Query 020650
Match_columns 323
No_of_seqs 137 out of 1397
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 06:10:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020650.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020650hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vas_A Putative adenosine kina 100.0 5.5E-54 1.9E-58 386.0 31.3 320 4-323 24-365 (370)
2 3loo_A Anopheles gambiae adeno 100.0 1.5E-53 5.2E-58 382.7 33.0 319 5-323 24-362 (365)
3 3otx_A Adenosine kinase, putat 100.0 3.9E-53 1.3E-57 378.0 34.3 321 3-323 6-346 (347)
4 1bx4_A Protein (adenosine kina 100.0 1.9E-50 6.6E-55 360.3 35.5 319 4-322 6-344 (345)
5 3uq6_A Adenosine kinase, putat 100.0 1.7E-50 5.7E-55 363.7 31.8 318 6-323 28-367 (372)
6 2abs_A Adenosine kinase, AK; r 100.0 5.8E-48 2E-52 348.7 32.5 306 2-317 30-377 (383)
7 3ry7_A Ribokinase; transferase 100.0 3E-49 1E-53 346.7 17.8 292 5-321 3-300 (304)
8 4e3a_A Sugar kinase protein; s 100.0 8.8E-47 3E-51 336.9 31.6 294 4-318 25-340 (352)
9 1rkd_A Ribokinase; carbohydrat 100.0 6.4E-48 2.2E-52 339.0 20.9 296 1-321 1-300 (309)
10 3lhx_A Ketodeoxygluconokinase; 100.0 2.8E-47 9.5E-52 336.3 24.5 292 1-320 1-308 (319)
11 2fv7_A Ribokinase; structural 100.0 1E-47 3.5E-52 340.6 20.0 298 1-322 21-326 (331)
12 4du5_A PFKB; structural genomi 100.0 1.7E-46 5.7E-51 333.4 26.8 294 1-322 23-331 (336)
13 2rbc_A Sugar kinase, AGR_C_456 100.0 6.6E-47 2.2E-51 336.6 21.8 285 4-321 29-321 (343)
14 3kzh_A Probable sugar kinase; 100.0 3.8E-47 1.3E-51 336.7 20.1 291 2-318 4-297 (328)
15 3ljs_A Fructokinase; fructokia 100.0 2.2E-47 7.6E-52 339.6 18.6 295 1-321 1-321 (338)
16 3go6_A Ribokinase RBSK; phosph 100.0 4.5E-47 1.5E-51 333.2 17.9 276 1-322 16-298 (310)
17 4e69_A 2-dehydro-3-deoxyglucon 100.0 2.5E-45 8.6E-50 324.7 28.6 289 3-319 22-320 (328)
18 3pl2_A Sugar kinase, ribokinas 100.0 1.4E-45 5E-50 325.4 26.6 294 1-322 5-311 (319)
19 3ktn_A Carbohydrate kinase, PF 100.0 2.4E-46 8.3E-51 334.0 21.3 295 5-321 3-324 (346)
20 3ikh_A Carbohydrate kinase; tr 100.0 3.2E-47 1.1E-51 332.7 15.0 276 1-321 1-281 (299)
21 3iq0_A Putative ribokinase II; 100.0 2.1E-46 7.1E-51 332.2 20.0 294 1-321 1-305 (330)
22 3h49_A Ribokinase; transferase 100.0 2.9E-45 1E-49 324.1 27.2 298 1-321 1-307 (325)
23 3hj6_A Fructokinase, FRK; fruc 100.0 1.4E-46 4.8E-51 332.8 17.9 292 4-322 21-321 (327)
24 2c4e_A Sugar kinase MJ0406; tr 100.0 5.9E-46 2E-50 325.4 19.3 286 1-321 1-292 (302)
25 2nwh_A AGR_C_3442P, carbohydra 100.0 4.7E-45 1.6E-49 321.7 23.0 291 5-320 4-299 (317)
26 3umo_A 6-phosphofructokinase i 100.0 4.3E-45 1.5E-49 321.0 21.6 293 3-322 1-300 (309)
27 1vm7_A Ribokinase; TM0960, str 100.0 1.1E-44 3.6E-49 318.5 23.4 285 4-321 14-303 (311)
28 2qcv_A Putative 5-dehydro-2-de 100.0 6.3E-44 2.1E-48 316.7 28.0 297 1-321 8-318 (332)
29 2jg1_A Tagatose-6-phosphate ki 100.0 1.4E-44 4.6E-49 320.3 22.4 291 5-322 21-318 (330)
30 2v78_A Fructokinase; transfera 100.0 1.8E-44 6.1E-49 317.6 21.8 284 6-321 3-303 (313)
31 4e84_A D-beta-D-heptose 7-phos 100.0 2.2E-45 7.5E-50 327.6 15.7 291 4-322 53-350 (352)
32 2f02_A Tagatose-6-phosphate ki 100.0 2.8E-44 9.5E-49 317.6 22.1 293 5-321 3-300 (323)
33 2dcn_A Hypothetical fructokina 100.0 3E-44 1E-48 315.9 21.1 284 5-321 2-301 (311)
34 3ie7_A LIN2199 protein; phosph 100.0 2.4E-44 8.4E-49 317.6 20.3 288 1-321 1-296 (320)
35 4gm6_A PFKB family carbohydrat 100.0 5.5E-44 1.9E-48 319.4 22.6 299 2-317 22-332 (351)
36 1tyy_A Putative sugar kinase; 100.0 2.4E-44 8.1E-49 319.8 18.8 285 1-321 21-322 (339)
37 3cqd_A 6-phosphofructokinase i 100.0 6.6E-44 2.2E-48 313.4 20.4 287 7-321 4-299 (309)
38 1v1a_A 2-keto-3-deoxygluconate 100.0 3.3E-43 1.1E-47 308.9 24.6 282 5-321 2-296 (309)
39 2ajr_A Sugar kinase, PFKB fami 100.0 2E-44 7E-49 319.4 15.8 289 5-321 13-317 (331)
40 3ewm_A Uncharacterized sugar k 100.0 4.9E-43 1.7E-47 308.3 23.6 281 5-322 2-294 (313)
41 2hlz_A Ketohexokinase; non-pro 100.0 5E-43 1.7E-47 308.0 23.2 280 4-314 17-308 (312)
42 3b1n_A Ribokinase, putative; r 100.0 1.3E-42 4.5E-47 307.0 22.2 282 6-321 2-298 (326)
43 2abq_A Fructose 1-phosphate ki 100.0 8.8E-43 3E-47 305.8 20.4 286 6-321 2-290 (306)
44 2qhp_A Fructokinase; NP_810670 100.0 2.1E-42 7.1E-47 302.1 22.5 277 4-319 3-288 (296)
45 2pkf_A Adenosine kinase; trans 100.0 1.5E-42 5E-47 307.8 21.8 285 5-321 11-312 (334)
46 3kd6_A Carbohydrate kinase, PF 100.0 6.7E-42 2.3E-46 300.9 25.8 277 1-321 1-290 (313)
47 2jg5_A Fructose 1-phosphate ki 100.0 1.5E-42 5.1E-47 304.4 19.3 284 6-321 2-290 (306)
48 2afb_A 2-keto-3-deoxygluconate 100.0 1.5E-41 5E-46 303.6 23.2 295 5-321 13-336 (351)
49 3bf5_A Ribokinase related prot 100.0 1.9E-42 6.4E-47 303.2 14.8 268 4-320 20-292 (306)
50 1vk4_A PFKB carbohydrate kinas 100.0 1.3E-38 4.6E-43 278.0 19.8 271 6-322 13-292 (298)
51 2yxt_A Pyridoxal kinase; beta 99.9 3.4E-25 1.2E-29 194.3 9.2 220 62-312 12-270 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 4.1E-24 1.4E-28 184.9 12.5 226 61-313 21-268 (283)
53 1jxh_A Phosphomethylpyrimidine 99.9 7.5E-23 2.6E-27 177.3 12.2 161 140-312 95-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.9 8.6E-21 2.9E-25 161.8 15.6 162 139-312 70-244 (258)
55 2i5b_A Phosphomethylpyrimidine 99.8 1.4E-19 4.9E-24 155.3 14.8 162 139-312 74-250 (271)
56 3pzs_A PM kinase, pyridoxamine 99.8 1.7E-19 5.7E-24 156.1 12.9 167 138-312 76-260 (289)
57 3h74_A Pyridoxal kinase; PSI-I 99.8 8.1E-19 2.8E-23 150.9 16.8 161 139-312 74-249 (282)
58 3mbh_A Putative phosphomethylp 99.8 4.1E-18 1.4E-22 147.3 13.4 161 139-312 77-259 (291)
59 3zs7_A Pyridoxal kinase; trans 99.8 6.3E-18 2.2E-22 146.6 13.3 161 138-312 75-262 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.7 1E-15 3.5E-20 130.9 14.1 160 133-303 52-223 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.6 2.3E-14 7.7E-19 134.2 12.8 159 139-310 91-274 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.3 4.9E-11 1.7E-15 101.2 14.6 162 133-308 50-224 (265)
63 3bgk_A SMU.573, putative uncha 99.0 2.7E-09 9.2E-14 92.3 10.5 156 135-310 121-284 (311)
64 3dzv_A 4-methyl-5-(beta-hydrox 99.0 2E-08 6.7E-13 84.9 15.0 161 132-305 51-230 (273)
65 2r3b_A YJEF-related protein; p 98.9 3.7E-09 1.3E-13 91.4 10.5 155 135-310 107-267 (310)
66 3rss_A Putative uncharacterize 98.8 5E-08 1.7E-12 89.7 12.5 159 134-309 315-474 (502)
67 3rpz_A ADP/ATP-dependent NAD(P 98.6 1.4E-07 4.7E-12 80.2 10.1 144 137-303 96-244 (279)
68 3drw_A ADP-specific phosphofru 98.5 4.2E-06 1.4E-10 75.4 16.6 167 38-214 112-322 (474)
69 3nl6_A Thiamine biosynthetic b 98.4 1.4E-05 4.7E-10 74.2 16.8 161 133-304 299-495 (540)
70 3hpd_A Hydroxyethylthiazole ki 98.3 2.2E-05 7.5E-10 65.7 14.2 158 133-304 50-220 (265)
71 1ua4_A Glucokinase, ADP-depend 98.0 0.00041 1.4E-08 62.6 16.8 164 41-213 109-304 (455)
72 1l2l_A ADP-dependent glucokina 97.6 0.0007 2.4E-08 61.0 12.8 75 138-213 227-307 (457)
73 3k5w_A Carbohydrate kinase; 11 97.5 0.00059 2E-08 62.2 10.4 149 138-309 291-446 (475)
74 1gc5_A ADP-dependent glucokina 96.4 0.051 1.7E-06 49.1 12.9 164 41-213 117-317 (467)
75 1gc5_A ADP-dependent glucokina 66.3 5.6 0.00019 35.9 4.3 32 257-290 432-464 (467)
76 3can_A Pyruvate-formate lyase- 60.2 44 0.0015 25.3 8.1 79 141-226 5-88 (182)
77 3vzx_A Heptaprenylglyceryl pho 58.3 32 0.0011 27.6 7.1 51 138-199 30-80 (228)
78 2orv_A Thymidine kinase; TP4A 49.1 58 0.002 26.3 7.1 62 135-199 86-147 (234)
79 1i4n_A Indole-3-glycerol phosp 44.1 39 0.0013 27.6 5.5 62 136-206 120-183 (251)
80 2fcj_A Small toprim domain pro 43.0 47 0.0016 23.6 5.1 77 139-227 26-102 (119)
81 3okp_A GDP-mannose-dependent a 42.1 34 0.0012 29.2 5.3 66 1-92 1-92 (394)
82 2j9r_A Thymidine kinase; TK1, 39.9 47 0.0016 26.4 5.2 59 139-199 101-159 (214)
83 1ztd_A Hypothetical protein PF 39.6 29 0.00099 24.1 3.3 30 271-300 64-94 (133)
84 3w01_A Heptaprenylglyceryl pho 38.2 61 0.0021 26.1 5.7 51 138-199 35-85 (235)
85 2fq6_A Cystathionine beta-lyas 36.1 1.4E+02 0.0046 26.2 8.3 38 139-176 167-207 (415)
86 3osu_A 3-oxoacyl-[acyl-carrier 32.5 1.1E+02 0.0036 24.3 6.5 47 42-92 13-59 (246)
87 3tfo_A Putative 3-oxoacyl-(acy 32.5 1E+02 0.0035 25.0 6.4 45 42-92 13-58 (264)
88 3dhn_A NAD-dependent epimerase 31.2 40 0.0014 26.3 3.6 36 135-170 63-105 (227)
89 2yci_X 5-methyltetrahydrofolat 28.9 2E+02 0.0069 23.6 7.6 61 138-202 46-109 (271)
90 1f6y_A 5-methyltetrahydrofolat 28.9 2.4E+02 0.0081 23.0 8.1 60 138-201 37-99 (262)
91 3ri6_A O-acetylhomoserine sulf 27.4 1.3E+02 0.0045 26.5 6.6 37 139-175 167-204 (430)
92 3sju_A Keto reductase; short-c 26.9 1.5E+02 0.0051 24.1 6.6 45 43-92 34-78 (279)
93 3ndn_A O-succinylhomoserine su 26.5 1.5E+02 0.0053 25.8 6.9 38 139-176 166-204 (414)
94 3vk5_A MOEO5; TIM barrel, tran 26.2 1E+02 0.0034 25.7 5.1 50 138-199 65-121 (286)
95 4f3y_A DHPR, dihydrodipicolina 25.5 1.6E+02 0.0054 24.2 6.3 60 134-201 68-129 (272)
96 2gk4_A Conserved hypothetical 25.4 75 0.0026 25.6 4.2 47 3-68 2-51 (232)
97 2gta_A Hypothetical protein YP 24.8 73 0.0025 22.4 3.6 28 276-303 67-94 (119)
98 4a29_A Engineered retro-aldol 24.5 2.1E+02 0.0073 23.3 6.7 65 135-208 122-187 (258)
99 3enk_A UDP-glucose 4-epimerase 24.1 90 0.0031 26.0 4.8 25 42-69 14-38 (341)
100 3cra_A Protein MAZG; tandem-re 23.7 69 0.0024 26.3 3.7 28 276-303 196-223 (265)
101 1vmg_A Hypothetical protein SS 23.7 70 0.0024 21.6 3.2 26 276-301 67-92 (95)
102 2l69_A Rossmann 2X3 fold prote 23.7 1.7E+02 0.0057 19.5 6.6 49 152-204 10-62 (134)
103 1qyc_A Phenylcoumaran benzylic 23.6 1.8E+02 0.006 23.7 6.5 24 42-68 13-36 (308)
104 3c8f_A Pyruvate formate-lyase 23.5 1.8E+02 0.0063 22.6 6.4 81 141-226 71-156 (245)
105 2q5z_A MAZG, hypothetical prot 23.5 82 0.0028 22.0 3.7 28 276-303 79-106 (114)
106 3db2_A Putative NADPH-dependen 23.1 3.4E+02 0.011 22.8 9.1 41 135-176 85-125 (354)
107 1qyd_A Pinoresinol-lariciresin 22.8 1.8E+02 0.0062 23.7 6.5 24 42-68 13-36 (313)
108 1oc2_A DTDP-glucose 4,6-dehydr 21.1 1.2E+02 0.0041 25.3 5.0 26 42-68 13-38 (348)
109 4fn4_A Short chain dehydrogena 20.4 3.4E+02 0.012 21.8 7.8 58 139-201 31-91 (254)
110 3ijp_A DHPR, dihydrodipicolina 20.2 2.8E+02 0.0094 23.0 6.8 60 135-201 84-144 (288)
No 1
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=5.5e-54 Score=386.00 Aligned_cols=320 Identities=37% Similarity=0.663 Sum_probs=280.9
Q ss_pred cceEEEeCCceeeeEeecChh------------------HHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEE
Q 020650 4 EGILLGMGNPLLDISSVVDDD------------------FLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 65 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~------------------~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~ 65 (323)
+.+|+++|++++|++..++.. .+|.+++..........+||++.|+|.++++|++.|.++.+
T Consensus 24 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~~ 103 (370)
T 3vas_A 24 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 103 (370)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEEE
T ss_pred CccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEEE
Confidence 458999999999999999931 27888999999999999999999999999985444599999
Q ss_pred EeeeecCchhHHHHHHHHHcCceeEEeec-CCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEE
Q 020650 66 IGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 144 (323)
Q Consensus 66 ~~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 144 (323)
+|.+|+|.+|+.+++.|++.||+++++.. ++.+|+.+++++++|+|+++.+.+++..++++++......+.+++++++|
T Consensus 104 ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~v~ 183 (370)
T 3vas_A 104 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYY 183 (370)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEE
T ss_pred EEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEeCCceeEEEccchhhhCCHHHcCchhhHHHHhhCCEEE
Confidence 99999999999999999999999999875 77899999998888899998888888889988887643456789999999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHH
Q 020650 145 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 224 (323)
Q Consensus 145 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~ 224 (323)
++|+.+.++++.+..+++.++++++++++|++.+.|.+...+.+..+++++|++++|++|++.+++..+.+.++++++++
T Consensus 184 ~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~ 263 (370)
T 3vas_A 184 IAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATAR 263 (370)
T ss_dssp EEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHH
T ss_pred EEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHHHH
Confidence 99988777788999999999999999999999888777677788899999999999999999999987766678899999
Q ss_pred HHhcCCccccC-CccEEEEeeCCCceEEee--CCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHH
Q 020650 225 KLSQWPKASEI-RKRTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 301 (323)
Q Consensus 225 ~l~~~~~~~~~-~~~~vvit~G~~G~~~~~--~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A 301 (323)
.+.++.+.... +++.++||+|++|+++++ +++.+++++++++..+++||+||||+|.|||+++|++|+++++|+++|
T Consensus 264 ~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~A 343 (370)
T 3vas_A 264 YIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAA 343 (370)
T ss_dssp HHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 88431100013 789999999999999998 778888887765555899999999999999999999999999999999
Q ss_pred hHHHHHHhhhcCccCCCCCCCC
Q 020650 302 CYTSHVIIQRSGCTYPEKPEFN 323 (323)
Q Consensus 302 ~~~Aa~~~~~~G~~~p~~~~~~ 323 (323)
+++|+++|++.|+.+|..++|+
T Consensus 344 ~aaAa~~v~~~G~~~p~~~~~~ 365 (370)
T 3vas_A 344 VKAAAYIICRSGFSLGSRDSYS 365 (370)
T ss_dssp HHHHHHHHTSSSSCCCCGGGGC
T ss_pred HHHHHHHHcccCCcCCCCccce
Confidence 9999999999999999988764
No 2
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-53 Score=382.74 Aligned_cols=319 Identities=49% Similarity=0.894 Sum_probs=275.1
Q ss_pred ceEEEeCCceeeeEeecChhH------------------HhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEE
Q 020650 5 GILLGMGNPLLDISSVVDDDF------------------LNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 66 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~------------------~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~ 66 (323)
.+|+++|++++|++..+++.+ +|.+++.+........+||++.|+|.++++|.++|.++.++
T Consensus 24 ~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~i 103 (365)
T 3loo_A 24 GMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIFF 103 (365)
T ss_dssp TSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEEE
T ss_pred ccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEEE
Confidence 479999999999999999843 36678888877889999999999999999865567999999
Q ss_pred eeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEe
Q 020650 67 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIA 146 (323)
Q Consensus 67 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 146 (323)
|.+|+|.+|+.+++.|++.||+++++..++.+|+++++++++++|+++.+.+++..++++++..+...+.+++++++|++
T Consensus 104 g~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~v~i~ 183 (365)
T 3loo_A 104 GCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYVS 183 (365)
T ss_dssp EEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEETTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSEEEEE
T ss_pred EEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEECCceEEEeccchHhhCCHhHcCchhhHHHHhhCCEEEEe
Confidence 99999999999999999999999998767778999998888888888888888888998888754445678899999999
Q ss_pred ccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHH
Q 020650 147 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 226 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l 226 (323)
|+.+..+++.+.++++.++++++++++|++.+.|.+...+.+..+++++|++++|++|++.+++..+.+.++++++++.+
T Consensus 184 G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l 263 (365)
T 3loo_A 184 GFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKRI 263 (365)
T ss_dssp GGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHHH
T ss_pred eeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHHHHH
Confidence 98877778889999999999999999999988877777788899999999999999999999998777778899999998
Q ss_pred hcCCccccCCccEEEEeeCCCceEEe--eCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHH
Q 020650 227 SQWPKASEIRKRTAVITQGADPVVVA--QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 304 (323)
Q Consensus 227 ~~~~~~~~~~~~~vvit~G~~G~~~~--~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~ 304 (323)
.++.+....+++.+|||+|++|++++ ++++.++++++++++.+++|||||||+|.|||+++|++|+++++|+++|+++
T Consensus 264 ~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~a~~~ 343 (365)
T 3loo_A 264 AALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRTVDVCIKCGIWA 343 (365)
T ss_dssp HTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 43211111378999999999999999 7777888887655444799999999999999999999999999999999999
Q ss_pred HHHHhhhcCccCCCCCCCC
Q 020650 305 SHVIIQRSGCTYPEKPEFN 323 (323)
Q Consensus 305 Aa~~~~~~G~~~p~~~~~~ 323 (323)
|+++|++.|+.+|..++|+
T Consensus 344 Aa~~v~~~G~~~p~~~~~~ 362 (365)
T 3loo_A 344 AREIIQRSGCTFEGEPSFC 362 (365)
T ss_dssp HHHHHHHGGGGGGSCCCC-
T ss_pred HHHHHcCCCCCCCCCccCC
Confidence 9999999999999998874
No 3
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=3.9e-53 Score=377.99 Aligned_cols=321 Identities=40% Similarity=0.719 Sum_probs=277.4
Q ss_pred ccceEEEeCCceeeeEeecChhH------------------HhhHHHHhhcCCceeecCchHHHHHHHHHHhcCC-CCc-
Q 020650 3 QEGILLGMGNPLLDISSVVDDDF------------------LNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQI-PGA- 62 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~------------------~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~-g~~- 62 (323)
+..+|+++|++++|++..+++.+ +|.+++..+.......+||++.|+|.++++|+++ |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 45689999999999999998632 4667888888889999999999999999983221 488
Q ss_pred EEEEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccE
Q 020650 63 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKY 142 (323)
Q Consensus 63 v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (323)
+.++|.+|+|.+|+.+++.|++.||+++++..++.+|+.+++++++|+|+++.+.++...++++++.....++.++++++
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~ 165 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCITGKERTLVADLGAANHLSSEHMRSPAVVRAMDESRI 165 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEETTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEECCceeeeechhhhhcCCHHHcCchhhHHHHhhCCE
Confidence 99999999999999999999999999999877777899999888888999888888888888888876444567899999
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHH
Q 020650 143 FYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 222 (323)
Q Consensus 143 v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~ 222 (323)
+|++|+.+.++++.+.++++.++++++++++|++.+.|.+...+.+..+++++|++++|++|++.+++..+.+.++++++
T Consensus 166 ~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~~ 245 (347)
T 3otx_A 166 FYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEI 245 (347)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHHH
T ss_pred EEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHHH
Confidence 99999988888899999999999999999999998887766778889999999999999999999998877777889999
Q ss_pred HHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHh
Q 020650 223 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 302 (323)
Q Consensus 223 ~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~ 302 (323)
++.+.++.+....+++.++||+|++|++++++++.++++++++++.+++|||||||+|.|||+++|++|+++++|+++|+
T Consensus 246 ~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~a~ 325 (347)
T 3otx_A 246 ARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKDLRRCCETGH 325 (347)
T ss_dssp HHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99884321111468999999999999999998888888876655458899999999999999999999999999999999
Q ss_pred HHHHHHhhhcCccCCCCCCCC
Q 020650 303 YTSHVIIQRSGCTYPEKPEFN 323 (323)
Q Consensus 303 ~~Aa~~~~~~G~~~p~~~~~~ 323 (323)
++|+++|++.|+.+|.+++|.
