----~~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
.+++++..|+++.... .. ...+.++|++.|+||...|+||++|++.+++|++|+++++++.++|++++
T Consensus 235 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~ 312 (427)
T PRK06837 235 AAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACL 312 (427)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHH
Confidence 9999999998764211 00 11245899999999999999999999999999999999999999998875
No 8
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1e-42 Score=334.11 Aligned_cols=256 Identities=14% Similarity=0.189 Sum_probs=211.0
Q ss_pred hHHHHHHHHHHHhcCCCCC--c-ccHHHHHHHHHHHHHcCCcEEeccC-----------CceEEEEEC-CCCCCeeEEEe
Q 020649 58 TVNWMKKMRRQIHENPELA--Y-EEFETSELIRRELDQLGIAYRWPVA-----------KTGVVATVG-SGSPPFVALRA 122 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s--~-~e~~~~~~l~~~l~~~G~~~~~~~~-----------~~nvia~~~-~~~~~~ill~~ 122 (323)
+.+++++++++|++|||.+ + +|+++++||.++|+++|++++.... ++|++|+++ ++++|+|+|+|
T Consensus 12 ~~~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~~~~~i~l~g 91 (427)
T PRK13013 12 RRDDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGARDGDCVHFNS 91 (427)
T ss_pred hHHHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCCCCCCEEEEEe
Confidence 5678999999999999986 3 5689999999999999999875421 469999994 44568999999
Q ss_pred ccCcccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC--cHHHHH
Q 020649 123 DMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDMI 193 (323)
Q Consensus 123 H~Dtvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~~ 193 (323)
||||||++ +.|.++| ++||+|||||+ |++++++|+|+++|++.+.+++++|.|+|+++||.|+ |...++
T Consensus 92 H~DvVp~~--~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~l~ 169 (427)
T PRK13013 92 HHDVVEVG--HGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESGGFGGVAYLA 169 (427)
T ss_pred ccccCCCC--CCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCChhHHHHHH
Confidence 99999986 3686665 57999999998 8999999999999999887888999999999999873 778888
Q ss_pred hcCccC--CccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccc-
Q 020649 194 QEGVLE--NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE- 270 (323)
Q Consensus 194 ~~~~~~--~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~- 270 (323)
+++.++ ++|++++.+ |+.. ..+. ..++|..+++|+++|+++|++.|+.|+||+..++++|..|++...+.
T Consensus 170 ~~~~~~~~~~d~~i~~e--p~~~-~~i~----~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~l~~~~~~~~ 242 (427)
T PRK13013 170 EQGRFSPDRVQHVIIPE--PLNK-DRIC----LGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAEIEERLFPLL 242 (427)
T ss_pred hcCCccccCCCEEEEec--CCCC-CceE----EeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHHHHHHhhhhh
Confidence 887665 468877653 3321 1121 22459999999999999999999999999999999999997653110
Q ss_pred ----c------CCCCCceEEEEEEEcCCcC----------ccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 271 ----I------DPLDSQVVSVAMINGGSSY----------NMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 271 ----~------~~~~~~~~~i~~i~gg~~~----------nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
. +....+++|++.|+||... |+||++|++++|+|++|+++.+++.++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~i 314 (427)
T PRK13013 243 ATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITALL 314 (427)
T ss_pred hcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 0 0113578999999999776 99999999999999999999999999998875
No 9
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=4.2e-42 Score=327.06 Aligned_cols=263 Identities=18% Similarity=0.221 Sum_probs=220.2
Q ss_pred HHHHHHhcchhhHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEeccCc
Q 020649 47 SRIIELANDQDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDA 126 (323)
Q Consensus 47 ~~i~~~~~~~~~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dt 126 (323)
+.+.+++++ +.+++++++++++++|+++++|.++++||.++|+++|+++...+..+|++++++++ .|+|+|++|+||
T Consensus 4 ~~~~~~~~~--~~~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~-~~~i~~~~H~Dt 80 (399)
T PRK13004 4 KLILMLAEK--YKADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHG-KKLIAFDAHIDT 80 (399)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCC-CcEEEEEeccCc
Confidence 455566643 66889999999999999999999999999999999999865555577999998654 389999999999
Q ss_pred ccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC--CcHHHHHhcCc
Q 020649 127 LPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG--TGAKDMIQEGV 197 (323)
Q Consensus 127 vp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g--~G~~~~~~~~~ 197 (323)
||+++.++|.++| ++||+|||||+ |++++++|+|++.|++.+..++++|.|+|+++||.+ .|++.++++..
T Consensus 81 Vp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~ 160 (399)
T PRK13004 81 VGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDK 160 (399)
T ss_pred cCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcC
Confidence 9998877898877 46899999998 899999999999999988888999999999999975 36778887643
Q ss_pred cCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhcc--ccCCCC
Q 020649 198 LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR--EIDPLD 275 (323)
Q Consensus 198 ~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~--~~~~~~ 275 (323)
+ +.|++++.+ ++.. .+. ..++|..+++|+++|+++|++.|+.|+||+..+++++..|+.+... .....+
T Consensus 161 ~-~~d~~i~~e--~~~~--~i~----~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 231 (399)
T PRK13004 161 I-KPDFVVITE--PTDL--NIY----RGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLG 231 (399)
T ss_pred C-CCCEEEEcc--CCCC--ceE----EecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCC
Confidence 4 478888764 3322 221 1235999999999999999999999999999999999999887533 222234
Q ss_pred CceEEEEEEEcC-CcCccccceEEEEEEEeccChhhHHHHHHHHHHH
Q 020649 276 SQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEV 321 (323)
Q Consensus 276 ~~~~~i~~i~gg-~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~ 321 (323)
..+++++.+.+| .+.|+||++|++++|+|++|.++.+++.++++++
T Consensus 232 ~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~ 278 (399)
T PRK13004 232 KGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRAL 278 (399)
T ss_pred CceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHH
Confidence 568999999876 4899999999999999999999999999999876
No 10
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=1.6e-42 Score=327.50 Aligned_cols=252 Identities=20% Similarity=0.315 Sum_probs=211.2
Q ss_pred HHHHHHhcCCC---CCcccHHHHHHHHHHHHHcCCcEEecc---CCc----eEEEEE-CCCCCCeeEEEeccCcccCcCC
Q 020649 64 KMRRQIHENPE---LAYEEFETSELIRRELDQLGIAYRWPV---AKT----GVVATV-GSGSPPFVALRADMDALPIQEL 132 (323)
Q Consensus 64 ~l~~~l~~ips---~s~~e~~~~~~l~~~l~~~G~~~~~~~---~~~----nvia~~-~~~~~~~ill~~H~Dtvp~~~~ 132 (323)
+++++|+++|| ++++|.++++||.++|+++|++++..+ ... |+++.+ +.+++|+|+|++||||||+++.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 56889999999 888999999999999999999987532 223 355555 5445689999999999999888
Q ss_pred CCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCccEE
Q 020649 133 VEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAI 204 (323)
Q Consensus 133 ~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~ 204 (323)
++|.++| +++|++||||+ |++++++|++++.|++.+..++++|.|+|+++||.| .|++.+++++.+++.|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 8997776 57899999998 899999999999999888778999999999999988 499999998777668888
Q ss_pred EEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhcccc------CCCCCce
Q 020649 205 FGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI------DPLDSQV 278 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~------~~~~~~~ 278 (323)
++.+ ++. .+.+. ..++|..+++|+++|+++|+|.|+.|.||+..++++|..|+++..... .....++
T Consensus 162 i~~~--~~~-~~~v~----~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t 234 (375)
T TIGR01910 162 LIPE--PSG-GDNIV----IGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPIT 234 (375)
T ss_pred EECC--CCC-CCceE----EEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcc
Confidence 7653 331 12222 123589999999999999999999999999999999999988753211 1223578
Q ss_pred EEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 279 VSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 279 ~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
+|++.++||...|+||++|++++|+|+.|.++.+++.++|++++
T Consensus 235 ~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~ 278 (375)
T TIGR01910 235 FNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVV 278 (375)
T ss_pred ccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999876
No 11
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=1e-41 Score=325.34 Aligned_cols=260 Identities=20% Similarity=0.299 Sum_probs=217.6
Q ss_pred HHHHhcchhhHHHHHHHHHHHhcCCCCCccc---HHHHHHHHHHHHHcCCcEEecc----CCceEEEEECCCCCCeeEEE
Q 020649 49 IIELANDQDTVNWMKKMRRQIHENPELAYEE---FETSELIRRELDQLGIAYRWPV----AKTGVVATVGSGSPPFVALR 121 (323)
Q Consensus 49 i~~~~~~~~~~~~l~~l~~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~----~~~nvia~~~~~~~~~ill~ 121 (323)
+.+++++ ..++++++++++++|||.+++| .++++||.++|+++|++++..+ .++|++|++++.++|+|+|+
T Consensus 28 ~~~~~~~--~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~ill~ 105 (410)
T PRK06133 28 LLAAAQQ--EQPAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRIMLI 105 (410)
T ss_pred HHHHHHH--hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceEEEE
Confidence 4444433 6688999999999999999765 4899999999999999987643 35799999954446899999
Q ss_pred eccCcccCcCCCCCccCC--cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhc
Q 020649 122 ADMDALPIQELVEWEHKS--KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQE 195 (323)
Q Consensus 122 ~H~Dtvp~~~~~~w~~~p--~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~ 195 (323)
|||||||++. .|.++| +++|++||||+ |++++++|++++.|++.+..++++|.|+|+++||.| .|++.++++
T Consensus 106 ~H~D~Vp~~~--~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~ 183 (410)
T PRK06133 106 AHMDTVYLPG--MLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSRELIAE 183 (410)
T ss_pred eecCccCCCC--ccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHHHHH
Confidence 9999999853 487777 67899999997 899999999999999888778899999999999988 499999976
Q ss_pred CccCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccC-CCCCCCCHHHHHHHHHHHHHHhhccccCCC
Q 020649 196 GVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPL 274 (323)
Q Consensus 196 ~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~ 274 (323)
.. .+.|++++.+ |+.+.+.+.. .++|..+++++++|+++|+| .|+.|.||+..+++++..|+++.. +.
T Consensus 184 ~~-~~~d~~i~~e--p~~~~~~v~~----~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~----~~ 252 (410)
T PRK06133 184 LA-AQHDVVFSCE--PGRAKDALTL----ATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGD----PA 252 (410)
T ss_pred Hh-ccCCEEEEeC--CCCCCCCEEE----eccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccC----CC
Confidence 33 3578888875 4433233322 23589999999999999986 799999999999999999988632 22
Q ss_pred CCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHhC
Q 020649 275 DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVLI 323 (323)
Q Consensus 275 ~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i~ 323 (323)
...+++++.++||...|+||++|++.+|+|++|.++.+++.++|+++++
T Consensus 253 ~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~ 301 (410)
T PRK06133 253 KGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVK 301 (410)
T ss_pred CCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHh
Confidence 3468999999999999999999999999999999999999999998763
No 12
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=1e-41 Score=324.04 Aligned_cols=255 Identities=19% Similarity=0.222 Sum_probs=212.6
Q ss_pred hHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEeccCcccCcCCCCCcc
Q 020649 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEH 137 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~ 137 (323)
+.+++++++++|+++||++++|.++++||.++|+++|+++...+...|++++++.+ +|+|+|+|||||||+++.+.|.+
T Consensus 11 ~~~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~~-~~~l~l~~H~DtVp~~~~~~w~~ 89 (395)
T TIGR03320 11 YRGDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTVGIGDSKQWQF 89 (395)
T ss_pred HHHHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCCC-CcEEEEEecccccCCCCcccccc
Confidence 56889999999999999999999999999999999999853334467999998543 58999999999999988889988
Q ss_pred CC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCCc--HHHHHhcCccCCccEEEEEe
Q 020649 138 KS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG--AKDMIQEGVLENVEAIFGLH 208 (323)
Q Consensus 138 ~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G--~~~~~~~~~~~~~d~~~~~~ 208 (323)
+| ++||++||||+ |++++++|.|+++|++.+..++.++.|++++|||.++| .+.++++..+ .+|++++.+
T Consensus 90 ~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~-~~d~~iv~e 168 (395)
T TIGR03320 90 DPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI-KPEFVVITE 168 (395)
T ss_pred CCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC-CCCEEEEcC
Confidence 87 57899999997 99999999999999988877788999999999997654 3566655333 478887753
Q ss_pred ccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccc-cCC-CCCceEEEEEEEc
Q 020649 209 LVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE-IDP-LDSQVVSVAMING 286 (323)
Q Consensus 209 ~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~-~~~~~~~i~~i~g 286 (323)
|+.. .+. ..++|..+++|+++|+++|+|.|+.|.||+..+++++..|+++.... .++ .+..+++++.|++
T Consensus 169 --p~~~--~i~----~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~t~~v~~i~~ 240 (395)
T TIGR03320 169 --PTDM--NIY----RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFF 240 (395)
T ss_pred --CCcc--ceE----EecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCcCceeeeeeec
Confidence 4321 221 12459999999999999999999999999999999999998874322 122 2346899999998
Q ss_pred CC-cCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 287 GS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 287 g~-~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
|. ..|+||++|++++|+|++|+++.+++.++|++++
T Consensus 241 g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~ 277 (395)
T TIGR03320 241 SSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLP 277 (395)
T ss_pred CCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 75 8999999999999999999999999999998864
No 13
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=1.2e-41 Score=323.46 Aligned_cols=255 Identities=18% Similarity=0.207 Sum_probs=213.4
Q ss_pred hHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEeccCcccCcCCCCCcc
Q 020649 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEH 137 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~ 137 (323)
+.+++++++++|+++||++++|.++++||.++|+++|+++...+..+|+++.++.+ .|+|+|++||||||+++.+.|.+
T Consensus 11 ~~~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~DtVp~~~~~~W~~ 89 (395)
T TIGR03526 11 YRGDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTVGIGDMDQWQF 89 (395)
T ss_pred HHHHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeeccccCCCCcccccC
Confidence 56789999999999999999999999999999999999854344457999998543 47999999999999988889988
Q ss_pred CC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC--CcHHHHHhcCccCCccEEEEEe
Q 020649 138 KS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG--TGAKDMIQEGVLENVEAIFGLH 208 (323)
Q Consensus 138 ~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g--~G~~~~~~~~~~~~~d~~~~~~ 208 (323)
+| ++||++||||+ |++++++|.|++.|++.+..++.++.|+++++||.+ .|+..+++++.+ +.|++++.+
T Consensus 90 ~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~-~~d~~i~~e 168 (395)
T TIGR03526 90 DPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI-KPEFVVITE 168 (395)
T ss_pred CCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC-CCCEEEecC
Confidence 87 47899999996 999999999999999887777889999999999954 356777766544 468887653
Q ss_pred ccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccc-cCC-CCCceEEEEEEEc
Q 020649 209 LVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE-IDP-LDSQVVSVAMING 286 (323)
Q Consensus 209 ~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~-~~~~~~~i~~i~g 286 (323)
|+.. .+. ..++|..+++|+++|+++|++.|+.|+||+..+++++..|+.+.... .++ .+..++|++.|+|
T Consensus 169 --p~~~--~i~----~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~v~~i~~ 240 (395)
T TIGR03526 169 --PTDM--NIY----RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGKGTLTVSEIFF 240 (395)
T ss_pred --CCCc--eEE----EEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCccceeeeeeec
Confidence 4321 221 22459999999999999999999999999999999999998875322 122 2356899999998
Q ss_pred CC-cCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 287 GS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 287 g~-~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
|. ..|+||++|++++|+|++|+++.+++.++|++++
T Consensus 241 g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~ 277 (395)
T TIGR03526 241 SSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLP 277 (395)
T ss_pred CCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 75 8999999999999999999999999999998865
No 14
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-41 Score=323.08 Aligned_cols=260 Identities=18% Similarity=0.241 Sum_probs=213.4
Q ss_pred HHHHHhcchhhHHHHHHHHHHHhcCCCCCccc---HHHHHHHHHHHHHcCCcEEecc-----------------CCceEE
Q 020649 48 RIIELANDQDTVNWMKKMRRQIHENPELAYEE---FETSELIRRELDQLGIAYRWPV-----------------AKTGVV 107 (323)
Q Consensus 48 ~i~~~~~~~~~~~~l~~l~~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~-----------------~~~nvi 107 (323)
++.+++++ +.+++++++++++++||.++++ .++++||.++|+++|++++..+ .++||+
T Consensus 7 ~~~~~~~~--~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~ 84 (402)
T PRK07338 7 AVLDLIDD--RQAPMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPALH 84 (402)
T ss_pred HHHHHHhh--hHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCeEE
Confidence 34444432 5688899999999999998764 5799999999999999987532 126999
Q ss_pred EEECCCCCCeeEEEeccCcccCcCCCCCccCC---cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEc
Q 020649 108 ATVGSGSPPFVALRADMDALPIQELVEWEHKS---KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQP 181 (323)
Q Consensus 108 a~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~p---~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 181 (323)
|+++++.+++|+|+|||||||++. .||.+ ++||+|||||+ ||+++++|+|+++|++.+.+++++|.|+|++
T Consensus 85 a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~ 161 (402)
T PRK07338 85 VSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLINP 161 (402)
T ss_pred EEECCCCCccEEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEEC
Confidence 999544346899999999999853 56664 68999999998 8999999999999998877788899999999
Q ss_pred CCCCCC-cHHHHHhcCccCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCC-CCCCCCHHHHHHHH
Q 020649 182 AEERGT-GAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-PQHCIDPILAVSSS 259 (323)
Q Consensus 182 ~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~-p~~g~NAi~~~~~~ 259 (323)
|||.|+ |++.+++++. .+.+++++. +|+.+.+.+.. ..+|..+++|+++|+++|++. |+.|.||+..++++
T Consensus 162 dEE~g~~g~~~~~~~~~-~~~~~~i~~--ep~~~~~~v~~----~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~~~ 234 (402)
T PRK07338 162 DEEIGSPASAPLLAELA-RGKHAALTY--EPALPDGTLAG----ARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAAEL 234 (402)
T ss_pred CcccCChhhHHHHHHHh-ccCcEEEEe--cCCCCCCcEEe----ecceeEEEEEEEEeEcccCCCCcccCccHHHHHHHH
Confidence 999985 8888888743 346776666 44433344321 235899999999999999995 99999999999999
Q ss_pred HHHHHHhhccccCCCCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHhC
Q 020649 260 VISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVLI 323 (323)
Q Consensus 260 i~~l~~~~~~~~~~~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i~ 323 (323)
+..|+++..+ ....++|++.|+||...|+||++|++++|+|+.|+++.+++.++|+++++
T Consensus 235 i~~l~~l~~~----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~ 294 (402)
T PRK07338 235 ALALHALNGQ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIA 294 (402)
T ss_pred HHHHHhhhcc----CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHh
Confidence 9999887432 23468999999999999999999999999999999999999999998763
No 15
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-41 Score=323.86 Aligned_cols=260 Identities=19% Similarity=0.241 Sum_probs=213.6
Q ss_pred hHHHHHHHHHHHhcCCCCCc-----ccHHHHHHHHHHHHHcCCc-EEecc-------C--CceEEEEEC-CCCCCeeEEE
Q 020649 58 TVNWMKKMRRQIHENPELAY-----EEFETSELIRRELDQLGIA-YRWPV-------A--KTGVVATVG-SGSPPFVALR 121 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s~-----~e~~~~~~l~~~l~~~G~~-~~~~~-------~--~~nvia~~~-~~~~~~ill~ 121 (323)
+.+++++++++|++|||+++ .|.++++||.++|+++|++ ++..+ . ++|++++++ .+++++|+|+
T Consensus 3 ~~~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll~ 82 (400)
T PRK13983 3 LRDEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWII 82 (400)
T ss_pred hHHHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEEE
Confidence 55789999999999999984 4889999999999999998 76432 1 589999994 3445799999
Q ss_pred eccCcccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC--cHHHH
Q 020649 122 ADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDM 192 (323)
Q Consensus 122 ~H~Dtvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~ 192 (323)
|||||||+++.+.|.++| +++|+|||||+ |++++++|.|++.|++.+..++++|.|+|++|||.|+ |++++
T Consensus 83 ~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~ 162 (400)
T PRK13983 83 SHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYL 162 (400)
T ss_pred eeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHH
Confidence 999999998888998877 56899999997 8999999999999999888899999999999999874 88999
Q ss_pred Hhc--CccCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHH-hhcc
Q 020649 193 IQE--GVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQN-IVSR 269 (323)
Q Consensus 193 ~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~-~~~~ 269 (323)
++. +.+.+.|++++. +.+.|++... ...++|..+++|+++|+++|+|.|+.|+||+..+++++..++. +...
T Consensus 163 ~~~~~~~~~~~d~~i~~--~~~~~~~~~i---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~ 237 (400)
T PRK13983 163 LKKHPELFKKDDLILVP--DAGNPDGSFI---EIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEK 237 (400)
T ss_pred HhhcccccCCCCEEEEe--cCCCCCCcee---EEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 876 555567877763 3344444321 1224599999999999999999999999999999999999987 3221
Q ss_pred c--cCC-C--CCceEEEEEEEcC-CcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 270 E--IDP-L--DSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 270 ~--~~~-~--~~~~~~i~~i~gg-~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
. .++ . ...+++++.+.+| ...|+||++|++++|+|++|+++.+++.++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~ 296 (400)
T PRK13983 238 FNAKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIA 296 (400)
T ss_pred hcccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 1 111 1 1246778888877 58999999999999999999999999999999876
No 16
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=2.3e-41 Score=324.02 Aligned_cols=254 Identities=19% Similarity=0.193 Sum_probs=211.1
Q ss_pred hHHHHHHHHHHHhcCCCCC---cccHHHHHHHHHHHHHcCCcEEec---cCCceEEEEE-CCCC--CCeeEEEeccCccc
Q 020649 58 TVNWMKKMRRQIHENPELA---YEEFETSELIRRELDQLGIAYRWP---VAKTGVVATV-GSGS--PPFVALRADMDALP 128 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~---~~~~nvia~~-~~~~--~~~ill~~H~Dtvp 128 (323)
..+++++++++|++|||++ ++|.++++||+++|+++|++++.. ++++|+++++ +.++ +|+|+|+|||||||
T Consensus 11 ~~~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~lll~~H~DtVp 90 (421)
T PRK08596 11 RKDELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSLIINGHMDVAE 90 (421)
T ss_pred hHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEEEEeccccccC
Confidence 4577999999999999998 467889999999999999998763 3578999999 4332 36899999999999
Q ss_pred CcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCC
Q 020649 129 IQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLEN 200 (323)
Q Consensus 129 ~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~ 200 (323)
+++.+.|+++| ++||+|||||+ |++++++|+|+++|++.+..++++|.|+|++|||.| .|++++++++. .
T Consensus 91 ~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~~~~~~--~ 168 (421)
T PRK08596 91 VSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTLQCCERGY--D 168 (421)
T ss_pred CCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHHHHHhcCC--C
Confidence 98888898777 57999999999 899999999999999988888999999999999988 49999998864 4
Q ss_pred ccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEec----------CCccCCCCCCCCHHHHHHHHHHHHHHhhcc-
Q 020649 201 VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGK----------GGHAAIPQHCIDPILAVSSSVISLQNIVSR- 269 (323)
Q Consensus 201 ~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~----------~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~- 269 (323)
.|++++.+ |+... .+ .++|..++.++++|. .+|++.|+.|.||+..++++|..|+++...
T Consensus 169 ~d~~i~~e--p~~~~-~~------~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i~~l~~~~~~~ 239 (421)
T PRK08596 169 ADFAVVVD--TSDLH-MQ------GQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKIIQSLQELERHW 239 (421)
T ss_pred CCEEEECC--CCCCc-cc------cccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHHHHHHHHHHHH
Confidence 68777664 33221 11 123776667777765 479999999999999999999999876421
Q ss_pred ----ccC--CCCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 270 ----EID--PLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 270 ----~~~--~~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
... .....++|++.|+||...|+||++|++++|+|++|+++.+++.++|++++
T Consensus 240 ~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~ 298 (421)
T PRK08596 240 AVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYI 298 (421)
T ss_pred hhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHH
Confidence 011 12346899999999999999999999999999999999999999998875
No 17
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.6e-41 Score=318.08 Aligned_cols=258 Identities=19% Similarity=0.267 Sum_probs=212.7
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEec--cCCceEEEEECCCCCCeeEEEeccCcccCcCCCCCccC
Q 020649 61 WMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP--VAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHK 138 (323)
Q Consensus 61 ~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~ 138 (323)
++++++++|++|||.+++|.++++||.++|+++|++++.. +..+|++++++. ++|+|+|++||||||+++.+.|.++
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCC
Confidence 4678899999999999999999999999999999998753 346799999854 4689999999999999887889777
Q ss_pred C----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC--CcHHHHHhcCc--cCCccEEEEE
Q 020649 139 S----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG--TGAKDMIQEGV--LENVEAIFGL 207 (323)
Q Consensus 139 p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g--~G~~~~~~~~~--~~~~d~~~~~ 207 (323)
| ++||++||||+ |++++++|.+++.+++.+..++++|.|+|+++||.+ .|++.+++... ....|++++.
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 6 56899999998 899999999999999887788899999999999986 48888875421 1246887765
Q ss_pred eccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhcccc-CCCCCceEEEEEEEc
Q 020649 208 HLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI-DPLDSQVVSVAMING 286 (323)
Q Consensus 208 ~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~-~~~~~~~~~i~~i~g 286 (323)
++......+.. ....++|..+++|+++|+++|++.|+.|.||+..+++++..|+....+.. ..+.+.+++++.|+|
T Consensus 162 ep~~~~~~~~~---i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~ 238 (375)
T PRK13009 162 EPTSTERLGDV---IKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDA 238 (375)
T ss_pred CCCcccCCCCe---EEEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEec
Confidence 43221111111 11224589999999999999999999999999999999999987642221 233456899999998
Q ss_pred CC-cCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 287 GS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 287 g~-~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
|. ..|+||++|++++|+|++|..+.+++.++|++++
T Consensus 239 G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~ 275 (375)
T PRK13009 239 GTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAIL 275 (375)
T ss_pred CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 86 7899999999999999999999999999999876
No 18
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.3e-41 Score=319.29 Aligned_cols=250 Identities=20% Similarity=0.283 Sum_probs=206.8
Q ss_pred HHHHHHHHHHhcCCCCCccc-------HHHHHHHHHHHHHcCCcEEecc-----CCceEEEEECCCCCCeeEEEeccCcc
Q 020649 60 NWMKKMRRQIHENPELAYEE-------FETSELIRRELDQLGIAYRWPV-----AKTGVVATVGSGSPPFVALRADMDAL 127 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e-------~~~~~~l~~~l~~~G~~~~~~~-----~~~nvia~~~~~~~~~ill~~H~Dtv 127 (323)
+++++++++|++|||++++| .++++||.++|+++|++++... .+.|++|+++++ .++|+|+||||||
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~-~~~il~~~H~Dvv 83 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSG-EGGLLLAGHTDTV 83 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCC-CCeEEEEeeecee
Confidence 46899999999999999876 5699999999999999986542 457999999543 4689999999999
Q ss_pred cCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccC
Q 020649 128 PIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLE 199 (323)
Q Consensus 128 p~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~ 199 (323)
|+++ ..|.++| ++||++||||+ ||+++++|++++.|++. .++++|.|+|+++||.| .|++.+++++.++
T Consensus 84 p~~~-~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~ 160 (383)
T PRK05111 84 PFDE-GRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAIR 160 (383)
T ss_pred cCCC-CcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCCC
Confidence 9854 5687776 47899999997 99999999999999864 36789999999999988 4999999876543
Q ss_pred CccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhcc----ccCC--
Q 020649 200 NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR----EIDP-- 273 (323)
Q Consensus 200 ~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~----~~~~-- 273 (323)
.|++++. +|+.. .+ ...++|..+++|+++|+++|++.|+.|.||+..+++++..|+.+... ...+
T Consensus 161 -~d~~i~~--ep~~~--~~----~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (383)
T PRK05111 161 -PDCAIIG--EPTSL--KP----VRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAF 231 (383)
T ss_pred -CCEEEEc--CCCCC--ce----eecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 5776654 23211 11 12245999999999999999999999999999999999999876421 1111
Q ss_pred -CCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 274 -LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 274 -~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
...+++|++.|+||...|+||++|++.+|+|++|+++.+++.++|++++
T Consensus 232 ~~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i 281 (383)
T PRK05111 232 TVPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREAL 281 (383)
T ss_pred CCCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 1357899999999999999999999999999999999999999998875
No 19
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.9e-41 Score=321.01 Aligned_cols=252 Identities=18% Similarity=0.261 Sum_probs=207.4
Q ss_pred HHHHHHHHHHhcCCCCCccc-HHHHHHHHHHHHHcCCcEEecc----CCceEEEEECCCCCCeeEEEeccCcccCcCCCC
Q 020649 60 NWMKKMRRQIHENPELAYEE-FETSELIRRELDQLGIAYRWPV----AKTGVVATVGSGSPPFVALRADMDALPIQELVE 134 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~----~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~ 134 (323)
.++++++++|++|||++++| .++++||.++|+++|+++++.+ .++|++++++++++|+|+|+||+||||+++ ..
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~-~~ 82 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDG-QA 82 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCC-CC
Confidence 45789999999999999887 5999999999999999986532 358999999654568999999999999865 47
Q ss_pred CccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCcc--CCccEE
Q 020649 135 WEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVL--ENVEAI 204 (323)
Q Consensus 135 w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~--~~~d~~ 204 (323)
|.++| ++||++||||+ |++++++|++++.|++. .++++|.|+|++|||.| .|++.++++... .+.|++
T Consensus 83 W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~ 160 (385)
T PRK07522 83 WTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGC 160 (385)
T ss_pred CCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEE
Confidence 97776 46999999997 99999999999999876 36789999999999987 599999875221 135777
Q ss_pred EEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccccC--C----C--CC
Q 020649 205 FGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREID--P----L--DS 276 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~--~----~--~~ 276 (323)
+.. +|+.. .+ ...++|..+++|+++|+++|+|.|+.|+||+..++++|..|+++..+... + + ..
T Consensus 161 i~~--ep~~~--~~----~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 232 (385)
T PRK07522 161 IVG--EPTSM--RP----VVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPY 232 (385)
T ss_pred EEc--cCCCC--ee----eeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCc
Confidence 654 23221 11 12235899999999999999999999999999999999999886432211 1 1 13
Q ss_pred ceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 277 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 277 ~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
++++++.|+||...|+||++|++++|+|++|.++.+++.++|++++
T Consensus 233 ~t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i 278 (385)
T PRK07522 233 STLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYA 278 (385)
T ss_pred ceeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999998875
No 20
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=3.2e-41 Score=317.07 Aligned_cols=246 Identities=21% Similarity=0.349 Sum_probs=205.1
Q ss_pred HHHHHhcCCCCCccc-HHHHHHHHHHHHHcCCcEEecc-----CCceEEEEECCCCCCeeEEEeccCcccCcCCCCCccC
Q 020649 65 MRRQIHENPELAYEE-FETSELIRRELDQLGIAYRWPV-----AKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHK 138 (323)
Q Consensus 65 l~~~l~~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~-----~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~ 138 (323)
++++|++|||++++| .++++||.++|+++|++++..+ .++|+++++++.++|+|+|+||+||||+++ +.|.++
T Consensus 2 ~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~-~~w~~~ 80 (364)
T TIGR01892 2 ILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDD-AAWTRD 80 (364)
T ss_pred hHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCC-CcCCCC
Confidence 578899999999865 7999999999999999987543 368999999643468999999999999876 589777
Q ss_pred C----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEecc
Q 020649 139 S----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLV 210 (323)
Q Consensus 139 p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~ 210 (323)
| +++|++||||+ |++++++|++++.|++.+ ++++|.|+|+++||.| .|++.+++++.+ +.|++++. +
T Consensus 81 Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~~--e 155 (364)
T TIGR01892 81 PFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAEQ--LKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAIIG--E 155 (364)
T ss_pred CCcceeeCCEEEecCccccchHHHHHHHHHHHHHhcC--cCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEEC--C
Confidence 6 57899999995 999999999999998753 6789999999999988 599999988653 46776654 2
Q ss_pred CCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhcccc-----CCC--CCceEEEEE
Q 020649 211 HKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI-----DPL--DSQVVSVAM 283 (323)
Q Consensus 211 ~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~-----~~~--~~~~~~i~~ 283 (323)
|++.... ..++|..+++|+++|+++|++.|+.|.||+..+++++..|+++..... .+. ..+++|++.
T Consensus 156 ---p~~~~~~---~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~ 229 (364)
T TIGR01892 156 ---PTRLIPV---RAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIGV 229 (364)
T ss_pred ---CCCceeE---EeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEee
Confidence 3333221 123599999999999999999999999999999999999987642211 111 246899999
Q ss_pred EEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 284 INGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 284 i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
++||...|+||++|++.+|+|++|.++.+++.++|++++
T Consensus 230 i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~ 268 (364)
T TIGR01892 230 IQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIA 268 (364)
T ss_pred eecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998875
No 21
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=2.7e-41 Score=318.46 Aligned_cols=255 Identities=21% Similarity=0.333 Sum_probs=209.7
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEec--cCCceEEEEECCCCCCeeEEEeccCcccCcCCCCCccCC-
Q 020649 63 KKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWP--VAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKS- 139 (323)
Q Consensus 63 ~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~p- 139 (323)
++++++|++|||++++|.++++||.++|+++|++++.. +..+|++++.++ .+|+|+|++|+||||+++.++|.++|
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 56789999999999999999999999999999998753 346799998754 46899999999999998878897776
Q ss_pred ---cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC--CcHHHHHhcCc--cCCccEEEEEec
Q 020649 140 ---KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG--TGAKDMIQEGV--LENVEAIFGLHL 209 (323)
Q Consensus 140 ---~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g--~G~~~~~~~~~--~~~~d~~~~~~~ 209 (323)
++||++||||+ |+++++++.+++.+++.+..++++|+|+|+++||.+ .|++.+++... ...+|++++.++
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 46899999998 799999999999998887778899999999999986 48888775311 124788887653
Q ss_pred cCCCCce-eEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccc-cCCCCCceEEEEEEEcC
Q 020649 210 VHKYPTG-VVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE-IDPLDSQVVSVAMINGG 287 (323)
Q Consensus 210 ~~~~~~~-~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~~~~~~~~i~~i~gg 287 (323)
....+.+ .+ ...++|..+++++++|+++|++.|+.|+||+..+++++..|++..... .....+.+++++.|+||
T Consensus 161 ~~~~~~~~~i----~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g 236 (370)
T TIGR01246 161 SSVKKLGDVI----KNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAG 236 (370)
T ss_pred CCcccCCceE----EEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecC
Confidence 2221111 12 122358999999999999999999999999999999999998753221 12234568999999998
Q ss_pred C-cCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 288 S-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 288 ~-~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
. ..|+||++|++++|+|++|.++.+++.++|++++
T Consensus 237 ~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~ 272 (370)
T TIGR01246 237 TGANNVIPGELYVQFNLRFSTEVSDEILKQRVEAIL 272 (370)
T ss_pred CCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 6 6899999999999999999999999999998875
No 22
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=4.7e-41 Score=320.01 Aligned_cols=260 Identities=22% Similarity=0.242 Sum_probs=211.2
Q ss_pred HHHHHHHHHHhcCCCCCcc--cHHHHHHHHHHHHHcCCcEEec---cCCceEEEEE-CCCC-CCeeEEEeccCcccCcCC
Q 020649 60 NWMKKMRRQIHENPELAYE--EFETSELIRRELDQLGIAYRWP---VAKTGVVATV-GSGS-PPFVALRADMDALPIQEL 132 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~---~~~~nvia~~-~~~~-~~~ill~~H~Dtvp~~~~ 132 (323)
++++++++++++|||+++. |.++++|+.++|+++|++++.. ++++|+++++ ++++ .|+|+|++||||||+++
T Consensus 9 ~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~- 87 (400)
T TIGR01880 9 DIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFR- 87 (400)
T ss_pred HHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCc-
Confidence 6688899999999999764 6789999999999999987643 2578899999 4443 48999999999999876
Q ss_pred CCCccCC----c-CCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC--cHHHHHhcCccCCcc
Q 020649 133 VEWEHKS----K-IDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDMIQEGVLENVE 202 (323)
Q Consensus 133 ~~w~~~p----~-~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~~~~~~~~~~d 202 (323)
..|.++| + +||+|||||+ |++++++|.|++.|++.+..++++|.|+|+++||.|+ |++.+++++.+.+.|
T Consensus 88 ~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~ 167 (400)
T TIGR01880 88 EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALN 167 (400)
T ss_pred ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCc
Confidence 4687666 2 5899999998 8999999999999999888889999999999999873 999999876666667
Q ss_pred EEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhcc---------ccCC
Q 020649 203 AIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR---------EIDP 273 (323)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~---------~~~~ 273 (323)
++++++.....|.+.. ..+..++|..+++|+++|+++|++.|. +.||+..|++++..|+++... ....
T Consensus 168 ~~~~~d~g~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 244 (400)
T TIGR01880 168 LGFALDEGLASPDDVY--RVFYAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAI 244 (400)
T ss_pred eEEEEcCCCccccccc--ceeEEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccc
Confidence 7777643221233321 123345699999999999999999764 469999999999888765211 0111
Q ss_pred CCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHhC
Q 020649 274 LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVLI 323 (323)
Q Consensus 274 ~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i~ 323 (323)
...+++|++.++||...|+||++|++.+|+|++|.++.+++.++|+++++
T Consensus 245 ~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~ 294 (400)
T TIGR01880 245 GDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCA 294 (400)
T ss_pred cccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHh
Confidence 12479999999999999999999999999999999999999999998863
No 23
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=3.3e-41 Score=317.99 Aligned_cols=249 Identities=20% Similarity=0.200 Sum_probs=199.7
Q ss_pred HHHHHhcCCCCCcccHHHHHHHHHHHHHcCCc-EEeccCCceEEEEECCCCCCeeEEEeccCcccCcC--CCCCccCC--
Q 020649 65 MRRQIHENPELAYEEFETSELIRRELDQLGIA-YRWPVAKTGVVATVGSGSPPFVALRADMDALPIQE--LVEWEHKS-- 139 (323)
Q Consensus 65 l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~--~~~w~~~p-- 139 (323)
++++|++|||++++|.++++||.++|+++|++ ++....+.||+++++++++|+|+|+|||||||+++ ...|.++|
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~ 80 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRFGDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPGDS 80 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEECCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCccc
Confidence 36789999999999999999999999999653 22222245999998544468999999999999874 24686532
Q ss_pred ----------cCCCeEeeCCc---cHHHHHHHHHHHHHHH--ccCCCCeEEEEEeEcCCCCC---CcHHHHHhcCc-cCC
Q 020649 140 ----------KIDGKMHACGH---DAHVAMLLGAAKILQE--MRETLKGTVVLIFQPAEERG---TGAKDMIQEGV-LEN 200 (323)
Q Consensus 140 ----------~~~g~l~g~G~---k~~~a~~l~a~~~l~~--~~~~~~~~i~~~~~~~EE~g---~G~~~~~~~~~-~~~ 200 (323)
++||+|||||+ |++++++|+|++.|++ .+..++++|.|+|+++||.+ .|++.++++.. +.+
T Consensus 81 ~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~ 160 (373)
T TIGR01900 81 LIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLA 160 (373)
T ss_pred ccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccccc
Confidence 56899999998 8999999999999954 35567899999999999985 38999887632 224
Q ss_pred ccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhcccc--CC-CCCc
Q 020649 201 VEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI--DP-LDSQ 277 (323)
Q Consensus 201 ~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~--~~-~~~~ 277 (323)
.|++++.+ |+.. .+ ...++|..+++|+++|+++|++.|+.|.||+..+++++..|+++..... +. ....
T Consensus 161 ~d~~iv~E--pt~~--~i----~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~ 232 (373)
T TIGR01900 161 ADFAIIGE--PTGG--GI----EAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYRE 232 (373)
T ss_pred CCEEEEEC--CCCC--cc----cccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccc
Confidence 68777653 3322 11 1234599999999999999999999999999999999999988643211 11 1236
Q ss_pred eEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHH
Q 020649 278 VVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEV 321 (323)
Q Consensus 278 ~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~ 321 (323)
++|++.|+||...|+||++|++++|+|+.|+++.+++.++|+++
T Consensus 233 t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~ 276 (373)
T TIGR01900 233 GLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGA 276 (373)
T ss_pred eEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhh
Confidence 89999999999999999999999999999999999999998643
No 24
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=9.5e-41 Score=324.23 Aligned_cols=260 Identities=18% Similarity=0.233 Sum_probs=209.8
Q ss_pred hHHHHHHHHHHHhcCCCCC--cccHHHHHHHHHHHHHcCCcEE---e---ccCCceEEEEE-CCCCCCeeEEEeccCccc
Q 020649 58 TVNWMKKMRRQIHENPELA--YEEFETSELIRRELDQLGIAYR---W---PVAKTGVVATV-GSGSPPFVALRADMDALP 128 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s--~~e~~~~~~l~~~l~~~G~~~~---~---~~~~~nvia~~-~~~~~~~ill~~H~Dtvp 128 (323)
..+++++++++|++|||++ ++|.++++||.++|+++|++++ . .+.++|+++++ +.+++|+|+|+|||||||
T Consensus 35 ~~~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtVp 114 (472)
T PRK09133 35 DQQAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVVE 114 (472)
T ss_pred hHHHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccCC
Confidence 4577999999999999998 6788999999999999999853 2 23468999999 444458999999999999
Q ss_pred CcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCC-CC-CcHHHHHhcCcc-
Q 020649 129 IQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEE-RG-TGAKDMIQEGVL- 198 (323)
Q Consensus 129 ~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-~g-~G~~~~~~~~~~- 198 (323)
+++ ++|.++| ++||+|||||+ |++++++|++++.|++.+..++++|.|+|++||| .| .|++.++++...
T Consensus 115 ~~~-~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~ 193 (472)
T PRK09133 115 AKR-EDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDL 193 (472)
T ss_pred CCh-hcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhc
Confidence 865 4698887 56899999998 8999999999999998887889999999999999 66 488988876321
Q ss_pred CCccEEEEEeccC------CCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccc--
Q 020649 199 ENVEAIFGLHLVH------KYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE-- 270 (323)
Q Consensus 199 ~~~d~~~~~~~~~------~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~-- 270 (323)
-+.|++++ +... ++|+.. .....++|..+++|+++|+++|+|.|+ +.||+..++++|..|+++..+.
T Consensus 194 ~~~~~~i~-e~~~~~~~~~gept~~---~i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~ 268 (472)
T PRK09133 194 IDAEFALN-EGGGGTLDEDGKPVLL---TVQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVML 268 (472)
T ss_pred cCeEEEEE-CCCccccCCCCCceEE---EeeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCcc
Confidence 13456554 3221 222221 123446799999999999999999996 5899999999999997641100
Q ss_pred ----------------------------------------cCC----CCCceEEEEEEEcCCcCccccceEEEEEEEecc
Q 020649 271 ----------------------------------------IDP----LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAF 306 (323)
Q Consensus 271 ----------------------------------------~~~----~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~ 306 (323)
.++ ...+++|++.|+||...|+||++|++++|+|++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~ 348 (472)
T PRK09133 269 NDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIF 348 (472)
T ss_pred CCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeC
Confidence 000 124689999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHhC
Q 020649 307 NKKRFNALRERIEEVLI 323 (323)
Q Consensus 307 ~~~~~~~~~~~i~~~i~ 323 (323)
|+++.+++.++|+++++
T Consensus 349 p~~~~e~v~~~I~~~i~ 365 (472)
T PRK09133 349 PGDTIEAVRATLKQVVA 365 (472)
T ss_pred CchhHHHHHHHHHHHhc
Confidence 99999999999998763
No 25
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=6.4e-41 Score=324.13 Aligned_cols=270 Identities=19% Similarity=0.218 Sum_probs=210.2
Q ss_pred HHHHHhcchhhHHHHHHHHHHHhcCCCCCc------ccHHHHHHHHHHHHHcCCc-EEec--cCCceEEEEE-CCCCCCe
Q 020649 48 RIIELANDQDTVNWMKKMRRQIHENPELAY------EEFETSELIRRELDQLGIA-YRWP--VAKTGVVATV-GSGSPPF 117 (323)
Q Consensus 48 ~i~~~~~~~~~~~~l~~l~~~l~~ips~s~------~e~~~~~~l~~~l~~~G~~-~~~~--~~~~nvia~~-~~~~~~~ 117 (323)
++.+++++ ..+++++++++|++|||+++ +|.++++||+++|+++|++ ++.. .+++||++++ +++++|+
T Consensus 4 ~~~~~~~~--~~~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~~ 81 (456)
T PRK08201 4 QVEAYLRE--RREAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKPT 81 (456)
T ss_pred HHHHHHHH--HHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCCE
Confidence 34444433 56889999999999999985 4578999999999999997 4433 3567899988 4445689
Q ss_pred eEEEeccCcccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cH
Q 020649 118 VALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GA 189 (323)
Q Consensus 118 ill~~H~Dtvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~ 189 (323)
|+|+||+||||+++...|.++| ++||+|||||+ ||+++++|+|++.+++.+..++++|.|++++|||.|+ |+
T Consensus 82 lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~ 161 (456)
T PRK08201 82 VLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPNL 161 (456)
T ss_pred EEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCccH
Confidence 9999999999998777898887 57899999998 8999999999999987766788899999999999984 88
Q ss_pred HHHHhcCc-cCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCC--ccCCCC-CCCCHHHHHHHHHHHHHH
Q 020649 190 KDMIQEGV-LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGG--HAAIPQ-HCIDPILAVSSSVISLQN 265 (323)
Q Consensus 190 ~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~--Hs~~p~-~g~NAi~~~~~~i~~l~~ 265 (323)
..++++.. .-+.|++++.++....+... .....++|..+++|+++|+++ |||.|. .+.||+..++++|..|++
T Consensus 162 ~~~l~~~~~~~~~d~~ii~e~~~~~~~~~---~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~~ 238 (456)
T PRK08201 162 DSFVEEEKDKLAADVVLISDTTLLGPGKP---AICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLHD 238 (456)
T ss_pred HHHHHhhHHhccCCEEEEeCCCcCCCCCE---EEEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcCC
Confidence 88876531 11357777764322111111 112345699999999999998 998655 457999999999999975
Q ss_pred hhccc-----------------------------------cCC-------------CCCceEEEEEEEcCC----cCccc
Q 020649 266 IVSRE-----------------------------------IDP-------------LDSQVVSVAMINGGS----SYNMI 293 (323)
Q Consensus 266 ~~~~~-----------------------------------~~~-------------~~~~~~~i~~i~gg~----~~nvi 293 (323)
+..+. ... ...+|+|++.|+||. ..|+|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~NvV 318 (456)
T PRK08201 239 EHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTVI 318 (456)
T ss_pred CCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceEE
Confidence 32110 000 013589999998874 37999
Q ss_pred cceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 294 PDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 294 P~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
|++|++++|+|++|+++.+++.++|++++
T Consensus 319 P~~a~~~~diR~~p~~~~e~v~~~i~~~l 347 (456)
T PRK08201 319 PAEAHAKITCRLVPDQDPQEILDLIEAHL 347 (456)
T ss_pred CcceEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999875
No 26
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=4.2e-41 Score=323.55 Aligned_cols=258 Identities=18% Similarity=0.217 Sum_probs=206.8
Q ss_pred HHHHHHHHHHhcCCCCCcc-c--HHHHHHHHHHHHHcCCcEEecc--CCceEEEEECCCCCCeeEEEeccCcccCcCCCC
Q 020649 60 NWMKKMRRQIHENPELAYE-E--FETSELIRRELDQLGIAYRWPV--AKTGVVATVGSGSPPFVALRADMDALPIQELVE 134 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~-e--~~~~~~l~~~l~~~G~~~~~~~--~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~ 134 (323)
+++++++++|++|||++++ | .++++||.++|+++|++++..+ +++|++|+++.+++|+|+|+|||||||+++.+.
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 4578889999999999964 3 7999999999999999987543 578899999654468999999999999988788
Q ss_pred CccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcC--ccCCccEE
Q 020649 135 WEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEG--VLENVEAI 204 (323)
Q Consensus 135 w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~--~~~~~d~~ 204 (323)
|.++| ++||+|||||+ ||+++++|.|++.+++.+ .++.+|.|+|++|||.|+ |++.++++. .+ ++|++
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~-~~d~v 159 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKL-KADSV 159 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHh-CCCEE
Confidence 98877 57999999998 899999999999887654 578899999999999985 888887652 22 46777
Q ss_pred EEEeccCCCCceeEEeeeccccceeeEEEEEEEe--cCCccCCCCCCCCHHHHHHHHHHHHHHhhccc------------
Q 020649 205 FGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISG--KGGHAAIPQHCIDPILAVSSSVISLQNIVSRE------------ 270 (323)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G--~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~------------ 270 (323)
++ .+....+.+.... ...++|..+++++++| +++|+|.|+.|.||+..+++++..|++.....
T Consensus 160 i~-E~~~~~~~~~~~i--~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 236 (436)
T PRK06446 160 IM-EGAGLDPKGRPQI--VLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVREL 236 (436)
T ss_pred EE-CCCCccCCCCeEE--EEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCC
Confidence 64 2211112221111 1234699999999998 99999999999999999999999997542000
Q ss_pred ----------------------------c--------CCCCCceEEEEEEEcC----CcCccccceEEEEEEEeccChhh
Q 020649 271 ----------------------------I--------DPLDSQVVSVAMINGG----SSYNMIPDSATVAGTFRAFNKKR 310 (323)
Q Consensus 271 ----------------------------~--------~~~~~~~~~i~~i~gg----~~~nviP~~a~~~~diR~~~~~~ 310 (323)
. .....+++|++.++|| ...|+||++|++++|+|++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~ 316 (436)
T PRK06446 237 TEEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQD 316 (436)
T ss_pred CHHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCC
Confidence 0 0112468999999887 46799999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 020649 311 FNALRERIEEVL 322 (323)
Q Consensus 311 ~~~~~~~i~~~i 322 (323)
.+++.++|++++
T Consensus 317 ~~~v~~~l~~~~ 328 (436)
T PRK06446 317 PYKIFELLKKHL 328 (436)
T ss_pred HHHHHHHHHHHH
Confidence 999999999876
No 27
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=320.29 Aligned_cols=265 Identities=18% Similarity=0.202 Sum_probs=209.5
Q ss_pred HHHHhcchhhHHHHHHHHHHHhcCCCCCcc------cHHHHHHHHHHHHHcCC-cEEec--cCCceEEEEECC-CCCCee
Q 020649 49 IIELANDQDTVNWMKKMRRQIHENPELAYE------EFETSELIRRELDQLGI-AYRWP--VAKTGVVATVGS-GSPPFV 118 (323)
Q Consensus 49 i~~~~~~~~~~~~l~~l~~~l~~ips~s~~------e~~~~~~l~~~l~~~G~-~~~~~--~~~~nvia~~~~-~~~~~i 118 (323)
+.++++ ++.+++++++++|++|||++++ |.++++||.++|+++|+ +++.. ++++|+++++++ .++|+|
T Consensus 9 ~~~~i~--~~~~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~~~l 86 (449)
T PRK07907 9 LRARVA--ELLPRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGAPTV 86 (449)
T ss_pred HHHHHH--HHHHHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCCCEE
Confidence 444443 3678899999999999999953 57899999999999998 67654 467899999943 346899
Q ss_pred EEEeccCcccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHH
Q 020649 119 ALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAK 190 (323)
Q Consensus 119 ll~~H~Dtvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~ 190 (323)
+|+||+||||+++..+|.++| ++||+|||||+ |++++++|.|+++| +.+++++|.|++++|||.|+ |++
T Consensus 87 ll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~g~~ 163 (449)
T PRK07907 87 LLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSPSLE 163 (449)
T ss_pred EEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCccHH
Confidence 999999999998877898887 56999999998 89999999999998 34567899999999999884 888
Q ss_pred HHHhcCc-cCCccEEEEEeccCCCCc-eeEEeeeccccceeeEEEEEEE--ecCCccCC-CCCCCCHHHHHHHHHHHHHH
Q 020649 191 DMIQEGV-LENVEAIFGLHLVHKYPT-GVVASRPGDFLAGCGSFKAKIS--GKGGHAAI-PQHCIDPILAVSSSVISLQN 265 (323)
Q Consensus 191 ~~~~~~~-~~~~d~~~~~~~~~~~~~-~~~~~~~g~~~~G~~~~~i~v~--G~~~Hs~~-p~~g~NAi~~~~~~i~~l~~ 265 (323)
+++++.. ..+.|++++.++ +... +.-.. ...++|..+++++++ |+++|||. +..++||+..+++++.+|++
T Consensus 164 ~~l~~~~~~~~~d~~iv~E~--~~~~~~~p~i--~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~~ 239 (449)
T PRK07907 164 RLLAEHPDLLAADVIVIADS--GNWSVGVPAL--TTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLHD 239 (449)
T ss_pred HHHHhchHhhcCCEEEEecC--CcCCCCCeEE--EEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhCC
Confidence 8887631 124677777643 3211 10001 123569999999988 88999997 56789999999999999976
Q ss_pred hhcccc--------CC--------------------------------CCCceEEEEEEEc---CCcCccccceEEEEEE
Q 020649 266 IVSREI--------DP--------------------------------LDSQVVSVAMING---GSSYNMIPDSATVAGT 302 (323)
Q Consensus 266 ~~~~~~--------~~--------------------------------~~~~~~~i~~i~g---g~~~nviP~~a~~~~d 302 (323)
...+.. .. ...++++++.|+| |.+.|+||++|++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~~d 319 (449)
T PRK07907 240 EDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARARLS 319 (449)
T ss_pred CCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEEEE
Confidence 432100 00 1246889999986 4688999999999999
Q ss_pred EeccChhhHHHHHHHHHHHh
Q 020649 303 FRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 303 iR~~~~~~~~~~~~~i~~~i 322 (323)
+|++|+++.+++.++|++++
T Consensus 320 iR~~p~~~~e~v~~~l~~~l 339 (449)
T PRK07907 320 LRVAPGQDAAEAQDALVAHL 339 (449)
T ss_pred EEcCCCCCHHHHHHHHHHHH
Confidence 99999999999999998875
No 28
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.3e-40 Score=308.23 Aligned_cols=249 Identities=18% Similarity=0.249 Sum_probs=204.7
Q ss_pred hHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHc-CCcEEeccCCceEEEEECCCCCCeeEEEeccCcccCcCCCCCc
Q 020649 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQL-GIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWE 136 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~ 136 (323)
+.++++++++++++|||++++|.++++||.++|+++ |+++... +.|++++++.+++++|+|+|||||||+++ .++
T Consensus 5 ~~~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~--~~~ 80 (352)
T PRK13007 5 LAADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIRH--GNSVVARTDLGRPSRVVLAGHLDTVPVAD--NLP 80 (352)
T ss_pred hHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEec--CCeEEEEccCCCCCeEEEEccccccCCCC--CCC
Confidence 557899999999999999999999999999999996 8887653 56899999545456899999999999864 233
Q ss_pred cCCcCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC---CcHHHHHhcC-ccCCccEEEEEec
Q 020649 137 HKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG---TGAKDMIQEG-VLENVEAIFGLHL 209 (323)
Q Consensus 137 ~~p~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g---~G~~~~~~~~-~~~~~d~~~~~~~ 209 (323)
.. ++||+|||||+ |+++|++|++++.+. +++++|.|+|+++||.| .|++.++++. .+.+.|++++.+
T Consensus 81 ~~-~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~e- 154 (352)
T PRK13007 81 SR-REGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLE- 154 (352)
T ss_pred cc-eeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEec-
Confidence 22 67999999998 899999999999993 36789999999999986 3788887653 223578888764
Q ss_pred cCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccccC---CCCCceEEEEEEEc
Q 020649 210 VHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREID---PLDSQVVSVAMING 286 (323)
Q Consensus 210 ~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~---~~~~~~~~i~~i~g 286 (323)
|+.. .+. ..++|..+++|+++|+++|+|.|+.|+||+..++++|..|+++..+... .....++|++.++|
T Consensus 155 -p~~~--~i~----~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~g 227 (352)
T PRK13007 155 -PTDG--VIE----AGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISG 227 (352)
T ss_pred -CCCC--ceE----eeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEec
Confidence 3322 221 1235899999999999999999999999999999999999886433211 11135899999999
Q ss_pred CCcCccccceEEEEEEEeccChhhHHHHHHHHHHHhC
Q 020649 287 GSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVLI 323 (323)
Q Consensus 287 g~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i~ 323 (323)
|...|+||++|++++|+|++|+++.+++.++|+++++
T Consensus 228 G~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~ 264 (352)
T PRK13007 228 GVAGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFD 264 (352)
T ss_pred CCcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999998763
No 29
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=4.4e-39 Score=303.79 Aligned_cols=248 Identities=17% Similarity=0.185 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHhcCCCCCcccH---HHHHHHHHHHHHcCCcEEeccC----CceEEEEECC--CCCCeeEEEeccCcccC
Q 020649 59 VNWMKKMRRQIHENPELAYEEF---ETSELIRRELDQLGIAYRWPVA----KTGVVATVGS--GSPPFVALRADMDALPI 129 (323)
Q Consensus 59 ~~~l~~l~~~l~~ips~s~~e~---~~~~~l~~~l~~~G~~~~~~~~----~~nvia~~~~--~~~~~ill~~H~Dtvp~ 129 (323)
.+++++++++|++|||++++|. ++++|+.++|+++|++++..+. ..|+++++++ +.+|+|+|+|||||||+
T Consensus 10 ~~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~ 89 (376)
T PRK07473 10 SEAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHP 89 (376)
T ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCC
Confidence 3678899999999999999875 6778999999999999886432 2479999853 24689999999999975
Q ss_pred cCCCCCccCC--cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcCccCCccE
Q 020649 130 QELVEWEHKS--KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEA 203 (323)
Q Consensus 130 ~~~~~w~~~p--~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~ 203 (323)
.+ .|..+| ++||+|||||+ |++++++|+|+++|++.+..++.+|.|+|++|||.|+ |++.+++++.. ..|+
T Consensus 90 ~~--~~~~~p~~~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~ 166 (376)
T PRK07473 90 VG--TLEKLPWRREGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKY 166 (376)
T ss_pred CC--CccCCCeEEECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCE
Confidence 33 465444 67899999996 9999999999999998887777899999999999985 99999986433 4688
Q ss_pred EEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccC-CCCCCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEE
Q 020649 204 IFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVA 282 (323)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~ 282 (323)
+++.+ |+...+.+.. .++|..+++|+++|+++|++ .|+.|+||+..+++++..|+++.. ...++|++
T Consensus 167 ~iv~e--p~~~~~~v~~----~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~vg 234 (376)
T PRK07473 167 VLVPE--PGRPDNGVVT----GRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSVG 234 (376)
T ss_pred EEEeC--CCCCCCCEEE----ECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeEe
Confidence 88764 4432222221 23599999999999999997 699999999999999999988742 13589999
Q ss_pred EEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHH
Q 020649 283 MINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEV 321 (323)
Q Consensus 283 ~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~ 321 (323)
.|+||...|+||++|++++|.|.....+.+++.+++.+.