T Consensus 326 ~~aa~~v~~~G~~~p~~~~~~ 346 (347)
T 3otx_A 326 YTAQEVIQRDGCSFPEKPSFS 346 (347)
T ss_dssp HHHHHHHTCC----CCSCSCC
T ss_pred HHHHHHHcccCCCCCCCCCCC
Confidence 999999999999999998874
No 4
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=1.9e-50 Score=360.34 Aligned_cols=319 Identities=58% Similarity=1.034 Sum_probs=272.1
Q ss_pred cceEEEeCCceeeeEeecChhH------------------HhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCC-CcEE
Q 020650 4 EGILLGMGNPLLDISSVVDDDF------------------LNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIP-GATS 64 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~------------------~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g-~~v~ 64 (323)
+++|+|+|++++|++..+++.. .|.+++.....+....+||++.|+|.++++|.+.+ .++.
T Consensus 6 ~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~ 85 (345)
T 1bx4_A 6 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAAT 85 (345)
T ss_dssp TTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEE
T ss_pred cccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEE
Confidence 4589999999999999988721 67778888888999999999999999999842322 7999
Q ss_pred EEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcc-cCCCcchhhhhccccEE
Q 020650 65 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYF 143 (323)
Q Consensus 65 ~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v 143 (323)
++|.+|+|.+|+.+++.|+++||+++++..++.+|+.+++++++|+|+++.+.++...++++ +++.....+.+++++++
T Consensus 86 ~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~v 165 (345)
T 1bx4_A 86 FFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVC 165 (345)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSEE
T ss_pred EEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEcCCceEeeeccchHhhcCcccccCcHHHHHHHhhCCEE
Confidence 99999999999999999999999999987667789999888887888877777777778887 77643334567899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHH
Q 020650 144 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 223 (323)
Q Consensus 144 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~ 223 (323)
|++++.+.++++.+..+++.+++.+.++++|++.+.|.+...+.++++++++|++++|++|++.+++....+.+++++++
T Consensus 166 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~ 245 (345)
T 1bx4_A 166 YIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIA 245 (345)
T ss_dssp EEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHH
T ss_pred EEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHHH
Confidence 99998877788899999999999999999999887776555666788999999999999999999987665667899999
Q ss_pred HHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhH
Q 020650 224 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 303 (323)
Q Consensus 224 ~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~ 303 (323)
+.+.++.+....+.+.+++|+|++|++++++++.++++++++++.+++|||||||+|.|||+++|++|+++++|+++|++
T Consensus 246 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~~ 325 (345)
T 1bx4_A 246 KKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHY 325 (345)
T ss_dssp HHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 88832100000488999999999999999877888888765544479999999999999999999999999999999999
Q ss_pred HHHHHhhhcCccCCCCCCC
Q 020650 304 TSHVIIQRSGCTYPEKPEF 322 (323)
Q Consensus 304 ~Aa~~~~~~G~~~p~~~~~ 322 (323)
+|+.++++.|+.+|++++|
T Consensus 326 ~aa~~v~~~G~~~p~~~~~ 344 (345)
T 1bx4_A 326 AASIIIRRTGCTFPEKPDF 344 (345)
T ss_dssp HHHHHTTSSSSCCCSSCCC
T ss_pred HHHHHHhccCCCCCCcccC
Confidence 9999999999999998887
No 5
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=1.7e-50 Score=363.75 Aligned_cols=318 Identities=36% Similarity=0.655 Sum_probs=272.5
Q ss_pred eEEEeCCceeeeEeecChhHHh------------------hHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEe
Q 020650 6 ILLGMGNPLLDISSVVDDDFLN------------------KYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 67 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~------------------~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~ 67 (323)
.|++||+..+|++..++..++. .+++.....+....+||++.|+|+++++|.+.+..+.|+|
T Consensus 28 ~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~fiG 107 (372)
T 3uq6_A 28 YVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVG 107 (372)
T ss_dssp CEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEEEE
T ss_pred eEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEEEe
Confidence 5999999999999999864433 2355666667788999999999999999544456699999
Q ss_pred eeecCchhHHHHHHHHHcCceeEEee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEe
Q 020650 68 CIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIA 146 (323)
Q Consensus 68 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 146 (323)
.||+|.+|+.+++.|++.||+++++. .++.+|+.+.+++++++|+++.+.++...+++++++.+..+..++.++++|++
T Consensus 108 ~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~~~~~ 187 (372)
T 3uq6_A 108 CIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYYIA 187 (372)
T ss_dssp EECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEEEE
T ss_pred eecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcCCCceEEEEeccchhhcchhhhhhhhHHHHhhcccEEEEe
Confidence 99999999999999999999999975 46668888888888999999999999999999999876667788999999999
Q ss_pred ccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHH
Q 020650 147 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 226 (323)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l 226 (323)
|+.+...++.+.++++.+++.+.++.+|++.+.+.+..++.+..+++++|++++|++|++.+++..+...++.++.++.+
T Consensus 188 g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~a~~l 267 (372)
T 3uq6_A 188 GFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARYI 267 (372)
T ss_dssp GGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHHHHHH
Confidence 98776667888999999999999999999988877777888999999999999999999999998887777888888887
Q ss_pred hcCCcc-ccCCccEEEEeeCCCceEEeeCCe--eeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhH
Q 020650 227 SQWPKA-SEIRKRTAVITQGADPVVVAQDGK--LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 303 (323)
Q Consensus 227 ~~~~~~-~~~~~~~vvit~G~~G~~~~~~~~--~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~ 303 (323)
.++... ...+.+.+++|+|++|++++++++ ...++.++.+..++||||||||+|.|||+|+|++|+++++|+++|++
T Consensus 268 ~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~l~~a~~~a~~ 347 (372)
T 3uq6_A 268 ADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAAVK 347 (372)
T ss_dssp HHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred hhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 543221 234678899999999999987653 34455444555689999999999999999999999999999999999
Q ss_pred HHHHHhhhcCccCCCCCCCC
Q 020650 304 TSHVIIQRSGCTYPEKPEFN 323 (323)
Q Consensus 304 ~Aa~~~~~~G~~~p~~~~~~ 323 (323)
+|+.+|++.|+++|.+++++
T Consensus 348 aAa~vv~~~Ga~lp~r~~~~ 367 (372)
T 3uq6_A 348 AAAYIICRSGFSLGSRDSYS 367 (372)
T ss_dssp HHHHHHTSSSSCCCCGGGCC
T ss_pred HHHHHHcCCCCCCCChhHHH
Confidence 99999999999999988864
No 6
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=5.8e-48 Score=348.74 Aligned_cols=306 Identities=34% Similarity=0.555 Sum_probs=252.7
Q ss_pred CccceEEEeCCceeeeEeecChhHH----hhHHHHh-------------hcCCceeecCchHHHHHHHHHHhcCCCCcEE
Q 020650 2 AQEGILLGMGNPLLDISSVVDDDFL----NKYDEMA-------------SKYNVEYIAGGATQNSIRVAQWMLQIPGATS 64 (323)
Q Consensus 2 ~~~~~i~viG~~~iD~~~~~~~~~~----~~~~~~~-------------~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~ 64 (323)
+++++|+|+|++++|++..+++.++ |.+++.+ +.......+||++.|+|.+|++|.+.|.++.
T Consensus 30 ~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~ 109 (383)
T 2abs_A 30 TGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAG 109 (383)
T ss_dssp CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEE
T ss_pred CCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEE
Confidence 4467999999999999999876221 2222221 4556788999999999999998543349999
Q ss_pred EEeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEE
Q 020650 65 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 144 (323)
Q Consensus 65 ~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 144 (323)
++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.++...+++++ ...+.+++++++|
T Consensus 110 ~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~l~~~~----~~~~~l~~~~~v~ 185 (383)
T 2abs_A 110 YMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRLPE----DWTTFASGALIFY 185 (383)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEETTEEEEEEECGGGGGCCCCT----THHHHTTTCCEEE
T ss_pred EEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEcCCceeEeeccChhhhCChhh----hhHHHhhcCCEEE
Confidence 999999999999999999999999999876667899999888878888777777766666551 2345678999999
Q ss_pred EeccccccCHHHHHHHHHHHHh-CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCC--------
Q 020650 145 IAGFFLTVSPDSIQLVAEHAAA-NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWE-------- 215 (323)
Q Consensus 145 i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~-------- 215 (323)
++++.+.++++.+..+++.+++ .++++++|++.+.|.+...+.++++++++|++++|++|++.|++..+..
T Consensus 186 ~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~s 265 (383)
T 2abs_A 186 ATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALS 265 (383)
T ss_dssp EEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC--------
T ss_pred EeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccccccccc
Confidence 9998877788899999999998 8999999999877765556677889999999999999999998865432
Q ss_pred ----CCCHHHHHHHHhcCCcccc------C-CccEEEEeeCCCceEEe-----eCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 216 ----TDDVEEIALKLSQWPKASE------I-RKRTAVITQGADPVVVA-----QDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 216 ----~~~~~~~~~~l~~~~~~~~------~-~~~~vvit~G~~G~~~~-----~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
.++++++++.+ .. . +.+.++||+|++|++++ ++++.++++++++++.+++||+||||+
T Consensus 266 ~~~~~~~~~~~a~~l------~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDa 339 (383)
T 2abs_A 266 TANKEHAVEVCTGAL------RLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDA 339 (383)
T ss_dssp --CHHHHHHHHHHHH------HHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHH
T ss_pred cccccccHHHHHHHH------HhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHH
Confidence 23456777777 33 3 78999999999999998 555677777654444478999999999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCC
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p 317 (323)
|.|||+++|++|+++++|+++|+++|+++|++.|+.+|
T Consensus 340 F~ag~~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga~~p 377 (383)
T 2abs_A 340 FVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLS 377 (383)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCccCC
Confidence 99999999999999999999999999999999999866
No 7
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=3e-49 Score=346.69 Aligned_cols=292 Identities=21% Similarity=0.272 Sum_probs=253.1
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHh-hcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMA-SKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~-~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
++|+|+|++++|++..+++ +|.+++.. +.......+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|+
T Consensus 3 ~~v~viG~~~~D~~~~~~~--~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~-lG--~~~~~~~~vG~D~~g~~i~~~l~ 77 (304)
T 3ry7_A 3 NKVVILGSTNVDQFLTVER--YAQPGETLHVEEAQKAFGGGKGANQAIATAR-MQ--ADTTFITKIGTDGVADFILEDFK 77 (304)
T ss_dssp CEEEEECCCEEEEEEECSS--CCCTTCCCCCSSCCEEEEECHHHHHHHHHHH-TT--CEEEEECEEESSCTTHHHHHHHH
T ss_pred CcEEEEccceeEEEEeccC--CCCCCCceecccceeecCCCHHHHHHHHHHH-CC--CCeEEEEEeCCChHHHHHHHHHH
Confidence 5899999999999999998 77777777 7788899999999999999998 56 99999999999999999999999
Q ss_pred HcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHH
Q 020650 84 LAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVA 161 (323)
Q Consensus 84 ~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~ 161 (323)
++||+++++. .++.+|+.+++.++ +|+++++.+.++...+++++++. ..+.+++++++++++ ..+.+.+..++
T Consensus 78 ~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~~~~~~~v~~~~---~~~~~~~~~~~ 152 (304)
T 3ry7_A 78 VAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVIN--AKDAIINADFVVAQL---EVPIPAIISAF 152 (304)
T ss_dssp HTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHT--THHHHHTCSEEEEET---TSCHHHHHHHH
T ss_pred HcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHH--HHHHhccCCEEEEcC---CCCHHHHHHHH
Confidence 9999999985 57788999998887 68888887888777788777654 345688999999975 45678899999
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEE
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAV 241 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vv 241 (323)
+.+++++.++++|+.... +....+++++|++++|++|++.+++....+.++++++++.+ .+.+.+.++
T Consensus 153 ~~a~~~~~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~~vv 220 (304)
T 3ry7_A 153 EIAKAHGVTTVLNPAPAK------ALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYF------LSIGIKTVL 220 (304)
T ss_dssp HHHHHTTCEEEEECCSCC------CCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHH------HHTTCCEEE
T ss_pred HHHHHcCCEEEEeCCccc------cccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHH------HHcCCCEEE
Confidence 999999999999997531 22457889999999999999999886443334677888888 667899999
Q ss_pred EeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC-CCHHHHHHHHhHHHHHHhhhcCcc--CCC
Q 020650 242 ITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE-KPIEECVRAGCYTSHVIIQRSGCT--YPE 318 (323)
Q Consensus 242 it~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g-~~~~~a~~~A~~~Aa~~~~~~G~~--~p~ 318 (323)
+|+|++|++++++++.++++++++ +++||+||||+|.|+|+++|++| +++++|+++|+++|++++++.|+. .|+
T Consensus 221 vt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~~~aa~~~~~~G~~~~~p~ 297 (304)
T 3ry7_A 221 ITLGKQGTYFATKNQSQHIEAYKV---NAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPL 297 (304)
T ss_dssp EECGGGCEEEECSSCEEEECCSSC---CSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHHHHHHTTSCCCCTGGGCCC
T ss_pred EEeCCCceEEEECCeeEEecCCCc---ccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCccccCCC
Confidence 999999999998888888887544 78999999999999999999999 999999999999999999999994 577
Q ss_pred CCC
Q 020650 319 KPE 321 (323)
Q Consensus 319 ~~~ 321 (323)
++|
T Consensus 298 ~~e 300 (304)
T 3ry7_A 298 LEE 300 (304)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 8
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=8.8e-47 Score=336.92 Aligned_cols=294 Identities=25% Similarity=0.396 Sum_probs=250.7
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHH----H------------HhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEe
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYD----E------------MASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 67 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~----~------------~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~ 67 (323)
+++|+|+|++++|++..++..++++.+ . ..........+||++.|+|.++++ +| .++.++|
T Consensus 25 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~-LG--~~~~~ig 101 (352)
T 4e3a_A 25 RFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVAN-LG--GKAAYFG 101 (352)
T ss_dssp SEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHH-HT--CCEEEEC
T ss_pred cccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHH-cC--CCeEEEE
Confidence 469999999999999999985543321 0 111234467999999999999998 66 9999999
Q ss_pred eeecCchhHHHHHHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEE
Q 020650 68 CIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYI 145 (323)
Q Consensus 68 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 145 (323)
.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|++..+.++...++++++.. +.+++++++|+
T Consensus 102 ~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~----~~~~~~~~v~~ 177 (352)
T 4e3a_A 102 NVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEA----DVVADAKVTYF 177 (352)
T ss_dssp CCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCH----HHHHTEEEEEE
T ss_pred EECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCH----HHHhhCCEEEE
Confidence 99999999999999999999999986 46678999998887 79999888888888888888763 66889999999
Q ss_pred ecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHHHHHhhcCCCCCCHHH
Q 020650 146 AGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSKVQGWETDDVEE 221 (323)
Q Consensus 146 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~~l~~~~~~~~~~~~~ 221 (323)
+|+.+ ..+.+.+.++++.+++.+.++++|++.+.+.+...+.+.++++ ++|++++|++|++.+++ .+++++
T Consensus 178 ~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g-----~~~~~~ 252 (352)
T 4e3a_A 178 EGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQ-----TDDFEE 252 (352)
T ss_dssp EGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTT-----CSCHHH
T ss_pred eeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhC-----CCCHHH
Confidence 99863 2345788999999999999999999887666666777888998 89999999999999987 357888
Q ss_pred HHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHH
Q 020650 222 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 301 (323)
Q Consensus 222 ~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A 301 (323)
+++.+ .. +.+.++||+|++|++++++++.+++++++++ +++|||||||+|.|||+++|.+|+++++|+++|
T Consensus 253 a~~~l------~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~A 323 (352)
T 4e3a_A 253 ALNRI------AA-DCKIAAVTMSENGAVILKGRERYYVNAIRIR--EVVDTTGAGDLFASGFLYGYTQGRSLEDCGKLG 323 (352)
T ss_dssp HHHHH------HH-HSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHH------hc-CCCEEEEEECCCceEEEECCEEEEECCccCC--CCcCCCChHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 88877 33 5789999999999999999998888875441 489999999999999999999999999999999
Q ss_pred hHHHHHHhhhcCccCCC
Q 020650 302 CYTSHVIIQRSGCTYPE 318 (323)
Q Consensus 302 ~~~Aa~~~~~~G~~~p~ 318 (323)
+++|+++|++.|+.+|.
T Consensus 324 ~~aAa~~v~~~G~~~~~ 340 (352)
T 4e3a_A 324 CLAAGIVIQQIGPRPMT 340 (352)
T ss_dssp HHHHHHHTTSSSSSCSS
T ss_pred HHHHHHHHcCCCCCCCc
Confidence 99999999999997543
No 9
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=6.4e-48 Score=339.00 Aligned_cols=296 Identities=23% Similarity=0.321 Sum_probs=248.3
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++..+++ +|.+++..........+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++
T Consensus 1 m~~~~~v~viG~~~iD~~~~~~~--~p~~g~~~~~~~~~~~~GG~~~N~A~~la~-lG--~~~~~~~~vG~D~~g~~i~~ 75 (309)
T 1rkd_A 1 MQNAGSLVVLGSINADHILNLQS--FPTPGETVTGNHYQVAFGGKGANQAVAAGR-SG--ANIAFIACTGDDSIGESVRQ 75 (309)
T ss_dssp ---CCEEEEECCCEEEEEEECSS--CCCTTCCCCCCCEEEEEECHHHHHHHHHHH-HT--CEEEEEEEEESSTTHHHHHH
T ss_pred CCCCCeEEEECcceEeEEEecCC--CCCCCCeeecCceeecCCCHHHHHHHHHHh-CC--CceEEEEEECCCHHHHHHHH
Confidence 77677999999999999999988 777777777778889999999999999998 66 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHH
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQ 158 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 158 (323)
.|+++||+++++. .++.+|+.++++++ +|+|+++.+.+++..+++++++. ..+.++.++++++++ ..+.+.+.
T Consensus 76 ~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~v~~~~---~~~~~~~~ 150 (309)
T 1rkd_A 76 QLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEA--QRERIANASALLMQL---ESPLESVM 150 (309)
T ss_dssp HHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHT--THHHHHHCSEEEECS---SSCHHHHH
T ss_pred HHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHH--HHHhcccCCEEEEeC---CCCHHHHH
Confidence 9999999999986 46778999998887 58888877777776777766643 335678899999975 34668888
Q ss_pred HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCcc
Q 020650 159 LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 238 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 238 (323)
.+++.+++.+.++++|+.... +....+++++|++++|++|++.+++....+.++++++++.+ .+.+.+
T Consensus 151 ~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~ 218 (309)
T 1rkd_A 151 AAAKIAHQNKTIVALNPAPAR------ELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVL------HEKGIR 218 (309)
T ss_dssp HHHHHHHHTTCEEEECCCSCC------CCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHH------HHTTCS
T ss_pred HHHHHHHHcCCEEEEECCccc------cchHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHH------HHhCCC
Confidence 999999999999999997531 11246789999999999999999875332224566777887 567889
Q ss_pred EEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc--C
Q 020650 239 TAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT--Y 316 (323)
Q Consensus 239 ~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~--~ 316 (323)
.+++|+|++|++++++++.+++++++ ++++||+||||+|.|+|+++|++|+++++|+++|+++|++++++.|+. +
T Consensus 219 ~vvvt~G~~G~~~~~~~~~~~~~~~~---v~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~~G~~~~~ 295 (309)
T 1rkd_A 219 TVLITLGSRGVWASVNGEGQRVPGFR---VQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSV 295 (309)
T ss_dssp EEEEECGGGCEEEEETTEEEEECCCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSGGGC
T ss_pred EEEEEECCCcEEEEeCCceEEcCCCC---CCcCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCccCCC
Confidence 99999999999999888888887654 378999999999999999999999999999999999999999999984 6
Q ss_pred CCCCC
Q 020650 317 PEKPE 321 (323)
Q Consensus 317 p~~~~ 321 (323)
|+++|
T Consensus 296 p~~~e 300 (309)
T 1rkd_A 296 PWREE 300 (309)
T ss_dssp CCHHH
T ss_pred CCHHH
Confidence 77654
No 10
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=2.8e-47 Score=336.30 Aligned_cols=292 Identities=21% Similarity=0.304 Sum_probs=233.7
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCC--CCcEEEEeeeecCchhHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQI--PGATSYIGCIGKDKFGEEM 78 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~--g~~v~~~~~vG~D~~g~~i 78 (323)
|+|+++|+|+|++++|++...+ .....+||++.|+|.++++ +|. +.++.++|.+|+|.+|+.+
T Consensus 1 m~m~~~i~viG~~~~D~~~~~~--------------~~~~~~GG~~~NvA~~la~-LG~~~~~~~~~ig~vG~D~~G~~l 65 (319)
T 3lhx_A 1 MSLSKKIAVIGECMIELSEKGA--------------DVKRGFGGDTLNTSVYIAR-QVDPAALTVHYVTALGTDSFSQQM 65 (319)
T ss_dssp ---CEEEEEESCCEEEEEC-----------------CCEEEEECHHHHHHHHHHT-TSCTTTEEEEEECEECSSHHHHHH
T ss_pred CCccCceeeechhhhhhccCCC--------------ceEEecCChHHHHHHHHHH-cCCCCCCcEEEEEEeCCCHHHHHH
Confidence 8888899999999999986432 3678999999999999997 331 1799999999999999999
Q ss_pred HHHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeeccccc---ccCCcccCCCcchhhhhccccEEEEeccccc-c
Q 020650 79 KKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAA---NCYKSEHLKKPENWALVEKAKYFYIAGFFLT-V 152 (323)
Q Consensus 79 ~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~-~ 152 (323)
++.|++.||+++++. .++.+|+.+++.++ +|+|+++.+.+.. ..+++++++ ...+.++++|++|++++.+. +
T Consensus 66 ~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~~~g~~~~~l 143 (319)
T 3lhx_A 66 LDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSA--AICEELANFDYLYLSGISLAIL 143 (319)
T ss_dssp HHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHH--HHHHHHTTCSEEEEEHHHHHTS
T ss_pred HHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchh--hHHHHhcCCCEEEEcCchhhhc
Confidence 999999999999985 46678999988876 7888887665432 233333332 23466889999999987653 2
Q ss_pred C---HHHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHH
Q 020650 153 S---PDSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 225 (323)
Q Consensus 153 ~---~~~~~~~~~~~~~~~~~~~~d~~~--~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~ 225 (323)
+ .+.+.++++.+++.+.++++|+.. ..|. +...+.++.+++.+|++++|.+|++.+++ .++++++++.