T Consensus 235 ~i~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~ 273 (376)
T PRK07473 235 IVHGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLAL 273 (376)
T ss_pred eEEcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHh
Confidence 999999999999999999999999988888888888664
No 30
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.1e-39 Score=306.92 Aligned_cols=252 Identities=21% Similarity=0.271 Sum_probs=206.0
Q ss_pred hHHHHHHHHHHHhcCCCCC---cccHHHHHHHHHHHHHcCCcEEeccC-----------CceEEEEECCCCCCeeEEEec
Q 020649 58 TVNWMKKMRRQIHENPELA---YEEFETSELIRRELDQLGIAYRWPVA-----------KTGVVATVGSGSPPFVALRAD 123 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~~~-----------~~nvia~~~~~~~~~ill~~H 123 (323)
+.++++++++++++|||.+ .+|.++++||.++|+++|++++.... ++|+++..+.+ +|+|+|++|
T Consensus 4 ~~~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ill~~H 82 (394)
T PRK08651 4 MMFDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSG-NPHLHFNGH 82 (394)
T ss_pred hHHHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCC-CceEEEEee
Confidence 5588999999999999998 56789999999999999999875431 24577776544 489999999
Q ss_pred cCcccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhc
Q 020649 124 MDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQE 195 (323)
Q Consensus 124 ~Dtvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~ 195 (323)
|||||+++.. |..+| +++|++||||+ |++++++|++++.+++.+ +++|.|+|+++||.|+ |+++++++
T Consensus 83 lDtvp~~~~~-~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~~ 158 (394)
T PRK08651 83 YDVVPPGEGW-SVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVEE 158 (394)
T ss_pred eeeecCCCCc-cccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHhc
Confidence 9999987532 56665 47899999998 899999999999998765 7899999999999884 99999988
Q ss_pred CccCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhcccc----
Q 020649 196 GVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI---- 271 (323)
Q Consensus 196 ~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~---- 271 (323)
+.+ +.|+++..+ ++.. +.+.. .++|..+++|+++|+++|++.|+.|+||+..+++++..|++...+..
T Consensus 159 ~~~-~~d~~i~~~--~~~~-~~i~~----~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~ 230 (394)
T PRK08651 159 GKV-TPDYVIVGE--PSGL-DNICI----GHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYE 230 (394)
T ss_pred cCC-CCCEEEEec--CCCC-CceEE----ecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhcccc
Confidence 654 367777653 3322 12222 23589999999999999999999999999999999999986532111
Q ss_pred --C-CCCCceEEEEE--EEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 272 --D-PLDSQVVSVAM--INGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 272 --~-~~~~~~~~i~~--i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
. .....+++++. ++||...|+||++|++.+|+|++|.++.+++.++|++++
T Consensus 231 ~~~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~ 286 (394)
T PRK08651 231 YDDERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALL 286 (394)
T ss_pred ccccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHH
Confidence 1 12345789988 999999999999999999999999999999999998875
No 31
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=3.4e-39 Score=312.67 Aligned_cols=268 Identities=16% Similarity=0.233 Sum_probs=211.1
Q ss_pred HHHHhcchhhHHHHHHHHHHHhcCCCCCccc------HHHHHHHHHHHHHcCCcEEec--cCCceEEEEEC-C-CCCCee
Q 020649 49 IIELANDQDTVNWMKKMRRQIHENPELAYEE------FETSELIRRELDQLGIAYRWP--VAKTGVVATVG-S-GSPPFV 118 (323)
Q Consensus 49 i~~~~~~~~~~~~l~~l~~~l~~ips~s~~e------~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~-~-~~~~~i 118 (323)
+.+.++. ..++++++++++++|||.++++ .++++||.++|+++|++++.. .+++||+++++ . +.+|+|
T Consensus 8 ~~~~~~~--~~~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~~~l 85 (464)
T PRK09104 8 VLDHIDA--NLDASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDAPHV 85 (464)
T ss_pred HHHHHHH--hHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCCCEE
Confidence 4444432 5688999999999999999754 688999999999999998753 34679999994 3 346999
Q ss_pred EEEeccCcccCcCCCCCccCC----cCCC-----eEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC
Q 020649 119 ALRADMDALPIQELVEWEHKS----KIDG-----KMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG 186 (323)
Q Consensus 119 ll~~H~Dtvp~~~~~~w~~~p----~~~g-----~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 186 (323)
+|+||+||||+++.++|.++| +++| +|||||+ ||+++++|.|++.|++.+..++++|.|+|++|||.|
T Consensus 86 ll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g 165 (464)
T PRK09104 86 LFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEESG 165 (464)
T ss_pred EEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECccccC
Confidence 999999999998878898887 3343 5999998 899999999999999887778899999999999998
Q ss_pred C-cHHHHHhcCc-cCCccEEEEEeccCCCC-ceeEEeeeccccceeeEEEEEEEe--cCCccCC-CCCCCCHHHHHHHHH
Q 020649 187 T-GAKDMIQEGV-LENVEAIFGLHLVHKYP-TGVVASRPGDFLAGCGSFKAKISG--KGGHAAI-PQHCIDPILAVSSSV 260 (323)
Q Consensus 187 ~-G~~~~~~~~~-~~~~d~~~~~~~~~~~~-~~~~~~~~g~~~~G~~~~~i~v~G--~~~Hs~~-p~~g~NAi~~~~~~i 260 (323)
+ |...++.+.. ....|++++.++....+ ...+ ...++|..+++++++| +++|||. |+.|.||+..+++++
T Consensus 166 ~~g~~~~l~~~~~~~~~d~~iv~E~~~~~~~~~~i----~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~~l 241 (464)
T PRK09104 166 SPSLVPFLEANAEELKADVALVCDTGMWDRETPAI----TTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTRIL 241 (464)
T ss_pred CccHHHHHHhhHHhcCCCEEEEeCCCCCCCCCeEE----EeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHHHH
Confidence 5 7777776422 11468888765321111 1122 2335699999999999 6899995 788999999999999
Q ss_pred HHHHHhhcccc------------------------------------CC------------CCCceEEEEEEEcCC----
Q 020649 261 ISLQNIVSREI------------------------------------DP------------LDSQVVSVAMINGGS---- 288 (323)
Q Consensus 261 ~~l~~~~~~~~------------------------------------~~------------~~~~~~~i~~i~gg~---- 288 (323)
.+|++...+.. .+ ...+++|++.|+||.
T Consensus 242 ~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~ 321 (464)
T PRK09104 242 AGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYTGEG 321 (464)
T ss_pred HhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCCCCC
Confidence 99876321100 00 013689999999885
Q ss_pred cCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 289 SYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 289 ~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
..|+||++|++++|+|++|+++++++.++|++++
T Consensus 322 ~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l 355 (464)
T PRK09104 322 FKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYV 355 (464)
T ss_pred CccEecCceEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 4699999999999999999999999999999876
No 32
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=3e-39 Score=310.04 Aligned_cols=254 Identities=18% Similarity=0.275 Sum_probs=200.7
Q ss_pred HHHHHHHhcCCCCC------cccHHHHHHHHHHHHHcCCcEEecc---CCceEEEEE-CCCC-CCeeEEEeccCcccCcC
Q 020649 63 KKMRRQIHENPELA------YEEFETSELIRRELDQLGIAYRWPV---AKTGVVATV-GSGS-PPFVALRADMDALPIQE 131 (323)
Q Consensus 63 ~~l~~~l~~ips~s------~~e~~~~~~l~~~l~~~G~~~~~~~---~~~nvia~~-~~~~-~~~ill~~H~Dtvp~~~ 131 (323)
++++++|++|||++ .+|.++++||.++|+++|++++..+ +.+|+++++ +.++ .|+|+|++|+||||+++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 56789999999998 6789999999999999999987653 468999999 4333 58999999999999865
Q ss_pred CCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC--cHHHHHhcC--ccCC
Q 020649 132 LVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDMIQEG--VLEN 200 (323)
Q Consensus 132 ~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~~~~~--~~~~ 200 (323)
+.|.++| ++||++||||+ |++++++|+|++++++.+..++++|.|+|+++||.|+ |++.++++. .++.
T Consensus 82 -~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~ 160 (426)
T PRK07906 82 -ADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEG 160 (426)
T ss_pred -ccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccc
Confidence 4798877 57999999998 8999999999999999888899999999999999973 899888753 2222
Q ss_pred ccEEEEEeccCCC-----CceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccc-----
Q 020649 201 VEAIFGLHLVHKY-----PTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE----- 270 (323)
Q Consensus 201 ~d~~~~~~~~~~~-----~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~----- 270 (323)
.++++. +++. +...........++|..+++|+++|+++|+|.|+. +||+..++++|..|++...+.
T Consensus 161 ~~~ii~---e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~ 236 (426)
T PRK07906 161 VTEAIS---EVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPT 236 (426)
T ss_pred hheEEE---CCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHH
Confidence 333332 2221 11000011233467999999999999999999874 999999999999997542110
Q ss_pred ---------------cCCC-------------------CCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHH
Q 020649 271 ---------------IDPL-------------------DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRE 316 (323)
Q Consensus 271 ---------------~~~~-------------------~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~ 316 (323)
.++. ..+++|++.|+||...|+||++|++++|+|++|+++ +++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~ 315 (426)
T PRK07906 237 VRAFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLA 315 (426)
T ss_pred HHHHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHH
Confidence 0000 135899999999999999999999999999999987 77888
Q ss_pred HHHHHh
Q 020649 317 RIEEVL 322 (323)
Q Consensus 317 ~i~~~i 322 (323)
+|++++
T Consensus 316 ~i~~~~ 321 (426)
T PRK07906 316 TVDELL 321 (426)
T ss_pred HHHHHh
Confidence 888764
No 33
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=5.5e-39 Score=301.64 Aligned_cols=241 Identities=17% Similarity=0.209 Sum_probs=195.5
Q ss_pred hHHHHHHHHHHHhcCCCCC----cccHHHHHHHHHHHHHcCCcEEecc---CCceEEEEECCCCCCeeEEEeccCcccCc
Q 020649 58 TVNWMKKMRRQIHENPELA----YEEFETSELIRRELDQLGIAYRWPV---AKTGVVATVGSGSPPFVALRADMDALPIQ 130 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s----~~e~~~~~~l~~~l~~~G~~~~~~~---~~~nvia~~~~~~~~~ill~~H~Dtvp~~ 130 (323)
..+++++++++|++|||.+ ++|.++++|+.++|+ |++++..+ ++.|+++..+ +|+|+|+||+||||++
T Consensus 4 ~~~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~~ 78 (364)
T PRK08737 4 LLESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPDS 78 (364)
T ss_pred cHHHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCCC
Confidence 4467889999999999985 357899999999997 99887553 3568988643 3789999999999986
Q ss_pred CCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC--cHHHHHhcCccCCc
Q 020649 131 ELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDMIQEGVLENV 201 (323)
Q Consensus 131 ~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~~~~~~~~~~ 201 (323)
+ .|.++| ++||+|||||+ |++++++|+|++. +.++|.|+|++|||.|+ |++.+++.+. +.
T Consensus 79 ~--~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~ 147 (364)
T PRK08737 79 P--HWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PY 147 (364)
T ss_pred C--CCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CC
Confidence 4 697776 56899999998 8999999999864 35689999999999884 7888888764 46
Q ss_pred cEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCC-CCCCCHHHHHHHHHHHHHHhhccc----cCCCCC
Q 020649 202 EAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIP-QHCIDPILAVSSSVISLQNIVSRE----IDPLDS 276 (323)
Q Consensus 202 d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p-~~g~NAi~~~~~~i~~l~~~~~~~----~~~~~~ 276 (323)
|++++. +|+..... ..++|..+++|+++|+++|+|.| +.|+||+..++++|.++.+..... ......
T Consensus 148 ~~~iv~--Ept~~~~~------~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~ 219 (364)
T PRK08737 148 EAVLVA--EPTMSEAV------LAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTG 219 (364)
T ss_pred CEEEEc--CCCCceeE------EecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCC
Confidence 887765 34432212 23459999999999999999987 589999999999998876543111 122335
Q ss_pred ceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 277 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 277 ~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
.++|++.|+||...|+||++|++++|+|+.|+++.+++.++|++++
T Consensus 220 ~t~~vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~ 265 (364)
T PRK08737 220 LRFNIGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFA 265 (364)
T ss_pred CceEEeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHH
Confidence 6999999999999999999999999999999999999999998764
No 34
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-39 Score=313.87 Aligned_cols=260 Identities=17% Similarity=0.230 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHhcCCCCCcccH---------HHHHHHHHHHHHcCCcEEecc-CCceEEEEE-CCCCC-CeeEEEeccCc
Q 020649 59 VNWMKKMRRQIHENPELAYEEF---------ETSELIRRELDQLGIAYRWPV-AKTGVVATV-GSGSP-PFVALRADMDA 126 (323)
Q Consensus 59 ~~~l~~l~~~l~~ips~s~~e~---------~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~-~~~~~-~~ill~~H~Dt 126 (323)
.++++++++++++|||++++|. ++++||.++|+.+|++++... ...|+++.+ +.+++ |+|+|+|||||
T Consensus 43 ~~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH~Dv 122 (486)
T PRK08262 43 EDAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAHQDV 122 (486)
T ss_pred HHHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECcccc
Confidence 4779999999999999998763 488999999999999766432 235788887 54434 89999999999
Q ss_pred ccCcCC--CCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcC
Q 020649 127 LPIQEL--VEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEG 196 (323)
Q Consensus 127 vp~~~~--~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~ 196 (323)
||+++. ..|.++| ++||+|||||+ ||+++++|.|++.+++.+.+++++|.|+|+++||.|+ |++.+++..
T Consensus 123 Vp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~l 202 (486)
T PRK08262 123 VPVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAELL 202 (486)
T ss_pred cCCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHHH
Confidence 998754 5697665 57899999996 9999999999999999887889999999999999884 888887531
Q ss_pred ccC--CccEEE------EEec--cCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHh
Q 020649 197 VLE--NVEAIF------GLHL--VHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNI 266 (323)
Q Consensus 197 ~~~--~~d~~~------~~~~--~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~ 266 (323)
... +.|+++ ..+. ....|++.+. ..++|..+++|+++|+++|||.|+. .||+..++++|.+|++.
T Consensus 203 ~~~~~~~~~~~~~~~~i~~~~~~~~~~p~~~i~----~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~~l~~~ 277 (486)
T PRK08262 203 KERGVRLAFVLDEGGAITEGVLPGVKKPVALIG----VAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALTRLEDN 277 (486)
T ss_pred HHhcCCEEEEEeCCceecccccCCCCceEEeeE----EeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHHHHhhC
Confidence 111 233332 1110 1123434332 3346999999999999999999998 99999999999999863
Q ss_pred hccc--------------------------------------------cCCCCCceEEEEEEEcCCcCccccceEEEEEE
Q 020649 267 VSRE--------------------------------------------IDPLDSQVVSVAMINGGSSYNMIPDSATVAGT 302 (323)
Q Consensus 267 ~~~~--------------------------------------------~~~~~~~~~~i~~i~gg~~~nviP~~a~~~~d 302 (323)
..+. ......+++|++.|+||...|+||++|++++|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a~~~~d 357 (486)
T PRK08262 278 PLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRATATVN 357 (486)
T ss_pred CCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCccEEEEE
Confidence 1000 00122468999999999999999999999999
Q ss_pred EeccChhhHHHHHHHHHHHhC
Q 020649 303 FRAFNKKRFNALRERIEEVLI 323 (323)
Q Consensus 303 iR~~~~~~~~~~~~~i~~~i~ 323 (323)
+|++|+++.+++.++|+++++
T Consensus 358 iR~~p~~~~~~i~~~i~~~~~ 378 (486)
T PRK08262 358 FRILPGDSVESVLAHVRRAVA 378 (486)
T ss_pred EEeCCCCCHHHHHHHHHHHhc
Confidence 999999999999999998863
No 35
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=4.7e-38 Score=293.88 Aligned_cols=236 Identities=16% Similarity=0.176 Sum_probs=195.3
Q ss_pred hHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEeccCcccCcCCCCCcc
Q 020649 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEH 137 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~ 137 (323)
+.+++++++++|++|||++++|.++++||.++|+++|++++..+ ..|++. .+ .|+|+|+||+||||. |..
T Consensus 8 ~~~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~-~~~~~~-~g---~~~lll~gH~DtVp~-----~~~ 77 (346)
T PRK00466 8 VKQKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILP-DSNSFI-LG---EGDILLASHVDTVPG-----YIE 77 (346)
T ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEec-CCCcEe-cC---CCeEEEEeccccCCC-----CCC
Confidence 44778999999999999999999999999999999999988754 456553 12 368999999999994 322
Q ss_pred CCcCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEeccCCC
Q 020649 138 KSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKY 213 (323)
Q Consensus 138 ~p~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~ 213 (323)
.+++||+|||||+ |++++++|+|++++++.+ .++.|+|++|||.| .|++.+++++. +.|++++.+ |+.
T Consensus 78 ~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~e--p~~ 149 (346)
T PRK00466 78 PKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVGE--PSN 149 (346)
T ss_pred ceeeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEcC--CCC
Confidence 3378999999998 899999999999998865 35899999999988 49999998763 478777653 332
Q ss_pred CceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccc
Q 020649 214 PTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMI 293 (323)
Q Consensus 214 ~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg~~~nvi 293 (323)
. ..+. ..++|..+++|+++|+++|+|.|+ .||+..+++++..|++.. ......++|++.++||...|+|
T Consensus 150 ~-~~i~----~~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~----~~~~~~t~~~~~i~gG~~~Nvv 218 (346)
T PRK00466 150 G-TDIV----VEYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQP----ENYDKPSIVPTIIRAGESYNVT 218 (346)
T ss_pred C-CceE----EEeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhcc----ccCCCCcceeeEEecCCcCccc
Confidence 1 1121 124599999999999999999886 599999999999987652 2233568999999999999999
Q ss_pred cceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 294 PDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 294 P~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
|++|++++|+|++|+++.+++.++|++.+
T Consensus 219 P~~a~~~~diR~~p~~~~~~v~~~i~~~~ 247 (346)
T PRK00466 219 PAKLYLHFDVRYAINNKRDDLISEIKDKF 247 (346)
T ss_pred CCceEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999875
No 36
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=5e-38 Score=304.86 Aligned_cols=268 Identities=14% Similarity=0.097 Sum_probs=202.3
Q ss_pred HHHHHHHhcchhhHHHHHHHHHHHhcCCCCCcc---cHHHHHHHH----HHHHHcCCcEEecc-----CCceEEEEECC-
Q 020649 46 KSRIIELANDQDTVNWMKKMRRQIHENPELAYE---EFETSELIR----RELDQLGIAYRWPV-----AKTGVVATVGS- 112 (323)
Q Consensus 46 ~~~i~~~~~~~~~~~~l~~l~~~l~~ips~s~~---e~~~~~~l~----~~l~~~G~~~~~~~-----~~~nvia~~~~- 112 (323)
.+++.+..+. +++++++++|++|||++++ +.++++|+. ++|+++|++++..+ +++||++++++
T Consensus 7 ~~~~~~~~~~----~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~ 82 (469)
T PRK07079 7 IARAAAYFDS----GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIED 82 (469)
T ss_pred HHHHHHhhcc----HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCC
Confidence 3445555443 4689999999999999974 346676664 58999999987532 46799999843
Q ss_pred CCCCeeEEEeccCcccCcCCCCCc--cCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHc-cCCCCeEEEEEeEcC
Q 020649 113 GSPPFVALRADMDALPIQELVEWE--HKS----KIDGKMHACGH---DAHVAMLLGAAKILQEM-RETLKGTVVLIFQPA 182 (323)
Q Consensus 113 ~~~~~ill~~H~Dtvp~~~~~~w~--~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~-~~~~~~~i~~~~~~~ 182 (323)
+++|+|+|+||+||||++ .+.|. ++| ++||+|||||+ ||+++++|+|++++++. +.+++++|.|++++|
T Consensus 83 ~~~~~lll~gH~DvVp~~-~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~d 161 (469)
T PRK07079 83 DALPTVLIYGHGDVVRGY-DEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMG 161 (469)
T ss_pred CCCCEEEEEcccCCCCCC-hHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECc
Confidence 446899999999999975 35687 365 67999999998 99999999999998754 467889999999999
Q ss_pred CCCCC-cHHHHHhcCc-cCCccEEEEEeccCCCCc-eeEEeeeccccceeeEEEEEEEec--CCccCC-CCCCCCHHHHH
Q 020649 183 EERGT-GAKDMIQEGV-LENVEAIFGLHLVHKYPT-GVVASRPGDFLAGCGSFKAKISGK--GGHAAI-PQHCIDPILAV 256 (323)
Q Consensus 183 EE~g~-G~~~~~~~~~-~~~~d~~~~~~~~~~~~~-~~~~~~~g~~~~G~~~~~i~v~G~--~~Hs~~-p~~g~NAi~~~ 256 (323)
||.|+ |++.++++.. ..+.|++++.++....+. ..+ ...++|..+++|+++|+ +.||+. ...+.||+..+
T Consensus 162 EE~g~~G~~~l~~~~~~~~~~d~~iv~e~~~~~~~~~~i----~~g~kG~~~~~v~v~G~~~~~hs~~~~g~~~nai~~l 237 (469)
T PRK07079 162 EEIGSPGLAEVCRQHREALAADVLIASDGPRLSAERPTL----FLGSRGAVNFRLRVNLRDGAHHSGNWGGLLRNPGTVL 237 (469)
T ss_pred cccCCccHHHHHHHhHHhcCCCEEEEeCCCccCCCCeEE----EEecceEEEEEEEEeeCCCCCCCCccccccCCHHHHH
Confidence 99985 9999988642 113688777642211111 112 22356999999999997 446663 23346999999
Q ss_pred HHHHHHHHHhhccc------------------------c--------------------CCCCCceEEEEEEEcCC---c
Q 020649 257 SSSVISLQNIVSRE------------------------I--------------------DPLDSQVVSVAMINGGS---S 289 (323)
Q Consensus 257 ~~~i~~l~~~~~~~------------------------~--------------------~~~~~~~~~i~~i~gg~---~ 289 (323)
+++|..|.+...+. . .....+++|++.|+||. .
T Consensus 238 ~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~ 317 (469)
T PRK07079 238 AHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAP 317 (469)
T ss_pred HHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCc
Confidence 99999985421000 0 00123589999999984 6
Q ss_pred CccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 290 YNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 290 ~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
.|+||++|++++|+|++|+++.+++.++|++++
T Consensus 318 ~NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i 350 (469)
T PRK07079 318 VNAIPGSARAVCQLRFVVGTDWENLAPHLRAHL 350 (469)
T ss_pred ceEecCceEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence 899999999999999999999999999999886
No 37
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.4e-38 Score=293.95 Aligned_cols=240 Identities=19% Similarity=0.152 Sum_probs=197.0
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccC--CceEEEEECCCCCCeeEEEeccCcccCcCCCCCcc
Q 020649 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVA--KTGVVATVGSGSPPFVALRADMDALPIQELVEWEH 137 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~--~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~ 137 (323)
+++++++++|++|||++++|.++++||.++|+++|++++.... ..|+++ +++|+|+|+|||||||.+.+ +.
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~i~l~~H~D~vp~~~~---~~ 74 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV----NSKAELFVEVHYDTVPVRAE---FF 74 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc----CCCCEEEEEccccccCCCCC---CE
Confidence 4678999999999999999999999999999999999876542 345555 33589999999999997431 11
Q ss_pred CCcCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEeccCCC
Q 020649 138 KSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKY 213 (323)
Q Consensus 138 ~p~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~ 213 (323)
++||++||||+ |++++++|+|++.|++.. .+++|.|+|++|||.| .|++.++++. +.|++++.+ |+.
T Consensus 75 --~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~e--p~~ 145 (347)
T PRK08652 75 --VDGVYVYGTGACDAKGGVAAILLALEELGKEF--EDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLE--PTD 145 (347)
T ss_pred --EECCEEEeccchhhhHHHHHHHHHHHHHhhcc--cCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEec--CCC
Confidence 57899999998 899999999999998543 4579999999999987 5999988762 347777664 432
Q ss_pred CceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccc
Q 020649 214 PTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMI 293 (323)
Q Consensus 214 ~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg~~~nvi 293 (323)
. .+. ..++|..+++|+++|+++|++.|+.|.||+..+++++..|+++........ .++++++.++||...|+|
T Consensus 146 ~--~i~----~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~-~~~~~~~~i~gg~~~nvi 218 (347)
T PRK08652 146 L--KVA----IAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYF-DPHIGIQEIIGGSPEYSI 218 (347)
T ss_pred C--cee----eecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhccc-CCCCcceeeecCCCCCcc
Confidence 1 222 234699999999999999999999999999999999999988753322112 235778889999999999
Q ss_pred cceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 294 PDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 294 P~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
|++|++++|+|++|.++.+++.++|++++
T Consensus 219 P~~~~~~~diR~~~~~~~~~v~~~i~~~~ 247 (347)
T PRK08652 219 PALCRLRLDARIPPEVEVEDVLDEIDPIL 247 (347)
T ss_pred CCcEEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999875
No 38
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=1.3e-37 Score=291.16 Aligned_cols=240 Identities=16% Similarity=0.123 Sum_probs=196.1
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEeccCcccCcCCCCCccCC
Q 020649 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKS 139 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~p 139 (323)
+++++++++|++|||++++|.++++|+.++|+++|++++... .+|++++++++ +|+|+|+||+||||... |+.
T Consensus 6 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~i~~~~~~-~~~l~~~~H~DtVp~~~----p~~- 78 (348)
T PRK04443 6 LEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVDE-AGNARGPAGDG-PPLVLLLGHIDTVPGDI----PVR- 78 (348)
T ss_pred HHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEcCCC-CCEEEEEeeccccCCCC----CcE-
Confidence 568899999999999999999999999999999999987653 47999998543 58999999999999532 221
Q ss_pred cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcCccCCccEEEEEeccCCCCc
Q 020649 140 KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHKYPT 215 (323)
Q Consensus 140 ~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~ 215 (323)
++||++||||+ ||++++++.|+++| +.+++++|.|++++|||.|+ |...++.+++ ..|++++.+ |+..
T Consensus 79 ~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~E--pt~~- 150 (348)
T PRK04443 79 VEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGE--PSGW- 150 (348)
T ss_pred eeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeC--CCCc-
Confidence 57899999998 89999999999998 34688999999999999984 5555555544 578888764 3321
Q ss_pred eeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhc---cccCCCCCceEEEEEEEcCCcCcc
Q 020649 216 GVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVS---REIDPLDSQVVSVAMINGGSSYNM 292 (323)
Q Consensus 216 ~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~---~~~~~~~~~~~~i~~i~gg~~~nv 292 (323)
+.+ ...++|..+++++++|+++|||.| |+||+..+++++..|+++.. .....+...++|++.++ ...|+
T Consensus 151 ~~i----~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n~ 222 (348)
T PRK04443 151 DGI----TLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSDG 222 (348)
T ss_pred cce----eeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCCC
Confidence 112 123459999999999999999987 79999999999999987643 11122345688998888 45699
Q ss_pred ccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 293 IPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 293 iP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
||++|++.+|+|++|+++.+++.++|++++
T Consensus 223 iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~ 252 (348)
T PRK04443 223 LTVEAEMTVGLRLPPGLSPEEAREILDALL 252 (348)
T ss_pred CCceEEEEEEEccCCCCCHHHHHHHHHHhC
Confidence 999999999999999999999999999875
No 39
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=4.9e-37 Score=296.06 Aligned_cols=256 Identities=15% Similarity=0.151 Sum_probs=192.8
Q ss_pred hhHHHHHHHHHHHhcCCCCCccc----------HHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEeccCc
Q 020649 57 DTVNWMKKMRRQIHENPELAYEE----------FETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDA 126 (323)
Q Consensus 57 ~~~~~l~~l~~~l~~ips~s~~e----------~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dt 126 (323)
+..+++++++++|+++||.++++ .++++|+.++|+++|++++.++...+++++++.+ +|+|+|+||+||
T Consensus 8 ~~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~~-~~~lll~gH~Dv 86 (444)
T PRK07205 8 KVQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIGQG-EELLAILCHLDV 86 (444)
T ss_pred HhHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEecCC-CcEEEEEEeecc
Confidence 35688999999999999998754 5688999999999999987665445667777543 589999999999
Q ss_pred ccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcCcc
Q 020649 127 LPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVL 198 (323)
Q Consensus 127 vp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~ 198 (323)
||+++.++|.++| ++||+|||||+ ||+++++|.|+++|++.+..++++|.|+|++|||.|+ |++.+++....