T Consensus 144 ~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g-----~~~~~~~~~~ 218 (319)
T 3lhx_A 144 SPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWG-----QQPVEDVIAR 218 (319)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHC-----CCCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhC-----CCCHHHHHHH
Confidence 3 367889999999999999999963 2231 23456678899999999999999999987 3578888998
Q ss_pred HhcCCccccCCccEEEEeeCCCceEEeeCCeee-EEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHH
Q 020650 226 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLK-KFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 304 (323)
Q Consensus 226 l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~-~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~ 304 (323)
+ .+.|++.++||+|++|++++++++.+ +++++++++++++||+||||+|.|+|+++|++|+++++|+++|+++
T Consensus 219 l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 292 (319)
T 3lhx_A 219 T------HNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLT 292 (319)
T ss_dssp H------HHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred H------HhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 8 66789999999999999999877654 7777544456899999999999999999999999999999999999
Q ss_pred HHHHhhhcCccCCCCC
Q 020650 305 SHVIIQRSGCTYPEKP 320 (323)
Q Consensus 305 Aa~~~~~~G~~~p~~~ 320 (323)
|+.++++.|+.+|...
T Consensus 293 aa~~v~~~Ga~~~~~~ 308 (319)
T 3lhx_A 293 ASTVIQYRGAIIPREA 308 (319)
T ss_dssp HHHHTTSSSSSCCGGG
T ss_pred HHhhhccCCCcCCCCC
Confidence 9999999999877653
No 11
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=1e-47 Score=340.60 Aligned_cols=298 Identities=24% Similarity=0.300 Sum_probs=248.2
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+.+++|+|+|++++|++..+++ +|.+++..........+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 21 m~~~~~vlviG~~~iD~~~~~~~--~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~G~~l~~ 95 (331)
T 2fv7_A 21 QEEVAAVVVVGSCMTDLVSLTSR--LPKTGETIHGHKFFIGFGGKGANQCVQAAR-LG--AMTSMVCKVGKDSFGNDYIE 95 (331)
T ss_dssp ---CCSEEEECCCEEEEEEECSS--CCCTTCCCCCSEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEEESSHHHHHHHH
T ss_pred ccccCCEEEECcccEEEEEecCC--CCCCCceEecCceEECcCCHHHHHHHHHHH-CC--CCeEEEEEECCChhHHHHHH
Confidence 66667999999999999999988 777777777777889999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHH
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQ 158 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 158 (323)
.|++.||+++++. .++.+|+.++++++ +|+|+++.+.+++..++++++.. ..+.++.++++++++ ..+.+.+.
T Consensus 96 ~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~--~~~~l~~~~~v~~~~---~~~~~~~~ 170 (331)
T 2fv7_A 96 NLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRA--AANVISRAKVMVCQL---EITPATSL 170 (331)
T ss_dssp HHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHH--THHHHHHCSEEEECS---SSCHHHHH
T ss_pred HHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHH--HHHhhccCCEEEEec---CCCHHHHH
Confidence 9999999999986 46778999998887 58888877777766677666542 234578899999975 34568888
Q ss_pred HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCcc
Q 020650 159 LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 238 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 238 (323)
.+++.+++.+.++++|+.... ....+.+++++|++++|++|++.+++....+.++++++++.+ .+.+++
T Consensus 171 ~~~~~a~~~g~~v~~Dp~~~~-----~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l------~~~g~~ 239 (331)
T 2fv7_A 171 EALTMARRSGVKTLFNPAPAI-----ADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVL------LKRGCQ 239 (331)
T ss_dssp HHHHHHHHTTCEEEECCCSCC-----TTCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHH------HTTTCS
T ss_pred HHHHHHHHcCCEEEEeCCccc-----ccchHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHH------HHcCCC
Confidence 999999999999999997531 111335778999999999999999875433334567778888 667899
Q ss_pred EEEEeeCCCceEEeeCC--eeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC--CCHHHHHHHHhHHHHHHhhhcCc
Q 020650 239 TAVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE--KPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 239 ~vvit~G~~G~~~~~~~--~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g--~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
.+++|+|++|+++++++ +.+++++++ ++++||+||||+|.|+|+++|++| +++++|+++|+++|+.++++.|+
T Consensus 240 ~VvvT~G~~G~~~~~~~~~~~~~~~~~~---v~vvdttGAGDaf~a~~~~~l~~g~~~~~~~a~~~A~~~aa~~v~~~G~ 316 (331)
T 2fv7_A 240 VVIITLGAEGCVVLSQTEPEPKHIPTEK---VKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGT 316 (331)
T ss_dssp EEEEECGGGCEEEEESSCCSCEEECCCC---CCCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHTSSSG
T ss_pred EEEEEECCCceEEEECCCCceeEecCCC---CccCCCCCchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999998877 677777644 478999999999999999999999 99999999999999999999998
Q ss_pred --cCCCCCCC
Q 020650 315 --TYPEKPEF 322 (323)
Q Consensus 315 --~~p~~~~~ 322 (323)
.+|+.+|+
T Consensus 317 ~~~~p~~~ev 326 (331)
T 2fv7_A 317 QSSYPYKKDL 326 (331)
T ss_dssp GGGCCCGGGS
T ss_pred ccCCCCHHHH
Confidence 56887765
No 12
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=1.7e-46 Score=333.39 Aligned_cols=294 Identities=18% Similarity=0.255 Sum_probs=233.6
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++...+ +...+.......+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 23 m~~~~~vlviG~~~iD~~~~~~-------g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~G~~i~~ 92 (336)
T 4du5_A 23 MTSALDVITFGEAMMLLVADRP-------GPLEHAEAFHKRTAGAETNVAIGLAR-LG--LKVGWASRLGTDSMGRYLLA 92 (336)
T ss_dssp ---CEEEEEECCCEEEEEESSS-------SCGGGCCEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEECSSHHHHHHHH
T ss_pred cCCCCCEEEEChhhhhccCCCC-------CccchhhheeecCCCHHHHHHHHHHh-CC--CcEEEEEEeCCCHHHHHHHH
Confidence 5566799999999999997653 35666777889999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceee---cccccccCCcccCCCcchhhhhccccEEEEeccccccCH-
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVA---NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP- 154 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~- 154 (323)
.|++.||+++++. .++.+|+.+++..+ +|+++.+. ..++...++++++.. +.++++++++++|+.+..++
T Consensus 93 ~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~----~~l~~~~~v~~~g~~~~~~~~ 168 (336)
T 4du5_A 93 AMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE----AWLLSARHLHATGVFPAISAT 168 (336)
T ss_dssp HHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH----HHHTTEEEEEEESSGGGSCTT
T ss_pred HHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH----hHhccCCEEEEcCchhhCChH
Confidence 9999999999985 56678999888876 67555432 235666777777753 56789999999997654443
Q ss_pred --HHHHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhc
Q 020650 155 --DSIQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQ 228 (323)
Q Consensus 155 --~~~~~~~~~~~~~~~~~~~d~~--~~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~ 228 (323)
+.+..+++.+++.+.++++|+. +..|. ....+.++++++.+|++++|++|++.+++ .++++++++.+
T Consensus 169 ~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g-----~~~~~~~~~~l-- 241 (336)
T 4du5_A 169 TLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTG-----ETTPEGVARFY-- 241 (336)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHC-----CCSHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhC-----CCCHHHHHHHH--
Confidence 5677889999999999999996 22332 22356678899999999999999999987 35788888888
Q ss_pred CCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCc-ccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHH
Q 020650 229 WPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDK-LVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHV 307 (323)
Q Consensus 229 ~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~-~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~ 307 (323)
.+.+.+.+++|+|++|++++++++.++++++++ + ++||+||||+|.|+|+++|++|+++++|+++|+++|++
T Consensus 242 ----~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~A~~~aa~ 314 (336)
T 4du5_A 242 ----RQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPV---AEVVDTVGAGDGFAVGVISALLDGLGVPEAVKRGAWIGAR 314 (336)
T ss_dssp ----HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC----------CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ----HhcCCCEEEEEecCCceEEEECCeEEEeCCccC---CCCCCCccchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 667899999999999999999888888887544 5 89999999999999999999999999999999999999
Q ss_pred HhhhcCcc--CCCCCCC
Q 020650 308 IIQRSGCT--YPEKPEF 322 (323)
Q Consensus 308 ~~~~~G~~--~p~~~~~ 322 (323)
+|++.|+. +|+++|+
T Consensus 315 ~v~~~G~~~~~p~~~ev 331 (336)
T 4du5_A 315 AVQVLGDSEGLPTRAEL 331 (336)
T ss_dssp HHC------CCCCHHHH
T ss_pred HhccCCCccCCCCHHHH
Confidence 99999984 8877653
No 13
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=6.6e-47 Score=336.57 Aligned_cols=285 Identities=18% Similarity=0.181 Sum_probs=243.5
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
+++|+|+|++++|++..+++ +|.++...+.......+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|+
T Consensus 29 ~~~i~viG~~~iD~~~~~~~--~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~G~~i~~~L~ 103 (343)
T 2rbc_A 29 GKHVLCVGAAVLDTLFRVAD--MPKGEGKVLPYEVLQIAEGMASSAAYAVHR-MG--GRASLWGAVGDDETGTRILRDLS 103 (343)
T ss_dssp CCEEEEESCCEEEEEEECSS--CCCSSSCCCCSEEEEEEECHHHHHHHHHHH-TT--CEEEEECEEESSHHHHHHHHHHH
T ss_pred CCeEEEECcceEEEEeecCC--CCCCCCeEeeeeeEEcCCcHHHHHHHHHHH-cC--CceEEEEEeCCCHHHHHHHHHHH
Confidence 46899999999999999987 666666667777889999999999999998 56 99999999999999999999999
Q ss_pred HcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHH
Q 020650 84 LAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVA 161 (323)
Q Consensus 84 ~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~ 161 (323)
++||+++++. .++.+|+.++++++ +|+|+++.+.+++..++++++. .+.+.+++++|++++. ++.+..++
T Consensus 104 ~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~----~~~l~~~~~v~~~~~~----~~~~~~~~ 175 (343)
T 2rbc_A 104 ESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACT----PEDIALFDAVLVDVRW----PELALDVL 175 (343)
T ss_dssp HTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCC----HHHHTTCSEEEECSSS----HHHHHHHH
T ss_pred HcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhc----HhhhCCCCEEEEcCCC----HHHHHHHH
Confidence 9999999985 46678999988887 6888887676766566666554 2457899999998753 46788899
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHh-hcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCc-cE
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEK-VLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK-RT 239 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~ 239 (323)
+.+++.+.++++|+... .+.+.+ +++++|++++|++|++.+++ .++++++++.+ .+.++ +.
T Consensus 176 ~~a~~~g~~v~~Dp~~~------~~~~~~~ll~~~dil~~N~~Ea~~l~g-----~~~~~~~~~~l------~~~g~~~~ 238 (343)
T 2rbc_A 176 TVARALGKPAILDGDVA------PVETLEGLAPAATHIVFSEPAATRLTG-----LETVKDMLPVL------HARYPQTF 238 (343)
T ss_dssp HHHHHTTCCEEEEECSC------CHHHHHHHGGGCSEEEEEHHHHHHHHC-----CSSHHHHHHHH------HHHSTTSE
T ss_pred HHHHHCCCEEEEECCcc------ccccHHHHHhcCCEEEeCHHHHHHHcC-----CCCHHHHHHHH------HHhCCCce
Confidence 99999999999999652 234666 89999999999999999987 34788888888 66788 99
Q ss_pred EEEeeCCCceEEeeCC--eeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc--
Q 020650 240 AVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT-- 315 (323)
Q Consensus 240 vvit~G~~G~~~~~~~--~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~-- 315 (323)
+++|+|++|+++++++ +.+++++++ ++++||+||||+|.|+|+++|++|+++++|+++|+++|++++++.|+.
T Consensus 239 VvvT~G~~G~~~~~~~~~~~~~~~~~~---v~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~ 315 (343)
T 2rbc_A 239 IAVTAGPAGCWWTEADDPTVHFQTTMQ---VEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIG 315 (343)
T ss_dssp EEEECGGGCEEEECTTCCCEEEECCCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSGGGG
T ss_pred EEEEECCcceEEEeCCCceeEEecCCC---CccccCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCccC
Confidence 9999999999998777 777877654 379999999999999999999999999999999999999999999985
Q ss_pred CCCCCC
Q 020650 316 YPEKPE 321 (323)
Q Consensus 316 ~p~~~~ 321 (323)
+|+++|
T Consensus 316 ~p~~~e 321 (343)
T 2rbc_A 316 APTREE 321 (343)
T ss_dssp CCCHHH
T ss_pred CCCHHH
Confidence 677654
No 14
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=3.8e-47 Score=336.66 Aligned_cols=291 Identities=18% Similarity=0.245 Sum_probs=241.1
Q ss_pred CccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHH
Q 020650 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKN 81 (323)
Q Consensus 2 ~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~ 81 (323)
..+++|+|+|++++|++..+++ .|.++..... .....+||++.|+|.+|++ +| .++.++|.+|+|..|+.+++.
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~~--~~~~g~~~~~-~~~~~~GG~~~NvA~~la~-LG--~~v~~i~~vG~D~~g~~i~~~ 77 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSKA--SYRPYNSTPG-HVKISFGGVCRNIAENMAR-VG--VNTNFMSILGNDEHGKSIVEH 77 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEESS--CCCTTSEEEE-EEEEEEECHHHHHHHHHHH-TT--CCEEEECEECSSHHHHHHHHH
T ss_pred CCCCcEEEECcEEeeeeeccCC--CCCCCCCceE-EEEEccCcHHHHHHHHHHH-cC--CCcEEEEEecCcHHHHHHHHH
Confidence 3467999999999999999988 6666665555 6788999999999999998 56 999999999999999999999
Q ss_pred HHHcCceeEEee-cCCCCceeEEEEEe-CCcccee-ecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHH
Q 020650 82 SKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLV-ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQ 158 (323)
Q Consensus 82 l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 158 (323)
|++.||+++++. .++.+|+.++++++ +|+|.+. ...+....++++.+.. ..+.+..++++++++.. + +.+.
T Consensus 78 L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~-~~~~ 151 (328)
T 3kzh_A 78 SKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDS--KREIFENAEYTVLDSDN---P-EIME 151 (328)
T ss_dssp HHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHH--THHHHHTCSEEEEESSC---H-HHHH
T ss_pred HHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHH--HHHhhccCCEEEEeCCc---H-HHHH
Confidence 999999999874 56778999998887 6888763 3344444555554432 34568899999998742 2 6777
Q ss_pred HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCcc
Q 020650 159 LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 238 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 238 (323)
.+++ +++.+.++++|+.+.. ..+.++.+++.+|++++|++|++.+++....+.++++++++.+ .+.+++
T Consensus 152 ~l~~-a~~~~~~v~~D~~~~~----~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~ 220 (328)
T 3kzh_A 152 YLLK-NFKDKTNFILDPVSAE----KASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYF------LGLGIK 220 (328)
T ss_dssp HHHH-HHTTTSEEEEECCSHH----HHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHH------HHHTCC
T ss_pred HHHH-HhhcCCcEEEEeCCHH----HHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHH------HHhCCC
Confidence 7777 8888999999997644 2344667889999999999999999985544345677788888 667899
Q ss_pred EEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCC
Q 020650 239 TAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPE 318 (323)
Q Consensus 239 ~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~ 318 (323)
.+++|+|++|++++++++.+++|++++ +++|||||||+|.|||+++|++|+++++|+++|+++|+++|++.|+..|.
T Consensus 221 ~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~ 297 (328)
T 3kzh_A 221 KVFISLDADGIFYNDGVSCGKIKATEV---DVKNVTGAGDSFVAGLGYGYMNKMPIEDIVKFAMTMSNITISHEETIHPD 297 (328)
T ss_dssp EEEEECGGGCEEEECSSCEEEEEESSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCTT
T ss_pred EEEEEeCCCCEEEEeCCceEEecCCCc---ccCCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 999999999999998888888886544 79999999999999999999999999999999999999999999996543
No 15
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=2.2e-47 Score=339.55 Aligned_cols=295 Identities=24% Similarity=0.260 Sum_probs=230.1
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++...++ .|.. .......+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 1 M~~~~~v~viG~~~iD~~~~~~~--~~~~-----~~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~g~~l~~ 70 (338)
T 3ljs_A 1 MSLKKTILCFGEALIDMLAQPLV--KKGM-----PRAFLQCAGGAPANVAVAVAR-LG--GAVQFVGMLGSDMFGDFLFD 70 (338)
T ss_dssp ---CCEEEEESCCEEEEEECCCS--STTS-----CCCEEEEEECHHHHHHHHHHH-HT--CCEEEESEEESSHHHHHHHH
T ss_pred CCCCCCEEEEChhhhheeccCCC--Cccc-----hhceeecCCChHHHHHHHHHh-CC--CCEEEEeeccCCHHHHHHHH
Confidence 89999999999999999998877 4432 567888999999999999998 66 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEeccccc--cCH
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSP 154 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~ 154 (323)
.|+++||+++++. .++.+|+.+++.++ +|+|++..+. +++..++++++.. +.+++++++|++++.+. .+.
T Consensus 71 ~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~ 146 (338)
T 3ljs_A 71 SFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQD----ASFSDALIFHACSNSMTDADIA 146 (338)
T ss_dssp HHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCH----HHHHTEEEEEEEGGGGSSHHHH
T ss_pred HHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCH----hHhcCCCEEEECChHhcCchHH
Confidence 9999999999985 47778999998886 6888765543 5556677777763 46789999999987532 234
Q ss_pred HHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 155 DSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~~--~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
+.+..+++.+++.+.++++|+.. ..|. ....+.++.+++.+|++++|++|++.+++.... +.+++++.+
T Consensus 147 ~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~---~~~~~~~~l---- 219 (338)
T 3ljs_A 147 EVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAA---DANAVIQQL---- 219 (338)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTS---CHHHHHHHH----
T ss_pred HHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCCh---hHHHHHHHH----
Confidence 77889999999999999999842 2221 113556788899999999999999999885422 223477888
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC--------------CCHHH
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE--------------KPIEE 296 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g--------------~~~~~ 296 (323)
.+.+++.++||+|++|++++++++.++++++++ +++|||||||+|.|||+++|++| +++++
T Consensus 220 --~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~l~~ 294 (338)
T 3ljs_A 220 --WQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRV---QVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVS 294 (338)
T ss_dssp --TTTTCCEEEEEETTEEEEEEESSCEEEECC--------------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHHHHH
T ss_pred --HhcCCCEEEEeeCCCceEEEECCceEEeCCCCC---ccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHHHHH
Confidence 667899999999999999999888888887554 79999999999999999999999 89999
Q ss_pred HHHHHhHHHHHHhhhcCcc--CCCCCC
Q 020650 297 CVRAGCYTSHVIIQRSGCT--YPEKPE 321 (323)
Q Consensus 297 a~~~A~~~Aa~~~~~~G~~--~p~~~~ 321 (323)
|+++|+++|+++|++.|+. +|+++|
T Consensus 295 al~~A~~~aa~~v~~~Ga~~~~p~~~e 321 (338)
T 3ljs_A 295 TLRFAAAVGALAVTRQGAFTAMPMLSE 321 (338)
T ss_dssp HHHHHHHHHGGGC----CCCCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence 9999999999999999984 576554
No 16
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=4.5e-47 Score=333.17 Aligned_cols=276 Identities=19% Similarity=0.231 Sum_probs=237.8
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+|+++|+|+|++++|++..+++ +|.+++..........+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 16 ~~mm~~i~viG~~~iD~~~~v~~--~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~g~~i~~ 90 (310)
T 3go6_A 16 GPMAPRVCVVGSVNMDLTFVVDA--LPRPGETVLAASLTRTPGGKGANQAVAAAR-AG--AQVQFSGAFGDDPAAAQLRA 90 (310)
T ss_dssp ---CCEEEEECCCEEEEEEECSS--CCCTTCCCCCSEEEEEEECHHHHHHHHHHH-TT--CEEEEECEECSSHHHHHHHH
T ss_pred ccccCCEEEECCceEEEEEecCC--CCCCCCeEEecceeecCCCHHHHHHHHHHH-CC--CCeEEEEEECCCHHHHHHHH
Confidence 45677999999999999999988 777788888888899999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHH
Q 020650 81 NSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQL 159 (323)
Q Consensus 81 ~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 159 (323)
.|+++||+++++...+.+|+.+++.++ +|+|+++.+.++...++ ++ .+.+++++++++++ ..+.+.+..
T Consensus 91 ~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-----~~~l~~~~~v~~~~---~~~~~~~~~ 160 (310)
T 3go6_A 91 HLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-----PSAVANCDVLLTQL---EIPVATALA 160 (310)
T ss_dssp HHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-----TTTTTTCSEEEECS---SSCHHHHHH
T ss_pred HHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-----HHHhhcCCEEEECC---CCCHHHHHH
Confidence 999999999998766678999999887 68998888777766665 22 35578999999986 356788999
Q ss_pred HHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccE
Q 020650 160 VAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRT 239 (323)
Q Consensus 160 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 239 (323)
+++.+++.+.++++|+.+..+ ..+.++.+++.+|++++|++|++.+++. .+.
T Consensus 161 ~~~~a~~~g~~v~~D~~~~~~---~~~~~~~ll~~~dil~~N~~Ea~~l~g~-------------------------~~~ 212 (310)
T 3go6_A 161 AARAAQSADAVVMVNASPAGQ---DRSSLQDLAAIADVVIANEHEANDWPSP-------------------------PTH 212 (310)
T ss_dssp HHHHHHHTTCEEEEECCSSSC---CHHHHHHHHHHCSEEEEEHHHHHHSSSC-------------------------CSE
T ss_pred HHHHHHHcCCEEEEcCCcccc---chHHHHHHHhhCCEEEeCHHHHHHHhCC-------------------------CCE
Confidence 999999999999999986542 3455778899999999999999887541 467
Q ss_pred EEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhc----CCCHHHHHHHHhHHHHHHhhhcCc-
Q 020650 240 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ----EKPIEECVRAGCYTSHVIIQRSGC- 314 (323)
Q Consensus 240 vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~----g~~~~~a~~~A~~~Aa~~~~~~G~- 314 (323)
+++|+|++|++++++++.++++++++ +++||+||||+|.|||+++|++ |+++++|+++|+++|+++|++.|+
T Consensus 213 vvvt~G~~Ga~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~~A~~~aa~~v~~~G~~ 289 (310)
T 3go6_A 213 FVITLGVRGARYVGADGVFEVPAPTV---TPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVG 289 (310)
T ss_dssp EEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHHHHTTSSCST
T ss_pred EEEEECCCCEEEEECCceEEeCCCCC---CcCcCCCchHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999888888887544 7899999999999999999999 999999999999999999999999
Q ss_pred -cCCCCCCC
Q 020650 315 -TYPEKPEF 322 (323)
Q Consensus 315 -~~p~~~~~ 322 (323)
.+|+++|+
T Consensus 290 ~~~p~~~ev 298 (310)
T 3go6_A 290 DCAPAAAAI 298 (310)
T ss_dssp TCCCCHHHH
T ss_pred CCCCCHHHH
Confidence 56776653
No 17
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=2.5e-45 Score=324.66 Aligned_cols=289 Identities=18% Similarity=0.248 Sum_probs=236.2
Q ss_pred ccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHH
Q 020650 3 QEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNS 82 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l 82 (323)
++++|+|+|++++|++..... ......+||++.|+|.+|++ +|.|.++.++|.+|+|.+|+.+++.|
T Consensus 22 ~m~~i~viG~~~iD~~~~~~~------------~~~~~~~GG~~~NvA~~la~-Lg~G~~~~~ig~vG~D~~G~~l~~~L 88 (328)
T 4e69_A 22 SMMHILSIGECMAELAPADLP------------GTYRLGFAGDTFNTAWYLAR-LRPESRISYFSAIGDDALSQQMRAAM 88 (328)
T ss_dssp SSCEEEEESCCEEEEEECSST------------TEEEEEEECHHHHHHHHHHH-HCTTSEEEEECEECSSHHHHHHHHHH
T ss_pred cCCcEEEecCcEEEEecCCCC------------CceEEecCCHHHHHHHHHHh-cCCCCcEEEEEeeCCCHHHHHHHHHH
Confidence 456999999999999986211 34678999999999999998 52249999999999999999999999
Q ss_pred HHcCceeEEee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcc-hhhhhccccEEEEecccccc----CHHH
Q 020650 83 KLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPE-NWALVEKAKYFYIAGFFLTV----SPDS 156 (323)
Q Consensus 83 ~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~i~~~~~~~----~~~~ 156 (323)
++.||+++++. .++.+|+.+++.+++|+|+++.+.+..... ..+...+ ..+.++++|+++++++.+.. +.+.
T Consensus 89 ~~~GV~~~~v~~~~~~~T~~~~v~~~~g~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 166 (328)
T 4e69_A 89 SAAGIDGGGLRVIPGRTVGLYLITLEQGERSFAYWRGQSAAR--ELAGDADALAAAMARADVVYFSGITLAILDQCGRAT 166 (328)
T ss_dssp HHTTEECTTCEECTTCCCEEEEEEEETTEEEEEEECTTCGGG--GTTSCHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHH
T ss_pred HHcCCccceEEEcCCCCCeEEEEEecCCceEEEEeCCCCHHH--hhcCccccchHHhcCCCEEEECCchhhccCchHHHH
Confidence 99999999985 466789999888888888887665542210 1111111 12568899999999976432 3467
Q ss_pred HHHHHHHHHhCCCeEEEeCC--chhH--HHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcc
Q 020650 157 IQLVAEHAAANNKVFMMNLS--APFI--CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232 (323)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~--~~~~--~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 232 (323)
+.++++.+++.+.++++|+. +..| .....+.++++++.+|++++|++|++.+++ .++++++++.+
T Consensus 167 ~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l------ 235 (328)
T 4e69_A 167 LLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFG-----DAGPDATADRY------ 235 (328)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHT-----CSSHHHHHHHH------
T ss_pred HHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcC-----CCCHHHHHHHH------
Confidence 78899999999999999994 4344 133456678899999999999999999987 35788899998
Q ss_pred ccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 233 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 233 ~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
.+.+.+.++||+|++|++++++++.+++++++ ..+++||+||||+|.|+|+++|++|+++++|+++|+++|+++|++.
T Consensus 236 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~--~~~vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~A~~~aa~~v~~~ 313 (328)
T 4e69_A 236 ARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPP--VAQVVDTTAAGDSFNAGLLDSVLAGQPLETAIAAAAALAGQVVQGK 313 (328)
T ss_dssp HTTTCSEEEEBCTTSCEEEEETTEEEEECCCC--CCSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSS
T ss_pred HhcCCCEEEEEeCCCCeEEEeCCceEEecCCC--CCCccCCCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHccC
Confidence 66789999999999999999988888888643 2479999999999999999999999999999999999999999999
Q ss_pred CccCCCC
Q 020650 313 GCTYPEK 319 (323)
Q Consensus 313 G~~~p~~ 319 (323)
|+.+|..
T Consensus 314 Ga~~p~~ 320 (328)
T 4e69_A 314 GALVEVP 320 (328)
T ss_dssp SSSCCC-
T ss_pred CCcCChh
Confidence 9987754
No 18
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=1.4e-45 Score=325.41 Aligned_cols=294 Identities=19% Similarity=0.238 Sum_probs=238.8
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++...+. .|. .+..+....+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~~--~p~----~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~g~~i~~ 75 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQSG--VGL----ADVQSFGKYLGGSAANVSVAAAR-HG--HNSALLSRVGNDPFGEYLLA 75 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSSS--CCG----GGCCCBCCEEECHHHHHHHHHHH-TT--CCEEEEEEEESSHHHHHHHH
T ss_pred cccCCCEEEEChhheeeecccCC--CCc----cccceeeecCCCcHHHHHHHHHH-CC--CceEEEEEeCCCHHHHHHHH
Confidence 66677999999999999987765 332 24567788999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeeccc--c-cccCCcccCCCcchhhhhccccEEEEeccccccC--
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLS--A-ANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVS-- 153 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~-- 153 (323)
.|+++||+++++. .++.+|+.+++.++ +++++++.+.. + ...++++++. .+.+++++++|++++.+...
T Consensus 76 ~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~ 151 (319)
T 3pl2_A 76 ELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVS----LDDVREADILWFTLTGFSEEPS 151 (319)
T ss_dssp HHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSC----HHHHHHCSEEEEEGGGGSSTTH
T ss_pred HHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCC----HHHhccCCEEEEecccccCchh
Confidence 9999999999985 57778999988776 67777665532 3 4466666665 35688999999999865332
Q ss_pred HHHHHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcC
Q 020650 154 PDSIQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 229 (323)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~--~~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~ 229 (323)
.+.+..+++.+++ +.++++|+. +..|. ....+.++.+++++|++++|++|++.+++ .++++++++.+
T Consensus 152 ~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l--- 222 (319)
T 3pl2_A 152 RGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVG-----ETEPERAGRAL--- 222 (319)
T ss_dssp HHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHS-----CCSHHHHHHHH---
T ss_pred HHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcC-----CCCHHHHHHHH---
Confidence 2456667776665 455677774 33332 23456678899999999999999999987 35788888888
Q ss_pred CccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHh
Q 020650 230 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 230 ~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~ 309 (323)
.+.+.+.+++|+|++|++++++++.++++++++ +++||+||||+|.|||+++|++|+++++|+++|+++|++++
T Consensus 223 ---~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 296 (319)
T 3pl2_A 223 ---LERGVELAIVKQGPKGVMAMTKDETVEVPPFFV---DVINGLGAGDAFGGALCHGLLSEWPLEKVLRFANTAGALVA 296 (319)
T ss_dssp ---HHTTCSEEEEEEETTEEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ---HhcCCCEEEEEECCCCeEEEECCceEEeCCccc---CCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 667899999999999999998888888887544 79999999999999999999999999999999999999999
Q ss_pred hhcCc--cCCCCCCC
Q 020650 310 QRSGC--TYPEKPEF 322 (323)
Q Consensus 310 ~~~G~--~~p~~~~~ 322 (323)
++.|+ .+|+++|+
T Consensus 297 ~~~G~~~~~p~~~ev 311 (319)
T 3pl2_A 297 SRLECSTAMPTTDEV 311 (319)
T ss_dssp TSSCSGGGCCCHHHH
T ss_pred hccCCcCCCCCHHHH
Confidence 99997 57877653
No 19
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=2.4e-46 Score=333.97 Aligned_cols=295 Identities=17% Similarity=0.198 Sum_probs=240.1
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++|+|+|++++|++.. .++...+..+....+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 3 ~~v~viG~~~~D~~~~-------~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~g~~i~~~l~~ 72 (346)
T 3ktn_A 3 LKIAAFGEVMLRFTPP-------EYLMLEQTEQLRMNFVGTGVNLLANLAH-FQ--LETALITKLPANRLGEAGKAALRK 72 (346)
T ss_dssp CEEEEECCCEEEEECS-------TTCCTTTCSCCEEEEECHHHHHHHHHHH-TT--CEEEEEEEECSSHHHHHHHHHHHH
T ss_pred CcEEEeChhhhhhcCC-------CCCcccccceeEEeccCHHHHHHHHHHH-cC--CCeEEEEecCCCHHHHHHHHHHHH
Confidence 5899999999998852 2345566778889999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEeCC-ccceeec----ccccccCCcccCCCcchhhhhccccEEEEeccccccCH---HH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVVGG-ERSLVAN----LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP---DS 156 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~~g-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~---~~ 156 (323)
.||+++++...+.+|+.+++..+++ +++++.+ .++...+++++++ ..+.+++++++|++|+.+..++ +.
T Consensus 73 ~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~---~~~~~~~~~~v~~~g~~~~~~~~~~~~ 149 (346)
T 3ktn_A 73 LGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD---FEAFLAEVDMVHICGISLSLTEKTRDA 149 (346)
T ss_dssp TTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSC---HHHHHTTCSEEEECTHHHHHCHHHHHH
T ss_pred cCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcC---hHHHhCCCCEEEEeCccccCCHHHHHH
Confidence 9999999876667899988877644 4466555 2344556666664 2356889999999998754444 67
Q ss_pred HHHHHHHHHhCCCeEEEeCC--chhHH----HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhc-CC---CCCCHHHHHHHH
Q 020650 157 IQLVAEHAAANNKVFMMNLS--APFIC----EFFKDALEKVLPYMDYIFGNETEARTFSKVQ-GW---ETDDVEEIALKL 226 (323)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~--~~~~~----~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~-~~---~~~~~~~~~~~l 226 (323)
+.++++.+++.+.++++|+. +..|. ....+.++.+++++|++++|++|++.+++.. .. +.++++++++.|
T Consensus 150 ~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l 229 (346)
T 3ktn_A 150 ALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRF 229 (346)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHHHHH
Confidence 88999999999999999984 34443 3345678889999999999999999998743 11 112467777777
Q ss_pred hcCCcccc-CCccEEEEeeCCCc-------eEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHH
Q 020650 227 SQWPKASE-IRKRTAVITQGADP-------VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECV 298 (323)
Q Consensus 227 ~~~~~~~~-~~~~~vvit~G~~G-------~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~ 298 (323)
.. .|++.+++|+|++| ++++++++.++++++++ +++||+||||+|.|||+++|++|+++++|+
T Consensus 230 ------~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~l~~a~ 300 (346)
T 3ktn_A 230 ------MSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPL---LNLDRIGAGDAYAAGILYGYSQNWSLEKAV 300 (346)
T ss_dssp ------HHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEEC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred ------HHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCcc---ccCCCCchhHHHHHHHHHHHHcCCCHHHHH
Confidence 44 38999999999998 88888888888887665 789999999999999999999999999999
Q ss_pred HHHhHHHHHHhhhcCcc-CCCCCC
Q 020650 299 RAGCYTSHVIIQRSGCT-YPEKPE 321 (323)
Q Consensus 299 ~~A~~~Aa~~~~~~G~~-~p~~~~ 321 (323)
++|+++|++++++.|+. .|+.+|
T Consensus 301 ~~A~a~aa~~v~~~G~~~~p~~~e 324 (346)
T 3ktn_A 301 TFATVNGVLAHTIQGDIPLTTVKQ 324 (346)
T ss_dssp HHHHHHHHHHTTSSSSCCCCCHHH
T ss_pred HHHHHHHHHHhccCCCCCCCCHHH
Confidence 99999999999999985 566544
No 20
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=3.2e-47 Score=332.73 Aligned_cols=276 Identities=20% Similarity=0.243 Sum_probs=239.8
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+ |+|+|+|++++|++..+++ +|.++...........+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 1 M~--~~i~viG~~~iD~~~~~~~--~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-lG--~~~~~i~~vG~D~~g~~i~~ 73 (299)
T 3ikh_A 1 MS--LRVYVTGNITVDETWSIPD--IPKKGASIHGVKVSQDIGGKGANQAIILSR-CG--IETRLIAATGNDSNGAWIRQ 73 (299)
T ss_dssp -C--CCEEEECCCEEEEEEECSS--CCCTTCEEECEEEEEEEECHHHHHHHHHHH-TT--CCEEEECCCCSSHHHHHHHH
T ss_pred CC--ceEEEECceEEEEEEecCC--CCCCCCeEEeeeeeeccCCHHHHHHHHHHH-CC--CCeEEEEEECCCHHHHHHHH
Confidence 55 4899999999999999998 778888888888889999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHH
Q 020650 81 NSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQL 159 (323)
Q Consensus 81 ~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~ 159 (323)
.|+++||+++++..++.+|+.++++++ +|+|+++.+.+++..++++++.. ..+.++.++++++++. .+.+.+..
T Consensus 74 ~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~~~v~~~g~---~~~~~~~~ 148 (299)
T 3ikh_A 74 QIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIP--HMADAVAGDILLQQGN---FSLDKTRA 148 (299)
T ss_dssp HGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGG--GGTTCCTTCEEEECSC---SCHHHHHH
T ss_pred HHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHH--HHhhhccCCEEEECCC---CCHHHHHH
Confidence 999999999998767778999998886 78998887777777788776643 3355789999999863 46788999
Q ss_pred HHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccE
Q 020650 160 VAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRT 239 (323)
Q Consensus 160 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 239 (323)
+++.+++.+.++++|+.... +.+..+++.+|++++|++|++.+++ .+.+.
T Consensus 149 ~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g------------------------~g~~~ 198 (299)
T 3ikh_A 149 LFQYARSRGMTTVFNPSPVN------PDFCHLWPLIDIAVVNESEAELLQP------------------------YGVKT 198 (299)
T ss_dssp HHHHHHHTTCEEEECCCSCC------GGGGGCGGGCSEEEEEHHHHHHHCC------------------------CSCSE
T ss_pred HHHHHHHcCCEEEEccccch------hhHHHHHhhCCEEEecHHHHHHHhc------------------------CCCCE
Confidence 99999999999999997642 2356789999999999999988753 25789
Q ss_pred EEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHH-HHHHHhhcCCCHHH-HHHHHhHHHHHHhhhcCcc--
Q 020650 240 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG-GFLSQLVQEKPIEE-CVRAGCYTSHVIIQRSGCT-- 315 (323)
Q Consensus 240 vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~a-g~~~~l~~g~~~~~-a~~~A~~~Aa~~~~~~G~~-- 315 (323)
+++|+|++|++++++++.+++|++++ +++||+||||+|.| +|+++|++|+++++ |+++|+++|+++|++.|+.
T Consensus 199 vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~~a~~~aa~~v~~~G~~~~ 275 (299)
T 3ikh_A 199 LVITQGAAGAWLVQEGQRQFCPAVPA---EALDTTGAGDTFLAVMLASALLRGVAPDALALAHASRAAAITVSRRGTLSA 275 (299)
T ss_dssp EEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHSSSSTTT
T ss_pred EEEEECCCceEEEeCCceEEeCCCCC---ccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCCccccc
Confidence 99999999999998888888887544 78999999999999 99999999999999 9999999999999999984
Q ss_pred CCCCCC
Q 020650 316 YPEKPE 321 (323)
Q Consensus 316 ~p~~~~ 321 (323)
+|+++|
T Consensus 276 ~p~~~e 281 (299)
T 3ikh_A 276 FPGSRE 281 (299)
T ss_dssp SCCHHH
T ss_pred CCCHHH
Confidence 577654
No 21
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=2.1e-46 Score=332.16 Aligned_cols=294 Identities=18% Similarity=0.198 Sum_probs=234.6
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+| ++|+|+|++++|++...+. .+...........+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++
T Consensus 1 m~m-~~i~viG~~~~D~~~~~~~-----~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~g~~i~~ 71 (330)
T 3iq0_A 1 MSL-SKVFTIGEILVEIMASKIG-----QPFDQPGIWNGPYPSGAPAIFIDQVTR-LG--VPCGIISCVGNDGFGDINIH 71 (330)
T ss_dssp ----CEEEEESCCEEEEEEEEET-----CCSSSCEEEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEEESSHHHHHHHH
T ss_pred CCC-CCEEEEcceeEEEeccCCC-----CCccccccccCcCCCCHHHHHHHHHHH-CC--CcEEEEEEeCCChHHHHHHH
Confidence 654 5999999999999976322 111111112356889999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceee-cc-cccccCCcccCCCcchhhhhccccEEEEecccc--ccCH
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVA-NL-SAANCYKSEHLKKPENWALVEKAKYFYIAGFFL--TVSP 154 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~--~~~~ 154 (323)
.|++.||+++++. .++.+|+.+++.++ +|+|++.. .. ++...++++++.. ..+++++++|++|+.+ ....
T Consensus 72 ~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v~~sg~~~~~~~~~ 147 (330)
T 3iq0_A 72 RLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE----NILKDCTHFHIMGSSLFSFHMV 147 (330)
T ss_dssp HHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCG----GGGTTEEEEEEEGGGCSSHHHH
T ss_pred HHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCH----hHhccCCEEEEechhhcCcchH
Confidence 9999999999985 56778999988876 67874332 22 3555677777653 4688999999999875 1223
Q ss_pred HHHHHHHHHHHhCCCeEEEeCCch--hHH-HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCc
Q 020650 155 DSIQLVAEHAAANNKVFMMNLSAP--FIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 231 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~~~--~~~-~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~ 231 (323)
+.+.++++.+++.+.++++|+... .|. ....+.++.+++.+|++++|++|++.+++ .++++++++.+
T Consensus 148 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l----- 217 (330)
T 3iq0_A 148 DAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSP-----HSTPERAIAGF----- 217 (330)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCS-----CSSHHHHHHHH-----
T ss_pred HHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhC-----CCCHHHHHHHH-----
Confidence 568889999999999999999643 232 23456678889999999999999998876 35788888888
Q ss_pred cccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 232 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 232 ~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
.+.+++.+++|+|++|++++++++.+++|++++ +++|||||||+|.|+|+++|++|+++++|+++|+++|+++|++
T Consensus 218 -~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 293 (330)
T 3iq0_A 218 -LEEGVKEVIVKRGNQGASYYSANEQFHVESYPV---EEVDPTGAGDCFGGAWIACRQLGFDAHRALQYANACGALAVTR 293 (330)
T ss_dssp -HHHTCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTS
T ss_pred -HHcCCCEEEEEeCCCceEEEECCceEEecCCCC---ccCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC
Confidence 667899999999999999998888888887544 7999999999999999999999999999999999999999999
Q ss_pred cCc--cCCCCCC
Q 020650 312 SGC--TYPEKPE 321 (323)
Q Consensus 312 ~G~--~~p~~~~ 321 (323)
.|+ ..|+++|
T Consensus 294 ~G~~~~~p~~~e 305 (330)
T 3iq0_A 294 RGPMEGTSRLME 305 (330)
T ss_dssp CSSSTTCCCHHH
T ss_pred cCCCCCCCCHHH
Confidence 999 4676654
No 22
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=2.9e-45 Score=324.10 Aligned_cols=298 Identities=22% Similarity=0.306 Sum_probs=235.7
Q ss_pred CCc-cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHH
Q 020650 1 MAQ-EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMK 79 (323)
Q Consensus 1 m~~-~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~ 79 (323)
|+| +++|+|+|++++|++...... .+.........+....+||++.|+|.+|++ +| .++.++|.+|+|.+|++++
T Consensus 1 m~m~~~~v~~iG~~~~D~~~~~~~~-~~~~~~~~p~~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~G~~i~ 76 (325)
T 3h49_A 1 MSLDNLDVICIGAAIVDIPLQPVSK-NIFDVDSYPLERIAMTTGGDAINEATIISR-LG--HRTALMSRIGKDAAGQFIL 76 (325)
T ss_dssp ----CEEEEEESCCEEEEEECSCCG-GGGGSSCCCCSCCCCEEESHHHHHHHHHHH-TT--CEEEEECEEESSHHHHHHH
T ss_pred CCCCCCeEEEEChhhheeeccCCCC-ccccccccchheeEEccCcHHHHHHHHHHH-CC--CCeEEEEEECCChHHHHHH
Confidence 676 459999999999997654321 111111112245678999999999999998 56 9999999999999999999
Q ss_pred HHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeeccc-ccccCCcccCCCcchhhhhccccEEEEeccccc--cCH
Q 020650 80 KNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLS-AANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSP 154 (323)
Q Consensus 80 ~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~ 154 (323)
+.|++.||+++++. .++.+|+.++++++ +|+|+++.+.+ +...++++++.. +.+.++++++++++... .+.