T Consensus 87 Vp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~ 166 (444)
T PRK07205 87 VPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQ 166 (444)
T ss_pred CCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCC
Confidence 9998888998777 57999999998 8999999999999999888889999999999999984 88888764211
Q ss_pred C----CccE---EE---------EEeccCCCCceeEEe--------------eecc---------ccce----eeEEEEE
Q 020649 199 E----NVEA---IF---------GLHLVHKYPTGVVAS--------------RPGD---------FLAG----CGSFKAK 235 (323)
Q Consensus 199 ~----~~d~---~~---------~~~~~~~~~~~~~~~--------------~~g~---------~~~G----~~~~~i~ 235 (323)
. ..|. ++ .+..++ +..... ..|. ...| ..+.+++
T Consensus 167 ~~~~~~~~~~~~v~~~ekG~~~~~i~~~~---~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~ 243 (444)
T PRK07205 167 ATMGFAPDSSFPLTYAEKGLLQAKLVGPG---SDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVT 243 (444)
T ss_pred CCeeECCCCCCceEEEEeceEEEEEEeCC---ccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEE
Confidence 0 0110 00 011111 110000 0000 0112 1234899
Q ss_pred EEecCCccCCCCCCCCHHHHHHHHHHHHHHhh-----cc--------------ccC-CCCCceEEEEEEEcCCcCccccc
Q 020649 236 ISGKGGHAAIPQHCIDPILAVSSSVISLQNIV-----SR--------------EID-PLDSQVVSVAMINGGSSYNMIPD 295 (323)
Q Consensus 236 v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~-----~~--------------~~~-~~~~~~~~i~~i~gg~~~nviP~ 295 (323)
++|+++|+|.|+.|.||+..+++++..++... .+ ..+ ..+.+++|++.+ |+||+
T Consensus 244 v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~~------nvvP~ 317 (444)
T PRK07205 244 VLGKSVHAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAGL------TITKE 317 (444)
T ss_pred EEeEEcccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEEE------EEECC
Confidence 99999999999999999999999998886421 00 001 123567888653 89999
Q ss_pred eEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 296 SATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 296 ~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
+|++++|+|++|+++.+++.++|++++
T Consensus 318 ~a~~~ld~R~~p~~~~e~v~~~i~~~~ 344 (444)
T PRK07205 318 KSEIRIDIRIPVLADKEKLVQQLSQKA 344 (444)
T ss_pred EEEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999998875
No 40
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=5.6e-37 Score=296.77 Aligned_cols=255 Identities=13% Similarity=0.076 Sum_probs=194.6
Q ss_pred hHHHHHHHHHHHhcCCCCCcc------------cHHHHHHHHHHHHHcCCcEEeccCCceEEEEE-CCCCCCeeEEEecc
Q 020649 58 TVNWMKKMRRQIHENPELAYE------------EFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGSPPFVALRADM 124 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~-~~~~~~~ill~~H~ 124 (323)
+++++++++++|++|||.+.+ +.++++|+.++|+++||+++..+ |+++.+ +++++|+|+|+|||
T Consensus 11 ~~~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~~~l~~~gH~ 87 (466)
T TIGR01886 11 RKDALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGDERLGIIGHM 87 (466)
T ss_pred hHHHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCCCEEEEEeec
Confidence 567899999999999999643 46688999999999999988654 444444 33346899999999
Q ss_pred CcccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcC
Q 020649 125 DALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEG 196 (323)
Q Consensus 125 Dtvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~ 196 (323)
||||+++ .|.++| ++||+|||||+ ||+++++|.|+++|++.+..++++|.|+++++||.|+ |++++++++
T Consensus 88 DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~ 165 (466)
T TIGR01886 88 DVVPAGE--GWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDMDYYFKHE 165 (466)
T ss_pred ccCCCCC--CCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccHHHHHhcC
Confidence 9999973 698777 67899999998 8999999999999999998899999999999999984 999998875
Q ss_pred ccCCccEEEEEec-------cCCCCceeEEee-----------------------------e-------------ccccc
Q 020649 197 VLENVEAIFGLHL-------VHKYPTGVVASR-----------------------------P-------------GDFLA 227 (323)
Q Consensus 197 ~~~~~d~~~~~~~-------~~~~~~~~~~~~-----------------------------~-------------g~~~~ 227 (323)
. ..|++++.+. +++.....+..+ . ...++
T Consensus 166 ~--~~d~~~~~d~~~~~~~ge~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~k 243 (466)
T TIGR01886 166 E--TPDFGFSPDAEFPIINGEKGNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAAYESFLADK 243 (466)
T ss_pred c--CCCEEEECCCCceeEEEecceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHHHHHHhhc
Confidence 4 2565543211 111100000000 0 00122
Q ss_pred eee---------EEEEEEEecCCccCCCCCCCCHHHHHHHHHHHH----------HHhhc--------------cccCCC
Q 020649 228 GCG---------SFKAKISGKGGHAAIPQHCIDPILAVSSSVISL----------QNIVS--------------REIDPL 274 (323)
Q Consensus 228 G~~---------~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l----------~~~~~--------------~~~~~~ 274 (323)
|.. |++|+++|+++|+|.|+.|+|||..|++++..+ +.+.. ...+..
T Consensus 244 g~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 323 (466)
T TIGR01886 244 ASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLGIAFHDELM 323 (466)
T ss_pred cCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCCCcccccCc
Confidence 322 788999999999999999999999999988773 22211 001224
Q ss_pred CCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHhC
Q 020649 275 DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVLI 323 (323)
Q Consensus 275 ~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i~ 323 (323)
...++|+|.|+||.. | ++|++.+|+|++|+++.+++.++|+++++
T Consensus 324 g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~ 368 (466)
T TIGR01886 324 GDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFG 368 (466)
T ss_pred CceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 567999999999865 4 89999999999999999999999998753
No 41
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-36 Score=289.89 Aligned_cols=260 Identities=23% Similarity=0.329 Sum_probs=201.1
Q ss_pred hHHHHHHHHHHHhcCCCCC-cccHHHHHHHHHHHHHcCCcEEecc-C----CceEEEEECCCC-CCeeEEEeccCcccCc
Q 020649 58 TVNWMKKMRRQIHENPELA-YEEFETSELIRRELDQLGIAYRWPV-A----KTGVVATVGSGS-PPFVALRADMDALPIQ 130 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s-~~e~~~~~~l~~~l~~~G~~~~~~~-~----~~nvia~~~~~~-~~~ill~~H~Dtvp~~ 130 (323)
.++++++++++++++||.+ ..+.++++|++++|+++|+.++... . ..|++++++++. +|+|+|+||+||||++
T Consensus 11 ~~~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~DvVP~g 90 (409)
T COG0624 11 LLDDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHLDVVPAG 90 (409)
T ss_pred hhHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccccccCCC
Confidence 4566779999999999999 8889999999999999999877543 2 359999996543 3999999999999999
Q ss_pred CCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcCc---cC
Q 020649 131 ELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGV---LE 199 (323)
Q Consensus 131 ~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~---~~ 199 (323)
+...|.++| ++||+|||||+ ||++++++.|++.+.+.+..++.+|.+++++|||.|+ |+..++.++. ..
T Consensus 91 ~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~~~ 170 (409)
T COG0624 91 GGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEALGI 170 (409)
T ss_pred CcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhhcc
Confidence 888897776 56799999998 8999999999999999888899999999999999995 7777776643 13
Q ss_pred CccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCC--CCCCCC----HHHHHHHHHHHHHHhhccccCC
Q 020649 200 NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI--PQHCID----PILAVSSSVISLQNIVSREIDP 273 (323)
Q Consensus 200 ~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~--p~~g~N----Ai~~~~~~i~~l~~~~~~~~~~ 273 (323)
.+|+++..++......+..... .++|..+++|+++|+++|+|. |+.+.| |+..+.+++..+.++..+....
T Consensus 171 ~~d~~i~~E~~~~~~~~~~~~~---~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~~~ 247 (409)
T COG0624 171 RPDYEIVGEPTLESEGGDIIVV---GHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGFDG 247 (409)
T ss_pred CCCEEEeCCCCCcccCCCeEEE---cceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccccC
Confidence 4677776543000011221111 346999999999999999997 999999 5555555555544332211110
Q ss_pred CCCceEEEEEEEcCCc--------CccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 274 LDSQVVSVAMINGGSS--------YNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 274 ~~~~~~~i~~i~gg~~--------~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
+.+++++.+.++.. .|+||++|++.+|+|+.|.++.+++.++|++.+
T Consensus 248 --~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i 302 (409)
T COG0624 248 --PLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAEL 302 (409)
T ss_pred --CccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHH
Confidence 35667776665544 599999999999999999999888777777665
No 42
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=6.5e-37 Score=287.71 Aligned_cols=243 Identities=20% Similarity=0.270 Sum_probs=198.5
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEecc------CCceEEEEE-CCCCCCeeEEEeccCcccCcCCCC
Q 020649 62 MKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV------AKTGVVATV-GSGSPPFVALRADMDALPIQELVE 134 (323)
Q Consensus 62 l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~nvia~~-~~~~~~~ill~~H~Dtvp~~~~~~ 134 (323)
+.++++++++||+++++|.++++||.++|+++|++++..+ .++|+++++ +++++|+|+|.||+||||+++ .
T Consensus 2 ~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~--~ 79 (361)
T TIGR01883 2 LKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA--G 79 (361)
T ss_pred hHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC--C
Confidence 5678999999999999999999999999999999987653 368999999 444458999999999999754 2
Q ss_pred CccCC-cCCCeEeeCCc-------cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcCccCCccEEE
Q 020649 135 WEHKS-KIDGKMHACGH-------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIF 205 (323)
Q Consensus 135 w~~~p-~~~g~l~g~G~-------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~ 205 (323)
| .+ +++|++||||+ |++++++|++++.|++.+ .++++|.|+|++|||.|+ |++.+.+.+. ..++.+
T Consensus 80 ~--~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~ 154 (361)
T TIGR01883 80 P--EPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGY 154 (361)
T ss_pred C--CceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeE
Confidence 3 33 67899999984 599999999999998865 577899999999999884 9988876532 245655
Q ss_pred EEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccC-CCCCCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEE
Q 020649 206 GLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMI 284 (323)
Q Consensus 206 ~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i 284 (323)
.++ ++.+.+.+... .+|..+++++++|+++|++ .|+.|+||+..+++++..|+... . ....++|++.+
T Consensus 155 ~~~--~~~~~~~i~~~----~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~---~--~~~~~~~i~~i 223 (361)
T TIGR01883 155 CLD--APGEVGNIQLA----APTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR---I--DEETTANIGSF 223 (361)
T ss_pred EEe--CCCCcceEEec----CCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC---C--CCcccccccee
Confidence 543 33233443322 3589999999999999986 79999999999999999886531 1 12357899999
Q ss_pred EcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 285 NGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 285 ~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
+||...|+||++|++.+|+|..|..+.+.+++++++.+
T Consensus 224 ~gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i 261 (361)
T TIGR01883 224 SGGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERF 261 (361)
T ss_pred ecCCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888887777765
No 43
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=3.5e-36 Score=291.67 Aligned_cols=255 Identities=15% Similarity=0.190 Sum_probs=192.8
Q ss_pred hHHHHHHHHHHHhcCCCCCcc------------cHHHHHHHHHHHHHcCCcEEeccCCceEEEEE-CCCCCCeeEEEecc
Q 020649 58 TVNWMKKMRRQIHENPELAYE------------EFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSGSPPFVALRADM 124 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~-~~~~~~~ill~~H~ 124 (323)
+++++++++++|++|||.+.+ +.++++|+.++|+++|++++..+ |+++++ .+++.|+|+|+||+
T Consensus 12 ~~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~---n~~~~~~~~~~~~~l~l~gH~ 88 (466)
T PRK07318 12 RKDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD---NYAGHIEYGEGEEVLGILGHL 88 (466)
T ss_pred hHHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec---CccceEEECCCCCEEEEEEec
Confidence 567899999999999999865 46899999999999999988653 666665 22335899999999
Q ss_pred CcccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcC
Q 020649 125 DALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEG 196 (323)
Q Consensus 125 Dtvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~ 196 (323)
||||+++ .|.++| ++||+|||||+ ||+++++++|++.|++.+..++++|.|+|++|||.|+ |+++++++.
T Consensus 89 DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~G~~~l~~~~ 166 (466)
T PRK07318 89 DVVPAGD--GWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGWKCMDYYFEHE 166 (466)
T ss_pred CCCCCCC--CCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCchhHHHHHHhC
Confidence 9999864 698777 47999999998 8999999999999999888888999999999999985 999998863
Q ss_pred ccCC----ccE---EEEEec-----------------------cCCCCceeE------Eee---------------eccc
Q 020649 197 VLEN----VEA---IFGLHL-----------------------VHKYPTGVV------ASR---------------PGDF 225 (323)
Q Consensus 197 ~~~~----~d~---~~~~~~-----------------------~~~~~~~~~------~~~---------------~g~~ 225 (323)
.... .|. ++..++ +++.+.+.+ ... ....
T Consensus 167 ~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (466)
T PRK07318 167 EAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAAFEAFLAENG 246 (466)
T ss_pred CCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHHHHHHHhhcC
Confidence 2110 111 111110 011111110 000 0001
Q ss_pred ccee-----eEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHh------h----c--------------cccCCCCC
Q 020649 226 LAGC-----GSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNI------V----S--------------REIDPLDS 276 (323)
Q Consensus 226 ~~G~-----~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~------~----~--------------~~~~~~~~ 276 (323)
++|. .|++|+++|+++|++.|+.|.|||..|+++|..|+.. . . ......+.
T Consensus 247 ~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 326 (466)
T PRK07318 247 LKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIAYEDDVMGD 326 (466)
T ss_pred ceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCCcccCCCccC
Confidence 2343 4799999999999999999999999999999998641 0 0 00112235
Q ss_pred ceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 277 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 277 ~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
.++|++.++||... +|++++|+|++|+.+.+++.++|++++
T Consensus 327 ~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~ 367 (466)
T PRK07318 327 LTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLI 367 (466)
T ss_pred eEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 68999999998542 799999999999999999999998875
No 44
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=7.5e-36 Score=284.60 Aligned_cols=245 Identities=20% Similarity=0.218 Sum_probs=193.3
Q ss_pred HHHHHHHHhcCCCCCc----------ccHHHHHHHHHHHHHcCCcEEeccCCceEEEEEC-CCCC-CeeEEEeccCcccC
Q 020649 62 MKKMRRQIHENPELAY----------EEFETSELIRRELDQLGIAYRWPVAKTGVVATVG-SGSP-PFVALRADMDALPI 129 (323)
Q Consensus 62 l~~l~~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~-~~~~-~~ill~~H~Dtvp~ 129 (323)
+++.+.++++|||.++ .+.++++||.++|+++|++....++.+||+|+++ ++++ |+|+|+||+||||+
T Consensus 3 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~ 82 (404)
T PRK13381 3 LTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDV 82 (404)
T ss_pred HHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCc
Confidence 5667888999999997 3688999999999999997555567889999994 4444 99999999999998
Q ss_pred cCC---------------------CCCccC---C-----cCCCeEeeCCc-------cHHHHHHHHHHHHHHHccCCCCe
Q 020649 130 QEL---------------------VEWEHK---S-----KIDGKMHACGH-------DAHVAMLLGAAKILQEMRETLKG 173 (323)
Q Consensus 130 ~~~---------------------~~w~~~---p-----~~~g~l~g~G~-------k~~~a~~l~a~~~l~~~~~~~~~ 173 (323)
++. ..|..+ | ..+|++||||+ |+++|++|.|++.|++.+ .+++
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g 161 (404)
T PRK13381 83 GLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHG 161 (404)
T ss_pred cCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCC
Confidence 653 112211 1 24778999885 899999999999998774 4678
Q ss_pred EEEEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccC-CCCCCCC
Q 020649 174 TVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCID 251 (323)
Q Consensus 174 ~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~-~p~~g~N 251 (323)
+|.|+|+++||.| .|++.++.+++ ..|++++++. +.+. .+.. .++|..+++|+++|+++|++ .|+.|.|
T Consensus 162 ~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~--~~~~-~i~~----~~~G~~~~~v~v~Gk~aHa~~~p~~g~N 232 (404)
T PRK13381 162 DIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDC--CELG-EVVY----ENFNAASAEITITGVTAHPMSAKGVLVN 232 (404)
T ss_pred CEEEEEEcccccccccHHHHHHhcC--CCCEEEEecC--CCcc-eEEE----ecCcceEEEEEEEeEecCCCCCcccCcC
Confidence 9999999999998 59999887644 3687777653 2333 2221 24689999999999999988 4899999
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 252 PILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 252 Ai~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
|+..+++++.+|+++..+........+++++.++|+ |++|++++|+|+.|.++.+++.++|++++
T Consensus 233 AI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~~~ 297 (404)
T PRK13381 233 PILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEEVV 297 (404)
T ss_pred HHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 999999999999876433222223346888888764 89999999999999999999999888775
No 45
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=6.3e-35 Score=271.72 Aligned_cols=231 Identities=14% Similarity=0.107 Sum_probs=185.9
Q ss_pred HHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEeccCcccCcCCCCCccCCcCCCe
Q 020649 65 MRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKIDGK 144 (323)
Q Consensus 65 l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~ 144 (323)
+++++++|||++++|.++++||+++|+++|+++.. +..+|+++..++ ++|+|+|+|||||||. .|+.. ++||+
T Consensus 2 ~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~-~~~~~~~~~~~~-~~~~i~~~~H~D~vp~----~~~~~-~~~g~ 74 (336)
T TIGR01902 2 LLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLII-DDAGNFILGKGD-GHKKILLAGHVDTVPG----YIPVK-IEGGL 74 (336)
T ss_pred hHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEEE-CCCCcEEEEeCC-CCceEEEEccccccCC----CcccE-EeCCE
Confidence 57889999999999999999999999999999854 345788887643 3699999999999984 24332 67899
Q ss_pred EeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcCccCCccEEEEEeccCCCCceeEEe
Q 020649 145 MHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHKYPTGVVAS 220 (323)
Q Consensus 145 l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 220 (323)
+||||+ |++++++|+|++.|++. ..+|.|++++|||.|+ |++.++++.. .+++++. +|+.. +.+
T Consensus 75 i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~--ept~~-~~i-- 142 (336)
T TIGR01902 75 LYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVG--EPSGA-EGI-- 142 (336)
T ss_pred EEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEe--cCCCC-cce--
Confidence 999998 89999999999999864 3589999999999984 9999988743 3455654 34321 112
Q ss_pred eeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccceEEEE
Q 020649 221 RPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVA 300 (323)
Q Consensus 221 ~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg~~~nviP~~a~~~ 300 (323)
...++|..+++++++|+++|++.|. ||+..+.+++..|.+.... ......++++++.++||...|+||++|+++
T Consensus 143 --~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~i~gg~~~nvIP~~a~~~ 216 (336)
T TIGR01902 143 --TLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQ-PENYDKPSIVPTIIRFGESYNDTPAKLELH 216 (336)
T ss_pred --eeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhcc-ccCCCCCcceeEEEEccCCCcCCCceEEEE
Confidence 1224599999999999999999875 5999999999998742211 111223578899999999999999999999
Q ss_pred EEEeccChhhHHHHHHHHHH
Q 020649 301 GTFRAFNKKRFNALRERIEE 320 (323)
Q Consensus 301 ~diR~~~~~~~~~~~~~i~~ 320 (323)
+|+|++|+++.+++.+++++
T Consensus 217 idiR~~p~~~~~~~~~~i~~ 236 (336)
T TIGR01902 217 FDLRYPPNNKPEEAIKEITD 236 (336)
T ss_pred EEEeeCCCCCHHHHHHHHHh
Confidence 99999999999999888875
No 46
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=8e-35 Score=277.86 Aligned_cols=247 Identities=19% Similarity=0.216 Sum_probs=192.8
Q ss_pred HHHHHHHHHHhcCCCCCcc----------cHHHHHHHHHHHHHcCCc-EEeccCCceEEEEECCC---CCCeeEEEeccC
Q 020649 60 NWMKKMRRQIHENPELAYE----------EFETSELIRRELDQLGIA-YRWPVAKTGVVATVGSG---SPPFVALRADMD 125 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~----------e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~---~~~~ill~~H~D 125 (323)
+.+++.++++++|||.+.+ |.++++||+++|+++|++ ++. +..+||++.+++. ++|+|+|+||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~-~~~~~v~~~~~g~~~~~~~~i~l~~H~D 80 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTL-DENGYVMATLPANVDKDVPTIGFIAHMD 80 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEE-CCCeEEEEEecCCCCCCCCeEEEEEecc
Confidence 4567889999999999966 789999999999999997 554 4567899999432 359999999999
Q ss_pred cccCcCC---------------------CCCccCC--------cCCCeEeeCC-----c--cHHHHHHHHHHHHHHHccC
Q 020649 126 ALPIQEL---------------------VEWEHKS--------KIDGKMHACG-----H--DAHVAMLLGAAKILQEMRE 169 (323)
Q Consensus 126 tvp~~~~---------------------~~w~~~p--------~~~g~l~g~G-----~--k~~~a~~l~a~~~l~~~~~ 169 (323)
|||+.+. +.|+++| ..++.+|||| + |++++++|+|++.|++.+.
T Consensus 81 ~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~ 160 (408)
T PRK05469 81 TAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE 160 (408)
T ss_pred CCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC
Confidence 9987441 3355544 1235688866 2 8999999999999998766
Q ss_pred CCCeEEEEEeEcCCCCCCcHHHHHhcCccCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccC-CCCC
Q 020649 170 TLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQH 248 (323)
Q Consensus 170 ~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~-~p~~ 248 (323)
.++++|.|+|+++||.|.|++.++.++. +.|+.+.++.. +.+.+... .+|..+++|+++|+++|++ .|+.
T Consensus 161 ~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~~---~~g~~~~~----~~g~~~~~i~v~Gk~~Ha~~~p~~ 231 (408)
T PRK05469 161 IKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDGG---PLGELEYE----NFNAASAKITIHGVNVHPGTAKGK 231 (408)
T ss_pred CCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecCC---CcceEEec----cCceeEEEEEEeeecCCCCCCccc
Confidence 6789999999999998888888875433 35666655432 34444322 3478899999999999987 5899
Q ss_pred CCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 249 CIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 249 g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
|.||+..+++++..|+++..+........+++++.++|| |++|++++|+|+.|.++.+.+.++|++++
T Consensus 232 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~~~ 299 (408)
T PRK05469 232 MVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQEIA 299 (408)
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 999999999999988765422211112245788888876 79999999999999999999999999876
No 47
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=5.7e-34 Score=274.06 Aligned_cols=251 Identities=14% Similarity=0.107 Sum_probs=185.4
Q ss_pred HHHHHHHHHHhcCCCCCcc------------cHHHHHHHHHHHHHcCCcEEeccCCceEEEE--ECCCCCCeeEEEeccC
Q 020649 60 NWMKKMRRQIHENPELAYE------------EFETSELIRRELDQLGIAYRWPVAKTGVVAT--VGSGSPPFVALRADMD 125 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~--~~~~~~~~ill~~H~D 125 (323)
++++++++++++|||++.+ +.++++|+.++|+++|++++... |+.+. ++. ..|+|+|+||+|
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~---~~~~~~~~~~-~~~~l~l~gH~D 77 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENVD---NYAGYAEYGQ-GEEYLGILGHLD 77 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEec---CceEEEEeCC-CCCeEEEEeecC
Confidence 4578899999999998732 36899999999999999987443 44433 332 357999999999
Q ss_pred cccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcCc
Q 020649 126 ALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGV 197 (323)
Q Consensus 126 tvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~ 197 (323)
|||+++ .|.++| ++||+|||||+ ||++++++.|++.|++.+.+++++|.|+|++|||.|+ |+..++++..
T Consensus 78 ~Vp~~~--~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 155 (447)
T TIGR01887 78 VVPAGD--GWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEE 155 (447)
T ss_pred CCCCCC--CCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcC
Confidence 999875 698777 57899999998 8999999999999999888889999999999999985 8888887532
Q ss_pred cC----CccE---EEEEec----------------------cCCCCceeEEe--eeccccc-------------------
Q 020649 198 LE----NVEA---IFGLHL----------------------VHKYPTGVVAS--RPGDFLA------------------- 227 (323)
Q Consensus 198 ~~----~~d~---~~~~~~----------------------~~~~~~~~~~~--~~g~~~~------------------- 227 (323)
.. ..|. ++.... ..+++++.+.. .....++
T Consensus 156 ~~~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~ 235 (447)
T TIGR01887 156 APDIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELE 235 (447)
T ss_pred CCCEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcc
Confidence 11 0121 111110 01222222100 0000111
Q ss_pred eee-----EEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHH--Hhhcc---------------------c-cCCCCCce
Q 020649 228 GCG-----SFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQ--NIVSR---------------------E-IDPLDSQV 278 (323)
Q Consensus 228 G~~-----~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~--~~~~~---------------------~-~~~~~~~~ 278 (323)
|.. +++|+++|+++|+|.|+.|.||++.|++++..+. +...+ . ....+.++
T Consensus 236 g~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t 315 (447)
T TIGR01887 236 GSFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLT 315 (447)
T ss_pred eEEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcE
Confidence 444 7999999999999999999999999999999986 21100 0 01124568
Q ss_pred EEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHH
Q 020649 279 VSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEV 321 (323)
Q Consensus 279 ~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~ 321 (323)
+|++.|+|| +|++|++++|+|++|+++.+++.+++.+.
T Consensus 316 ~nvg~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~ 353 (447)
T TIGR01887 316 MNVGVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELAK 353 (447)
T ss_pred EEEEEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHHH
Confidence 999999988 38999999999999999999877776643
No 48
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=6.6e-34 Score=278.73 Aligned_cols=254 Identities=15% Similarity=0.203 Sum_probs=190.7
Q ss_pred hhHHHHHHHHHHHhcCCCCCc-----cc----HHHHHHHHHHHHHcCCcEEeccCCceE-E-EEECCCCCCeeEEEeccC
Q 020649 57 DTVNWMKKMRRQIHENPELAY-----EE----FETSELIRRELDQLGIAYRWPVAKTGV-V-ATVGSGSPPFVALRADMD 125 (323)
Q Consensus 57 ~~~~~l~~l~~~l~~ips~s~-----~e----~~~~~~l~~~l~~~G~~~~~~~~~~nv-i-a~~~~~~~~~ill~~H~D 125 (323)
++.++++++++++++|||++. .| .++++||.++|+++|++++.. .|+ + +++++...|+|+|+||||
T Consensus 43 ~~~~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~~~~~~---~~~v~~~~~~g~~~~~l~l~gH~D 119 (520)
T PRK06156 43 KYGAAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGLDYRNV---DNRVLEIGLGGSGSDKVGILTHAD 119 (520)
T ss_pred hhHHHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCCeEEec---CCeEEEEEecCCCCCeEEEEEecC
Confidence 466889999999999999874 23 356799999999999998643 354 4 666544458999999999
Q ss_pred cccCcCCCCCcc-----CC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHH
Q 020649 126 ALPIQELVEWEH-----KS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDM 192 (323)
Q Consensus 126 tvp~~~~~~w~~-----~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~ 192 (323)
|||++. ..|.+ +| ++||+|||||+ |+++++++.|++.|++.+.+++++|.|+|++|||.|+ |++.+
T Consensus 120 vVp~~~-~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~ 198 (520)
T PRK06156 120 VVPANP-ELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYY 198 (520)
T ss_pred ccCCCC-ccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHH
Confidence 999865 47988 77 46999999998 8999999999999998888888999999999999985 99999
Q ss_pred HhcCccCCccEEEEEe-------ccCCC--------------------------Ccee------EEeeec----------
Q 020649 193 IQEGVLENVEAIFGLH-------LVHKY--------------------------PTGV------VASRPG---------- 223 (323)
Q Consensus 193 ~~~~~~~~~d~~~~~~-------~~~~~--------------------------~~~~------~~~~~g---------- 223 (323)
+.++. ..++.++++ .+++. ..+. +.....
T Consensus 199 ~~~~~--~~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~ 276 (520)
T PRK06156 199 LERYT--PPDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQ 276 (520)
T ss_pred HHhcC--CCCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHH
Confidence 87753 234433221 11210 0000 000000
Q ss_pred -------cccceee---------EEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhcc------------------
Q 020649 224 -------DFLAGCG---------SFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR------------------ 269 (323)
Q Consensus 224 -------~~~~G~~---------~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~------------------ 269 (323)
..++|.. |++|+++|+++|+|.|+.|.|||..+++++..|++....
T Consensus 277 ~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~ 356 (520)
T PRK06156 277 AAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDY 356 (520)
T ss_pred HHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCC
Confidence 0011333 899999999999999999999999999999998752100
Q ss_pred ---------ccCCCCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 270 ---------EIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 270 ---------~~~~~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
..+..+..+++++.+.+|. ++|++++|+|++|+++.+++.++|++++
T Consensus 357 ~g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~~i 412 (520)
T PRK06156 357 LGEKFGVAYKDDFMGPLTLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIADAL 412 (520)
T ss_pred ccCcCCccccCCCccCcEEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHHHH
Confidence 0111234578888888775 5899999999999999999999998865
No 49
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=6.4e-34 Score=275.43 Aligned_cols=243 Identities=19% Similarity=0.237 Sum_probs=193.9
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEEC-C-C--CCCeeEEEeccCcccCcCC---
Q 020649 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVG-S-G--SPPFVALRADMDALPIQEL--- 132 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~-~-~--~~~~ill~~H~Dtvp~~~~--- 132 (323)
+.++++++++++||++|++|.++++|+.++++++|++++.+. .+|+++++. . + ..|+|+|.|||||||+++.
T Consensus 10 ~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d~-~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~ 88 (485)
T PRK15026 10 QPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERDQ-VGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTV 88 (485)
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEEe-cCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCcc
Confidence 668899999999999999999999999999999999988653 578888873 1 2 3589999999999998653
Q ss_pred CCCccCC----cCCCeEeeCCc------cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcCccCCc
Q 020649 133 VEWEHKS----KIDGKMHACGH------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENV 201 (323)
Q Consensus 133 ~~w~~~p----~~~g~l~g~G~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~ 201 (323)
.+|.++| ++||++||||+ |++++++|+++ ++.+. .+++|.++|++|||.|+ |++.+... .+ +.
T Consensus 89 ~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~~-~~-~~ 162 (485)
T PRK15026 89 HDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQSN-WL-QA 162 (485)
T ss_pred ccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhhc-cC-Cc
Confidence 2687776 47899999987 57788877655 44444 37899999999999995 99988653 33 57
Q ss_pred cEEEEEeccCCCCceeE--Eeeecc------------ccceeeEEEEEEEe-cCCccC-CCCCCC-CHHHHHHHHHHHHH
Q 020649 202 EAIFGLHLVHKYPTGVV--ASRPGD------------FLAGCGSFKAKISG-KGGHAA-IPQHCI-DPILAVSSSVISLQ 264 (323)
Q Consensus 202 d~~~~~~~~~~~~~~~~--~~~~g~------------~~~G~~~~~i~v~G-~~~Hs~-~p~~g~-NAi~~~~~~i~~l~ 264 (323)
|+++++++ . ..+.+ +++-|. ..+|..+++|+++| +++||+ .|+.|+ ||+..|+++|..+.
T Consensus 163 ~~~i~~e~--~-~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~ 239 (485)
T PRK15026 163 DILINTDS--E-EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHA 239 (485)
T ss_pred CEEEEeCC--C-CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhH
Confidence 88888754 3 22322 221000 11477889999999 999999 799999 99999999998854
Q ss_pred HhhccccCCCCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 265 NIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 265 ~~~~~~~~~~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
. ..+++++.|+||+..|+||++|++.+++|.......+++.+++.+.+
T Consensus 240 ~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~ 287 (485)
T PRK15026 240 E----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEIL 287 (485)
T ss_pred h----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHH
Confidence 2 35789999999999999999999999999988888888877776654
No 50
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=3e-34 Score=273.89 Aligned_cols=248 Identities=17% Similarity=0.181 Sum_probs=189.0
Q ss_pred HHHHHHHHHHhcCCCCCc----------ccHHHHHHHHHHHHHcCCc-EEeccCCceEEEEE-CCCC--CCeeEEEeccC
Q 020649 60 NWMKKMRRQIHENPELAY----------EEFETSELIRRELDQLGIA-YRWPVAKTGVVATV-GSGS--PPFVALRADMD 125 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~-~~~~--~~~ill~~H~D 125 (323)
+++++.+.++++|+|+|+ .|+++++||+++|+++|++ ++.++..+||+|++ ++.+ .|+|+|.+|||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 456677777888888886 4558999999999999997 77764478999998 4343 39999999999
Q ss_pred cccCcCCC-------------------------CCccCC-----------cCCCeEeeCCccHHHHHHHHHHHHHHHccC
Q 020649 126 ALPIQELV-------------------------EWEHKS-----------KIDGKMHACGHDAHVAMLLGAAKILQEMRE 169 (323)
Q Consensus 126 tvp~~~~~-------------------------~w~~~p-----------~~~g~l~g~G~k~~~a~~l~a~~~l~~~~~ 169 (323)
|||..... .|.++| .+++.+||+++|+++|++|+|++.|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99842211 455554 245699999999999999999999998644
Q ss_pred CCCeEEEEEeEcCCCCCCcHHHHHhcCccCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCC-CC
Q 020649 170 TLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIP-QH 248 (323)
Q Consensus 170 ~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p-~~ 248 (323)
.++++|.|+|+++||.|.|++.+..++. +.++.+.++. .|.+.+..+. .|..+++|+++|+++|++.+ +.
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i~g---ep~g~i~~~~----~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTVDG---GPLGELEYET----FSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEeCC---CCCCeEEEcc----ccceEEEEEEEEEecCcccChHH
Confidence 4688999999999999888888765543 4566665542 4556554432 37899999999999999964 67
Q ss_pred CCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 249 CIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 249 g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
+.||+..+++++..++.... + ...+-+++.+++|. .|.||++|++++|+|..+.++.+++.++|++++
T Consensus 234 g~nAi~~a~~~~~~l~~~~~----~-~~t~~~~g~i~~g~-i~giPd~a~l~~diR~~~~e~~e~i~~~i~~i~ 301 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDDR----P-EYTEGREGFFHLLS-IDGTVEEAKLHYIIRDFEKENFQERKELMKRIV 301 (410)
T ss_pred HHHHHHHHHHHHHhcCCcCC----C-ccccceeEEEEEEe-EEEecCEEEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 99999999988776654311 1 01111234455553 566999999999999999999999999998876
No 51
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.2e-33 Score=268.28 Aligned_cols=243 Identities=16% Similarity=0.239 Sum_probs=190.2
Q ss_pred HHHHHHHHHHhcCCCC----------CcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEE-CCC-CCCeeEEEeccCcc
Q 020649 60 NWMKKMRRQIHENPEL----------AYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSG-SPPFVALRADMDAL 127 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~-~~~-~~~~ill~~H~Dtv 127 (323)
+++++++++|++||+. +++|.++++||.++|+++|++++.. ...|+++++ +.+ ++|+|+|.||+|||
T Consensus 10 ~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~DtV 88 (412)
T PRK12893 10 ERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDTQ 88 (412)
T ss_pred HHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccCC
Confidence 5678888999999953 4558999999999999999999874 356999999 444 36899999999999
Q ss_pred cCcCCCCCccCCcCCCeEeeCCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC------CcHHHHHhcCcc---
Q 020649 128 PIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG------TGAKDMIQEGVL--- 198 (323)
Q Consensus 128 p~~~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g------~G~~~~~~~~~~--- 198 (323)
|++ |.+|| |++++++|++++.|++.+..++++|.|+|++|||.| .|+..+......
T Consensus 89 p~~------------g~~dg---k~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~ 153 (412)
T PRK12893 89 PTG------------GRFDG---ALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDA 153 (412)
T ss_pred CCC------------Ccccc---hhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHHH
Confidence 964 44566 689999999999999988888999999999999985 277766643210
Q ss_pred ----------------------------CCccEEEEEeccCCC---CceeEEeeeccccceeeEEEEEEEecCCccCC-C
Q 020649 199 ----------------------------ENVEAIFGLHLVHKY---PTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-P 246 (323)
Q Consensus 199 ----------------------------~~~d~~~~~~~~~~~---~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~-p 246 (323)
.+.|+.+.+|.+++. +.+. .......++|..+++|+++|+++|++. |
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~G~~aHas~~p 232 (412)
T PRK12893 154 LARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEVTVEGQAAHAGTTP 232 (412)
T ss_pred HhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEEEEEEECCCcCCCc
Confidence 012334444432220 0000 011123457999999999999999985 8
Q ss_pred C-CCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 247 Q-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 247 ~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg-~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
+ .|.||+..+++++..|+++..+.. ...+++++.++|| ...|+||++|++++|+|++|+++.+++.++|++++
T Consensus 233 ~~~G~NAI~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~ 307 (412)
T PRK12893 233 MAMRRDALVAAARIILAVERIAAALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAAC 307 (412)
T ss_pred chhccCHHHHHHHHHHHHHHHHHhcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 4 799999999999999998754321 1468999999984 79999999999999999999999999999999876
No 52
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.7e-33 Score=269.05 Aligned_cols=243 Identities=16% Similarity=0.158 Sum_probs=186.9
Q ss_pred HHHHHHHHHHhcCCC---------CCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECC-CCCCeeEEEeccCcccC
Q 020649 60 NWMKKMRRQIHENPE---------LAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGS-GSPPFVALRADMDALPI 129 (323)
Q Consensus 60 ~~l~~l~~~l~~ips---------~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~-~~~~~ill~~H~Dtvp~ 129 (323)
+++++++.+++++++ .+++|.++++||.++|+++|++++.. ..+|+++++++ +++|+|+|+||+||||+
T Consensus 10 ~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nl~a~~~g~~~~~~l~l~gH~DtVp~ 88 (412)
T PRK12892 10 QRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRID-GIGNVFGRLPGPGPGPALLVGSHLDSQNL 88 (412)
T ss_pred HHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCeEEEEccccCCCC
Confidence 456666777777655 56778999999999999999999875 46799999943 44589999999999997
Q ss_pred cCCCCCccCCcCCCeEeeCCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC------CcHHHHHhcCcc-----
Q 020649 130 QELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG------TGAKDMIQEGVL----- 198 (323)
Q Consensus 130 ~~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g------~G~~~~~~~~~~----- 198 (323)
+ |++|| +++++++|++++.|++.+..++++|.|++++|||.+ .|++.++.+...
T Consensus 89 ~------------g~~dg---~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~ 153 (412)
T PRK12892 89 G------------GRYDG---ALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALA 153 (412)
T ss_pred C------------Ccccc---hHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHh
Confidence 4 45677 468999999999999998889999999999999984 388888742100
Q ss_pred -----C-------------CccEEEEE-----------eccCC---CCceeEEeeeccccceeeEEEEEEEecCCccCC-
Q 020649 199 -----E-------------NVEAIFGL-----------HLVHK---YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI- 245 (323)
Q Consensus 199 -----~-------------~~d~~~~~-----------~~~~~---~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~- 245 (323)
+ ..|+++.. |.+.+ ++.+. .......++|..+++|+++|+++|++.
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~-~~~i~~~~kG~~~~~i~v~G~~aHa~~~ 232 (412)
T PRK12892 154 ARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGL-PVGVVTGIVGIWQYRITVTGEAGHAGTT 232 (412)
T ss_pred CccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCC-cEEEEEEeccceEEEEEEEEECCCCCCC
Confidence 0 01222221 21111 01110 011123456999999999999999984
Q ss_pred CC-CCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 246 PQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 246 p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg-~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
|+ .|.||+..+++++..|+++..+.. .+.++|+|.|+|| ...|+||++|++++|+|++|+++.+++.++|++++
T Consensus 233 p~~~g~nAi~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~ 308 (412)
T PRK12892 233 PMALRRDAGLAAAEMIAAIDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALC 308 (412)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 75 678999999999999988653322 2468999999986 79999999999999999999999999999999875
No 53
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-33 Score=254.42 Aligned_cols=259 Identities=22% Similarity=0.272 Sum_probs=204.4
Q ss_pred HHHHHHHHHHhcCCCCCccc--H-HHHHHHHHHHHHcCCcEEec---cCCceEEEEE-CCCC-CCeeEEEeccCcccCcC
Q 020649 60 NWMKKMRRQIHENPELAYEE--F-ETSELIRRELDQLGIAYRWP---VAKTGVVATV-GSGS-PPFVALRADMDALPIQE 131 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e--~-~~~~~l~~~l~~~G~~~~~~---~~~~nvia~~-~~~~-~~~ill~~H~Dtvp~~~ 131 (323)
...+..+++..+||+.-.+- . ..++|+.++.+.+|+.++.. .+.++++.+| |+.+ -+.|+|++|+||||+..
T Consensus 25 ~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~ 104 (420)
T KOG2275|consen 25 NISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFR 104 (420)
T ss_pred chHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCc
Confidence 33566677777788764432 3 78999999999999987543 3567788888 6664 58999999999999855
Q ss_pred CCCCccCC-----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC--CcHHHHHhcCccCCc
Q 020649 132 LVEWEHKS-----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG--TGAKDMIQEGVLENV 201 (323)
Q Consensus 132 ~~~w~~~p-----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g--~G~~~~~~~~~~~~~ 201 (323)
+ .|.++| .++|.|||||+ |+-+++.|.|++.|+..+.+++++|.+.|.+|||.| .|++.+.+...+.+.
T Consensus 105 e-~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l 183 (420)
T KOG2275|consen 105 E-KWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKL 183 (420)
T ss_pred c-cCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhccc
Confidence 4 899998 46899999999 899999999999999999999999999999999988 499999884445555
Q ss_pred cEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhccc---------cC
Q 020649 202 EAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE---------ID 272 (323)
Q Consensus 202 d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~---------~~ 272 (323)
...++++. ++...+.+ .+.+..++|..|++|++.|.++|+|.|.. ..|+.++.++|.++.+...+. ..
T Consensus 184 ~~~filDE-G~~se~d~-~~vfyaEkg~w~~~v~~~G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~ 260 (420)
T KOG2275|consen 184 NLGFILDE-GGATENDF-ATVFYAEKGPWWLKVTANGTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQVDLLASGPKLA 260 (420)
T ss_pred ceeEEecC-CCCCcccc-eeEEEEeeceeEEEEEecCCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHHHHhhcCCcee
Confidence 56666653 32222222 34456678999999999999999997322 367788888888877654221 12
Q ss_pred CCCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHH-HHHh
Q 020649 273 PLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERI-EEVL 322 (323)
Q Consensus 273 ~~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i-~~~i 322 (323)
....+|+|++.++||.+.|++|+++++.+|+|+.|..+.+++.+++ ++.+
T Consensus 261 ~~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~ 311 (420)
T KOG2275|consen 261 LGDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWA 311 (420)
T ss_pred ccceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhh
Confidence 2356899999999999999999999999999999999999999998 5543
No 54
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.3e-33 Score=267.14 Aligned_cols=241 Identities=17% Similarity=0.248 Sum_probs=187.1
Q ss_pred HHHHHHHHHHhcC----------CCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECC-C-CCCeeEEEeccCcc
Q 020649 60 NWMKKMRRQIHEN----------PELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGS-G-SPPFVALRADMDAL 127 (323)
Q Consensus 60 ~~l~~l~~~l~~i----------ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~-~-~~~~ill~~H~Dtv 127 (323)
+.++++++++++| ||.|++|.++++||.++|+++|++++.. ...|++|++++ + ++|+|+|+||||||
T Consensus 7 ~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~DtV 85 (413)
T PRK09290 7 ERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDTV 85 (413)
T ss_pred HHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccCC
Confidence 5566667777766 3778889999999999999999999875 46799999954 3 35899999999999
Q ss_pred cCcCCCCCccCCcCCCeEeeCCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC------CcHHHHHhc------
Q 020649 128 PIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG------TGAKDMIQE------ 195 (323)
Q Consensus 128 p~~~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g------~G~~~~~~~------ 195 (323)
|++ |.++| |+++|++++|+++|++.+..++++|.|++++|||.| .|++.+++.
T Consensus 86 p~~------------g~~d~---k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~ 150 (413)
T PRK09290 86 PNG------------GRFDG---PLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDA 150 (413)
T ss_pred CCC------------CCcCC---HHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHH
Confidence 974 22333 789999999999999988888899999999999984 377766532
Q ss_pred ------------------CccCCccEEEEEeccCC----------------CCceeEEeeeccccceeeEEEEEEEecCC
Q 020649 196 ------------------GVLENVEAIFGLHLVHK----------------YPTGVVASRPGDFLAGCGSFKAKISGKGG 241 (323)
Q Consensus 196 ------------------~~~~~~d~~~~~~~~~~----------------~~~~~~~~~~g~~~~G~~~~~i~v~G~~~ 241 (323)
++ +.|++++...+|+ +|.+. .......++|..+++|+++|+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~--~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~-~~~i~~~~kG~~~~~i~v~Gk~a 227 (413)
T PRK09290 151 LALRDADGVSFAEALAAIGY--DGDEAVGAARARRDIKAFVELHIEQGPVLEAEGL-PIGVVTGIVGQRRYRVTFTGEAN 227 (413)
T ss_pred HhccCCCCCCHHHHHHHcCC--ChhhccccccCCCCccEEEEEEeccCHHHHHCCC-cEEEEeeeeccEEEEEEEEEECC
Confidence 21 2344443211121 11111 01112345699999999999999
Q ss_pred ccC-CC-CCCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcC-CcCccccceEEEEEEEeccChhhHHHHHHHH
Q 020649 242 HAA-IP-QHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERI 318 (323)
Q Consensus 242 Hs~-~p-~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg-~~~nviP~~a~~~~diR~~~~~~~~~~~~~i 318 (323)
|++ .| +.|.|||..+++++..|+++..+.. .+.+++++.+++| ...|+||++|++++|+|++|+++.+++.++|
T Consensus 228 Has~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i 304 (413)
T PRK09290 228 HAGTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAEL 304 (413)
T ss_pred CCCCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHH
Confidence 998 68 5789999999999999988653321 2458999999975 7999999999999999999999999999999
Q ss_pred HHHh
Q 020649 319 EEVL 322 (323)
Q Consensus 319 ~~~i 322 (323)
++++
T Consensus 305 ~~~~ 308 (413)
T PRK09290 305 RAAA 308 (413)
T ss_pred HHHH
Confidence 8875
No 55
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=8.4e-33 Score=268.71 Aligned_cols=244 Identities=19% Similarity=0.231 Sum_probs=191.5
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEEC-C-C--CCCeeEEEeccCcccCcCC---
Q 020649 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVG-S-G--SPPFVALRADMDALPIQEL--- 132 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~-~-~--~~~~ill~~H~Dtvp~~~~--- 132 (323)
+++++++++++++|+++++|.++++|+.++|+++|++++.++ .+|+++++. . + +.|+|+|.|||||||++..
T Consensus 4 ~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~ 82 (477)
T TIGR01893 4 SRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQDE-VGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSL 82 (477)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEeC-CCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCC
Confidence 567888999999999999999999999999999999988764 579999983 2 1 3589999999999998653
Q ss_pred CCCccCC----cCCCeEeeCCc------cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCc
Q 020649 133 VEWEHKS----KIDGKMHACGH------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENV 201 (323)
Q Consensus 133 ~~w~~~p----~~~g~l~g~G~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~ 201 (323)
..|.++| ++||++||||+ |++++++|++++. .+ .++++|.++|++|||.| .|++.+..+.. ..
T Consensus 83 ~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~ 156 (477)
T TIGR01893 83 HDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--SG 156 (477)
T ss_pred CCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--CC
Confidence 3687776 57999999996 6888888887664 22 35679999999999988 59998876533 23
Q ss_pred cEEEEEeccCCCCceeEEeeec-------------cccceeeEEEEEEEe-cCCccC-CCCCCC-CHHHHHHHHHHHHHH
Q 020649 202 EAIFGLHLVHKYPTGVVASRPG-------------DFLAGCGSFKAKISG-KGGHAA-IPQHCI-DPILAVSSSVISLQN 265 (323)
Q Consensus 202 d~~~~~~~~~~~~~~~~~~~~g-------------~~~~G~~~~~i~v~G-~~~Hs~-~p~~g~-NAi~~~~~~i~~l~~ 265 (323)
++++..+. ..+...+...++ ...+|..+++|+++| +++||| .|+.++ ||+..++++|..+++
T Consensus 157 ~~~~~~d~--~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~ 234 (477)
T TIGR01893 157 KILINIDS--EEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKE 234 (477)
T ss_pred cEEEEecC--CCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhh
Confidence 55554431 111011100001 013688999999999 999998 588885 999999999999887
Q ss_pred hhccccCCCCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 266 IVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 266 ~~~~~~~~~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
.. ..+++.+.||.+.|+||++|++++|+|.......+.+.+++.+.+
T Consensus 235 ~~----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~ 281 (477)
T TIGR01893 235 NL----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKF 281 (477)
T ss_pred cC----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHH
Confidence 52 267889999999999999999999999998888888887776653
No 56
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-33 Score=250.14 Aligned_cols=266 Identities=20% Similarity=0.262 Sum_probs=208.0
Q ss_pred HHHHhcchhhHHHHHHHHHHHhcCCCCCccc------HHHHHHHHHHHHHcCCcEEecc-------------CCceEEEE
Q 020649 49 IIELANDQDTVNWMKKMRRQIHENPELAYEE------FETSELIRRELDQLGIAYRWPV-------------AKTGVVAT 109 (323)
Q Consensus 49 i~~~~~~~~~~~~l~~l~~~l~~ips~s~~e------~~~~~~l~~~l~~~G~~~~~~~-------------~~~nvia~ 109 (323)
+++.++ ..++++++.+++.++|+|+|... .++++|++++|+++|-+++..+ .++.++++
T Consensus 7 ~fq~id--~~~de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl~~ 84 (473)
T KOG2276|consen 7 VFQSID--LNKDEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVLGV 84 (473)
T ss_pred HHHHhh--ccHHHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhhhc
Confidence 344443 36789999999999999998754 6899999999999997766432 24557888
Q ss_pred ECCC-CCCeeEEEeccCcccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEc
Q 020649 110 VGSG-SPPFVALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQP 181 (323)
Q Consensus 110 ~~~~-~~~~ill~~H~Dtvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 181 (323)
+|+. +++++++|||||++|++.+++|.++| ++||+|||||+ ||++++++.+++++++.+++++.||+|+|.+
T Consensus 85 ~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~~Eg 164 (473)
T KOG2276|consen 85 LGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFVFEG 164 (473)
T ss_pred ccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEEEEe
Confidence 8776 47899999999999999999999999 68999999998 8999999999999999999999999999999
Q ss_pred CCCCCC-cHHHHHh---cCccCCccEEEEEec---cCCCCceeEEeeeccccceeeEEEEEEEe--cCCccCC-CCCCCC
Q 020649 182 AEERGT-GAKDMIQ---EGVLENVEAIFGLHL---VHKYPTGVVASRPGDFLAGCGSFKAKISG--KGGHAAI-PQHCID 251 (323)
Q Consensus 182 ~EE~g~-G~~~~~~---~~~~~~~d~~~~~~~---~~~~~~~~~~~~~g~~~~G~~~~~i~v~G--~~~Hs~~-p~~g~N 251 (323)
.||.|+ |...+++ +.++.++|+++..++ +...|+.+++.| |.+.+.|+|+| +-.|||. ...-.-
T Consensus 165 mEEsgS~~L~~l~~~~kD~~~~~vD~vciSdnyWlg~kkPcltyGlR------G~~yf~i~v~g~~~DlHSGvfGG~~hE 238 (473)
T KOG2276|consen 165 MEESGSEGLDELIEKEKDKFFKDVDFVCISDNYWLGTKKPCLTYGLR------GVIYFQIEVEGPSKDLHSGVFGGVVHE 238 (473)
T ss_pred chhccCccHHHHHHHHhhhhhccCCEEEeeCceeccCCCcccccccc------cceeEEEEEeecccccccccccchhHH
Confidence 999996 7766664 456778999886543 334566666666 99999999999 6679984 333335
Q ss_pred HHHHHHHHHHHHHHhhccc----------------------cC---------------C-----------CCCceEEE--
Q 020649 252 PILAVSSSVISLQNIVSRE----------------------ID---------------P-----------LDSQVVSV-- 281 (323)
Q Consensus 252 Ai~~~~~~i~~l~~~~~~~----------------------~~---------------~-----------~~~~~~~i-- 281 (323)
|+..|..++..|.+...+- .+ + =.++++++
T Consensus 239 ~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihg 318 (473)
T KOG2276|consen 239 AMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHG 318 (473)
T ss_pred HHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceec
Confidence 5555566665554332110 00 0 01234555
Q ss_pred --EEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 282 --AMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 282 --~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
|.+.|.++.+|||.++...|.+|++|.++++.+.+.+.+++
T Consensus 319 IeGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl 361 (473)
T KOG2276|consen 319 IEGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYL 361 (473)
T ss_pred ccceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHH
Confidence 44557789999999999999999999999999998888765
No 57
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=4.8e-32 Score=259.09 Aligned_cols=227 Identities=19% Similarity=0.211 Sum_probs=179.1
Q ss_pred CCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEE-CCC-CCCeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCccH
Q 020649 75 LAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDA 152 (323)
Q Consensus 75 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~-~~~-~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k~ 152 (323)
-+..|.++++||.++|+++|++++.+ ..+|+++++ +.+ ++|+|+|+|||||||.+. . .+.|+
T Consensus 35 ~~~~e~~~~~~l~~~l~~~G~~v~~~-~~gNl~a~~~g~~~~~~~l~~~~H~DtVp~gg------------~---~D~k~ 98 (414)
T PRK12891 35 LTDGDREARDLFVAWARDAGCTVRVD-AMGNLFARRAGRDPDAAPVMTGSHADSQPTGG------------R---YDGIY 98 (414)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEC-CCCCEEEEecCCCCCCCeEEEEecccCCCCCc------------c---ccchh
Confidence 35578999999999999999999876 467999999 433 358999999999999742 2 23499
Q ss_pred HHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC------cHHHH------------------------HhcCccC---
Q 020649 153 HVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT------GAKDM------------------------IQEGVLE--- 199 (323)
Q Consensus 153 ~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~------G~~~~------------------------~~~~~~~--- 199 (323)
+++++|++++.|++.+.+++++|.|++++|||.|. |+..+ .+.|+..
T Consensus 99 Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 178 (414)
T PRK12891 99 GVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIGYAGAEP 178 (414)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCCCCcccc
Confidence 99999999999999999999999999999999852 66533 3334311
Q ss_pred ----CccEEEEEeccCC---CCce-eEEeeeccccceeeEEEEEEEecCCccC-CCC-CCCCHHHHHHHHHHHHHHhhcc
Q 020649 200 ----NVEAIFGLHLVHK---YPTG-VVASRPGDFLAGCGSFKAKISGKGGHAA-IPQ-HCIDPILAVSSSVISLQNIVSR 269 (323)
Q Consensus 200 ----~~d~~~~~~~~~~---~~~~-~~~~~~g~~~~G~~~~~i~v~G~~~Hs~-~p~-~g~NAi~~~~~~i~~l~~~~~~ 269 (323)
+.++.+.+|.+++ ++.+ .+. ....++|..+++|+++|+++|+| .|+ .|.||+..++++|..|+++..+
T Consensus 179 ~~~~~~~~~~e~h~e~g~vle~~~~~~~--iv~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~ 256 (414)
T PRK12891 179 VGGYPVHAAYELHIEQGAILERAGKTIG--VVTAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFLDALGRR 256 (414)
T ss_pred cccCCCCEEEEEEeCCCHHHHHCCCcEE--EEeeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHHHHHHHh
Confidence 1235555665543 1111 111 12335699999999999999998 686 5899999999999999887543
Q ss_pred ccCCCCCceEEEEEEEcC-CcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 270 EIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 270 ~~~~~~~~~~~i~~i~gg-~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
. ..+.++|+|.|+|| .+.|+||++|++++|+|++|.++.+++.++|++++
T Consensus 257 ~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~ 307 (414)
T PRK12891 257 D---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAEL 307 (414)
T ss_pred c---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 1 12469999999997 69999999999999999999999999999998875
No 58
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=4.8e-32 Score=259.20 Aligned_cols=230 Identities=17% Similarity=0.204 Sum_probs=176.6
Q ss_pred cCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECC--CCCCeeEEEeccCcccCcCCCCCccCCcCCCeEeeC
Q 020649 71 ENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGS--GSPPFVALRADMDALPIQELVEWEHKSKIDGKMHAC 148 (323)
Q Consensus 71 ~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~--~~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~ 148 (323)
.+||.+++|.++++||.++|+++|++++.. ...|++|++++ +++|+|+|+|||||||++ |..+
T Consensus 29 ~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp~~------------g~~D-- 93 (414)
T PRK12890 29 TRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVPNG------------GRYD-- 93 (414)
T ss_pred eeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCCCC------------CCcC--
Confidence 444778899999999999999999999875 46799999943 246899999999999974 3333
Q ss_pred CccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC------CcHHHHHhc------------------------Ccc
Q 020649 149 GHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG------TGAKDMIQE------------------------GVL 198 (323)
Q Consensus 149 G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g------~G~~~~~~~------------------------~~~ 198 (323)
.|++++++|++++.|++.+..++++|.|++++|||.| .|++.+... ++
T Consensus 94 -~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 171 (414)
T PRK12890 94 -GILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIGG- 171 (414)
T ss_pred -CHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcCC-
Confidence 3889999999999999888888999999999999974 266555432 11
Q ss_pred CCccEEE-------------EEeccCCC---CceeEEeeeccccceeeEEEEEEEecCCccCC-CCC-CCCHHHHHHHHH
Q 020649 199 ENVEAIF-------------GLHLVHKY---PTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-PQH-CIDPILAVSSSV 260 (323)
Q Consensus 199 ~~~d~~~-------------~~~~~~~~---~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~-p~~-g~NAi~~~~~~i 260 (323)
..|++. .+|.+.+. +.+. .......++|..+++|+++|+++|++. |+. +.||+..+++++
T Consensus 172 -~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~i 249 (414)
T PRK12890 172 -DPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAELV 249 (414)
T ss_pred -ChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHHHH
Confidence 122222 22222110 0000 001123456999999999999999985 854 589999999999
Q ss_pred HHHHHhhccccCCCCCceEEEEEEEc-CCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 261 ISLQNIVSREIDPLDSQVVSVAMING-GSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 261 ~~l~~~~~~~~~~~~~~~~~i~~i~g-g~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
..|+++..+.. .+.+++++.+++ |.+.|+||++|++++|+|++|+++.+++.++|++++
T Consensus 250 ~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~ 309 (414)
T PRK12890 250 TAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAEL 309 (414)
T ss_pred HHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 99998754322 356889999997 479999999999999999999999999999998765
No 59
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=99.98 E-value=2e-30 Score=246.97 Aligned_cols=229 Identities=18% Similarity=0.273 Sum_probs=177.7
Q ss_pred CCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEEC-CCC-CCeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCcc
Q 020649 74 ELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVG-SGS-PPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHD 151 (323)
Q Consensus 74 s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~-~~~-~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k 151 (323)
+.+++|.++++||+++|+++|++++.+. ..||+|+++ .++ +|.|+|+||+||||.+ |++|| +
T Consensus 25 ~~~~~e~~~~~~l~~~~~~~G~~~~~~~-~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg---~ 88 (401)
T TIGR01879 25 ALSPEDREAQDLFKKRMRAAGLEVRFDE-VGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDG---Q 88 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEec-CCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCC---H
Confidence 4467899999999999999999998754 579999994 343 5899999999999964 56666 4
Q ss_pred HHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCC-----C-CcHHHHHhcCc-------c--------------------
Q 020649 152 AHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER-----G-TGAKDMIQEGV-------L-------------------- 198 (323)
Q Consensus 152 ~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-----g-~G~~~~~~~~~-------~-------------------- 198 (323)
.+++++|++++.|++.+.+++++|.|++++|||. + .|++.++.... .
T Consensus 89 ~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 168 (401)
T TIGR01879 89 LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPN 168 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccc
Confidence 5899999999999999999999999999999997 3 37777754210 0
Q ss_pred ------CCccEEEEEeccCCC---CceeEEeeeccccceeeEEEEEEEecCCccCC-CC-CCCCHHHHHHHHHHHHHHhh
Q 020649 199 ------ENVEAIFGLHLVHKY---PTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-PQ-HCIDPILAVSSSVISLQNIV 267 (323)
Q Consensus 199 ------~~~d~~~~~~~~~~~---~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~-p~-~g~NAi~~~~~~i~~l~~~~ 267 (323)
.+.++.+-+|.+.+. +.|. .......++|..|++|+++|+++|++. |+ .++||+..+++++..|+++.