T Consensus 77 ~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~ 152 (325)
T 3h49_A 77 DHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDF----ARFSQAKLLSLASIFNSPLLDG 152 (325)
T ss_dssp HHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCG----GGGGGCSEEEEEEETTSTTSCH
T ss_pred HHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcCh----hhhccCCEEEEecccCCcccCH
Confidence 99999999999985 46778999988886 78888876654 334566666653 45789999999986532 345
Q ss_pred HHHHHHHHHHHhCCCeEEE-eCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccc
Q 020650 155 DSIQLVAEHAAANNKVFMM-NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 233 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 233 (323)
+.+.++++.+++++..+.. ++++..|. ..+.+.++++++|++++|++|++.+++ .++++++++.+ .
T Consensus 153 ~~~~~~~~~a~~~~~~~~d~~~~~~~~~--~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l------~ 219 (325)
T 3h49_A 153 KALTEIFTQAKARQMIICADMIKPRLNE--TLDDICEALSYVDYLFPNFAEAKLLTG-----KETLDEIADCF------L 219 (325)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHHHHTTCSEEECBHHHHHHHHT-----CSSHHHHHHHH------H
T ss_pred HHHHHHHHHHHhcCCEEEecCCchhhhh--HHHHHHHHHhhCCEEecCHHHHHHHhC-----CCCHHHHHHHH------H
Confidence 7889999999998854332 34544331 234467889999999999999999987 35788888888 6
Q ss_pred cCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcC
Q 020650 234 EIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313 (323)
Q Consensus 234 ~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G 313 (323)
..+++.+++|+|++|++++++++.+++|+++. .+++|||||||+|.|||+++|++|+++++|+++|+++|+++|++.|
T Consensus 220 ~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G 297 (325)
T 3h49_A 220 ACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAG--ITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVG 297 (325)
T ss_dssp TTTCSEEEEECTTSCEEEEETTEEEEECCCSS--CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSS
T ss_pred HcCCCEEEEEeCCCCeEEEECCeEEEecCcCC--CCCcCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcccC
Confidence 67899999999999999999888888876532 3789999999999999999999999999999999999999999999
Q ss_pred cc--CCCCCC
Q 020650 314 CT--YPEKPE 321 (323)
Q Consensus 314 ~~--~p~~~~ 321 (323)
+. +|+++|
T Consensus 298 ~~~~~p~~~e 307 (325)
T 3h49_A 298 ATTGVKNRKL 307 (325)
T ss_dssp SSSSCSSSHH
T ss_pred CCCCCCCHHH
Confidence 74 677655
No 23
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=1.4e-46 Score=332.82 Aligned_cols=292 Identities=18% Similarity=0.270 Sum_probs=226.2
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
+++|+|+|++++|++...++ .|. .+.......+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++.|+
T Consensus 21 ~~~v~viG~~~~D~~~~~~~--~p~----~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~g~~i~~~l~ 91 (327)
T 3hj6_A 21 DLDVVSLGEILVDMISTEEV--NSL----SQSREYTRHFGGSPANIAVNLSR-LG--KKVALISRLGADAFGNYLLDVLK 91 (327)
T ss_dssp -CCEEEESCCEEEEECCCCC--SSG----GGCCEEEEEEECHHHHHHHHHHH-TT--CCEEEECEEESSHHHHHHHHHHH
T ss_pred CCCEEEEccceEEEeccCCC--CCc----cccceeeeecCcHHHHHHHHHHH-cC--CcEEEEEEeCCCHHHHHHHHHHH
Confidence 46899999999999988876 333 25667888999999999999998 56 99999999999999999999999
Q ss_pred HcCceeEEee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccc--cCHHHHHHH
Q 020650 84 LAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQLV 160 (323)
Q Consensus 84 ~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~~~~~~~ 160 (323)
++||+++++. .++.+|+.+++..++|+|+++.+.+++..++++++. .+.++++|++|++++.+. .+.+.+.++
T Consensus 92 ~~gv~~~~v~~~~~~~t~~~~v~~~~g~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~v~~~g~~l~~~~~~~~~~~~ 167 (327)
T 3hj6_A 92 GEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADMYLQEDDII----FELIKRSKVFHLSTFILSRKPARDTAIKA 167 (327)
T ss_dssp HTTCBCTTCEEESSSCCCEEEECCCTTCCCEEEECSGGGGCCSCCCH----HHHHC--CEEEEESHHHHSHHHHHHHHHH
T ss_pred HcCCCcccEEEcCCCCceEEEEEecCCCccEEEecChhhhCChhhcC----HhHhccCCEEEECchHhcCchhHHHHHHH
Confidence 9999999985 567788888776667888887777776666665543 356789999999987542 345788899
Q ss_pred HHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCC
Q 020650 161 AEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR 236 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 236 (323)
++.+++++.++++|+... .|. ....+.++.+++++|++++|++|++.+++. ++.+++++.+ .+.+
T Consensus 168 ~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l------~~~g 236 (327)
T 3hj6_A 168 FNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGP-----DSPENYVKRY------LELG 236 (327)
T ss_dssp HHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTT-----SCSSGGGGGG------TTTT
T ss_pred HHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----CCHHHHHHHH------HhCC
Confidence 999999999999999642 221 112455778999999999999999999874 3455666677 6678
Q ss_pred ccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc--
Q 020650 237 KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC-- 314 (323)
Q Consensus 237 ~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~-- 314 (323)
.+.+++|+|++|++++++++.+++++++ ++++|||||||+|.|||+++|++|+++++|+++|+++|++++++.|+
T Consensus 237 ~~~vvvt~G~~G~~~~~~~~~~~~~~~~---v~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~ 313 (327)
T 3hj6_A 237 VKAVILTLGEEGVIASDGEEIIRIPAFS---EDAVDVTGAGDAFWSGFICGLLDGYTVKRSIKLGNGVAAFKIRGVGALS 313 (327)
T ss_dssp CSEEEEECSTTCEEEECSSCEEESCSST---TC-----CCHHHHHHHHHHTTSSCSTTHHHHHHHHCCCSSCC-------
T ss_pred CCEEEEEECCCceEEEeCCeeEEcCCcc---cccCCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999888888877654 47999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCC
Q 020650 315 TYPEKPEF 322 (323)
Q Consensus 315 ~~p~~~~~ 322 (323)
.+|+++|+
T Consensus 314 ~~p~~~ev 321 (327)
T 3hj6_A 314 PVPSKEDI 321 (327)
T ss_dssp --------
T ss_pred CCCCHHHH
Confidence 57888875
No 24
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=5.9e-46 Score=325.35 Aligned_cols=286 Identities=20% Similarity=0.281 Sum_probs=236.7
Q ss_pred CCccc-eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHH
Q 020650 1 MAQEG-ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMK 79 (323)
Q Consensus 1 m~~~~-~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~ 79 (323)
|.++| +|+++|++++|++..+++ +|.++...........+||++.|+|.++++ +| .++.++|.+|+|.+|+.++
T Consensus 1 ~~~~m~~i~viG~~~iD~~~~~~~--~p~~~~~~~~~~~~~~~GG~~~N~A~~la~-LG--~~~~~i~~vG~D~~g~~i~ 75 (302)
T 2c4e_A 1 MGGKMEKITCVGHTALDYIFNVEK--FPEPNTSIQIPSARKYYGGAAANTAVGIKK-LG--VNSELLSCVGYDFKNSGYE 75 (302)
T ss_dssp -CCCEEEEEEESCCEEEEEEECSS--CCCTTCCCCCSCEEEEEECHHHHHHHHHHH-TT--CEEEEECEECTTTTTSHHH
T ss_pred CCCCcCcEEEECceeEEEEecccc--cCCCCceeeecceeecCCCHHHHHHHHHHH-CC--CceEEEEEEeCCCchHHHH
Confidence 55443 899999999999999988 677777777777889999999999999998 56 9999999999999999999
Q ss_pred HHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHH
Q 020650 80 KNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI 157 (323)
Q Consensus 80 ~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~ 157 (323)
+.|++.||+++++. .++.+|+.++++++ +|+|+++.+.++...++++++.. .+++++|+++. .++.+
T Consensus 76 ~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~----~~~~~ 144 (302)
T 2c4e_A 76 RYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN-------FNTEIVHIATG----DPEFN 144 (302)
T ss_dssp HHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC-------CCEEEEEECSS----CHHHH
T ss_pred HHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc-------ccCCEEEEeCC----CcHHH
Confidence 99999999999875 56678999998886 68888877777766677666642 68999999863 34788
Q ss_pred HHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCc
Q 020650 158 QLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK 237 (323)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 237 (323)
..+++.+++.+ ++++|+....+. ...+.++++++++|++++|++|++.+++.... +.. .+ .+. .
T Consensus 145 ~~~~~~a~~~g-~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~---~~~----~l------~~~-~ 208 (302)
T 2c4e_A 145 LKCAKKAYGNN-LVSFDPGQDLPQ-YSKEMLLEIIEHTNFLFMNKHEFERASNLLNF---EID----DY------LER-V 208 (302)
T ss_dssp HHHHHHHBTTB-EEEECCGGGGGG-CCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTC---CHH----HH------HTT-C
T ss_pred HHHHHHHHhcC-CEEEeCchhhhh-hhHHHHHHHHhcCCEEEcCHHHHHHHhCCCCc---cHH----HH------Hhc-C
Confidence 89999999999 999999743211 01345678899999999999999999875432 221 45 445 7
Q ss_pred cEEEEeeCCCceEEeeCCeeeEEeceeCCCCc-ccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc-
Q 020650 238 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDK-LVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT- 315 (323)
Q Consensus 238 ~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~-~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~- 315 (323)
+.+++|+|++|++++++++.+++|++++ + ++||+||||+|.|||+++|++|+++++|+++|+++|++++++.|+.
T Consensus 209 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~~G~~~ 285 (302)
T 2c4e_A 209 DALIVTKGSKGSVIYTKDKKIEIPCIKA---GKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGCQT 285 (302)
T ss_dssp SEEEEECGGGCEEEECSSCEEEECCCCC---SCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSST
T ss_pred CEEEEEECCCceEEEeCCcEEEeCCccC---CcCCcCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccccccc
Confidence 8999999999999988777778876543 6 8999999999999999999999999999999999999999999984
Q ss_pred -CCCCCC
Q 020650 316 -YPEKPE 321 (323)
Q Consensus 316 -~p~~~~ 321 (323)
+|+++|
T Consensus 286 ~~p~~~e 292 (302)
T 2c4e_A 286 NLPTWDK 292 (302)
T ss_dssp TCCCHHH
T ss_pred cCCCHHH
Confidence 566544
No 25
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=4.7e-45 Score=321.71 Aligned_cols=291 Identities=21% Similarity=0.247 Sum_probs=234.5
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++|+|+|++++|++..+++ .|.++...... ....+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 4 ~~i~viG~~~~D~~~~~~~--~~~~~~~~~~~-~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~G~~l~~~L~~ 77 (317)
T 2nwh_A 4 KKILVLGGAHIDRRGMIET--ETAPGASNPGS-WMEEAGGGGFNAARNLSR-LG--FEVRIIAPRGGDVTGEVVAEAARQ 77 (317)
T ss_dssp CEEEEESCCEEEEEEEESS--SCCTTSCCCEE-EEEEEECHHHHHHHHHHH-TT--CEEEEECEEESSHHHHHHHHHHHH
T ss_pred CeEEEECchheEEeeccCC--CCCCCCCceEe-EEEeCCcHHHHHHHHHHh-cC--CCcEEEEeecCCchHHHHHHHHHH
Confidence 4899999999999998886 45555544444 678999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEe-CCccceeecc-cccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVV-GGERSLVANL-SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~ 162 (323)
+||+++++..++.+|+.++++++ +|++++..+. +....++++++......+.+..++++++++ ..+.+.+..+++
T Consensus 78 ~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~ 154 (317)
T 2nwh_A 78 AGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDFLLCDA---NLPEDTLTALGL 154 (317)
T ss_dssp TTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSEEEEET---TSCHHHHHHHHH
T ss_pred cCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCEEEEeC---CCCHHHHHHHHH
Confidence 99999996567778999998886 6888765443 334456666554311115678899999975 346788999999
Q ss_pred HHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEE
Q 020650 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI 242 (323)
Q Consensus 163 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvi 242 (323)
.+++.+.++++|+.... ..+.++++++++|++++|++|++.+++. +.++++++++.+ .+.|++.+++
T Consensus 155 ~a~~~g~~v~~Dp~~~~----~~~~~~~ll~~~dil~~N~~E~~~l~g~---~~~~~~~~~~~l------~~~g~~~vvv 221 (317)
T 2nwh_A 155 IARACEKPLAAIAISPA----KAVKLKAALGDIDILFMNEAEARALTGE---TAENVRDWPNIL------RKAGLSGGVV 221 (317)
T ss_dssp HHHHTTCCEEEECCSHH----HHGGGTTTGGGCSEEEEEHHHHHHHHC--------CTTHHHHH------HHTTCCCEEE
T ss_pred HHHhcCCeEEEeCCCHH----HHHHHHHHhhhCeEecCCHHHHHHHhCC---ChhHHHHHHHHH------HHcCCCEEEE
Confidence 99999999999997533 2234567889999999999999999874 224556677777 5668899999
Q ss_pred eeCCCceEEeeCC-eeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccC--CCC
Q 020650 243 TQGADPVVVAQDG-KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTY--PEK 319 (323)
Q Consensus 243 t~G~~G~~~~~~~-~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~--p~~ 319 (323)
|+|++|+++++++ ..+++++++ ++++||+||||+|.|+|+++|++|+++++|+++|+++|+.++++.|+.. |++
T Consensus 222 t~G~~G~~~~~~~~~~~~~~~~~---v~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~~ 298 (317)
T 2nwh_A 222 TRGASEVVAFNGTEKAILHPPLI---REVKDVTGAGDAMASGYLAAIAEGKTIREALRQGAAAAAITVQSSFATSQDLSK 298 (317)
T ss_dssp EETTTEEEEECSSCEEEECCCCS---SSCSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHSSTTCCGGGCCH
T ss_pred EECCCcEEEEcCCCceEEeCCCC---ccccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999999998765 456776543 4799999999999999999999999999999999999999999999953 554
Q ss_pred C
Q 020650 320 P 320 (323)
Q Consensus 320 ~ 320 (323)
+
T Consensus 299 ~ 299 (317)
T 2nwh_A 299 D 299 (317)
T ss_dssp H
T ss_pred H
Confidence 4
No 26
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=4.3e-45 Score=320.99 Aligned_cols=293 Identities=19% Similarity=0.190 Sum_probs=240.6
Q ss_pred ccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHH
Q 020650 3 QEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNS 82 (323)
Q Consensus 3 ~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l 82 (323)
|+|-++|.+++++|++..+++ + .+++.++..+....+||++.|+|.++++ +| .++.++|.+|+| .|+.+++.|
T Consensus 1 m~~i~~v~~n~~~D~~~~v~~--~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~d-~g~~i~~~l 73 (309)
T 3umo_A 1 MVRIYTLTLAPSLDSATITPQ--I-YPEGKLRCTAPVFEPGGGGINVARAIAH-LG--GSATAIFPAGGA-TGEHLVSLL 73 (309)
T ss_dssp CCCEEEECSSCEEEEEEEESC--C-CSSSEEECCCCEEEEESHHHHHHHHHHH-TT--CCEEEEEEECHH-HHHHHHHHH
T ss_pred CCcEEEEecchhheEEEEcCc--c-cCCCeEEeceeeecCCchHHHHHHHHHH-cC--CCeEEEEEecCc-hHHHHHHHH
Confidence 344566668999999999998 5 5789999999999999999999999998 56 999999999999 999999999
Q ss_pred HHcCceeEEeecCCCCceeEEEEEe--CCccceeecccccccCCcccCCC-cchhhhhccccEEEEecccc-ccCHHHHH
Q 020650 83 KLAGVNVHYYEDESASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKK-PENWALVEKAKYFYIAGFFL-TVSPDSIQ 158 (323)
Q Consensus 83 ~~~gi~~~~~~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~i~~~~~-~~~~~~~~ 158 (323)
+++||+++++...+ +|+.++.+++ +|+++++...++ .+++++++. .+..+.+...++++++++.+ ..+.+.+.
T Consensus 74 ~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (309)
T 3umo_A 74 ADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLT 150 (309)
T ss_dssp HHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSCTTCEEEEESCCCTTCCHHHHH
T ss_pred HHcCCceEEEEecC-CCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcCCCCEEEEEccCCCCCCHHHHH
Confidence 99999999987543 4666555454 577777666554 355554422 01112235788999998653 45678899
Q ss_pred HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCC--CcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCC
Q 020650 159 LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPY--MDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR 236 (323)
Q Consensus 159 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~--~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 236 (323)
.+++.+++++.++++|+.... +.++++. +|++++|++|++.+++....+.++++++++.+ .+.+
T Consensus 151 ~~~~~a~~~~~~v~~D~~~~~--------l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g 216 (309)
T 3umo_A 151 QLISAAQKQGIRCIVDSSGEA--------LSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEI------VNSG 216 (309)
T ss_dssp HHHHHHHHTTCEEEEECCHHH--------HHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHH------HHTT
T ss_pred HHHHHHHhcCCEEEEECCcHH--------HHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcC
Confidence 999999999999999996432 5677777 59999999999999986554556788888888 5666
Q ss_pred c-cEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc
Q 020650 237 K-RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT 315 (323)
Q Consensus 237 ~-~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~ 315 (323)
. +.+++|+|++|++++++++.++++++++ +++||+||||+|.|+|+++|++|+++++|+++|+++|++++++.|+.
T Consensus 217 ~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGD~f~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~ 293 (309)
T 3umo_A 217 KAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTR 293 (309)
T ss_dssp SBSCEEEECGGGCEEEECSSCEEEECCCSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSTTC
T ss_pred CCcEEEEEcCcccEEEEECCcEEEEeCCCc---CCCCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCC
Confidence 5 7999999999999998888888886543 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 020650 316 YPEKPEF 322 (323)
Q Consensus 316 ~p~~~~~ 322 (323)
+|+++|+
T Consensus 294 ~~~~~ev 300 (309)
T 3umo_A 294 LCSHDDT 300 (309)
T ss_dssp CCCHHHH
T ss_pred CCCHHHH
Confidence 8887653
No 27
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.1e-44 Score=318.46 Aligned_cols=285 Identities=24% Similarity=0.337 Sum_probs=240.4
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCc-EEEEeeeecCchhHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNS 82 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~-v~~~~~vG~D~~g~~i~~~l 82 (323)
-++|+|+|++++|++..+++ +|.+++..+..+....+||++.|+|.+|++ +| .+ +.++|.+|+|.+|+.+++.|
T Consensus 14 ~~~v~vvG~~~iD~~~~~~~--~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~i~~vG~D~~G~~l~~~L 88 (311)
T 1vm7_A 14 FLVISVVGSSNIDIVLKVDH--FTKPGETQKAIEMNVFPGGKGANQAVTVAK-IG--EKGCRFVTCIGNDDYSDLLIENY 88 (311)
T ss_dssp CCCEEEECCCEEEEEEECSS--CCCTTCEEECSEEEEEEECHHHHHHHHHHH-HH--SSCEEEEEEECSSHHHHHHHHHH
T ss_pred cCCEEEECcceeeEEEeccc--CCCCCceEecCeeeecCCCHHHHHHHHHHH-cC--CCceEEEEEECCChHHHHHHHHH
Confidence 35899999999999999998 777788888888889999999999999998 66 89 99999999999999999999
Q ss_pred HHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHH
Q 020650 83 KLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV 160 (323)
Q Consensus 83 ~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~ 160 (323)
++.|| ++. .++.+|+.++++++ +|+|+++.+.++...+++++++ .+.+++++++++++. .+.+.+..