T Consensus 169 ~~~~~~~~~~~~~e~Hieqg~~l~~~g~-~~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~ 247 (401)
T TIGR01879 169 QPLRPRGDIKAYVELHIEQGPVLESNGQ-PIGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKA 247 (401)
T ss_pred ccccccccccEEEEEEEcCCcChhhCCC-eEEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 011233444443321 0111 011123456999999999999999985 64 57899999999999999875
Q ss_pred ccccCCCCCceEEEEEEEcC-CcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 268 SREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 268 ~~~~~~~~~~~~~i~~i~gg-~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
.+.. .+.+.+++.+++| ...|+||++|++.+|+|+.|+++.+++.++|++++
T Consensus 248 ~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~ 300 (401)
T TIGR01879 248 KRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDI 300 (401)
T ss_pred HhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 4321 2357899999985 67999999999999999999999999999998876
No 60
>PRK08554 peptidase; Reviewed
Probab=99.97 E-value=8.5e-30 Score=244.70 Aligned_cols=254 Identities=19% Similarity=0.206 Sum_probs=176.2
Q ss_pred HHHHHHHHhcCCCCCcc------cHHHHHHHHHHHHHcCCcEEecc--CCceEEEEECCCCCCeeEEEeccCcccCcCCC
Q 020649 62 MKKMRRQIHENPELAYE------EFETSELIRRELDQLGIAYRWPV--AKTGVVATVGSGSPPFVALRADMDALPIQELV 133 (323)
Q Consensus 62 l~~l~~~l~~ips~s~~------e~~~~~~l~~~l~~~G~~~~~~~--~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~ 133 (323)
+++++++|++|||.+.. +.++++|+.++|+++|++++..+ ...|+++.++.+ .++|+|+||+||||+++ +
T Consensus 3 ~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~-~ 80 (438)
T PRK08554 3 VLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNP-E 80 (438)
T ss_pred HHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCc-c
Confidence 57788999999997643 47899999999999999986443 357899998543 47899999999999865 3
Q ss_pred CCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC-cHHHHHhcCc--cCCccE
Q 020649 134 EWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGV--LENVEA 203 (323)
Q Consensus 134 ~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~--~~~~d~ 203 (323)
.|.++| ++||++||||+ |++++++|+|++.|++.+ ++++|.|+|++|||.|+ ++..+++... ....|+
T Consensus 81 ~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~--~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~~ 158 (438)
T PRK08554 81 EWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKEP--LNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPKY 158 (438)
T ss_pred ccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEcccccCccccHHHHHHHHhcCCCCCE
Confidence 587766 57899999997 899999999999998743 67899999999999985 4556554311 124688
Q ss_pred EEEEeccCCCCceeEEeeeccc-----------ccee---eEEEEEEEecC-CccCCCCCCCC--HHHHHHHHHHHHHHh
Q 020649 204 IFGLHLVHKYPTGVVASRPGDF-----------LAGC---GSFKAKISGKG-GHAAIPQHCID--PILAVSSSVISLQNI 266 (323)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~g~~-----------~~G~---~~~~i~v~G~~-~Hs~~p~~g~N--Ai~~~~~~i~~l~~~ 266 (323)
+++.+ |+.....+..+.|.. ..|. .++.+++.|.+ +|++.+..|.| |+..+++++..+...
T Consensus 159 ~iv~E--pt~~~~~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~~ 236 (438)
T PRK08554 159 MINAD--GIGMKPIIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNVL 236 (438)
T ss_pred EEEeC--CCCCcchhhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCce
Confidence 77764 432211222222110 0122 34556666665 99998766665 588888877666543
Q ss_pred hcccc-----C--CCCCceEEEEEEEcCC-----------------------------------cCccc---cceEEEEE
Q 020649 267 VSREI-----D--PLDSQVVSVAMINGGS-----------------------------------SYNMI---PDSATVAG 301 (323)
Q Consensus 267 ~~~~~-----~--~~~~~~~~i~~i~gg~-----------------------------------~~nvi---P~~a~~~~ 301 (323)
..... . +....++++....+|. ..|++ |++|++++
T Consensus 237 ~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~~ 316 (438)
T PRK08554 237 AVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLKL 316 (438)
T ss_pred EEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEEE
Confidence 11000 0 1111233332222333 55666 99999999
Q ss_pred EEeccChhhHHHHHHHHHHHh
Q 020649 302 TFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 302 diR~~~~~~~~~~~~~i~~~i 322 (323)
|+|+.| .+.+++.++|++++
T Consensus 317 DiR~~~-~~~e~v~~~i~~~~ 336 (438)
T PRK08554 317 DIRAMS-YSKEDIERTLKEVL 336 (438)
T ss_pred EEEecC-CCHHHHHHHHHHHh
Confidence 999988 68899999999875
No 61
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=99.97 E-value=7.3e-29 Score=236.22 Aligned_cols=226 Identities=15% Similarity=0.230 Sum_probs=177.5
Q ss_pred CcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEE-CCC-CCCeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCccHH
Q 020649 76 AYEEFETSELIRRELDQLGIAYRWPVAKTGVVATV-GSG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAH 153 (323)
Q Consensus 76 s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~-~~~-~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k~~ 153 (323)
|.++.++++|+.+||+++|++++.+. -+|+++++ |.. +.|+|++.+||||||.+ |+..| ..|
T Consensus 29 s~~~~~a~~~~~~~~~~~Gl~v~~D~-~gN~~~~~~g~~~~~~~i~~gsHlDtv~~g------------G~~dg---~~G 92 (406)
T TIGR03176 29 SPEWLAAQQQFKKRMAESGLETRFDD-VGNLYGRLVGTEFPEETILTGSHIDTVVNG------------GNLDG---QFG 92 (406)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEecCCCCCCCeEEEeccccCCCCC------------CccCc---hhh
Confidence 34568999999999999999988764 67999999 444 35899999999999964 44444 689
Q ss_pred HHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC------CcHHHHHhc------------------------Cc------
Q 020649 154 VAMLLGAAKILQEMRETLKGTVVLIFQPAEERG------TGAKDMIQE------------------------GV------ 197 (323)
Q Consensus 154 ~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g------~G~~~~~~~------------------------~~------ 197 (323)
+++.|++++.|++.+..++++|.++++.+||.+ .|++.+... |+
T Consensus 93 v~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~ 172 (406)
T TIGR03176 93 ALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLRKAP 172 (406)
T ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCccccc
Confidence 999999999999999999999999999999985 266665520 11
Q ss_pred --cCCccEEEEEeccCCCC---cee-EEeeeccccceeeEEEEEEEecCCccCC-CCC-CCCHHHHHHHHHHHHHHhhcc
Q 020649 198 --LENVEAIFGLHLVHKYP---TGV-VASRPGDFLAGCGSFKAKISGKGGHAAI-PQH-CIDPILAVSSSVISLQNIVSR 269 (323)
Q Consensus 198 --~~~~d~~~~~~~~~~~~---~~~-~~~~~g~~~~G~~~~~i~v~G~~~Hs~~-p~~-g~NAi~~~~~~i~~l~~~~~~ 269 (323)
..++++.+-+|.+.+.- .+. ++. ....+|..+++|+++|+++|+|. |+. +.||+..+++++..+.++..+
T Consensus 173 ~~~~~~~~~~elHieqG~~Le~~g~~igi--v~~~~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~l~~~~~~ 250 (406)
T TIGR03176 173 TVRDDIKAFVELHIEQGCVLESEGQSIGV--VNAIVGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQSIERAKE 250 (406)
T ss_pred ccccccceEEEEEECCCcchHHCCCeEEE--EeecccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHh
Confidence 01345677788765421 111 211 12345999999999999999996 443 479999999999999886432
Q ss_pred ccCCCCCceEEEEEEE-cCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 270 EIDPLDSQVVSVAMIN-GGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 270 ~~~~~~~~~~~i~~i~-gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
. ..+.++|+|.|+ +|.+.|+||++|++++|+|.+|.++.+.+.+++++.+
T Consensus 251 ~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i 301 (406)
T TIGR03176 251 I---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDM 301 (406)
T ss_pred c---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHH
Confidence 1 234589999999 5789999999999999999999999998888887765
No 62
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=99.97 E-value=1.4e-28 Score=243.97 Aligned_cols=242 Identities=17% Similarity=0.193 Sum_probs=189.4
Q ss_pred hhhHHHHHHHHHHHhcCCCC-------------CcccHHHHHHHHHHHHHcCC-cEEeccCCceEEEEE-CCCC-CCeeE
Q 020649 56 QDTVNWMKKMRRQIHENPEL-------------AYEEFETSELIRRELDQLGI-AYRWPVAKTGVVATV-GSGS-PPFVA 119 (323)
Q Consensus 56 ~~~~~~l~~l~~~l~~ips~-------------s~~e~~~~~~l~~~l~~~G~-~~~~~~~~~nvia~~-~~~~-~~~il 119 (323)
..+.+++.+.+..+.+|+.+ |..+.++++|+.+||+++|+ +++.+ .-+|+++++ |.++ .|+|+
T Consensus 177 ~~~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D-~~GNl~~~~~g~~~~~~~v~ 255 (591)
T PRK13590 177 PVLGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHID-AVGNVVGRYKGSTPQAKRLL 255 (591)
T ss_pred chHHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeEC-CCCCEEEEecCCCCCCCeEE
Confidence 34667888888888888652 22347899999999999999 88765 468999999 4343 48999
Q ss_pred EEeccCcccCcCCCCCccCCcCCCeEeeCCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC------CcHHH--
Q 020649 120 LRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG------TGAKD-- 191 (323)
Q Consensus 120 l~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g------~G~~~-- 191 (323)
+.+||||||.+ |+++| ++|++++|++++.|++.+..++++|.|+++++||++ .|++.
T Consensus 256 ~gsHlDTV~~g------------G~~DG---~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~ 320 (591)
T PRK13590 256 TGSHYDTVRNG------------GKYDG---RLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALI 320 (591)
T ss_pred EecccccCCCC------------CCccc---HHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHh
Confidence 99999999864 77777 589999999999999999888899999999999973 25554
Q ss_pred ------HHh---------------cCc-----------cCCccEEEEEeccCCC-------CceeEEeeeccccceeeEE
Q 020649 192 ------MIQ---------------EGV-----------LENVEAIFGLHLVHKY-------PTGVVASRPGDFLAGCGSF 232 (323)
Q Consensus 192 ------~~~---------------~~~-----------~~~~d~~~~~~~~~~~-------~~~~~~~~~g~~~~G~~~~ 232 (323)
+++ .|+ .+.+++.+-+|.+++. +.+.+. ..+|..++
T Consensus 321 G~~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~gvV~-----~~~G~~~~ 395 (591)
T PRK13590 321 GDFDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLGIVT-----SINGSVRY 395 (591)
T ss_pred CCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceEEEe-----eeeccEEE
Confidence 222 111 0134566778888762 223332 23599999
Q ss_pred EEEEEecCCccCC-CCC-CCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEc-CCcCccccceEEEEEEEeccChh
Q 020649 233 KAKISGKGGHAAI-PQH-CIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMING-GSSYNMIPDSATVAGTFRAFNKK 309 (323)
Q Consensus 233 ~i~v~G~~~Hs~~-p~~-g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~g-g~~~nviP~~a~~~~diR~~~~~ 309 (323)
+|+++|+++|+|. |+. +.||+..+++++..+++.... ....+.++|.+++ |++.|+||++|++++|+|..+.+
T Consensus 396 ~v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e 471 (591)
T PRK13590 396 VGEMIGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDA 471 (591)
T ss_pred EEEEEeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHH
Confidence 9999999999995 655 679999999999999886432 1234779999984 67999999999999999999999
Q ss_pred hHHHHHHHHHHHh
Q 020649 310 RFNALRERIEEVL 322 (323)
Q Consensus 310 ~~~~~~~~i~~~i 322 (323)
+.+.+.+++++.+
T Consensus 472 ~~e~v~~~i~~~i 484 (591)
T PRK13590 472 QRDAMVADVLAEL 484 (591)
T ss_pred HHHHHHHHHHHHH
Confidence 9999887777664
No 63
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=99.97 E-value=1.9e-28 Score=242.84 Aligned_cols=244 Identities=18% Similarity=0.215 Sum_probs=192.4
Q ss_pred hhhHHHHHHHHHHHhcCCCC-------------CcccHHHHHHHHHHHHHcCCc-EEeccCCceEEEEE-CCC-CCCeeE
Q 020649 56 QDTVNWMKKMRRQIHENPEL-------------AYEEFETSELIRRELDQLGIA-YRWPVAKTGVVATV-GSG-SPPFVA 119 (323)
Q Consensus 56 ~~~~~~l~~l~~~l~~ips~-------------s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~-~~~-~~~~il 119 (323)
....+++.+.+..+.+|+.+ |..+.++++|+.+||+++|++ ++.+. -+||++++ |.+ +.|+|+
T Consensus 177 ~~~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D~-~gNv~~~~~g~~~~~p~v~ 255 (591)
T PRK13799 177 PAIGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEIDA-VGNVVGRYKAADDDAKTLI 255 (591)
T ss_pred hhHHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeECC-CCCEEEEcCCCCCCCCeEE
Confidence 44668888888899988631 223478999999999999998 88764 68999999 443 469999
Q ss_pred EEeccCcccCcCCCCCccCCcCCCeEeeCCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCC-----C-CcHHHHH
Q 020649 120 LRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER-----G-TGAKDMI 193 (323)
Q Consensus 120 l~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-----g-~G~~~~~ 193 (323)
+.+|+||||. +|+++|+ .|+++.|++++.|++.+.+++++|.|++..+||+ + .|++.+.
T Consensus 256 ~gSHlDTV~~------------gG~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~ 320 (591)
T PRK13799 256 TGSHYDTVRN------------GGKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALI 320 (591)
T ss_pred EeccccccCC------------CCccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHh
Confidence 9999999985 3888886 7999999999999999999999999999999998 2 2666654
Q ss_pred --------h----cCc--------------------c--CCccEEEEEeccCC-------CCceeEEeeeccccceeeEE
Q 020649 194 --------Q----EGV--------------------L--ENVEAIFGLHLVHK-------YPTGVVASRPGDFLAGCGSF 232 (323)
Q Consensus 194 --------~----~~~--------------------~--~~~d~~~~~~~~~~-------~~~~~~~~~~g~~~~G~~~~ 232 (323)
+ +|. . .++++.+-+|.+.+ .+.|.+ ...+|..++
T Consensus 321 G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igvV-----~g~~G~~~~ 395 (591)
T PRK13799 321 GDFNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLGIV-----TSIAGSARY 395 (591)
T ss_pred CCChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcEEEE-----eeeccceEE
Confidence 1 121 0 13456677777766 233333 234599999
Q ss_pred EEEEEecCCccCC-CC-CCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEc-CCcCccccceEEEEEEEeccChh
Q 020649 233 KAKISGKGGHAAI-PQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMING-GSSYNMIPDSATVAGTFRAFNKK 309 (323)
Q Consensus 233 ~i~v~G~~~Hs~~-p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~g-g~~~nviP~~a~~~~diR~~~~~ 309 (323)
+|+++|+++|+|. |+ .+.||+..+++++..++++..+. +....++++|.|++ +++.|+||++|++++|+|.++.+
T Consensus 396 ~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e 473 (591)
T PRK13799 396 ICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDE 473 (591)
T ss_pred EEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHH
Confidence 9999999999995 64 57899999999999999875432 22235789999986 35899999999999999999999
Q ss_pred hHHHHHHHHHHHh
Q 020649 310 RFNALRERIEEVL 322 (323)
Q Consensus 310 ~~~~~~~~i~~~i 322 (323)
+.+.+.+++++.+
T Consensus 474 ~~e~l~~~i~~~i 486 (591)
T PRK13799 474 IRDAAVADILAEI 486 (591)
T ss_pred HHHHHHHHHHHHH
Confidence 9998877766654
No 64
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.80 E-value=1.2e-18 Score=159.48 Aligned_cols=260 Identities=15% Similarity=0.145 Sum_probs=175.5
Q ss_pred HHHHHHHHHHhcCCCCCc--ccHHHHHHHHHHHHHcCCcEEe----------cc--CCceEEEEE-CCCCCCeeEEEecc
Q 020649 60 NWMKKMRRQIHENPELAY--EEFETSELIRRELDQLGIAYRW----------PV--AKTGVVATV-GSGSPPFVALRADM 124 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~----------~~--~~~nvia~~-~~~~~~~ill~~H~ 124 (323)
+++.++...+++-||+++ .|...+++|...|+++.+--+. .+ ++.||+|-+ |+.+++||++.||+
T Consensus 8 e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH~ 87 (553)
T COG4187 8 ERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGHF 87 (553)
T ss_pred HHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeecc
Confidence 778888999999999987 4678899999999998763221 12 688999999 54567999999999
Q ss_pred CcccCcCC---CCCccCC----------------------cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEE
Q 020649 125 DALPIQEL---VEWEHKS----------------------KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVV 176 (323)
Q Consensus 125 Dtvp~~~~---~~w~~~p----------------------~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~ 176 (323)
|||.+.+- ....++| ..+++++|||+ |+|+|+.|++++.+.+. ....+||.
T Consensus 88 DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~GNlL 166 (553)
T COG4187 88 DTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQGNLL 166 (553)
T ss_pred ceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCCcEE
Confidence 99987543 2334554 24689999998 89999999999999887 57899999
Q ss_pred EEeEcCCCCC-CcHHHHHhc--Ccc--CCccEEEEEeccCCCCce--eEEeeeccccceeeEEEEEEEecCCccCCCCCC
Q 020649 177 LIFQPAEERG-TGAKDMIQE--GVL--ENVEAIFGLHLVHKYPTG--VVASRPGDFLAGCGSFKAKISGKGGHAAIPQHC 249 (323)
Q Consensus 177 ~~~~~~EE~g-~G~~~~~~~--~~~--~~~d~~~~~~~~~~~~~~--~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~p~~g 249 (323)
|+.++|||.- +|++..+.. +.. .++++..++..+...+.+ .-+.-...++.|..---.-|.|+..|.|.|..|
T Consensus 167 f~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG~~f~G 246 (553)
T COG4187 167 FMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVGYPFEG 246 (553)
T ss_pred EEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEeeccccCCcccC
Confidence 9999999987 587766542 111 134554444444432221 111111122336666667889999999999999
Q ss_pred CCHHHHHHHHHHHHHH---hhccccCCCCCceEEEEEEEcCCcCcc-ccceEEEEEEEeccChhhHHHHHHHHHHH
Q 020649 250 IDPILAVSSSVISLQN---IVSREIDPLDSQVVSVAMINGGSSYNM-IPDSATVAGTFRAFNKKRFNALRERIEEV 321 (323)
Q Consensus 250 ~NAi~~~~~~i~~l~~---~~~~~~~~~~~~~~~i~~i~gg~~~nv-iP~~a~~~~diR~~~~~~~~~~~~~i~~~ 321 (323)
+||...++.++.+|+- +..+......++-.+.-.-.=-++.|| .|.++.+.|++=+. ..+.+++.+++++.
T Consensus 247 vnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~L~qkDlKe~Y~VqTp~~a~~~fN~l~h-~~ta~~~~d~l~~~ 321 (553)
T COG4187 247 VNANFMASEITRRLELNADLADRVDGEITPPPSCLEQKDLKESYNVQTPERAWLYFNWLYH-SRTAKELFDRLKEE 321 (553)
T ss_pred CCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHhhhhhhhhhhccccCcchhhhhheehhh-cCCHHHHHHHHHHH
Confidence 9999999999999864 333322221111111100001123343 47888888887554 35555555555443
No 65
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.74 E-value=1.9e-17 Score=129.10 Aligned_cols=98 Identities=23% Similarity=0.345 Sum_probs=89.1
Q ss_pred cceeeEEEEEEEecCCccCCCCCCCCHHHHHHHHHHHHHHhhcccc-----CCCCCceEEEEEEEcCCcCccccceEEEE
Q 020649 226 LAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI-----DPLDSQVVSVAMINGGSSYNMIPDSATVA 300 (323)
Q Consensus 226 ~~G~~~~~i~v~G~~~Hs~~p~~g~NAi~~~~~~i~~l~~~~~~~~-----~~~~~~~~~i~~i~gg~~~nviP~~a~~~ 300 (323)
++|..+++|+++|+++|+|.|+.|+||+..+++++..|++...+.. ......+++++.++||...|+||++|+++
T Consensus 3 ~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~~ 82 (111)
T PF07687_consen 3 HRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATLT 82 (111)
T ss_dssp EEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEEE
T ss_pred CCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEEE
Confidence 4599999999999999999999999999999999999998854432 45567899999999999999999999999
Q ss_pred EEEeccChhhHHHHHHHHHHHhC
Q 020649 301 GTFRAFNKKRFNALRERIEEVLI 323 (323)
Q Consensus 301 ~diR~~~~~~~~~~~~~i~~~i~ 323 (323)
+|+|++|.++.++++++|+++++
T Consensus 83 ~~~R~~p~~~~~~i~~~i~~~~~ 105 (111)
T PF07687_consen 83 VDIRYPPGEDLEEIKAEIEAAVE 105 (111)
T ss_dssp EEEEESTCHHHHHHHHHHHHHHH
T ss_pred EEEECCCcchHHHHHHHHHHHHH
Confidence 99999999999999999998863
No 66
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.71 E-value=3.7e-16 Score=143.29 Aligned_cols=131 Identities=16% Similarity=0.258 Sum_probs=101.8
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEecc-------------------CCceEEEEECCCCCCeeEE
Q 020649 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------------------AKTGVVATVGSGSPPFVAL 120 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------------------~~~nvia~~~~~~~~~ill 120 (323)
+++..+...+-..+..+..|.++++||+++|+++|++++.+. .+.||+|.+.+...+.|++
T Consensus 35 ~~~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill 114 (346)
T PRK10199 35 TQARHIATFFPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIII 114 (346)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEE
Confidence 344555556666777788899999999999999999875321 1357999995444688999
Q ss_pred EeccCcccCcCCCCCccCCcCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhc
Q 020649 121 RADMDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQE 195 (323)
Q Consensus 121 ~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~ 195 (323)
.||||||++.....|++.. +-++++|+ |+|++++|++++.|++.+ ++.+|.|+++++||.| .|+++++++
T Consensus 115 ~AH~DTV~p~~~~~~~~~~---~g~~~~GA~DnasGvA~lLe~ar~l~~~~--~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 115 MAHLDTYAPQSDADVDANL---GGLTLQGMDDNAAGLGVMLELAERLKNVP--TEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred EEEcCcCCCCCCCccccCC---CCcccCCccccHHHHHHHHHHHHHHhhCC--CCCcEEEEEECCcccCcHHHHHHHHh
Confidence 9999999754333444432 22778888 699999999999998653 6789999999999999 599999986
No 67
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.63 E-value=8.1e-16 Score=131.02 Aligned_cols=76 Identities=37% Similarity=0.687 Sum_probs=68.9
Q ss_pred EEEeccCcccCcCCCCCccCC----cCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC--cH
Q 020649 119 ALRADMDALPIQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GA 189 (323)
Q Consensus 119 ll~~H~Dtvp~~~~~~w~~~p----~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~ 189 (323)
+|++|||||| . .++|.++| +++|++||||+ |+++++++.+++.+++.+.+++++|.|+|+++||.|+ |+
T Consensus 1 ll~~H~Dtv~-~-~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVP-G-PEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCS-T-GGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccC-C-cCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 6899999999 5 77898887 67999999998 7999999999999998889999999999999999995 99
Q ss_pred HHHHhcC
Q 020649 190 KDMIQEG 196 (323)
Q Consensus 190 ~~~~~~~ 196 (323)
+.+++++
T Consensus 79 ~~l~~~~ 85 (189)
T PF01546_consen 79 KHLLEEG 85 (189)
T ss_dssp HHHHHHC
T ss_pred hhhhhhc
Confidence 9999874
No 68
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.53 E-value=4.4e-14 Score=132.79 Aligned_cols=250 Identities=18% Similarity=0.196 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEE-ecc-------C--Cce-EEEEECCC--CCCeeEEEeccC
Q 020649 59 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYR-WPV-------A--KTG-VVATVGSG--SPPFVALRADMD 125 (323)
Q Consensus 59 ~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~-~~~-------~--~~n-via~~~~~--~~~~ill~~H~D 125 (323)
.+++++.+.++++||+.|.+|.+++.++.+|++.+|+.++ ... . ..| +.+.+.+. .-|++.|.+|+|
T Consensus 4 ~~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~D 83 (414)
T COG2195 4 MERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHD 83 (414)
T ss_pred hHHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeecccccccccccccccc
Confidence 3678889999999999999999999999999999999983 111 1 122 45555332 348899999999
Q ss_pred cccCcC----CCCC---------------------ccCCc------------CCCeEeeCCccHHHHHHHHHHHHHHHcc
Q 020649 126 ALPIQE----LVEW---------------------EHKSK------------IDGKMHACGHDAHVAMLLGAAKILQEMR 168 (323)
Q Consensus 126 tvp~~~----~~~w---------------------~~~p~------------~~g~l~g~G~k~~~a~~l~a~~~l~~~~ 168 (323)
|+|... ..+| .+.|. ++.-|-|-++|+|++.++.++..+++..
T Consensus 84 t~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~ 163 (414)
T COG2195 84 TVPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKH 163 (414)
T ss_pred ccccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcC
Confidence 996211 0112 12231 1112234444799999999999999653
Q ss_pred -CCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEeccCCCCceeEEeeeccccceeeEEEEEEEecCCccCC-
Q 020649 169 -ETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI- 245 (323)
Q Consensus 169 -~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~~~~G~~~~~i~v~G~~~Hs~~- 245 (323)
.-+.++|++.|+++||.| .|+..+....+ .++..+.++ +.+.|.+.... .+...+++++.|+.+|++.
T Consensus 164 ~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~f--~a~~ay~iD---Gg~~g~i~~ea----~~~~~~~~~~~g~~~h~~~a 234 (414)
T COG2195 164 PEIPHGGIRGGFSPDEEIGGRGAANKDVARF--LADFAYTLD---GGPVGEIPREA----FNAAAVRATIVGPNVHPGSA 234 (414)
T ss_pred ccccccCeEEEecchHHhhhhhhhhccHHhh--hcceeEecC---CCccCeeeeec----cchheeeeeeeccCcCccch
Confidence 456789999999999999 68877765522 467777664 34556655442 2667789999999999994
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhccccCCCCCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 246 PQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 246 p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
+....||+..+.+.+..+..... ...++.+.|..++++..|.|.+++.....+|.......+..+..+++++
T Consensus 235 ~~~~i~a~~~a~e~~~~~~~~~~-----~e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~ 306 (414)
T COG2195 235 KGKMINALLLAAEFILELPLEEV-----PELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVV 306 (414)
T ss_pred HHHHhhHHHhhhhhhhcCCcccc-----cccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHH
Confidence 77888999988888877654321 1245677889999999999999999999999999987777777776654
No 69
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.52 E-value=2.2e-13 Score=126.44 Aligned_cols=129 Identities=23% Similarity=0.298 Sum_probs=105.0
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECC-CCCCeeEEEeccCcccC---------
Q 020649 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGS-GSPPFVALRADMDALPI--------- 129 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~-~~~~~ill~~H~Dtvp~--------- 129 (323)
+.+.+++++|+++|++++.|.++++++.++|+++|++++.+ ..+|++|.+.+ .++|+|+|.||||+|+.
T Consensus 3 ~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~D-~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~G 81 (343)
T TIGR03106 3 DYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYELT-RRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDNG 81 (343)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEC-CCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCCC
Confidence 45788899999999999999999999999999999998864 68899998843 34589999999999873
Q ss_pred -------cC----------------CC-------------------------CCc---------cCC-------------
Q 020649 130 -------QE----------------LV-------------------------EWE---------HKS------------- 139 (323)
Q Consensus 130 -------~~----------------~~-------------------------~w~---------~~p------------- 139 (323)
|. .. .|. .++
T Consensus 82 ~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd 161 (343)
T TIGR03106 82 RLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGD 161 (343)
T ss_pred eEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCC
Confidence 10 00 111 000
Q ss_pred ----------cCCCeEeeCCc--cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCCcH
Q 020649 140 ----------KIDGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGA 189 (323)
Q Consensus 140 ----------~~~g~l~g~G~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~ 189 (323)
..+|++|||+. |+++++++.+++.|++.+.+++.+|.++|+++||.|+|+
T Consensus 162 ~v~~~~~~~~~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~ga 223 (343)
T TIGR03106 162 FVAFDPQPEFLANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSGA 223 (343)
T ss_pred EEEECCccEEecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCccc
Confidence 13578999886 899999999999999877778899999999999999764
No 70
>PRK09961 exoaminopeptidase; Provisional
Probab=99.32 E-value=5.9e-11 Score=110.55 Aligned_cols=142 Identities=17% Similarity=0.226 Sum_probs=107.5
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEeccCcccC-----cC-------
Q 020649 64 KMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPI-----QE------- 131 (323)
Q Consensus 64 ~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~-----~~------- 131 (323)
+++++|+++|++|+.|.++++++.++|+++|.+++. +..+|+++++++.++|+|+|.||||+|+. .+
T Consensus 4 ~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~-D~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~~ 82 (344)
T PRK09961 4 SLLKALSEADAIASSEQEVRQILLEEADRLQKEVRF-DGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 82 (344)
T ss_pred HHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEE-CCCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEEE
Confidence 568999999999999999999999999999999876 47889999884444579999999999983 10
Q ss_pred -CCCCcc----------------------------CC-----------------------------------cCCCeEee
Q 020649 132 -LVEWEH----------------------------KS-----------------------------------KIDGKMHA 147 (323)
Q Consensus 132 -~~~w~~----------------------------~p-----------------------------------~~~g~l~g 147 (323)
..+|.. .+ ..++++.|
T Consensus 83 ~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~g 162 (344)
T PRK09961 83 PVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 162 (344)
T ss_pred eCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEEE
Confidence 001110 00 01234545
Q ss_pred CCc--cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEeccC
Q 020649 148 CGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVH 211 (323)
Q Consensus 148 ~G~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~ 211 (323)
+.- +.++++++.+++.+++. +++.+|.++|+..||.| .|++..... + ++|.+++++..+
T Consensus 163 kalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~--i-~pd~~I~vDv~~ 224 (344)
T PRK09961 163 KAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDTAC 224 (344)
T ss_pred eechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc--c-CCCEEEEEeccC
Confidence 443 59999999999999754 47899999999999999 588776543 2 578888887543
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.28 E-value=6.6e-11 Score=109.10 Aligned_cols=145 Identities=23% Similarity=0.342 Sum_probs=108.7
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCC-CCCeeEEEeccCcccCc-----C--
Q 020649 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSG-SPPFVALRADMDALPIQ-----E-- 131 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~ill~~H~Dtvp~~-----~-- 131 (323)
+.+.+++++|..+|++|+.|.++.+|++++|++++.+++.+ ..+|++|++++. ..|.|++.+|||.+..- +
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~D-~lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G 80 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEVD-RLGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDG 80 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEEc-CCCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCc
Confidence 45788899999999999999999999999999999998765 688999999653 34669999999998631 0
Q ss_pred ------CCCCccC------------------------C------c-----------------------------------
Q 020649 132 ------LVEWEHK------------------------S------K----------------------------------- 140 (323)
Q Consensus 132 ------~~~w~~~------------------------p------~----------------------------------- 140 (323)
-.+|... | .