T Consensus 89 ~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~----~~~~~~~~~v~~~~~---~~~~~~~~- 157 (311)
T 1vm7_A 89 EKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELID----WNTLSESDILLLQNE---IPFETTLE- 157 (311)
T ss_dssp HHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCC----HHHHTTCSEEEECSS---SCHHHHHH-
T ss_pred HHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhC----hhhcccCCEEEEeCC---CCHHHHHH-
Confidence 99999 554 46678999998887 5888888777777778777765 355789999999763 34444433
Q ss_pred HHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEE
Q 020650 161 AEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 240 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 240 (323)
.+++.+.++++|+... .+....+++.+|++++|++|++.+++....+.++++++++.+ .+.+.+.+
T Consensus 158 --~a~~~~~~v~~Dp~~~------~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~~v 223 (311)
T 1vm7_A 158 --CAKRFNGIVIFDPAPA------QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKF------LELGVKNV 223 (311)
T ss_dssp --HHHHCCSEEEECCCSC------TTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHH------HHTTCSEE
T ss_pred --HHHHcCCEEEEeCcch------hhhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHH------HHcCCCEE
Confidence 3778899999999752 122457889999999999999999886444456788888888 66789999
Q ss_pred EEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCcc--CCC
Q 020650 241 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT--YPE 318 (323)
Q Consensus 241 vit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~--~p~ 318 (323)
++|+|++|++++++++.+++++++ ++++||+||||+|.|+|+++|++|+++++|+++|+++|+.++++.|+. +|+
T Consensus 224 vvT~G~~G~~~~~~~~~~~~~~~~---v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~ 300 (311)
T 1vm7_A 224 IVKLGDKGVLLVNKNEKKHFPTFK---VKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPA 300 (311)
T ss_dssp EEECGGGCEEEEETTEEEEECCCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSGGGCCC
T ss_pred EEEECCCCeEEEeCCceEEecCCC---cccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCcCCccccCCC
Confidence 999999999999888877777644 478999999999999999999999999999999999999999999984 676
Q ss_pred CCC
Q 020650 319 KPE 321 (323)
Q Consensus 319 ~~~ 321 (323)
.+|
T Consensus 301 ~~e 303 (311)
T 1vm7_A 301 REE 303 (311)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 28
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=6.3e-44 Score=316.66 Aligned_cols=297 Identities=20% Similarity=0.244 Sum_probs=235.2
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++..... .|. .........+||++.|+|.++++ +| .++.++|.+|+|.+|+++++
T Consensus 8 ~~~~~~i~viG~~~~D~~~~~~~--~~~----~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~G~~l~~ 78 (332)
T 2qcv_A 8 TDREFDLIAIGRACIDLNAVEYN--RPM----EETMTFSKYVGGSPANIVIGSSK-LG--LKAGFIGKIADDQHGRFIES 78 (332)
T ss_dssp SCCSEEEEEESCCEEEEEESSCS--SCG----GGCCCEEEEEESHHHHHHHHHHH-TT--CCEEEEEEECSSHHHHHHHH
T ss_pred cccCCcEEEECcceEEEecCCCC--CCc----cccceeEecCCCHHHHHHHHHHH-cC--CceEEEEEeCCCHHHHHHHH
Confidence 34456999999999999987654 221 23456788999999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cC-CCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEecccccc--C
Q 020650 81 NSKLAGVNVHYYE-DE-SASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTV--S 153 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~-~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~--~ 153 (323)
.|+++||+++++. .+ +.+|+.+++.++ +|+++++.+. +++..++++++.. ..+++++++|++|+.+.. +
T Consensus 79 ~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~~~~~v~~~g~~~~~~~~ 154 (332)
T 2qcv_A 79 YMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNE----AYIRRSKLLLVSGTALSKSPS 154 (332)
T ss_dssp HHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCH----HHHTTEEEEEEEGGGGSSTTH
T ss_pred HHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCH----HHHccCCEEEEeCccccCchh
Confidence 9999999999985 33 357888887765 5777665443 2445666666652 457899999999976432 2
Q ss_pred HHHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcC
Q 020650 154 PDSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 229 (323)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~~--~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~ 229 (323)
.+.+..+++.+++.+.++++|+.. ..|. ....+.++.+++++|++++|++|++.+++... .++..++++.+
T Consensus 155 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~--~~~~~~~~~~l--- 229 (332)
T 2qcv_A 155 REAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTE--KGDNDETIRYL--- 229 (332)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSS--CCCHHHHHHHH---
T ss_pred HHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCc--CCCHHHHHHHH---
Confidence 367889999999999999999864 2221 22344567789999999999999999987432 24677888888
Q ss_pred CccccCCccEEEEeeCCCceEEeeC-CeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHH
Q 020650 230 PKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVI 308 (323)
Q Consensus 230 ~~~~~~~~~~vvit~G~~G~~~~~~-~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~ 308 (323)
.+.+++.++||+|++|++++++ ++.++++++++ +++||+||||+|.|+|+++|++|+++++|+++|+++|+++
T Consensus 230 ---~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~ 303 (332)
T 2qcv_A 230 ---FKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKT---KVLKTFGAGDSYASAFLYALISGKGIETALKYGSASASIV 303 (332)
T ss_dssp ---TTSSCSEEEEECGGGCEEEEETTSCEEEECCBCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ---HHcCCCEEEEEECCcceEEEecCCceEEcCCCCc---cccCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 6678999999999999999887 56777776544 7899999999999999999999999999999999999999
Q ss_pred hhhcCcc--CCCCCC
Q 020650 309 IQRSGCT--YPEKPE 321 (323)
Q Consensus 309 ~~~~G~~--~p~~~~ 321 (323)
+++.|+. +|+++|
T Consensus 304 v~~~G~~~~~p~~~e 318 (332)
T 2qcv_A 304 VSKHSSSDAMPSVEE 318 (332)
T ss_dssp HHC-----CCCCHHH
T ss_pred HccCCCccCCCCHHH
Confidence 9999984 666544
No 29
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=1.4e-44 Score=320.34 Aligned_cols=291 Identities=17% Similarity=0.192 Sum_probs=234.4
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
|.++|+|++++|++..+++ + .+++..+.......+||++.|+|.++++ +| .++.++|.+|+ .+|+.+++.|++
T Consensus 21 Mi~~v~G~~~~D~~~~~~~--~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~-~~G~~l~~~L~~ 93 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPLTA--L-KLDDVNRVQEVSKTAGGKGLNVTRVLAQ-VG--EPVLASGFIGG-ELGQFIAKKLDH 93 (330)
T ss_dssp CEEEEESSCEEEEEEEESC--C-CTTSEEEESCCEEEEECHHHHHHHHHHH-HT--CCEEEEEEEEH-HHHHHHHHHHHH
T ss_pred EEEEEecchhheEEEecCC--c-cCCceEEeceEEEcCCchHHHHHHHHHH-hC--CCeEEEEEecc-hhHHHHHHHHHH
Confidence 5788999999999999987 4 5677788888899999999999999998 66 99999999997 699999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc--chhhhhccccEEEEecccc-ccCHHHHHHHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP--ENWALVEKAKYFYIAGFFL-TVSPDSIQLVA 161 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~ 161 (323)
.||+++++...+ .|++++++++.++++.+...++ .+++++++.. ...+.++++|++|++++.+ ..+.+.+.+++
T Consensus 94 ~gV~~~~v~~~~-~t~~~~~~v~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 170 (330)
T 2jg1_A 94 ADIKHAFYNIKG-ETRNCIAILHEGQQTEILEQGP--EIDNQEAAGFIKHFEQMMEKVEAVAISGSLPKGLNQDYYAQII 170 (330)
T ss_dssp TTCEECCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHGGGCSEEEEESCCCBTSCTTHHHHHH
T ss_pred CCCceeEEEccC-CCeeEEEEEeCCCcEEEECCCC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHH
Confidence 999999986543 4777777776445544433332 3444443320 0113467899999988654 34567889999
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC---CCcEEEeCHHHHHHHHhhcCC-CCCCHHHHHHHHhcCCccccCCc
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLP---YMDYIFGNETEARTFSKVQGW-ETDDVEEIALKLSQWPKASEIRK 237 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~---~~dvl~~n~~e~~~l~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~ 237 (323)
+.+++.+.++++|+.+.. +.++++ .+|++++|++|++.+++.... +.++++++++.+ .+.+.
T Consensus 171 ~~a~~~g~~v~~D~~~~~--------l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l------~~~g~ 236 (330)
T 2jg1_A 171 ERCQNKGVPVILDCSGAT--------LQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQP------LFEGI 236 (330)
T ss_dssp HHHHTTTCCEEEECCHHH--------HHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSG------GGTTC
T ss_pred HHHHHCCCEEEEECCcHH--------HHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHH------HHcCC
Confidence 999999999999997432 445565 899999999999999874321 223466677777 66789
Q ss_pred cEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCC
Q 020650 238 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317 (323)
Q Consensus 238 ~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p 317 (323)
+.+++|+|++|++++++++.+++|+++ ++++|||||||+|.|||+++|++|+++++|+++|+++|++++++.|+.+|
T Consensus 237 ~~VvvT~G~~Ga~~~~~~~~~~~~~~~---v~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~A~a~aa~~v~~~G~~~~ 313 (330)
T 2jg1_A 237 EWIIVSLGAQGAFAKHNHTFYRVNIPT---ISVLNPVGSGDSTVAGITSAILNHENDHDLLKKANTLGMLNAQEAQTGYV 313 (330)
T ss_dssp SEEEEECGGGCEEEEETTEEEEEECCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCC
T ss_pred CEEEEeecCCceEEEeCCCEEEEeCCC---ccccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcCCCCC
Confidence 999999999999999888888887654 47999999999999999999999999999999999999999999999888
Q ss_pred CCCCC
Q 020650 318 EKPEF 322 (323)
Q Consensus 318 ~~~~~ 322 (323)
+++|+
T Consensus 314 ~~~ev 318 (330)
T 2jg1_A 314 NLNNY 318 (330)
T ss_dssp CGGGH
T ss_pred CHHHH
Confidence 87664
No 30
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=1.8e-44 Score=317.56 Aligned_cols=284 Identities=20% Similarity=0.270 Sum_probs=230.5
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
+|+|+|++++|++...+ +...+..+....+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++.|++.
T Consensus 3 ~v~viG~~~~D~~~~~~-------~~~~~~~~~~~~~GG~~~N~A~~la~-LG--~~~~~i~~vG~D~~g~~~~~~l~~~ 72 (313)
T 2v78_A 3 DVIALGEPLIQFNSFNP-------GPLRFVNYFEKHVAGSELNFCIAVVR-NH--LSCSLIARVGNDEFGKNIIEYSRAQ 72 (313)
T ss_dssp CEEEECCCEEEEEESSS-------SCGGGCCEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEEESSHHHHHHHHHHHHT
T ss_pred eEEEECcceEEEecCCC-------CcccccceeEecCCChHHHHHHHHHH-CC--CcEEEEEEeCCCHHHHHHHHHHHHc
Confidence 79999999999986322 34455667788999999999999998 56 9999999999999999999999999
Q ss_pred CceeEEee-cCCCCceeEEEE--Ee-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEecccccc---CHHH
Q 020650 86 GVNVHYYE-DESASTGTCAVC--VV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTV---SPDS 156 (323)
Q Consensus 86 gi~~~~~~-~~~~~t~~~~~~--~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~---~~~~ 156 (323)
||+++++. .++.+|+.+++. ++ +|+|++..+. ++...++++++.. ..+++++++|++++.+.+ +.+.
T Consensus 73 gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~~ 148 (313)
T 2v78_A 73 GIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINE----NYVRNSRLVHSTGITLAISDNAKEA 148 (313)
T ss_dssp TCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCH----HHHHTSSEEEEEHHHHHHCHHHHHH
T ss_pred CCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCH----HHhcCCCEEEEcCchhhcChHHHHH
Confidence 99999986 466789999987 65 6777765443 4556677776653 457899999999876532 2356
Q ss_pred HHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCc--EEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 157 IQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMD--YIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 157 ~~~~~~~~~~~~~~~~~d~~--~~~~~--~~~~~~~~~~l~~~d--vl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
+.++++.+++. ++|+. ...|. ....+.++++++++| ++++|++|++.+++ .++++++++.+
T Consensus 149 ~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g-----~~~~~~~~~~l---- 215 (313)
T 2v78_A 149 VIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLD-----VTDPDEAYRKY---- 215 (313)
T ss_dssp HHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHS-----CCCHHHHHHHH----
T ss_pred HHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhC-----CCCHHHHHHHH----
Confidence 66677766554 56664 33442 223456778899999 99999999999986 35788888888
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhh
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
...|++.+++|+|++|++++++++.+++|++++ +++|||||||+|.|||+++|++|+++++|+++|+++|+++++
T Consensus 216 --~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~a~~~aa~~v~ 290 (313)
T 2v78_A 216 --KELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKV---PVEDPTGAGDAMAGTFVSLYLQGKDIEYSLAHGIAASTLVIT 290 (313)
T ss_dssp --HHTTEEEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred --HhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcC---CccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 667899999999999999998888888886544 799999999999999999999999999999999999999999
Q ss_pred hcCcc--CCCCCC
Q 020650 311 RSGCT--YPEKPE 321 (323)
Q Consensus 311 ~~G~~--~p~~~~ 321 (323)
+.|+. .|++++
T Consensus 291 ~~G~~~~~~~~~~ 303 (313)
T 2v78_A 291 VRGDNELTPTLED 303 (313)
T ss_dssp SSSSSTTCCCHHH
T ss_pred cCCCCCCCCCHHH
Confidence 99995 466544
No 31
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=2.2e-45 Score=327.59 Aligned_cols=291 Identities=18% Similarity=0.163 Sum_probs=229.6
Q ss_pred cceEEEeCCceeeeEee--cChhH--HhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHH
Q 020650 4 EGILLGMGNPLLDISSV--VDDDF--LNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMK 79 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~--~~~~~--~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~ 79 (323)
+++|+|+|++++|++.. +++.. .|.+ ..........+||. .|+|.+|++ +| .++.++|.+|+|.+|+.++
T Consensus 53 ~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~--~~~~~~~~~~~GG~-~NvA~~la~-LG--~~v~~ig~vG~D~~G~~i~ 126 (352)
T 4e84_A 53 RSRVLVVGDVMLDRYWFGNVDRISPEAPVP--VVHVQRQEERLGGA-ANVARNAVT-LG--GQAGLLCVVGCDEPGERIV 126 (352)
T ss_dssp TCEEEEEECEEEEEEEEEEEEEECSSSSSE--EEEEEEEEEEEEEH-HHHHHHHHH-TT--CEEEEEEEEESSHHHHHHH
T ss_pred CCcEEEECccceEEEEeecccccCCCCCcc--eEEeeEEEEecChH-HHHHHHHHH-cC--CCEEEEEEeCCChhHHHHH
Confidence 46899999999999876 44411 1332 35666788899998 899999998 56 9999999999999999999
Q ss_pred HHHHHcCceeEEeecCCCCceeEEEEEeCCccc-eeecc-cccccCCcccCCCcchhhhhccccEEEEeccccccCHHHH
Q 020650 80 KNSKLAGVNVHYYEDESASTGTCAVCVVGGERS-LVANL-SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI 157 (323)
Q Consensus 80 ~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~ 157 (323)
+.|+++||++..+..++.+|+.++++.+++.+. .+... +.......+.++ ...+.++++|+++++++.. .+.+.+
T Consensus 127 ~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~~~g~~~-~~~~~~ 203 (352)
T 4e84_A 127 ELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLA--RFDVLLPQHDVVLMSDYAK-GGLTHV 203 (352)
T ss_dssp HHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHH--HHHHHGGGCSEEEEECCSS-SSCSSH
T ss_pred HHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHH--HHHHhcccCCEEEEeCCCC-CCHHHH
Confidence 999999999966667777899998888754443 23221 111111111111 1335688999999998652 234458
Q ss_pred HHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcccc-CC
Q 020650 158 QLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASE-IR 236 (323)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~-~~ 236 (323)
..+++.+++.+.++++|+++..| .+++.+|++++|++|++.+++ ...+.++++++++.+ .. .+
T Consensus 204 ~~~~~~a~~~g~~v~~D~~~~~~---------~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l------~~~~g 267 (352)
T 4e84_A 204 TTMIEKARAAGKAVLVDPKGDDW---------ARYRGASLITPNRAELREVVG-QWKSEDDLRARVANL------RAELD 267 (352)
T ss_dssp HHHHHHHHHTTCEEEEECCSSCC---------STTTTCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHH------HHHHT
T ss_pred HHHHHHHHhcCCEEEEECCCcch---------hhccCCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHH------HHHhC
Confidence 88999999999999999976432 578999999999999999987 222234566777777 43 58
Q ss_pred ccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccC
Q 020650 237 KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTY 316 (323)
Q Consensus 237 ~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~ 316 (323)
++.++||+|++|++++++++.+++|++++ +++|||||||+|.|||+++|++|+++++|+++|+++|+++|++.|+.+
T Consensus 268 ~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v---~vvDttGAGDaF~ag~l~~l~~g~~l~~al~~A~aaaa~~v~~~Ga~~ 344 (352)
T 4e84_A 268 IDALLLTRSEEGMTLFSAGGELHAPALAR---EVFDVSGAGDTVIATVATMLGAGVPLVDAVVLANRAAGIVVGKLGTAT 344 (352)
T ss_dssp CSEEEEECGGGCEEEEETTEEEEECCCCS---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSCC
T ss_pred CCEEEEEcCCCcEEEEECCceEEecCCCc---CccCCccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCcc
Confidence 89999999999999999888888887544 799999999999999999999999999999999999999999999988
Q ss_pred CCCCCC
Q 020650 317 PEKPEF 322 (323)
Q Consensus 317 p~~~~~ 322 (323)
|+++|+
T Consensus 345 ~t~~el 350 (352)
T 4e84_A 345 VDYDEL 350 (352)
T ss_dssp CCHHHH
T ss_pred CCHHHh
Confidence 877654
No 32
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=2.8e-44 Score=317.59 Aligned_cols=293 Identities=18% Similarity=0.170 Sum_probs=232.6
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
|.++|+|++++|++..+++ |.+++..+..+....+||++.|+|.+|++ +| .++.++|.+|+ .+|+++++.|++
T Consensus 3 m~i~v~g~~~~D~~~~v~~---~~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~~vG~-~~G~~i~~~L~~ 75 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLDH---LKLDTVNRTSQVTKTPGGKGLNVTRVIHD-LG--GDVIATGVLGG-FHGAFIANELKK 75 (323)
T ss_dssp CEEEEESSCEEEEEEECSC---CCTTSEEEESCEEEEEESHHHHHHHHHHH-HT--CCEEEEEEEEH-HHHHHHHHHHHH
T ss_pred eEEEEecCceeEEEEecCC---cccCCEEEeceEEEcCCcHHHHHHHHHHH-cC--CCeEEEEEecc-chHHHHHHHHHH
Confidence 5899999999999999987 36678888888999999999999999998 66 99999999997 589999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc--chhhhhccccEEEEeccccc-cCHHHHHHHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP--ENWALVEKAKYFYIAGFFLT-VSPDSIQLVA 161 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~i~~~~~~-~~~~~~~~~~ 161 (323)
.||+++++...+ .|++++.+++.++++.+...++ .+++++++.. ...+.++++|+++++++.+. .+.+.+..++
T Consensus 76 ~gV~~~~v~~~~-~t~~~~~~~~~~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 152 (323)
T 2f02_A 76 ANIPQAFTSIKE-ETRDSIAILHEGNQTEILEAGP--TVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELV 152 (323)
T ss_dssp TTCCBCCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTTHHHHHH
T ss_pred CCCceeEEEcCC-CCeeEEEEEcCCCeEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCCCCChHHHHHHH
Confidence 999999986543 4777777666445444333332 3555444320 11134678999999886642 3457889999
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC-CC-CCHHHHHHHHhcCCccccCCccE
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW-ET-DDVEEIALKLSQWPKASEIRKRT 239 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~-~~-~~~~~~~~~l~~~~~~~~~~~~~ 239 (323)
+.+++.+.++++|+.... ..+.+..+ +.+|++++|++|++.+++.... +. +++.++++.+ .+.|++.
T Consensus 153 ~~a~~~g~~v~~Dp~~~~----~~~~l~~~-~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l------~~~g~~~ 221 (323)
T 2f02_A 153 QKAHAQEVKVLLDTSGDS----LRQVLQGP-WKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKP------MFAGIEW 221 (323)
T ss_dssp HHHHHTTCEEEEECCTHH----HHHHHHSS-CCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSG------GGTTCSE
T ss_pred HHHHHCCCEEEEECChHH----HHHHHhcc-CCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHH------HHcCCCE
Confidence 999999999999997543 22222221 6999999999999999874322 22 3455666666 5678999
Q ss_pred EEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCC
Q 020650 240 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEK 319 (323)
Q Consensus 240 vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~ 319 (323)
+++|+|++|++++++++.+++++++ ++++|||||||+|.|+|+++|++|+++++|+++|+++|++++++.|+.+|++
T Consensus 222 vvvt~G~~G~~~~~~~~~~~~~~~~---v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~ 298 (323)
T 2f02_A 222 IVISLGKDGAIAKHHDQFYRVKIPT---IQAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAGMANAQERMTGHVDV 298 (323)
T ss_dssp EEEECGGGCEEEEETTEEEEEECCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSSSSSCCCH
T ss_pred EEEeecCCceEEEeCCCEEEEcCCC---ccccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCcCCCCH
Confidence 9999999999999888888887654 4799999999999999999999999999999999999999999999988876
Q ss_pred CC
Q 020650 320 PE 321 (323)
Q Consensus 320 ~~ 321 (323)
+|
T Consensus 299 ~e 300 (323)
T 2f02_A 299 EN 300 (323)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 33
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=3e-44 Score=315.91 Aligned_cols=284 Identities=19% Similarity=0.229 Sum_probs=230.4
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
++|+|+|++++|++...+ +...+..+....+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 2 ~~v~viG~~~~D~~~~~~-------~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~~vG~D~~g~~i~~~l~~ 71 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSP-------GPLRHVSYFEKHVAGSEANYCVAFIK-QG--NECGIIAKVGDDEFGYNAIEWLRG 71 (311)
T ss_dssp CEEEEESCCEEEEEESSS-------SCGGGCCEEEEEEECHHHHHHHHHHH-TT--CEEEEECEEESSHHHHHHHHHHHH
T ss_pred CCEEEECCceEEEecCCC-------CcccccceeeecCCChHHHHHHHHHH-CC--CceEEEEEeCCCHHHHHHHHHHHH
Confidence 489999999999987332 33455667788999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEee-cCCCCceeEEEEEe-CCc--cceeecc--cccccCCcccCCCcchhhhhccccEEEEeccccc---cCHH
Q 020650 85 AGVNVHYYE-DESASTGTCAVCVV-GGE--RSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPD 155 (323)
Q Consensus 85 ~gi~~~~~~-~~~~~t~~~~~~~~-~g~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~---~~~~ 155 (323)
+||+++++. .++.+|+.+++..+ +|+ |+++.+. ++...++++++.. ..+++++++|++++.+. .+.+
T Consensus 72 ~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~ 147 (311)
T 2dcn_A 72 QGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE----EYVKSADLVHSSGITLAISSTAKE 147 (311)
T ss_dssp TTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH----HHHTTCSEEEEEHHHHHSCHHHHH
T ss_pred cCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcCh----HHHcCCCEEEEeCcccccChHHHH
Confidence 999999986 46678999988876 677 7765442 4556677776653 45789999999987653 2345
Q ss_pred HHHHHHHHHHhCCCeEEEeCC--chhHH-HHHHHHHHhhcC--CCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 156 SIQLVAEHAAANNKVFMMNLS--APFIC-EFFKDALEKVLP--YMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~d~~--~~~~~-~~~~~~~~~~l~--~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
.+.++++.+++. ++|+. ...|. ....+.++.+++ ++|++++|++|++.+++ .++++++++.+
T Consensus 148 ~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l---- 214 (311)
T 2dcn_A 148 AVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILG-----ESDPDKAAKAF---- 214 (311)
T ss_dssp HHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHS-----CCCHHHHHHHH----
T ss_pred HHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhC-----CCCHHHHHHHH----
Confidence 667777776654 56664 33442 223455778899 99999999999999986 35788888888
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhh
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
... .+.+++|+|++|++++++++.+++|++++ +++|||||||+|.|||+++|++|+++++|+++|+++|+++++
T Consensus 215 --~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~ 288 (311)
T 2dcn_A 215 --SDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVM 288 (311)
T ss_dssp --TTT-EEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTT
T ss_pred --HHh-CCEEEEEECCCCcEEEeCCcEEEeCCccc---cccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 556 88999999999999998888888886544 799999999999999999999999999999999999999999
Q ss_pred hcCcc--CCCCCC
Q 020650 311 RSGCT--YPEKPE 321 (323)
Q Consensus 311 ~~G~~--~p~~~~ 321 (323)
+.|+. .|++++
T Consensus 289 ~~G~~~~~~~~~~ 301 (311)
T 2dcn_A 289 IRGDQENLPTTKD 301 (311)
T ss_dssp SSSSSTTCCCHHH
T ss_pred cCCCCCCCCCHHH
Confidence 99985 466544
No 34
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=2.4e-44 Score=317.65 Aligned_cols=288 Identities=20% Similarity=0.220 Sum_probs=235.3
Q ss_pred CCccceEEEeCCceeee-EeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHH
Q 020650 1 MAQEGILLGMGNPLLDI-SSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMK 79 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~-~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~ 79 (323)
|+| .+.|.+++++|+ +..+++ + .+++..+.......+||++.|+|.+|++ +| .++.++|.+|+| +|+.++
T Consensus 1 ~~m--i~tvt~np~iD~~~~~v~~--~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~d-~g~~i~ 71 (320)
T 3ie7_A 1 MSL--IYTITLNPAIDRLLFIRGE--L-EKRKTNRVIKTEFDCGGKGLHVSGVLSK-FG--IKNEALGIAGSD-NLDKLY 71 (320)
T ss_dssp -CC--EEEEESSCEEEEEEEESSS--C-CTTSCCCCSEEEEEEESHHHHHHHHHHH-HT--CCEEEEEEEEST-THHHHH
T ss_pred Cce--EEEEecchHHeeeEEEcCC--c-cCCCeeEeceeeecCCchHHHHHHHHHH-cC--CCeEEEEEecCc-hHHHHH
Confidence 564 789999999999 999998 5 6788889899999999999999999998 66 999999999998 999999
Q ss_pred HHHHHcCceeEEe-ecCCCCceeEEEEEeCCc--cceeecccccccCCcccCCC--cchhhhhccccEEEEecccc-ccC
Q 020650 80 KNSKLAGVNVHYY-EDESASTGTCAVCVVGGE--RSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFL-TVS 153 (323)
Q Consensus 80 ~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~-~~~ 153 (323)
+.|++.||+++++ ...+ +|+.+++++++|+ |+++...+ ..++++++.. ....+.++++++++++|+.+ ..+
T Consensus 72 ~~l~~~gv~~~~v~~~~~-~t~~~~~~~~~g~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 148 (320)
T 3ie7_A 72 AILKEKHINHDFLVEAGT-STRECFVVLSDDTNGSTMIPEAG--FTVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYT 148 (320)
T ss_dssp HHHHHTTCCBCCEEETTC-CCEEEEEEEETTCSCCEEEECCC--CCCCHHHHHHHHHHHHHHCCTTCEEEEESCCCTTCC
T ss_pred HHHHHcCCceEEEEecCC-CCceEEEEEECCCceeEEEeCCC--CCCCHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCC
Confidence 9999999999999 5555 8999998888777 77655444 2445444432 01224578899999998764 345
Q ss_pred HHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcc
Q 020650 154 PDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232 (323)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 232 (323)
.+.+..+++.+++.+.++++|+.... +.+.+. .+|++++|++|++.+++... .+..+.+..+
T Consensus 149 ~~~~~~~~~~a~~~g~~v~~D~~~~~--------l~~~l~~~~dil~~N~~E~~~l~g~~~---~~~~~~~~~~------ 211 (320)
T 3ie7_A 149 LSDFKELLRTVKATGAFLGCDNSGEY--------LNLAVEMGVDFIKPNEDEVIAILDEKT---NSLEENIRTL------ 211 (320)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCHHH--------HHHHHHHCCSEECCBTTGGGGGSCTTC---CCHHHHHHHH------
T ss_pred HHHHHHHHHHHHhcCCEEEEECChHH--------HHHHHhcCCeEEeeCHHHHHHHhCCCc---CCCHHHHHHH------
Confidence 68899999999999999999997432 344444 89999999999999876421 1123333444
Q ss_pred ccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 233 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 233 ~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
... .+.+++|+|++|++++++++.++++++++ +++||+||||+|.|||+++|++|+++++|+++|+++|+++|++.