T Consensus 81 ~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v 160 (355)
T COG1363 81 FLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFV 160 (355)
T ss_pred eEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEE
Confidence 0122111 0 0
Q ss_pred ---------CCCeEeeC--CccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEe
Q 020649 141 ---------IDGKMHAC--GHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLH 208 (323)
Q Consensus 141 ---------~~g~l~g~--G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~ 208 (323)
.++++-++ +.+.+++++|++++.| + +.+++.++.++|++.||.| .|++....+ . +.|.++.++
T Consensus 161 ~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~--i-~pd~aiavd 235 (355)
T COG1363 161 VFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR--I-KPDIAIAVD 235 (355)
T ss_pred EEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc--c-CCCEEEEEe
Confidence 01222222 2269999999999999 4 6789999999999999999 688766553 2 467888775
Q ss_pred cc
Q 020649 209 LV 210 (323)
Q Consensus 209 ~~ 210 (323)
..
T Consensus 236 ~~ 237 (355)
T COG1363 236 VT 237 (355)
T ss_pred cc
Confidence 43
No 72
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.27 E-value=1.6e-10 Score=107.48 Aligned_cols=142 Identities=18% Similarity=0.209 Sum_probs=106.3
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECC--CCCCeeEEEeccCcccC-----cC-----
Q 020649 64 KMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGS--GSPPFVALRADMDALPI-----QE----- 131 (323)
Q Consensus 64 ~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~--~~~~~ill~~H~Dtvp~-----~~----- 131 (323)
+++++|+++|++|+.|.+++++++++|++++.+++.+ ..+|++|.+++ +.+|+|+|.+|||+|+. .+
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~D-~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~ 80 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVETD-GLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFR 80 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEEC-CCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEE
Confidence 4588999999999999999999999999999987765 57899998844 34589999999999872 00
Q ss_pred ---CCCCcc-----------------------------------C---Cc------------------------------
Q 020649 132 ---LVEWEH-----------------------------------K---SK------------------------------ 140 (323)
Q Consensus 132 ---~~~w~~-----------------------------------~---p~------------------------------ 140 (323)
..+|.. + +.
T Consensus 81 ~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~ 160 (350)
T TIGR03107 81 VVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQ 160 (350)
T ss_pred EEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 001100 0 00
Q ss_pred -------CCCeEeeCCc--cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEecc
Q 020649 141 -------IDGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLV 210 (323)
Q Consensus 141 -------~~g~l~g~G~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~ 210 (323)
.++++.|+.- +.++++++.+++.+++. +++.++.++|++.||.| .||+..... . ++|.+++++..
T Consensus 161 ~~~~~~~~~~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~--i-~pD~aI~vDv~ 235 (350)
T TIGR03107 161 TETILTANGKNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK--F-NPDIFFAVDCS 235 (350)
T ss_pred CCeEEEcCCCEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh--C-CCCEEEEEecC
Confidence 0123444443 59999999999999864 47889999999999999 688866543 2 57888888754
Q ss_pred C
Q 020649 211 H 211 (323)
Q Consensus 211 ~ 211 (323)
+
T Consensus 236 ~ 236 (350)
T TIGR03107 236 P 236 (350)
T ss_pred C
Confidence 4
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.23 E-value=3.2e-10 Score=105.37 Aligned_cols=140 Identities=19% Similarity=0.223 Sum_probs=105.0
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEeccCcccC-----cC------
Q 020649 63 KKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALPI-----QE------ 131 (323)
Q Consensus 63 ~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp~-----~~------ 131 (323)
.+++++|+++|++|+.|.++++++.++|+.++.+++.+ ..+|+++..+ .++++|+|.||||.|+. .+
T Consensus 3 ~~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~~D-~~GNli~~~g-~~~~kvml~AHmDevG~mV~~I~~~G~l~~ 80 (356)
T PRK09864 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFD-GLGSFVARKG-NKGPKVAVVGHMDEVGFMVTHIDESGFLRF 80 (356)
T ss_pred HHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEeC-CCCcEEEEEecccccCEEEEEECCCCeEEE
Confidence 35689999999999999999999999999999998765 5789999874 33579999999999873 00
Q ss_pred --CCCCccC------------------------C------c---------------------------------------
Q 020649 132 --LVEWEHK------------------------S------K--------------------------------------- 140 (323)
Q Consensus 132 --~~~w~~~------------------------p------~--------------------------------------- 140 (323)
..+|... | .
T Consensus 81 ~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~ 160 (356)
T PRK09864 81 TTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEAN 160 (356)
T ss_pred EeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 0122100 0 0
Q ss_pred ----CCCeEeeCCc--cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEeccC
Q 020649 141 ----IDGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLVH 211 (323)
Q Consensus 141 ----~~g~l~g~G~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~~ 211 (323)
.++++.|+.- +.++++++.+++.+++ ++.++.++|++.||.| .||+..... . ++|.+++++..+
T Consensus 161 ~~~l~~~~i~~kalDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~--i-~PDiaIavDvt~ 231 (356)
T PRK09864 161 FACWGEDKVVGKALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEH--I-KPDVVIVLDTAV 231 (356)
T ss_pred cEEEcCCEEEEEeCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhc--C-CCCEEEEEeccc
Confidence 1123334432 5999999999999864 7789999999999999 688877654 2 578888887544
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.80 E-value=2.6e-08 Score=99.64 Aligned_cols=132 Identities=22% Similarity=0.332 Sum_probs=93.2
Q ss_pred HHHHHHHHhcC-CCCCc---ccHHHHHHHHHHHHHcCCcEEe-------c-----------------cCCceEEEEECCC
Q 020649 62 MKKMRRQIHEN-PELAY---EEFETSELIRRELDQLGIAYRW-------P-----------------VAKTGVVATVGSG 113 (323)
Q Consensus 62 l~~l~~~l~~i-ps~s~---~e~~~~~~l~~~l~~~G~~~~~-------~-----------------~~~~nvia~~~~~ 113 (323)
....+.++.++ |.+.+ +|..+.+|+.+++.++.=..+. + .+..|++.++..+
T Consensus 59 A~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~~k 138 (834)
T KOG2194|consen 59 ALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKISPK 138 (834)
T ss_pred HHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecCCC
Confidence 33444445444 44433 4568888998888776322111 0 0356899999432
Q ss_pred --CC-CeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCc-cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-Cc
Q 020649 114 --SP-PFVALRADMDALPIQELVEWEHKSKIDGKMHACGH-DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TG 188 (323)
Q Consensus 114 --~~-~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~-k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G 188 (323)
.. -.|++++|+|+||.++ |-|. ..++|++|+++|.+.+....+.++|+|+|..+||.+ .|
T Consensus 139 ~~~~~~~lLlnaHfDSvpt~~---------------gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L~g 203 (834)
T KOG2194|consen 139 NGNDKNALLLNAHFDSVPTGP---------------GATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGLLG 203 (834)
T ss_pred CCCccceeeeeccccccCCCC---------------CCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchhhh
Confidence 33 3899999999999652 4443 377899999999999888788999999999999999 69
Q ss_pred HHHHHh-cCccCCccEEEEEe
Q 020649 189 AKDMIQ-EGVLENVEAIFGLH 208 (323)
Q Consensus 189 ~~~~~~-~~~~~~~d~~~~~~ 208 (323)
+..++. +.+.+.+.+++.++
T Consensus 204 sH~FItQH~w~~~~ka~INLe 224 (834)
T KOG2194|consen 204 SHAFITQHPWSKNIKAVINLE 224 (834)
T ss_pred cccceecChhhhhhheEEecc
Confidence 988887 34545577777764
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.40 E-value=4.3e-07 Score=76.71 Aligned_cols=81 Identities=27% Similarity=0.508 Sum_probs=59.3
Q ss_pred eeEEEeccCcccCcCCCCCccCCcCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHH
Q 020649 117 FVALRADMDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDM 192 (323)
Q Consensus 117 ~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~ 192 (323)
.|++.+|+|+++ +... + -++.|+ -+|++++|+.++.|++.+.+++++|+|+|..+||.| .|++++
T Consensus 2 ~ivi~aH~Ds~~-~~~~---------~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~ 70 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDAD---------G-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAF 70 (179)
T ss_dssp EEEEEEE--BES-CCC----------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHH
T ss_pred EEEEEeecCCCC-CcCC---------C-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHH
Confidence 589999999998 2111 1 245666 399999999999999977778899999999999999 599999
Q ss_pred Hhc--CccCCccEEEEEe
Q 020649 193 IQE--GVLENVEAIFGLH 208 (323)
Q Consensus 193 ~~~--~~~~~~d~~~~~~ 208 (323)
+++ ...+++.+++.++
T Consensus 71 ~~~~~~~~~~~~~~inlD 88 (179)
T PF04389_consen 71 VEHDHEELDNIAAVINLD 88 (179)
T ss_dssp HHHHHCHHHHEEEEEEEC
T ss_pred HHhhhcccccceeEEecc
Confidence 963 1223456666664
No 76
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=97.89 E-value=0.00019 Score=63.44 Aligned_cols=106 Identities=22% Similarity=0.330 Sum_probs=77.9
Q ss_pred cHHHHHHHHHHHHHcCCcEEecc----------CCceEEEEECCCCCCeeEEEeccCcccCcCCCCCccCCcCCCe-Eee
Q 020649 79 EFETSELIRRELDQLGIAYRWPV----------AKTGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKIDGK-MHA 147 (323)
Q Consensus 79 e~~~~~~l~~~l~~~G~~~~~~~----------~~~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~-l~g 147 (323)
-.++.+||.+.|+++|+.++.+. .-.|+++++......-+++.+|||+--... +. +-+
T Consensus 71 ~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A~r~lVlachydsk~~p~-----------~~~vga 139 (338)
T KOG3946|consen 71 SRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNASRYLVLACHYDSKIFPG-----------GMFVGA 139 (338)
T ss_pred cHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCcchheeeecccccccCCC-----------cceEee
Confidence 37888999999999999987542 135789998655567899999999973211 22 233
Q ss_pred CCccHHHHHHHHHHHHHHHcc----CCCCeEEEEEeEcCCCC----C---C--cHHHHHhc
Q 020649 148 CGHDAHVAMLLGAAKILQEMR----ETLKGTVVLIFQPAEER----G---T--GAKDMIQE 195 (323)
Q Consensus 148 ~G~k~~~a~~l~a~~~l~~~~----~~~~~~i~~~~~~~EE~----g---~--G~~~~~~~ 195 (323)
-|+..++|+++..++++.+.- ....-.+.++|..+||. | + |++++.++
T Consensus 140 tdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRhLA~~ 200 (338)
T KOG3946|consen 140 TDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRHLAAK 200 (338)
T ss_pred ccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHHHHHH
Confidence 445688999999999886532 23446789999999985 3 3 89998875
No 77
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=97.85 E-value=8.7e-05 Score=67.70 Aligned_cols=63 Identities=25% Similarity=0.350 Sum_probs=48.8
Q ss_pred CeEeeCCc--cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcHHHHHhcCccCCccEEEEEecc
Q 020649 143 GKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGAKDMIQEGVLENVEAIFGLHLV 210 (323)
Q Consensus 143 g~l~g~G~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~~~~~~~~~~~~~d~~~~~~~~ 210 (323)
+++.|+.- ..++++++.+++.+++.+ ++.++.|+|++.||.| .|++..... . ++|.+++++..
T Consensus 126 ~~i~gkalDdR~g~~~lle~l~~l~~~~--~~~~v~~v~tvqEEvG~rGA~~aa~~--i-~PD~ai~vD~~ 191 (292)
T PF05343_consen 126 GRIVGKALDDRAGCAVLLELLRELKEKE--LDVDVYFVFTVQEEVGLRGAKTAAFR--I-KPDIAIAVDVT 191 (292)
T ss_dssp TEEEETTHHHHHHHHHHHHHHHHHTTSS---SSEEEEEEESSCTTTSHHHHHHHHH--H--CSEEEEEEEE
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHhhcC--CCceEEEEEEeeeeecCcceeecccc--c-CCCEEEEEeee
Confidence 45667665 599999999999999754 5599999999999999 588877654 2 46888877653
No 78
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=97.30 E-value=0.00084 Score=64.77 Aligned_cols=65 Identities=31% Similarity=0.365 Sum_probs=52.3
Q ss_pred CCCeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-CcH
Q 020649 114 SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-TGA 189 (323)
Q Consensus 114 ~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~G~ 189 (323)
..+.+++.+|+|++|. +.|+ -+|++++|++++.|+... ++.+|.|++...||.| .|+
T Consensus 207 ~~~~~~~~a~~~s~~~-----------------~~GA~DNasGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS 267 (435)
T COG2234 207 SDSLGLLGAHIDSVPT-----------------GPGADDNASGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGS 267 (435)
T ss_pred CCceeeecccccCCcC-----------------CCCcccccHHHHHHHHHHHHHhcCC--CCceEEEEEecchhhccccc
Confidence 3456777777777663 3455 389999999999999865 8899999999999999 699
Q ss_pred HHHHhcCc
Q 020649 190 KDMIQEGV 197 (323)
Q Consensus 190 ~~~~~~~~ 197 (323)
.+++.+..
T Consensus 268 ~~~~~~~~ 275 (435)
T COG2234 268 EAYVKRLS 275 (435)
T ss_pred HHHHhcCC
Confidence 99998744
No 79
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=96.93 E-value=0.016 Score=54.35 Aligned_cols=96 Identities=19% Similarity=0.271 Sum_probs=66.7
Q ss_pred CceEEEEEC-C-C------CCCeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCc-cHHHHHHHHHHHHHHHcc----C
Q 020649 103 KTGVVATVG-S-G------SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGH-DAHVAMLLGAAKILQEMR----E 169 (323)
Q Consensus 103 ~~nvia~~~-~-~------~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~-k~~~a~~l~a~~~l~~~~----~ 169 (323)
-.|+.+++. + + .-|+|++.+||||..+-+ |.=-|.++ .+|+.++|+.++.+.+.- -
T Consensus 193 i~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~lsvgADSNGSGvvaLLelarlfSkly~ypsT 261 (555)
T KOG2526|consen 193 ILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------GLSVGADSNGSGVVALLELARLFSKLYDYPST 261 (555)
T ss_pred cceEEeecccccccccccccCCeEEEEEeccccccCC-----------CCCCCCCCCCccHHHHHHHHHHHHHHhcCccc
Confidence 467888884 2 1 249999999999997643 11123333 478889999999887532 2
Q ss_pred CCCeEEEEEeEcCCCCC-CcHHHHHhc---CccCCccEEEEEec
Q 020649 170 TLKGTVVLIFQPAEERG-TGAKDMIQE---GVLENVEAIFGLHL 209 (323)
Q Consensus 170 ~~~~~i~~~~~~~EE~g-~G~~~~~~~---~~~~~~d~~~~~~~ 209 (323)
..+.|+.|+.+.+--.. .|++..++- .+.+.+|+++|++.
T Consensus 262 rakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLdt 305 (555)
T KOG2526|consen 262 RAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLDT 305 (555)
T ss_pred ccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhhh
Confidence 35789999999886544 588888762 22336899998753
No 80
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=96.65 E-value=0.0059 Score=61.73 Aligned_cols=77 Identities=23% Similarity=0.330 Sum_probs=58.8
Q ss_pred CceEEEEE-CCC-CCCeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCccHHHHHHHHHHHHH---HHccCCCCeEEEE
Q 020649 103 KTGVVATV-GSG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKIL---QEMRETLKGTVVL 177 (323)
Q Consensus 103 ~~nvia~~-~~~-~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~~~l---~~~~~~~~~~i~~ 177 (323)
-.|+++.+ |.. ++.-|++.+|.|..-.| +-+..+|.+.++...+.+ ++.+.+|.++|+|
T Consensus 338 i~NIig~I~Gs~epD~~ViigahrDSw~~G----------------a~dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F 401 (702)
T KOG2195|consen 338 IQNIIGKIEGSEEPDRYVIIGAHRDSWTFG----------------AIDPNSGTALLLEIARALSKLKKRGWRPRRTILF 401 (702)
T ss_pred eeeEEEEEecCcCCCeEEEEeccccccccC----------------CcCCCccHHHHHHHHHHHHHHHHcCCCccceEEE
Confidence 46899999 533 67889999999987531 111146677777777665 4678999999999
Q ss_pred EeEcCCCCCC-cHHHHHhc
Q 020649 178 IFQPAEERGT-GAKDMIQE 195 (323)
Q Consensus 178 ~~~~~EE~g~-G~~~~~~~ 195 (323)
+...+||.|. |+..++++
T Consensus 402 ~sWdAeEfGliGStE~~E~ 420 (702)
T KOG2195|consen 402 ASWDAEEFGLLGSTEWAEE 420 (702)
T ss_pred EEccchhccccccHHHHHH
Confidence 9999999994 99888875
No 81
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=95.65 E-value=0.039 Score=48.66 Aligned_cols=66 Identities=23% Similarity=0.361 Sum_probs=52.1
Q ss_pred CeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCc---cHHHHHHHHHHHHHHHc---cCCCCeEEEEEeEcCCCCC-Cc
Q 020649 116 PFVALRADMDALPIQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEM---RETLKGTVVLIFQPAEERG-TG 188 (323)
Q Consensus 116 ~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~---k~~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~~EE~g-~G 188 (323)
|.|++.+.||+...-+ + -+.|+ -+|++++|+++++|.+. ...++++|.|.|..+|-.| -|
T Consensus 1 ~iIlv~armDs~s~F~-----------~--~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiG 67 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH-----------D--LSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIG 67 (234)
T ss_pred CEEEEEecccchhccc-----------C--CCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccc
Confidence 6789999999986422 1 14565 38999999999999865 2357899999999999999 69
Q ss_pred HHHHHh
Q 020649 189 AKDMIQ 194 (323)
Q Consensus 189 ~~~~~~ 194 (323)
++.++.
T Consensus 68 S~R~vy 73 (234)
T PF05450_consen 68 SSRFVY 73 (234)
T ss_pred hHHHHH
Confidence 888874
No 82
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=94.48 E-value=0.79 Score=44.76 Aligned_cols=127 Identities=17% Similarity=0.167 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEecc-------CCceEEEEE-CCCCCCeeEEEeccCc---
Q 020649 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------AKTGVVATV-GSGSPPFVALRADMDA--- 126 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nvia~~-~~~~~~~ill~~H~Dt--- 126 (323)
...+-+.+.|+|+..|+.--.....++++.+.+++.|++++..+ +-+.+++.= |+...|.++..-+.-.
T Consensus 169 ~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~l~Y~g~~~~ 248 (483)
T PRK00913 169 AIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVLEYKGGKKP 248 (483)
T ss_pred HHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEEEEECCCCCe
Confidence 34667888999999998766668889999999999999987543 233455543 3333455544443310
Q ss_pred -ccCcCCCCCccCC-----cCCCeEee-CCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCCc
Q 020649 127 -LPIQELVEWEHKS-----KIDGKMHA-CGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG 188 (323)
Q Consensus 127 -vp~~~~~~w~~~p-----~~~g~l~g-~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G 188 (323)
+-+| .+-.||+ .....+++ ++..+|.|+.+++++++.+.+ ++.||+.+....|=.-+|
T Consensus 249 i~LVG--KGITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~lk--l~vnV~~v~~l~ENm~~~ 313 (483)
T PRK00913 249 IALVG--KGLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAELK--LPVNVVGVVAACENMPSG 313 (483)
T ss_pred EEEEc--CceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHcC--CCceEEEEEEeeccCCCC
Confidence 0111 1223332 01111221 122599999999999999865 688999998888864333
No 83
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=94.14 E-value=1.5 Score=42.72 Aligned_cols=128 Identities=17% Similarity=0.123 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEecc-------CCceEEEEE-CCCCCCeeEEEeccCcccC
Q 020649 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV-------AKTGVVATV-GSGSPPFVALRADMDALPI 129 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nvia~~-~~~~~~~ill~~H~Dtvp~ 129 (323)
...+-+.+.|+|+.-|+--......++++++.+++.|+++++.+ +-+.+++.- |+...|.++..-+...-+.
T Consensus 152 ~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~Y~g~~~~ 231 (468)
T cd00433 152 AIAEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLEYKGKGAS 231 (468)
T ss_pred HHHHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEEECCCCCC
Confidence 34667888999999998766668899999999999999988643 233445443 3333455554444422110
Q ss_pred cCC-----CCCccCC----cC-CCeEee-CCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC
Q 020649 130 QEL-----VEWEHKS----KI-DGKMHA-CGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT 187 (323)
Q Consensus 130 ~~~-----~~w~~~p----~~-~g~l~g-~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~ 187 (323)
... .+-.||+ .+ ...+.+ ....+|.|+.+++++++.+.+ ++.||+.+....|=.-+
T Consensus 232 ~~~i~LVGKGiTFDsGG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l~--~~vnV~~i~~~~EN~is 298 (468)
T cd00433 232 KKPIALVGKGITFDTGGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAELK--LPVNVVGVLPLAENMIS 298 (468)
T ss_pred CCcEEEEcCceEecCCCccccCccChhhccccchhHHHHHHHHHHHHHcC--CCceEEEEEEeeecCCC
Confidence 000 1222322 00 011111 111499999999999999875 68899988888875433
No 84
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=93.80 E-value=0.69 Score=42.44 Aligned_cols=112 Identities=21% Similarity=0.239 Sum_probs=68.8
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEecc--------------------CCce-EEEEE-CCC--CCCeeE
Q 020649 64 KMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV--------------------AKTG-VVATV-GSG--SPPFVA 119 (323)
Q Consensus 64 ~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~--------------------~~~n-via~~-~~~--~~~~il 119 (323)
.+.|+|..-|.---.....++++++.+++.|++++..+ .++. ++.++ +++ ..++|+
T Consensus 2 n~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i~ 81 (311)
T PF00883_consen 2 NLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPIA 81 (311)
T ss_dssp HHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEEE
T ss_pred hHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccEE
Confidence 56889999998777778999999999999999887532 1112 33444 332 235555
Q ss_pred EEec---cCcccCcCCCCCccCCcCCCeEee-CCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCC
Q 020649 120 LRAD---MDALPIQELVEWEHKSKIDGKMHA-CGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER 185 (323)
Q Consensus 120 l~~H---~Dtvp~~~~~~w~~~p~~~g~l~g-~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 185 (323)
|.|- +|+=.. .-+ ..+.+.+ +..++|.|+.+++++++.+.+ ++.||+.+....|=.
T Consensus 82 LVGKGiTFDtGG~------~lK--p~~~M~~Mk~DM~GAAaV~ga~~aia~lk--~~vnV~~~l~~~EN~ 141 (311)
T PF00883_consen 82 LVGKGITFDTGGL------SLK--PSGGMEGMKYDMGGAAAVLGAMRAIAKLK--LPVNVVAVLPLAENM 141 (311)
T ss_dssp EEEEEEEEEE-TT------SSS--CSTTGGGGGGGGHHHHHHHHHHHHHHHCT---SSEEEEEEEEEEE-
T ss_pred EEcceEEEecCCc------cCC--CCcchhhcccCcchHHHHHHHHHHHHHcC--CCceEEEEEEccccc
Confidence 5542 222111 000 0111221 222699999999999999865 678888888777643
No 85
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=92.68 E-value=2.5 Score=41.76 Aligned_cols=126 Identities=16% Similarity=0.046 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEE-ecc-------CCceEEEEECCCCCCeeEEEeccCcccC
Q 020649 58 TVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYR-WPV-------AKTGVVATVGSGSPPFVALRADMDALPI 129 (323)
Q Consensus 58 ~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~-~~~-------~~~nvia~~~~~~~~~ill~~H~Dtvp~ 129 (323)
...+-+.+.|+|+.-|+.-......++++.+.+.+.|++++ +.+ +-+.+++.-.+...|.-++.-+|.--+.
T Consensus 210 ~ia~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~Y~g~~~ 289 (569)
T PTZ00412 210 IIGHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFEYIGNPR 289 (569)
T ss_pred HHHHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEEeCCCCC
Confidence 34566788999999998666667788888888888999985 432 2334555442222333344444432111
Q ss_pred cCC------CCCccCC----cC-CCeEee-CCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCC
Q 020649 130 QEL------VEWEHKS----KI-DGKMHA-CGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER 185 (323)
Q Consensus 130 ~~~------~~w~~~p----~~-~g~l~g-~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 185 (323)
.+. .+-.||+ .+ .+.+.. .+..+|.|+.+++++++.+.+ ++.||+.+....|=.
T Consensus 290 ~~~~iaLVGKGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~Lk--lpvnVv~iiplaENm 355 (569)
T PTZ00412 290 SSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKLQ--LPVNVVAAVGLAENA 355 (569)
T ss_pred CCCcEEEEcCceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHcC--CCeEEEEEEEhhhcC
Confidence 000 1122322 00 011111 111499999999999998865 778999888888764
No 86
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=91.89 E-value=1.9 Score=42.02 Aligned_cols=127 Identities=17% Similarity=0.132 Sum_probs=80.6
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcEEecc------CCce-EEEEE-CCCCCCeeEEEeccCcccCcC
Q 020649 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQLGIAYRWPV------AKTG-VVATV-GSGSPPFVALRADMDALPIQE 131 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~n-via~~-~~~~~~~ill~~H~Dtvp~~~ 131 (323)
..-..+.|++..-|.--......++++.+++...|..++..+ ..-| +++.- +....|.++...|.++-|...
T Consensus 189 ~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~~~ 268 (513)
T KOG2597|consen 189 AAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGADK 268 (513)
T ss_pred HHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCCcc
Confidence 556677888888776555557889999999999998876542 1223 33332 333346666676666544322
Q ss_pred C-----CCCccCC-----cCCCeEee-CCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCCc
Q 020649 132 L-----VEWEHKS-----KIDGKMHA-CGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG 188 (323)
Q Consensus 132 ~-----~~w~~~p-----~~~g~l~g-~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G 188 (323)
. .+..|+. ...+.+.+ |+.++|.|+.+++++++.+.+ ++-|+.+++.-.|-.-+|
T Consensus 269 ~i~lvGKGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcENm~sg 334 (513)
T KOG2597|consen 269 TILLVGKGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCENMPSG 334 (513)
T ss_pred eEEEEecceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeeccCCCc
Confidence 1 1223332 11122222 444699999999999998865 558899999888875444
No 87
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=91.42 E-value=0.36 Score=47.28 Aligned_cols=43 Identities=9% Similarity=0.121 Sum_probs=38.0
Q ss_pred CCceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHhC
Q 020649 275 DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVLI 323 (323)
Q Consensus 275 ~~~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i~ 323 (323)
...++|+|.+.++ |++|.+++|+|++|+++++++.+.++++++
T Consensus 336 ~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~ 378 (477)
T TIGR01893 336 VESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIESIAK 378 (477)
T ss_pred EEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHHHhh
Confidence 3568999999876 789999999999999999999999998763
No 88
>PRK05015 aminopeptidase B; Provisional
Probab=90.66 E-value=8.9 Score=36.73 Aligned_cols=124 Identities=16% Similarity=0.094 Sum_probs=73.4
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHc---CCcEEecc-------CCceEEEEECCCCCCeeEEEeccCcccC
Q 020649 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQL---GIAYRWPV-------AKTGVVATVGSGSPPFVALRADMDALPI 129 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~---G~~~~~~~-------~~~nvia~~~~~~~~~ill~~H~Dtvp~ 129 (323)
-+...+.|+++.-|..--.....++...+.++++ ++++++.+ +-..+++.-.+...|+.++.-+|. |.
T Consensus 100 ~~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~~pP~lv~L~Y~--~~ 177 (424)
T PRK05015 100 LKIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSERPPVLLALDYN--PT 177 (424)
T ss_pred HHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCCCCCEEEEEEec--CC
Confidence 3457789999999986555567777788888776 57766532 233445443333344455544443 32
Q ss_pred cCCCCCccC--CcCCCeEeeC------------Cc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCCc
Q 020649 130 QELVEWEHK--SKIDGKMHAC------------GH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG 188 (323)
Q Consensus 130 ~~~~~w~~~--p~~~g~l~g~------------G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G 188 (323)
++. +.|.. -+-.|.-|-. ++ .+|.|+.+++++++.+.+ ++.+|..+....|=.-+|
T Consensus 178 g~~-~~~v~~aLVGKGITFDSGG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~~--l~~nV~~il~~aENmisg 250 (424)
T PRK05015 178 GDP-DAPVYACLVGKGITFDSGGYSIKPSAGMDSMKSDMGGAATVTGALALAITRG--LNKRVKLFLCCAENLISG 250 (424)
T ss_pred CCC-CCCeeEEEecCceEecCCCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhcC--CCceEEEEEEecccCCCC
Confidence 221 11110 0112222211 11 489999999998887764 778999999888865443
No 89
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=85.63 E-value=15 Score=34.45 Aligned_cols=71 Identities=24% Similarity=0.240 Sum_probs=46.8
Q ss_pred ceEEEEECCCCCCeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCccHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCC
Q 020649 104 TGVVATVGSGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAE 183 (323)
Q Consensus 104 ~nvia~~~~~~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 183 (323)
.|+|+.-++ ..+++++.+|.|+=-.|. ++.=.|++..++++..|...+. .+-++..++|
T Consensus 179 y~~Ia~~~~-en~vv~i~AH~DHW~~G~----------------tDN~lg~~~AV~~~~~lr~~~~----~~~lv~FtAE 237 (486)
T COG4882 179 YNVIAVDGG-ENGVVLIGAHLDHWYTGF----------------TDNILGVAQAVETAGRLRGRGL----AAGLVVFTAE 237 (486)
T ss_pred EEEEEecCC-CCCceEEeechhhhhhcc----------------cchhhhHHHHHHHHHHHhhcCc----ceeEEEEecc
Confidence 455554333 357899999999876542 2223577888888888876542 3556666777
Q ss_pred CCCC----------cHHHHHhc
Q 020649 184 ERGT----------GAKDMIQE 195 (323)
Q Consensus 184 E~g~----------G~~~~~~~ 195 (323)
|.|+ |++.++++
T Consensus 238 E~g~p~~~sfyWa~GSr~~lk~ 259 (486)
T COG4882 238 EHGMPGMASFYWAAGSRGLLKE 259 (486)
T ss_pred ccCCCCCcceeecccchHHHhh
Confidence 7652 77777775
No 90
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=83.91 E-value=12 Score=37.14 Aligned_cols=90 Identities=14% Similarity=0.240 Sum_probs=59.3
Q ss_pred HHHHHHHHHcCCcEEeccC---------CceEEEEEC--CC-CCCeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCcc
Q 020649 84 ELIRRELDQLGIAYRWPVA---------KTGVVATVG--SG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHD 151 (323)
Q Consensus 84 ~~l~~~l~~~G~~~~~~~~---------~~nvia~~~--~~-~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k 151 (323)
.|+...+++.|.++..+.. +.|+++.+. .+ +...+++. ||-+.. -|- ..
T Consensus 92 ~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl~-----vP~~~~-------------~~~-~~ 152 (617)
T KOG3566|consen 92 AWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVLV-----VPYGRS-------------SGS-NS 152 (617)
T ss_pred hHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEEE-----EecccC-------------CCc-ch
Confidence 4577788888998765542 789999982 22 35678775 452110 011 14
Q ss_pred HHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCCcHHHHHhc
Q 020649 152 AHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQE 195 (323)
Q Consensus 152 ~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~ 195 (323)
++++-+++.++.+++. .-...||+++++.++-. |.+..+++
T Consensus 153 ~~v~l~lsla~~f~r~-~yWsKDII~v~~d~~~~--g~~AwLea 193 (617)
T KOG3566|consen 153 ASVALLLSLADYFSRW-VYWSKDIIFVFTDGPAL--GLDAWLEA 193 (617)
T ss_pred hHHHHHHHHHHHhcCC-eeecccEEEEEeCCccc--cHHHHHHH
Confidence 6777788888887764 34788999999988533 55666655
No 91
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=81.55 E-value=34 Score=33.59 Aligned_cols=124 Identities=22% Similarity=0.208 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcC-CcEEecc-------CCceEEEEE-CCCCCCeeEEEecc---C-
Q 020649 59 VNWMKKMRRQIHENPELAYEEFETSELIRRELDQLG-IAYRWPV-------AKTGVVATV-GSGSPPFVALRADM---D- 125 (323)
Q Consensus 59 ~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G-~~~~~~~-------~~~nvia~~-~~~~~~~ill~~H~---D- 125 (323)
.-+-+.+.|+|+..|..--.....++. ++.|++.+ +++++.+ +-+.+++.- |+...|.++..-.- +
T Consensus 166 i~~~v~~aRdLvN~P~n~l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prlivl~y~g~~~~ 244 (485)
T COG0260 166 IAEGVNLARDLVNTPANILTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLIVLEYNGKGKA 244 (485)
T ss_pred HHHHHHHHHHHhhCCcccCCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEEEEEcCCCCCC
Confidence 356788999999999876666777777 77787776 7776543 233344443 22223444332111 0
Q ss_pred cccCc-CCCCCccCCcCCCe-Ee-e---CCc---cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC
Q 020649 126 ALPIQ-ELVEWEHKSKIDGK-MH-A---CGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT 187 (323)
Q Consensus 126 tvp~~-~~~~w~~~p~~~g~-l~-g---~G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~ 187 (323)
-.|.. -..+-.||+ +|. |- + .++ .+|.|+.++++.++.+.+ ++.||+.+....|=.-+
T Consensus 245 ~~~iaLVGKGitFDs--GGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l~--l~vnv~~vl~~~ENm~~ 311 (485)
T COG0260 245 KKPIALVGKGITFDS--GGISIKPAAGMDTMKYDMGGAAAVLGAMRALAELK--LPVNVVGVLPAVENMPS 311 (485)
T ss_pred CceEEEEcCceeecC--CCcccCCccchhhhhcccchHHHHHHHHHHHHHcC--CCceEEEEEeeeccCCC
Confidence 00000 001222322 110 00 1 112 389999999999999875 77889988888875433
No 92
>PRK02256 putative aminopeptidase 1; Provisional
Probab=75.50 E-value=5.7 Score=38.75 Aligned_cols=42 Identities=24% Similarity=0.232 Sum_probs=29.9
Q ss_pred CCeEeeCCc--cHHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC
Q 020649 142 DGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT 187 (323)
Q Consensus 142 ~g~l~g~G~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~ 187 (323)
+..|.|.+- ..++.+++.+++.+. .++..++++++..||.|+
T Consensus 251 ~efI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs 294 (462)
T PRK02256 251 RSLIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGS 294 (462)
T ss_pred cceeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCC
Confidence 356666555 367777777766543 356789999999999994
No 93
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=74.74 E-value=35 Score=33.76 Aligned_cols=72 Identities=17% Similarity=0.242 Sum_probs=51.9
Q ss_pred CceEEEEEC--CC-CCCeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCccHHHHHHHHHHHHHHHccCCCCeEEEEEe
Q 020649 103 KTGVVATVG--SG-SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIF 179 (323)
Q Consensus 103 ~~nvia~~~--~~-~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~ 179 (323)
+.|++|.+. .+ +...+++..-++... + ....++++.+++.++.+++.. -+.+||+|++
T Consensus 3 G~nvy~i~rapR~d~tEaivl~~~~~~~~--------------~----~~n~~~v~l~lal~~~~~~~~-~wsKDii~l~ 63 (504)
T PF04114_consen 3 GTNVYGILRAPRGDGTEAIVLVVPWRDSD--------------G----EYNAGGVALALALARYFRRQS-YWSKDIIFLF 63 (504)
T ss_pred ceEEEEEEecCCCCCceeEEEEEecCCCC--------------c----ccchhhHHHHHHHHHHhhhch-hhhccEEEEe
Confidence 679999882 22 357899987765432 1 111578999999999999764 4689999999
Q ss_pred EcCCCCCCcHHHHHhc
Q 020649 180 QPAEERGTGAKDMIQE 195 (323)
Q Consensus 180 ~~~EE~g~G~~~~~~~ 195 (323)
+.+|. .|.+..+++
T Consensus 64 ~~~~~--~g~~awl~~ 77 (504)
T PF04114_consen 64 TDDEL--AGMQAWLEA 77 (504)
T ss_pred cCCcc--hHHHHHHHH
Confidence 87654 467788776
No 94
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=63.11 E-value=1.1e+02 Score=27.23 Aligned_cols=85 Identities=21% Similarity=0.316 Sum_probs=56.0
Q ss_pred CCCeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCccHHHHHHHHHHHHH--HHccCCCCeEEEEEeEcCCCC------
Q 020649 114 SPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKIL--QEMRETLKGTVVLIFQPAEER------ 185 (323)
Q Consensus 114 ~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~~~l--~~~~~~~~~~i~~~~~~~EE~------ 185 (323)
..|++.+.|-+-.+.+.++ +-|. -.+++|.++++-.|++.+ ++.|..++++|++.-.-+--.
T Consensus 30 ~aptlGIiGRLGgigARP~--------~iGl--VSDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~ 99 (276)
T PF06675_consen 30 SAPTLGIIGRLGGIGARPE--------RIGL--VSDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHD 99 (276)
T ss_pred CCCeeEEEeeccccccccc--------ceee--eecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCC
Confidence 4699999988877765331 1122 234478999888888865 478889999999985544332
Q ss_pred -----CC--cHHHHHhcCccCCccEEEEEe
Q 020649 186 -----GT--GAKDMIQEGVLENVEAIFGLH 208 (323)
Q Consensus 186 -----g~--G~~~~~~~~~~~~~d~~~~~~ 208 (323)
++ +...+.++......|+++.++
T Consensus 100 PvpFM~sPv~~~~~n~~EV~p~mdAILSiD 129 (276)
T PF06675_consen 100 PVPFMGSPVDMATMNRHEVDPEMDAILSID 129 (276)
T ss_pred CcccccCccCHHHHHHhhcCcccceEEEEe
Confidence 22 445555554445678888875
No 95
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=48.41 E-value=22 Score=34.23 Aligned_cols=68 Identities=19% Similarity=0.190 Sum_probs=42.1
Q ss_pred CeeEEEeccCcccC-cCCCCCccCC------cCCCeEe-eCCccH-HHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC
Q 020649 116 PFVALRADMDALPI-QELVEWEHKS------KIDGKMH-ACGHDA-HVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG 186 (323)
Q Consensus 116 ~~ill~~H~Dtvp~-~~~~~w~~~p------~~~g~l~-g~G~k~-~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g 186 (323)
..+.|.+|+|.||. +..+...+.| +++.++- ..|++- ++++.++. |. ....++.+.++++||.+
T Consensus 62 ~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~---L~----~~~~P~~~~~t~~~ei~ 134 (414)
T COG2195 62 VPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILKATLGADNIGLAIGLAV---LS----PEHFPLEVLLTGDEEIT 134 (414)
T ss_pred eeEEeeccccccccccccccccccccccccccCCceeeeccCcchhhhhhHHhh---cC----cccCCceeeeecceEEe
Confidence 56889999999994 4444444443 4556665 466543 22222222 21 13568999999999987
Q ss_pred -CcHH
Q 020649 187 -TGAK 190 (323)
Q Consensus 187 -~G~~ 190 (323)
.|+.
T Consensus 135 ~dGa~ 139 (414)
T COG2195 135 TDGAT 139 (414)
T ss_pred ccCcc
Confidence 3655
No 96
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=44.66 E-value=43 Score=32.95 Aligned_cols=40 Identities=5% Similarity=0.101 Sum_probs=32.7
Q ss_pred ceEEEEEEEcCCcCccccceEEEEEEEeccChhhHHHHHHHHHHHh
Q 020649 277 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEVL 322 (323)
Q Consensus 277 ~~~~i~~i~gg~~~nviP~~a~~~~diR~~~~~~~~~~~~~i~~~i 322 (323)
.+.|++.+.- --+.+.+.+++|+++..+.+++.++++++.
T Consensus 344 ~S~Nlg~v~~------~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~ 383 (485)
T PRK15026 344 TSLNVGVVTM------TDNNVEIHCLIRSLIDSGKDYVVSMLDSLG 383 (485)
T ss_pred eeeEEEEEEE------eCCEEEEEEEecCCCchHHHHHHHHHHHHH
Confidence 5677777753 236799999999999999999999998764
No 97
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=43.66 E-value=15 Score=30.26 Aligned_cols=32 Identities=16% Similarity=0.024 Sum_probs=26.6
Q ss_pred hcCCCCCcccHHHHHHHHHHHHHcCCcEEecc
Q 020649 70 HENPELAYEEFETSELIRRELDQLGIAYRWPV 101 (323)
Q Consensus 70 ~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~ 101 (323)
+-..+..|+.+++|++|+..|++.|++++.++
T Consensus 5 IlYstr~GqT~kIA~~iA~~L~e~g~qvdi~d 36 (175)
T COG4635 5 ILYSTRDGQTRKIAEYIASHLRESGIQVDIQD 36 (175)
T ss_pred EEEecCCCcHHHHHHHHHHHhhhcCCeeeeee
Confidence 34456667889999999999999999998764
No 98
>PRK02813 putative aminopeptidase 2; Provisional
Probab=42.46 E-value=35 Score=33.04 Aligned_cols=49 Identities=18% Similarity=0.255 Sum_probs=31.0
Q ss_pred cHHHHHHHHHHHHHcCCcEE-e------cc--------CCceEEEEE-CCCC---CCeeEEEeccCcc
Q 020649 79 EFETSELIRRELDQLGIAYR-W------PV--------AKTGVVATV-GSGS---PPFVALRADMDAL 127 (323)
Q Consensus 79 e~~~~~~l~~~l~~~G~~~~-~------~~--------~~~nvia~~-~~~~---~~~ill~~H~Dtv 127 (323)
+..+.+++++.|++.||.-- . .. ....++|.. |..+ ..--++.+|.|..
T Consensus 21 ~~hav~~~~~~L~~~Gf~~l~e~~~w~l~~g~kyy~~r~~~sliAf~vg~~~~~~~g~~iv~aH~DsP 88 (428)
T PRK02813 21 PFHAVANVAQRLEAAGFTELDETDAWKLEPGGRYYVVRNGSSLIAFRVGEGAPAETGFRIVGAHTDSP 88 (428)
T ss_pred HHHHHHHHHHHHHHcCCeeccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCeEEEEEeccCC
Confidence 47788999999999998631 1 11 234566665 4442 2346778888863
No 99
>PRK02813 putative aminopeptidase 2; Provisional
Probab=42.03 E-value=97 Score=30.00 Aligned_cols=34 Identities=29% Similarity=0.185 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCC-C---cHH
Q 020649 152 AHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-T---GAK 190 (323)
Q Consensus 152 ~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~---G~~ 190 (323)
.++.+++.++..+. . +..++++++..||.| . |+.
T Consensus 237 ~~~~~~l~al~~~~---~--~~~~~~~~~d~EEVGs~~~~GA~ 274 (428)
T PRK02813 237 SSCHAGLEALLAAA---S--DATNVLAAFDHEEVGSATKQGAD 274 (428)
T ss_pred HHHHHHHHHHHhcC---C--CCeEEEEEEecCccCCCCCcccC
Confidence 44555555544332 1 678999999999998 3 665
No 100
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=40.64 E-value=48 Score=32.44 Aligned_cols=45 Identities=11% Similarity=-0.045 Sum_probs=24.2
Q ss_pred CeEeeCCc--cHHHHHHHHHHHHHHHccCCCCeEEEEEe-EcCCCCCC
Q 020649 143 GKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIF-QPAEERGT 187 (323)
Q Consensus 143 g~l~g~G~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~-~~~EE~g~ 187 (323)
+.+.|.+- ..++.+++.++..+.....+.+.++.+++ +..||.|+
T Consensus 243 e~i~s~rlDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs 290 (465)
T PTZ00371 243 EFISSPRLDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGS 290 (465)
T ss_pred CeEEEecchhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCC
Confidence 34444443 36666666666554321001234455554 99999994
No 101
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=37.11 E-value=1.1e+02 Score=28.87 Aligned_cols=87 Identities=15% Similarity=0.060 Sum_probs=47.3
Q ss_pred HHHHHHcCCcEEecc---CCceEEEEE--CCCCCCeeEEEeccCcccCcCCCCCccCCcCCCeEeeCCccHHHHHHHHHH
Q 020649 87 RRELDQLGIAYRWPV---AKTGVVATV--GSGSPPFVALRADMDALPIQELVEWEHKSKIDGKMHACGHDAHVAMLLGAA 161 (323)
Q Consensus 87 ~~~l~~~G~~~~~~~---~~~nvia~~--~~~~~~~ill~~H~Dtvp~~~~~~w~~~p~~~g~l~g~G~k~~~a~~l~a~ 161 (323)
.+.|++--++|.++. .+.--++++ ++...+.|+|.+|+.+=.- +..-=+|++.+...+
T Consensus 96 ~~~L~dg~Y~V~IdS~l~~G~L~ygE~~ipG~s~~EillsthiCHPsm-----------------ANdnLSG~~v~~~La 158 (386)
T PF09940_consen 96 LDALPDGEYEVVIDSTLEDGSLTYGEFVIPGESDEEILLSTHICHPSM-----------------ANDNLSGPAVLTFLA 158 (386)
T ss_dssp HHT--SSEEEEEEEEEEES-EEEEEEEEE--SSS-EEEEEEE----S------------------TTTTHHHHHHHHHHH
T ss_pred HhhCCCCceEEEEeeeecCCceeEEEEEecCCCCCeEEEEEeccCccc-----------------ccccccHHHHHHHHH
Confidence 334444335554432 222235665 5556789999999987532 222237888899999
Q ss_pred HHHHHccCCCCeEEEEEeEcCCCCCCcHHHHHhc
Q 020649 162 KILQEMRETLKGTVVLIFQPAEERGTGAKDMIQE 195 (323)
Q Consensus 162 ~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~ 195 (323)
+.|++.. .+.+.+|+|.|+ --|+...+.+
T Consensus 159 ~~L~~~~--~rytYRflf~Pe---TIGsI~yLsk 187 (386)
T PF09940_consen 159 KWLKQLP--NRYTYRFLFVPE---TIGSITYLSK 187 (386)
T ss_dssp HHHTTS----SSEEEEEEE-T---THHHHHHHHH
T ss_pred HHHhcCC--cCceEEEEEccc---cHHHHHHHHH
Confidence 9998764 448999999985 2366655543
No 102
>PRK02256 putative aminopeptidase 1; Provisional
Probab=35.83 E-value=1.8e+02 Score=28.43 Aligned_cols=60 Identities=15% Similarity=0.102 Sum_probs=38.2
Q ss_pred HHHHHhcCCCCCcccHHHHHHHHHHHHHcCCcE-Eec------------cCCceEEEEE-CCCC-C-CeeEEEeccCccc
Q 020649 65 MRRQIHENPELAYEEFETSELIRRELDQLGIAY-RWP------------VAKTGVVATV-GSGS-P-PFVALRADMDALP 128 (323)
Q Consensus 65 l~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~-~~~------------~~~~nvia~~-~~~~-~-~~ill~~H~Dtvp 128 (323)
++..+-+-|+ +..+.+++++.|++.||.- ... .....++|.. |..+ + .--++.+|.|.-.
T Consensus 31 ~~~Fl~~spt----p~Hav~~~~~~L~~~GF~el~e~~~l~~g~kyy~~r~~ssliAf~ig~~~~~~g~~iv~aHtDsP~ 106 (462)
T PRK02256 31 YKDFLSKCKT----EREAVKEIIELAEEKGFINLEEIIGLKPGDKVYAVNRGKSVALAVIGKEPLEEGLNIIGAHIDSPR 106 (462)
T ss_pred HHHHHHcCCC----HHHHHHHHHHHHHHcCCeecccccccCCCCEEEEEcCCCEEEEEEeCCCCCCCceEEEEEecCCCC
Confidence 3444444454 4778899999999999963 110 1234577766 5442 2 3458899999854
No 103
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=35.21 E-value=1.5e+02 Score=28.95 Aligned_cols=51 Identities=18% Similarity=0.183 Sum_probs=34.5
Q ss_pred ccHHHHHHHHHHHHHcCCcEE-e------cc--------CCceEEEEE-CCCC----CCeeEEEeccCccc
Q 020649 78 EEFETSELIRRELDQLGIAYR-W------PV--------AKTGVVATV-GSGS----PPFVALRADMDALP 128 (323)
Q Consensus 78 ~e~~~~~~l~~~l~~~G~~~~-~------~~--------~~~nvia~~-~~~~----~~~ill~~H~Dtvp 128 (323)
.+..+.+++++.|++.||.-- . .. ....++|.. |... ..-.++.+|.|.-.
T Consensus 21 t~~hav~~~~~~L~~~GF~~l~e~~~w~l~~g~kyyv~r~~ssl~Af~vg~~~~~~~~g~~ivgaHtDsP~ 91 (465)
T PTZ00371 21 SPFHAVQELKERLKKSGFKQLNEGENWKLEKGGKYYLTRNNSTIVAFTVGKKFDAPNGGFKIVGAHTDSPC 91 (465)
T ss_pred CHHHHHHHHHHHHHHCcCEEccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCCeEEEEEeccCCC
Confidence 357889999999999999631 1 11 234577776 5442 23568899999743
No 104
>PF14133 DUF4300: Domain of unknown function (DUF4300)
Probab=31.83 E-value=2.5e+02 Score=25.06 Aligned_cols=61 Identities=11% Similarity=0.076 Sum_probs=43.0
Q ss_pred HHHHhcCCCCCcc-cHHHHHHHHHHHHHcCCcEEeccCCceEEEEECCCCCCeeEEEeccCccc
Q 020649 66 RRQIHENPELAYE-EFETSELIRRELDQLGIAYRWPVAKTGVVATVGSGSPPFVALRADMDALP 128 (323)
Q Consensus 66 ~~~l~~ips~s~~-e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~ill~~H~Dtvp 128 (323)
..-+.++|..... ...-++-+.+.++++|++. .+....+|..+-..+....+|.||.=+.-
T Consensus 132 ~~lFs~i~t~~t~D~~~h~~~i~k~wk~rgi~F--~~~k~slISV~~h~~d~~~lFvGH~GVLv 193 (250)
T PF14133_consen 132 TTLFSRIPTENTKDIKVHAEKIQKYWKERGIKF--NNDKASLISVFLHDPDDNSLFVGHTGVLV 193 (250)
T ss_pred HHHhCcCCccccCCHHHHHHHHHHHHHHcCcee--CCCceEEEEEEEEcCCCCeEEeeeEEEEE
Confidence 3344467765443 3567788999999999998 34456677766333567899999998873
No 105
>PRK06156 hypothetical protein; Provisional
Probab=26.36 E-value=63 Score=32.02 Aligned_cols=25 Identities=24% Similarity=0.385 Sum_probs=21.0
Q ss_pred eEEEEEEEcCCcCccccceEEEEEE
Q 020649 278 VVSVAMINGGSSYNMIPDSATVAGT 302 (323)
Q Consensus 278 ~~~i~~i~gg~~~nviP~~a~~~~d 302 (323)
..++..++||...|+||+.|.+.+.
T Consensus 240 ~~~l~~~~gG~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 240 GAEIVAMTGGAFANQIPQTAVATLS 264 (520)
T ss_pred ceeEEEEEcCCcCCCCCCccEEEEe
Confidence 4667889999999999999987743
No 106
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=24.95 E-value=83 Score=30.23 Aligned_cols=33 Identities=21% Similarity=0.172 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHccCCCCeEEEEEeEcCCCCCC
Q 020649 154 VAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT 187 (323)
Q Consensus 154 ~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~ 187 (323)
..+..+++++|... .....+.++++..-||.||
T Consensus 243 ~~~~~a~m~AL~~~-~~~~~~~v~~~fD~EEIGS 275 (437)
T COG1362 243 LICCHAGMEALLAA-ANSDKTCVLALFDHEEIGS 275 (437)
T ss_pred hHHHHHHHHHHHhc-cCCCCceEEEEechhhccc
Confidence 34445555655543 3456778888999999984
No 107
>PF14000 Packaging_FI: DNA packaging protein FI
Probab=23.02 E-value=1.7e+02 Score=23.13 Aligned_cols=39 Identities=10% Similarity=0.297 Sum_probs=32.3
Q ss_pred hhhHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHcC
Q 020649 56 QDTVNWMKKMRRQIHENPELAYEEFETSELIRRELDQLG 94 (323)
Q Consensus 56 ~~~~~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~G 94 (323)
+++..+|.+|...|-+-|..||.-..++..+.+|=+++.
T Consensus 3 ee~l~RL~eLa~~LGRE~d~SGSaAeiaqRVAEwEEEl~ 41 (125)
T PF14000_consen 3 EENLARLRELAAQLGREPDMSGSAAEIAQRVAEWEEELD 41 (125)
T ss_pred HHHHHHHHHHHHHhCcCCCccccHHHHHHHHHHHHHHHh
Confidence 457788999999999999999987777777777777776
No 108
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=22.95 E-value=2.1e+02 Score=27.64 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=35.6
Q ss_pred ccHHHHHHHHHHHHHcCCcEEe-----c----------cCCceEEEEE-CCC---CCCeeEEEeccCcc
Q 020649 78 EEFETSELIRRELDQLGIAYRW-----P----------VAKTGVVATV-GSG---SPPFVALRADMDAL 127 (323)
Q Consensus 78 ~e~~~~~~l~~~l~~~G~~~~~-----~----------~~~~nvia~~-~~~---~~~~ill~~H~Dtv 127 (323)
.+..+..++++.|.+.||..-. . ..+.+++|.+ |.+ ..+--++.+|.|.-
T Consensus 22 Tpyh~v~~i~~~L~~~Gf~~l~e~~~w~~~~ggkyf~~r~gssliAf~ig~~~~~~~gf~IigaHtDSP 90 (437)
T COG1362 22 TPYHVVANIAERLLKAGFRELEEKDAWKDKPGGKYFVTRNGSSLIAFIIGKKWKLESGFRIIGAHTDSP 90 (437)
T ss_pred ChHHHHHHHHHHHHHcCchhhhhhhcccccCCCeEEEEcCCceEEEEEecCCCCCCCCeEEEEeecCCC
Confidence 3578889999999999986321 1 1345788887 544 24667889999984
No 109
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=22.88 E-value=1.3e+02 Score=27.32 Aligned_cols=30 Identities=23% Similarity=0.319 Sum_probs=21.7
Q ss_pred eEEEEEEEcCCcCccccceEEEEEEEeccCh
Q 020649 278 VVSVAMINGGSSYNMIPDSATVAGTFRAFNK 308 (323)
Q Consensus 278 ~~~i~~i~gg~~~nviP~~a~~~~diR~~~~ 308 (323)
.+.+..++=|-... +|-.|.+.||+|+.|+
T Consensus 161 ~l~v~i~SFGfK~G-iP~dAD~VfDvRfLpN 190 (284)
T PF03668_consen 161 RLTVTIQSFGFKYG-IPPDADLVFDVRFLPN 190 (284)
T ss_pred ceEEEEEEeccccC-CCCCCCEEEEcCcCCC
Confidence 35555555555443 8889999999999885
No 110
>PF01221 Dynein_light: Dynein light chain type 1 ; InterPro: IPR001372 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella. The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits (see IPR004273 from INTERPRO), intermediate size subunits and small subunits. Among the small subunits, there is a family of highly conserved proteins which make up this family [, ]. Both type 1 (DLC1) and 2 (DLC2) dynein light chains have a similar two-layer alpha-beta core structure consisting of beta-alpha(2)-beta-X-beta(2) [, ].; GO: 0007017 microtubule-based process, 0005875 microtubule associated complex; PDB: 1F95_A 1F96_A 1F3C_A 3P8M_B 2XQQ_C 1RE6_A 1CMI_A 1PWK_A 1PWJ_A 4DS1_C ....
Probab=22.49 E-value=1.5e+02 Score=21.45 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHc-CCcE
Q 020649 60 NWMKKMRRQIHENPELAYEEFETSELIRRELDQL-GIAY 97 (323)
Q Consensus 60 ~~l~~l~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~ 97 (323)
++++++.++..+.- ..+.++|++|+++|.+. |-..
T Consensus 19 ~~~~~~~~~a~~~~---~~~~eiA~~iK~~lD~~yG~~W 54 (89)
T PF01221_consen 19 EEAIELAKEALKKY---QDEKEIAEFIKQELDKKYGPTW 54 (89)
T ss_dssp HHHHHHHHHHHHHC---SSHHHHHHHHHHHHHHHHSS-E
T ss_pred HHHHHHHHHHHHHC---CcHHHHHHHHHHHHhcccCCce
Confidence 44444444444321 15688999999999875 5443
No 111
>PF08854 DUF1824: Domain of unknown function (DUF1824); InterPro: IPR014953 This uncharacterised group of proteins are principally found in cyanobacteria. ; PDB: 2Q22_B.
Probab=21.20 E-value=3.5e+02 Score=21.33 Aligned_cols=48 Identities=15% Similarity=-0.051 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHcCCcEEe------cc---------CCceEEEEECCCCCCeeEEEeccCcc
Q 020649 80 FETSELIRRELDQLGIAYRW------PV---------AKTGVVATVGSGSPPFVALRADMDAL 127 (323)
Q Consensus 80 ~~~~~~l~~~l~~~G~~~~~------~~---------~~~nvia~~~~~~~~~ill~~H~Dtv 127 (323)
.++...|+++++++|++.-. .+ ..+++..+.-.|...-|++.+|.|--
T Consensus 48 ~~ai~ALr~~~~alg~~~~~~~~~~~~~GpVfLK~N~~tg~~yv~~y~G~~rGVLiScqs~~~ 110 (125)
T PF08854_consen 48 EEAIAALRSYEQALGYPPLEPLDSPPIEGPVFLKANQKTGSCYVRSYTGLGRGVLISCQSDDD 110 (125)
T ss_dssp HHHHHHHHHHHHHTT------------SSSEEEEEETTT--EEEEE--S--BEEEEEEE-SST
T ss_pred HHHHHHHHHHHHHcCCCccCCCCCCCCCCCEEEEecCCCCcEEEeecCCccceEEEEeccCCc
Confidence 66778899999999997611 01 12334555544446889999998763
Done!