T Consensus 212 ~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~ 287 (320)
T 3ie7_A 212 AEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKV---QERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASKVMQQ 287 (320)
T ss_dssp TTT-CSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSS
T ss_pred Hhh-CCEEEEEcCCCceEEEeCCcEEEEeCCcc---CCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCc
Confidence 223 88999999999999999998888887544 79999999999999999999999999999999999999999999
Q ss_pred CccCCCCCC
Q 020650 313 GCTYPEKPE 321 (323)
Q Consensus 313 G~~~p~~~~ 321 (323)
|+..|+++|
T Consensus 288 G~~~~~~~e 296 (320)
T 3ie7_A 288 DSSSFDLEA 296 (320)
T ss_dssp SSSCCCHHH
T ss_pred CCCCCCHHH
Confidence 998887755
No 35
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=5.5e-44 Score=319.36 Aligned_cols=299 Identities=16% Similarity=0.162 Sum_probs=218.1
Q ss_pred CccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHH
Q 020650 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKN 81 (323)
Q Consensus 2 ~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~ 81 (323)
+||++|+++|++++|+....+ ....+..+....+||.+.|+|.+|++ +| .++.++|.+|+|.+|+.+++.
T Consensus 22 ~mm~kv~~~GE~m~~l~p~~~-------~~~~~~~~~~~~~GG~~aNvA~~lar-LG--~~~~~ig~vG~D~~G~~l~~~ 91 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLSTQQG-------IPFSQTTALDIHIGGAEANVAVNLSK-LG--HPTRIATVVPANPIGKMAVEH 91 (351)
T ss_dssp ---CEEEEECCCEEEEECCTT-------CCGGGCSEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEECSSHHHHHHHHH
T ss_pred hccCCEEEEcceeEEecCCCC-------CCccccCeEEEecCChHHHHHHHHHH-cC--CCeEEEEEeCCCHHHHHHHHH
Confidence 355699999999999875432 23455667889999999999999998 56 999999999999999999999
Q ss_pred HHHcCceeEEeecCCCCceeEEEEE-eCCccceeeccccc---ccCCcccCCCcchhhhhccccEEEEeccccccCH---
Q 020650 82 SKLAGVNVHYYEDESASTGTCAVCV-VGGERSLVANLSAA---NCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--- 154 (323)
Q Consensus 82 l~~~gi~~~~~~~~~~~t~~~~~~~-~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~--- 154 (323)
|+++||+++++...+.+++.+.+.. +++....+.+.... ..+...++. ..+.+++++++|++++.+..++
T Consensus 92 L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~---~~~~~~~~~~~~~~g~~l~~~~~~~ 168 (351)
T 4gm6_A 92 LWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWD---LSELLKGIRVLHVSGITIALSTFWL 168 (351)
T ss_dssp HHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCC---HHHHHTTEEEEEEEHHHHHHCHHHH
T ss_pred HHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccC---HHHHHhhcccceecccchhhchhHH
Confidence 9999999999865444455544444 33333333332222 123333332 3456889999999998765443
Q ss_pred HHHHHHHHHHHhCCCeEEEeC--CchhHH-HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCc
Q 020650 155 DSIQLVAEHAAANNKVFMMNL--SAPFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 231 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~--~~~~~~-~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~ 231 (323)
+.+.++++.++++|+++++|+ ++..|. +..++.+.++++++|++++|++|+..+++......+..+...+...+..
T Consensus 169 ~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~- 247 (351)
T 4gm6_A 169 EMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTDYYQAMHDKYPNIE- 247 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSCHHHHHHHHCTTCC-
T ss_pred HHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhHHHHHHHhhhhhhh-
Confidence 678899999999999988877 455564 3356667889999999999999999998754332222333333332110
Q ss_pred cccCCccEEEEeeCC--CceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHh
Q 020650 232 ASEIRKRTAVITQGA--DPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 232 ~~~~~~~~vvit~G~--~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~ 309 (323)
...+.+..+++.+. .++.++..++.++.+++++ .+++|||||||+|.|||+++|++|+++++|+++|+++|+++|
T Consensus 248 -~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~VvDttGAGDaF~ag~l~~l~~g~~~~~al~~A~aaaal~v 324 (351)
T 4gm6_A 248 -LFYATKRTVISASHHLLQGHLWTQGECWESEEYAI--YPIVDRVGGGDAYTAAVLHGILSEWRPDETVKFATAAAGLKH 324 (351)
T ss_dssp -EEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE--CSCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred -hhhccccceeeeccCCceEEEEeCCceEEeCCCCC--CCcCCCCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHh
Confidence 11233444555444 4567778888877776543 379999999999999999999999999999999999999999
Q ss_pred hhcCccCC
Q 020650 310 QRSGCTYP 317 (323)
Q Consensus 310 ~~~G~~~p 317 (323)
++.|+.+|
T Consensus 325 ~~~Ga~~~ 332 (351)
T 4gm6_A 325 SIHGDINP 332 (351)
T ss_dssp TSSSSSCC
T ss_pred CCCCCCCC
Confidence 99998544
No 36
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=2.4e-44 Score=319.83 Aligned_cols=285 Identities=20% Similarity=0.299 Sum_probs=223.3
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKK 80 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~ 80 (323)
|+++++|+|+|++++|++.... ......+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++
T Consensus 21 ~~~m~~ilviG~~~~D~~~~~~-------------~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~G~~i~~ 84 (339)
T 1tyy_A 21 MKAMNKVWVIGDASVDLVPEKQ-------------NSYLKCPGGASANVGVCVAR-LG--GECGFIGCLGDDDAGRFLRQ 84 (339)
T ss_dssp ----CCEEEESCCEEEEEECSS-------------SEEEEEEECHHHHHHHHHHH-TT--CCEEEEEEECSSHHHHHHHH
T ss_pred ccccCCEEEECcceeEEeccCC-------------CceEEcCCCHHHHHHHHHHH-cC--CCeEEEEeeCCCHHHHHHHH
Confidence 4444589999999999998631 23567899999999999998 56 99999999999999999999
Q ss_pred HHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEecccc--ccCH
Q 020650 81 NSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFL--TVSP 154 (323)
Q Consensus 81 ~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~--~~~~ 154 (323)
.|++.||+++++. .++.+|+.+++.++ +|+|++..+. +++..++++.. +.++++++++++++.+ ..+.
T Consensus 85 ~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~------~~l~~~~~v~~~~~~l~~~~~~ 158 (339)
T 1tyy_A 85 VFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDL------PPFRQYEWFYFSSIGLTDRPAR 158 (339)
T ss_dssp HHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGC------CCCCTTCEEEEEHHHHSSHHHH
T ss_pred HHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcchh------hHhccCCEEEEcchhhcCcccH
Confidence 9999999999986 46678999988776 6888765543 44445544422 3367899999998653 2334
Q ss_pred HHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 155 DSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~~--~~~~--~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
+.+..+++.+++.+.++++|+.. ..|. ....+.++++++.+|++++|++|++.+++. ++++++++.+
T Consensus 159 ~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----~~~~~~~~~l---- 229 (339)
T 1tyy_A 159 EACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGA-----SHWQDARYYL---- 229 (339)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCC-----SSGGGGSSTT----
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----CCHHHHHHHH----
Confidence 67888999999999999999853 2221 123455678889999999999999999873 3555666666
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC-----CCHHHHHHHHhHHH
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE-----KPIEECVRAGCYTS 305 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g-----~~~~~a~~~A~~~A 305 (323)
.+.+++.+++|+|++|++++++++.+++|+++ ++++|||||||+|.|+|+++|++| +++++|+++|+++|
T Consensus 230 --~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~---v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~l~~a~~~A~a~a 304 (339)
T 1tyy_A 230 --RDLGCDTTIISLGADGALLITAEGEFHFPAPR---VDVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAISNANACG 304 (339)
T ss_dssp --GGGTCSCEEEECGGGCEEEESSSCEEEECCCC---CCCSCCTTHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHH
T ss_pred --HHcCCCEEEEEECCCceEEEeCCceEEcCCCC---CCcCCCCCchHHHHHHHHHHHHhccccccccHHHHHHHHHHHH
Confidence 56688999999999999999877778887654 479999999999999999999997 89999999999999
Q ss_pred HHHhhhcCcc--CCCCCC
Q 020650 306 HVIIQRSGCT--YPEKPE 321 (323)
Q Consensus 306 a~~~~~~G~~--~p~~~~ 321 (323)
++++++.|+. +|+.+|
T Consensus 305 a~~v~~~G~~~~~p~~~e 322 (339)
T 1tyy_A 305 AMAVTAKGAMTALPFPDQ 322 (339)
T ss_dssp HHGGGSSSTTTTCCCHHH
T ss_pred HHHhCCCCCCCCCCCHHH
Confidence 9999999984 466543
No 37
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=6.6e-44 Score=313.43 Aligned_cols=287 Identities=17% Similarity=0.168 Sum_probs=225.5
Q ss_pred EE-EeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 7 LL-GMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 7 i~-viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
|+ |.|++++|++..+++ + .+++..+..+....+||++.|+|.++++ +| .++.++|.+|+| +|+++++.|+++
T Consensus 4 I~~v~g~~~~D~~~~~~~--~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~d-~g~~i~~~l~~~ 76 (309)
T 3cqd_A 4 IYTLTLAPSLDSATITPQ--I-YPEGKLRCTAPVFEPGGGGINVARAIAH-LG--GSATAIFPAGGA-TGEHLVSLLADE 76 (309)
T ss_dssp EEEECSSCEEEEEEEESC--C-CSSSEEECCCCEEEEESHHHHHHHHHHH-TT--CCEEEEEEECHH-HHHHHHHHHHHT
T ss_pred EEEEeccchheEEEEcCC--C-cCCCeeeccceeecCCchHHHHHHHHHH-cC--CCeEEEEEecCc-hHHHHHHHHHHc
Confidence 55 667999999999987 3 5677888888999999999999999998 56 999999999998 899999999999
Q ss_pred CceeEEeecCCCCceeEEEE-Ee-CCccceeecccccccCCcccCCC--cchhhhhccccEEEEecccc-ccCHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVC-VV-GGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAGFFL-TVSPDSIQLV 160 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~ 160 (323)
||+++++...+ .|++++.+ ++ +|+++++...++ .+++++++. ....+.+++ +++|++|+.+ ..+.+.+..+
T Consensus 77 gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~ 152 (309)
T 3cqd_A 77 NVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG-AILVISGSLPPGVKLEKLTQL 152 (309)
T ss_dssp TCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHHTSCTT-CEEEEESCCCTTCCHHHHHHH
T ss_pred CCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhcC-CEEEEECCCCCCCCHHHHHHH
Confidence 99999986543 36666665 55 577655544443 344443321 001123567 9999998654 2346788999
Q ss_pred HHHHHhCCCeEEEeCCchhHHHHHHHHHHh-hcCCC-cEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCC-c
Q 020650 161 AEHAAANNKVFMMNLSAPFICEFFKDALEK-VLPYM-DYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR-K 237 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~l~~~-dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~ 237 (323)
++.+++.+.++++|+.... +.. +.+.+ |++++|++|++.+++....+.+++.++++.+ ...| +
T Consensus 153 ~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~ 218 (309)
T 3cqd_A 153 ISAAQKQGIRCIVDSSGEA--------LSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEI------VNSGKA 218 (309)
T ss_dssp HHHHHTTTCEEEEECCHHH--------HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHH------HHTTSB
T ss_pred HHHHHHcCCeEEEECChHH--------HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCC
Confidence 9999999999999997432 333 34788 9999999999999885444445677888888 5667 8
Q ss_pred cEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCC
Q 020650 238 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 317 (323)
Q Consensus 238 ~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p 317 (323)
+.+++|+|++|++++++++.+++|+++ ++++|||||||+|.|+|+++|++|+++++|+++|+++|+.++++.|+.+|
T Consensus 219 ~~vvvt~G~~G~~~~~~~~~~~~~~~~---v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~~~~~G~~~~ 295 (309)
T 3cqd_A 219 KRVVVSLGPQGALGVDSENCIQVVPPP---VKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLC 295 (309)
T ss_dssp SCEEEECGGGCEEEECSSCEEEECCCS---CCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTC-----CC
T ss_pred CEEEEEecCCceEEEECCceEEEeCCc---cccCCCcCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCcCCCCC
Confidence 999999999999998877777777644 47999999999999999999999999999999999999999999999888
Q ss_pred CCCC
Q 020650 318 EKPE 321 (323)
Q Consensus 318 ~~~~ 321 (323)
+++|
T Consensus 296 ~~~~ 299 (309)
T 3cqd_A 296 SHDD 299 (309)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 7654
No 38
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=3.3e-43 Score=308.92 Aligned_cols=282 Identities=21% Similarity=0.272 Sum_probs=227.5
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
|+|+|+|++++|++...+ +...+..+....+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 2 ~~i~viG~~~~D~~~~~~-------~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~~vG~D~~g~~i~~~L~~ 71 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEP-------GHLRGKRLLEVYVGGAEVNVAVALAR-LG--VKVGFVGRVGEDELGAMVEERLRA 71 (309)
T ss_dssp CSEEEESCCEEEEECSSS-------SCGGGCCEEEEEEECHHHHHHHHHHH-HT--CCEEEEEEECSSHHHHHHHHHHHH
T ss_pred CcEEEEccceEEEecCCC-------CcccchheeeeecCcHHHHHHHHHHH-cC--CCeEEEEEeCCCHHHHHHHHHHHH
Confidence 379999999999985322 23455566788999999999999998 66 999999999999999999999999
Q ss_pred cCceeEEee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccccEEEEeccccc---cCHHHH
Q 020650 85 AGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSI 157 (323)
Q Consensus 85 ~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~---~~~~~~ 157 (323)
.||+++++. .++ +|+.+++..+ +|+|++..+. ++...++++++.. ..+++++++|++++.+. .+.+.+
T Consensus 72 ~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v~~~g~~~~~~~~~~~~~ 146 (309)
T 1v1a_A 72 EGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP----DYLEGVRFLHLSGITPALSPEARAFS 146 (309)
T ss_dssp HTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG----GGGTTCSEEEEETTGGGSCHHHHHHH
T ss_pred cCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCCh----hHhcCCCEEEEeCchhccCchHHHHH
Confidence 999999986 456 8999988775 6777765443 4555677766653 45788999999998753 234678
Q ss_pred HHHHHHHHhCCCeEEEeCCc--hhHH-HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcccc
Q 020650 158 QLVAEHAAANNKVFMMNLSA--PFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASE 234 (323)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~--~~~~-~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 234 (323)
..+++.+++.+.++++|+.. ..|. ....+.++++++++|++++|++|++.+++.. +++++ .
T Consensus 147 ~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~-------~~~~~---------~ 210 (309)
T 1v1a_A 147 LWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRV-------EEALR---------A 210 (309)
T ss_dssp HHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH-------HHHHH---------H
T ss_pred HHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH-------HHHHH---------h
Confidence 88999999999999999864 2332 2234567789999999999999999998631 34433 1
Q ss_pred CCccEEEEeeCCCceEEeeC-CeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcC
Q 020650 235 IRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313 (323)
Q Consensus 235 ~~~~~vvit~G~~G~~~~~~-~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G 313 (323)
.+++.+++|+|++|+++ ++ ++.+++|+++ ++++|||||||+|.|+|+++|++|+++++|+++|+++|++++++.|
T Consensus 211 ~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~---v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G 286 (309)
T 1v1a_A 211 LSAPEVVLKRGAKGAWA-FVDGRRVEGSAFA---VEAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRG 286 (309)
T ss_dssp TCCSEEEEECGGGCEEE-EETTEEEECCCCC---CCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSST
T ss_pred cCCCEEEEEecCCCeeE-ecCCcEEEeCCCC---CCcCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCC
Confidence 36889999999999998 55 6677777654 3789999999999999999999999999999999999999999999
Q ss_pred cc--CCCCCC
Q 020650 314 CT--YPEKPE 321 (323)
Q Consensus 314 ~~--~p~~~~ 321 (323)
+. .|++++
T Consensus 287 ~~~~~~~~~~ 296 (309)
T 1v1a_A 287 DHEGAPYRED 296 (309)
T ss_dssp TTTTCCCHHH
T ss_pred CCcCCCCHHH
Confidence 85 466544
No 39
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=2e-44 Score=319.41 Aligned_cols=289 Identities=15% Similarity=0.143 Sum_probs=231.6
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhc---CCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASK---YNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKN 81 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~---~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~ 81 (323)
|.|+|+|++++|++..+++ |.+++.... .+....+||++.|+|.+|++ +| .++.++|.+|+| +|+++++.
T Consensus 13 ~~~~v~G~~~vD~~~~~~~---~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~~vG~d-~G~~i~~~ 85 (331)
T 2ajr_A 13 MVLTVTLNPALDREIFIED---FQVNRLYRINDLSKTQMSPGGKGINVSIALSK-LG--VPSVATGFVGGY-MGKILVEE 85 (331)
T ss_dssp CEEEEESSCEEEEEEECTT---CCSSCEEECCSGGGEEEEEESHHHHHHHHHHH-TT--CCEEEEEEEEHH-HHHHHHHH
T ss_pred eEEEEecchHHeEEEEcCC---ccCCceEEeccccceEEecCcHHHHHHHHHHH-cC--CCeEEEEEecCc-hHHHHHHH
Confidence 6899999999999999987 356777777 78889999999999999998 56 999999999998 99999999
Q ss_pred HHHcC--ceeEEeecCCCCceeEEEEEe-CCcc-ceeecccccccCCcccCCCc--chhhhhccccEEEEecccc-ccCH
Q 020650 82 SKLAG--VNVHYYEDESASTGTCAVCVV-GGER-SLVANLSAANCYKSEHLKKP--ENWALVEKAKYFYIAGFFL-TVSP 154 (323)
Q Consensus 82 l~~~g--i~~~~~~~~~~~t~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~i~~~~~-~~~~ 154 (323)
|+++| |+++++...+ .|++++++++ +|++ +.+...++ .+++++++.. ...+.+.++++++++|+.+ ..+.
T Consensus 86 L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 162 (331)
T 2ajr_A 86 LRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNE 162 (331)
T ss_dssp HHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHHHHHHTTCSEEEEESCCCTTSCT
T ss_pred HHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHHHHhcccCCEEEEECCCCCCCCH
Confidence 99999 9999986544 4777777776 5777 44444333 3444443220 0123467899999997653 3345
Q ss_pred HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc---CCCcEEEeCHHH-HHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 155 DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL---PYMDYIFGNETE-ARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~e-~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
+.+..+++.+++.+.++++|+.... +..++ +.+|++++|++| ++.+++....+.++++++++.+
T Consensus 163 ~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l---- 230 (331)
T 2ajr_A 163 GICNELVRLARERGVFVFVEQTPRL--------LERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKL---- 230 (331)
T ss_dssp THHHHHHHHHHHTTCEEEEECCHHH--------HHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHcCCEEEEECChHH--------HHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHH----
Confidence 7889999999999999999997532 33334 459999999999 9988764332223566777777
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCeeeEEe-ceeCCCCcccCCCCcchHHHHHHHHHhh-cCCCHHHHHHHHhHHHHHH
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGKLKKFP-VIVLPKDKLVDTNGAGDAFVGGFLSQLV-QEKPIEECVRAGCYTSHVI 308 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~-~~~~~~~~~~d~tGAGDaf~ag~~~~l~-~g~~~~~a~~~A~~~Aa~~ 308 (323)
.+. .+.+++|+|++|++++++++.++++ +++ ++++|||||||+|.|||+++|+ +|+++++|+++|+++|+++
T Consensus 231 --~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~---v~vvDttGAGDaF~ag~l~~l~~~g~~~~~al~~A~a~aa~~ 304 (331)
T 2ajr_A 231 --AEK-SQVSVVSYEVKNDIVATREGVWLIRSKEE---IDTSHLLGAGDAYVAGMVYYFIKHGANFLEMAKFGFASALAA 304 (331)
T ss_dssp --HHH-SSEEEEEETTTEEEEECSSCEEEEEESSC---CCGGGCTTHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred --HHh-cCEEEEeecCCceEEEeCCcEEEEecCCc---ccccCCCchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 455 8899999999999999877777777 644 4799999999999999999999 9999999999999999999
Q ss_pred hhhcCccCCCCCC
Q 020650 309 IQRSGCTYPEKPE 321 (323)
Q Consensus 309 ~~~~G~~~p~~~~ 321 (323)
+++.|+.+|+++|
T Consensus 305 v~~~G~~~~~~~e 317 (331)
T 2ajr_A 305 TRRKEKYMPDLEA 317 (331)
T ss_dssp TTSSSCCCCCHHH
T ss_pred HcCcCcCCCCHHH
Confidence 9999998887654
No 40
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=4.9e-43 Score=308.31 Aligned_cols=281 Identities=21% Similarity=0.291 Sum_probs=230.4
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
|+|+|+|++++|++...+ +...+.......+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 2 ~~v~viG~~~iD~~~~~~-------g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~ig~vG~D~~g~~i~~~l~~ 71 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEE-------GDLKDVRLFEKHPGGAPANVAVGVSR-LG--VKSSLISKVGNDPFGEYLIEELSK 71 (313)
T ss_dssp CEEEEESCCEEEEEESSS-------SCTTTCCEEEEEEECHHHHHHHHHHH-TT--CEEEEEEEEESSHHHHHHHHHHHH
T ss_pred CcEEEECceeeeeecCCC-------CCcccccceeecCCCHHHHHHHHHHH-CC--CCeEEEEEeCCCHHHHHHHHHHHH
Confidence 479999999999997643 34556677889999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEee-cCCCCceeEEEEEeCCccceeeccc-ccccCCcccCCCcchhhhhccccEEEEeccccc--cCHHHHHHH
Q 020650 85 AGVNVHYYE-DESASTGTCAVCVVGGERSLVANLS-AANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQLV 160 (323)
Q Consensus 85 ~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~~~~~~~ 160 (323)
.||+++++. .++.+|+.+++..++|+|+++.+.+ +...++++++. .+.+++++++|++++.+. .+.+.+..+
T Consensus 72 ~gv~~~~v~~~~~~~T~~~~~~~~~g~~~~~~~~~~a~~~l~~~~~~----~~~l~~~~~~~~~g~~~~~~~~~~~~~~~ 147 (313)
T 3ewm_A 72 ENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDDVAYFNMTLNDIN----WDIVEEAKIVNFGSVILARNPSRETVMKV 147 (313)
T ss_dssp TTCBCTTEEEESSSCCEEEEEECSSSSCEEEECCSSGGGCCCGGGCC----HHHHHHCSEEEEESGGGGSTTHHHHHHHH
T ss_pred cCCCccceeecCCCCceEEEEEecCCCcceEeeccCHHHhCChhhCC----HHHhCCCCEEEEcCcccCCcchHHHHHHH
Confidence 999999985 5778899998877678888877665 34567777765 256788999999997642 345778889
Q ss_pred HHHHHhCCCeEEEeCCc--hhHH---HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccC
Q 020650 161 AEHAAANNKVFMMNLSA--PFIC---EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 235 (323)
Q Consensus 161 ~~~~~~~~~~~~~d~~~--~~~~---~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (323)
++.++ .+.++++|+.. ..|. ....+.++++++.+|++++|++|++.+++.. . ...
T Consensus 148 ~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~-------------~------~~~ 207 (313)
T 3ewm_A 148 IKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQG-------------V------EVK 207 (313)
T ss_dssp HHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTT-------------C------CCC
T ss_pred HHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccC-------------c------ccc
Confidence 98887 46888899854 2332 2344567888999999999999999886521 0 112
Q ss_pred CccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhh--cCCCHHHHHHHHhHHHHHHhhhcC
Q 020650 236 RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV--QEKPIEECVRAGCYTSHVIIQRSG 313 (323)
Q Consensus 236 ~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~--~g~~~~~a~~~A~~~Aa~~~~~~G 313 (323)
+.+.++||+|++|++++++++.+++|++++ +++|||||||+|.|+|+++|+ +|+++++|+++|+++|+++|++.|
T Consensus 208 ~~~~vviT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~l~~~~g~~l~~a~~~A~~~aa~~v~~~G 284 (313)
T 3ewm_A 208 GSMLTAITLGPKGCRLIKNETVVDVPSYNV---NPLDTTGAGDAFMAALLVGILKLKGLDLLKLGKFANLVAALSTQKRG 284 (313)
T ss_dssp CSSEEEEECGGGEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHTTSCS
T ss_pred CceEEEEEECCCCeEEEECCeeEEcCCCCc---ccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHccCC
Confidence 356689999999999999888888886544 799999999999999999998 999999999999999999999999
Q ss_pred c-cCCCCCCC
Q 020650 314 C-TYPEKPEF 322 (323)
Q Consensus 314 ~-~~p~~~~~ 322 (323)
+ .+|+++|+
T Consensus 285 ~~~~p~~~ev 294 (313)
T 3ewm_A 285 AWSTPRKDEL 294 (313)
T ss_dssp SCCCCCHHHH
T ss_pred CCCCCCHHHH
Confidence 8 56776543
No 41
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=5e-43 Score=307.97 Aligned_cols=280 Identities=20% Similarity=0.265 Sum_probs=227.5
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
+++|+|+|++++|++..+++ +|.+++..+..+....+||++.|+|.+|++ +| .++.++|.+|+|.+|+++++.|+
T Consensus 17 ~~~i~viG~~~iD~~~~~~~--~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~v~~ig~vG~D~~G~~l~~~L~ 91 (312)
T 2hlz_A 17 GSQILCVGLVVLDVISLVDK--YPKEDSEIRCLSQRWQRGGNASNSCTILSL-LG--APCAFMGSMAPGHVADFVLDDLR 91 (312)
T ss_dssp CCEEEEESCCEEEEEEEESS--CCCTTCEEECSEEEEEEESHHHHHHHHHHH-HT--CCEEEEEEECSSHHHHHHHHHHH
T ss_pred CCcEEEECcceEEEeecccc--CCCccceeecccceeccCccHHHHHHHHHH-cC--CceEEEEEecCchHHHHHHHHHH
Confidence 46899999999999999887 666666666666778999999999999998 66 99999999999999999999999
Q ss_pred HcCceeEEeec-CCCCceeEEEEEe--CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHH
Q 020650 84 LAGVNVHYYED-ESASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV 160 (323)
Q Consensus 84 ~~gi~~~~~~~-~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~ 160 (323)
++||+++++.. ++.+|++++++++ +|+|+++.+.++...+++++++. ..+++++++|++++ .++....+
T Consensus 92 ~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~~v~~~~~----~~~~~~~~ 163 (312)
T 2hlz_A 92 RYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEK----VDLTQFKWIHIEGR----NASEQVKM 163 (312)
T ss_dssp HTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHT----SCGGGEEEEEEECS----SHHHHHHH
T ss_pred HcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhH----hhhccCCEEEEecc----CHHHHHHH
Confidence 99999998754 4567888777664 58888877766666666665543 24678999999985 35666777
Q ss_pred HHHHHhC--------CCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcc
Q 020650 161 AEHAAAN--------NKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232 (323)
Q Consensus 161 ~~~~~~~--------~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 232 (323)
++.+++. +.++++|+.... +.++++++++|++++|++|++.+ + .++++++++.+.++
T Consensus 164 ~~~a~~~~~~~~~~~~~~v~~d~~~~~------~~~~~~l~~~dil~~n~~ea~~l-g-----~~~~~~~~~~l~~~--- 228 (312)
T 2hlz_A 164 LQRIDAHNTRQPPEQKIRVSVEVEKPR------EELFQLFGYGDVVFVSKDVAKHL-G-----FQSAEEALRGLYGR--- 228 (312)
T ss_dssp HHHHHHHHTTSCGGGCCEEEEEECSCC------GGGGGGGGSSSEEEECHHHHHHT-T-----CCSHHHHHHHHGGG---
T ss_pred HHHHHHhcccccCCCCeEEEEEcccch------HHHHHHHhcCCEEEEcHHHHHHc-C-----CCCHHHHHHHHHHh---
Confidence 7777765 678889986532 33667899999999999999886 3 24678888877332
Q ss_pred ccCCccEEEEeeCCCceEEeeC-CeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhh
Q 020650 233 SEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 311 (323)
Q Consensus 233 ~~~~~~~vvit~G~~G~~~~~~-~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~ 311 (323)
...| +.+++|+|++|++++++ ++.+++|++ +.++++||+||||+|.|+|+++|++|+++++|+++|+++|++++++
T Consensus 229 ~~~g-~~vvvt~G~~G~~~~~~~~~~~~~~~~--~~~~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~ 305 (312)
T 2hlz_A 229 VRKG-AVLVCAWAEEGADALGPDGKLLHSDAF--PPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGL 305 (312)
T ss_dssp SCTT-CEEEEECGGGCEEEECTTCCEEEECCC--CCSSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS
T ss_pred cCCC-CEEEEEecccCeEEEccCCCEEECCCC--CCCCcccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhh
Confidence 1123 89999999999999874 456777753 2347899999999999999999999999999999999999999999
Q ss_pred cCc
Q 020650 312 SGC 314 (323)
Q Consensus 312 ~G~ 314 (323)
.|+
T Consensus 306 ~G~ 308 (312)
T 2hlz_A 306 QGF 308 (312)
T ss_dssp SSS
T ss_pred cCc
Confidence 997
No 42
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=1.3e-42 Score=306.99 Aligned_cols=282 Identities=17% Similarity=0.233 Sum_probs=225.2
Q ss_pred eEEEeCCceeeeEeec----------ChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeec-Cch
Q 020650 6 ILLGMGNPLLDISSVV----------DDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGK-DKF 74 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~----------~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~-D~~ 74 (323)
+|+|+|++++|++..+ ++ .|..++..........+||++.|+|.+|++ +| .++.++|.+|+ | +
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~--~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~~D-~ 75 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHILPDQ--VHLINLSFLVPTMRREFGGCAGNIAYALNL-LG--GDARMMGTLGAVD-A 75 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGCCTTS--SSSCEEEEECCSCCCEEECHHHHHHHHHHH-TT--CCEEEEEEEETTT-C
T ss_pred cEEEECcceEEEEEecchhhhhhccccc--cCCCCcceecccceeccCCHHHHHHHHHHH-cC--CCeeEEEEECCcC-H
Confidence 6999999999999988 55 555555555567788999999999999998 56 99999999999 9 8
Q ss_pred hHHHHHHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEecccccc
Q 020650 75 GEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTV 152 (323)
Q Consensus 75 g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~ 152 (323)
|+ +++.|++.||+++++. .++.+|+.+++.++ +|++.+..+.++...+.++++.. .++++++++++.
T Consensus 76 g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~------~~~~~~v~~~~~---- 144 (326)
T 3b1n_A 76 QP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGE------AKDIKLAIVGPD---- 144 (326)
T ss_dssp HH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGG------CCSCSEEEECSC----
T ss_pred HH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhccc------ccCCCEEEECCc----
Confidence 88 9999999999999986 46678999988886 56776655566655555554432 278999999863
Q ss_pred CHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcc
Q 020650 153 SPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 232 (323)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 232 (323)
.++.+.++++.+++.+.++++|+...... ...+.++.+++++|++++|++|++.+++.... +.++ +
T Consensus 145 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~---~~~~----l------ 210 (326)
T 3b1n_A 145 GFQGMVQHTEELAQAGVPFIFDPGQGLPL-FDGATLRRSIELATYIAVNDYEAKLVCDKTGW---SEDE----I------ 210 (326)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECCGGGGGG-CCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCC---CHHH----H------
T ss_pred cHHHHHHHHHHHHHCCCEEEEeCchhhhh-ccHHHHHHHHHhCCEEecCHHHHHHHhCCCCC---CHHH----H------
Confidence 35778888999999999999998642210 02344677888999999999999999875432 3333 2
Q ss_pred ccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 233 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 233 ~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
.+ ..+.+++|+|++|++++++++.+++|+++++ .++|||||||+|.|||+++|++|+++++|+++|+++|++++++.
T Consensus 211 ~~-~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~aa~~v~~~ 287 (326)
T 3b1n_A 211 AS-RVQALIITRGEHGATIRHRDGTEQIPAVRAE--RVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLMGALKIAHQ 287 (326)
T ss_dssp HT-TSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSS
T ss_pred Hh-cCCEEEEecCCCceEEEECCcEEEeCCCCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC
Confidence 12 2688999999999999988888888765431 37899999999999999999999999999999999999999999
Q ss_pred Ccc--CCCCCC
Q 020650 313 GCT--YPEKPE 321 (323)
Q Consensus 313 G~~--~p~~~~ 321 (323)
|+. .|+.+|
T Consensus 288 G~~~~~~~~~e 298 (326)
T 3b1n_A 288 GPQTYAPTRAE 298 (326)
T ss_dssp STTCCCCCHHH
T ss_pred CCCCCCCCHHH
Confidence 985 455443
No 43
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=8.8e-43 Score=305.79 Aligned_cols=286 Identities=19% Similarity=0.217 Sum_probs=230.8
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
-++|.|++++|++..+++ + .++...+.......+||++.|+|.++++ +| .++.++|.+|+ .+|+.+++.|++.
T Consensus 2 i~tv~~n~~~D~~~~~~~--~-~~g~~~~~~~~~~~~GG~~~N~A~~la~-LG--~~~~~~~~vG~-~~g~~i~~~L~~~ 74 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQVEN--F-QQGVVNRSERDRKQPGGKGINVSRVLKR-LG--HETKALGFLGG-FTGAYVRNALEKE 74 (306)
T ss_dssp EEEEESSCEEEEEEECTT--C-CSSSEEECSEEEEEEECHHHHHHHHHHH-TT--CCCEEEEEEEH-HHHHHHHHHHHHT
T ss_pred EEEEecCchheEEEEcCC--c-ccCCeEEeceeEecCCchHHHHHHHHHH-cC--CCceEEEEecc-hhHHHHHHHHHHc
Confidence 578899999999999998 4 5677788888889999999999999998 56 99999999998 7999999999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc-chhhhhccccEEEEecccc-ccCHHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP-ENWALVEKAKYFYIAGFFL-TVSPDSIQLVAEH 163 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~ 163 (323)
||+++++...+ .|+.++++ .+|+|+.+...++ .+++++++.. +....++++|++|++++.+ ..+.+.+.++++.
T Consensus 75 gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~ 150 (306)
T 2abq_A 75 EIGLSFIEVEG-DTRINVKI-KGKQETELNGTAP--LIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQI 150 (306)
T ss_dssp TCEECCEEESS-CCEEEEEE-ESSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHH
T ss_pred CCceEEEEcCC-CCceEEEE-eCCceEEEECCCC--CCCHHHHHHHHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHHH
Confidence 99999986543 47777665 6777765443332 3444443220 0111157899999988654 2455788999999
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEE
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI 242 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvi 242 (323)
+++++.++++|+... .+.++++ ++|++++|.+|++.+++....+.+++.++++.+ .+.+.+.+++
T Consensus 151 a~~~g~~v~~D~~~~--------~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~~vvv 216 (306)
T 2abq_A 151 AKERGAFVAVDTSGE--------ALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRL------IGEGIESILV 216 (306)
T ss_dssp HHTTTCEEEEECCHH--------HHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHH------HHTTCCEEEE
T ss_pred HHhcCCEEEEECChH--------HHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEE
Confidence 999999999999742 2567888 999999999999999875433234566777777 5668899999
Q ss_pred eeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCCCC
Q 020650 243 TQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPE 321 (323)
Q Consensus 243 t~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~~~ 321 (323)
|+|++|++++++++.+++|+++ ++++|||||||+|.|||+++|++|+++++|+++|+++|++++++. .+|+++|
T Consensus 217 t~G~~G~~~~~~~~~~~~~~~~---v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~aa~~v~~~--~~p~~~e 290 (306)
T 2abq_A 217 SFAGDGALFASAEGMFHVNVPS---GEVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSATAFSD--GFCTREE 290 (306)
T ss_dssp ECGGGCEEEEETTEEEEECCCC---CCCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSS--SCCCHHH
T ss_pred ecCCCceEEEeCCCEEEEeCCC---ccccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCc--CCCCHHH
Confidence 9999999999888877877644 479999999999999999999999999999999999999999998 5566544
No 44
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=2.1e-42 Score=302.09 Aligned_cols=277 Identities=19% Similarity=0.235 Sum_probs=218.7
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
+++|+|+|++++|++. . ...+||++.|+|.++++ +| .++.++|.+|+|.+|+.+++.|+
T Consensus 3 ~~~v~viG~~~~D~~p---~---------------~~~~GG~~~N~A~~la~-LG--~~~~~~~~vG~D~~g~~~~~~l~ 61 (296)
T 2qhp_A 3 NNIIVGMGEALWDVLP---E---------------GKKIGGAPANFAYHVSQ-FG--FDSRVVSAVGNDELGDEIMEVFK 61 (296)
T ss_dssp CCEEEEESCCEEEEET---T---------------EEEEECHHHHHHHHHHH-TT--CEEEEEEEEESSHHHHHHHHHHH
T ss_pred cceEEEEchhheEecC---C---------------CCCCCCHHHHHHHHHHH-cC--CCeeEEEEeCCChHHHHHHHHHH
Confidence 3589999999999971 1 36799999999999998 56 99999999999999999999999
Q ss_pred HcCceeEEee-cCCCCceeEEEEEe-CCccceeecccc-cccCCcccCCCcchhhhhccccEEEEeccccc--cCHHHHH
Q 020650 84 LAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSA-ANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQ 158 (323)
Q Consensus 84 ~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~--~~~~~~~ 158 (323)
++|| +++. .++.+|+++++.++ +|+|++....+. ...+.+. +...+.++++|++|++++.+. .+.+.+.
T Consensus 62 ~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~ 135 (296)
T 2qhp_A 62 EKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFT----DELKRLALNTRAVCFGSLAQRNEVSRATIN 135 (296)
T ss_dssp HTTC--CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCC----HHHHHHHHTEEEEEECSGGGSSHHHHHHHH
T ss_pred HcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcc----hhhHhhhcCCCEEEECChHhcChHHHHHHH
Confidence 9999 6664 45678999888776 688776555443 2233221 123456789999999875432 2346777
Q ss_pred HHHHHHHh-CCCeEEEeCCc--hhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCcccc-
Q 020650 159 LVAEHAAA-NNKVFMMNLSA--PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASE- 234 (323)
Q Consensus 159 ~~~~~~~~-~~~~~~~d~~~--~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~- 234 (323)
.+++.+++ .+.++++|+.. ..|. .+.++++++++|++++|++|++.+++....+.++++++++.+ ..
T Consensus 136 ~~~~~a~~~~~~~v~~D~~~~~~~~~---~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~ 206 (296)
T 2qhp_A 136 RFLDTMPDIDGQLKIFDINLRQDFYT---KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWIL------LAK 206 (296)
T ss_dssp HHHHHSCCTTSCEEEEECCCCTTCCC---HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHH------HHH
T ss_pred HHHHHHHhcCCCEEEEECcCCccccC---HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHH------HHh
Confidence 88888876 68888888843 2231 345677888999999999999999987655556788888888 44
Q ss_pred CCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCc
Q 020650 235 IRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 314 (323)
Q Consensus 235 ~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~ 314 (323)
.+++.+++|+|++|++++++++.++++++++ +++||+||||+|.|+|+++|++|+++++|+++|+++|+.++++.|+
T Consensus 207 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~ 283 (296)
T 2qhp_A 207 YNLKMLILTCGINGSYVFTPGVVSFQETPKV---PVADTVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGA 283 (296)
T ss_dssp TTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSSSS
T ss_pred cCCCEEEEeecCCCeEEEECCeEEEeCCCCC---ccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 3889999999999999998888888876543 7899999999999999999999999999999999999999999999
Q ss_pred cCCCC
Q 020650 315 TYPEK 319 (323)
Q Consensus 315 ~~p~~ 319 (323)
..+.+
T Consensus 284 ~~~~~ 288 (296)
T 2qhp_A 284 MPELP 288 (296)
T ss_dssp SCCCC
T ss_pred CCCCc
Confidence 75543
No 45
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=1.5e-42 Score=307.79 Aligned_cols=285 Identities=18% Similarity=0.214 Sum_probs=228.2
Q ss_pred ceEEEeCCceeeeEeec----------ChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCch
Q 020650 5 GILLGMGNPLLDISSVV----------DDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKF 74 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~----------~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~ 74 (323)
|+|+|+|++++|++..+ ++ .|..++..........+||++.|+|.++++ +| .++.++|.+|+| +
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D-~ 84 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQLLPEH--LHKVSLSFLVDDLVMHRGGVAGNMAFAIGV-LG--GEVALVGAAGAD-F 84 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHHTTSC--GGGCCCCCCCSEEEEEEECHHHHHHHHHHH-TT--CEEEEECEECGG-G
T ss_pred CeEEEECChhheEEEecChHHhhhhchhh--ccccccccccccceecCCChHHHHHHHHHH-cC--CCeEEEEEEeCc-h
Confidence 58999999999999987 55 555555555567788999999999999998 56 999999999999 8
Q ss_pred hHHHHHHHHHcCceeEEee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccccEEEEecccccc
Q 020650 75 GEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTV 152 (323)
Q Consensus 75 g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~ 152 (323)
|+ +++.|++.||+++++. .++.+|+.+++.++ +|++.+..+.++...++++++.. ....+++++++|+++.
T Consensus 85 g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~l~~~~~v~~~~~---- 157 (334)
T 2pkf_A 85 AD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLAD--VVSAIGKPELVIIGAN---- 157 (334)
T ss_dssp HH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHH--HHHHHCSCSEEEEESC----
T ss_pred HH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcCh--hhhhhcCCCEEEEcCC----
Confidence 99 9999999999999985 45678999988886 57777656666655555554432 1123578999999874
Q ss_pred CHHHHHHHHHHHHhCCCeEEEeCCchh--HHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCC
Q 020650 153 SPDSIQLVAEHAAANNKVFMMNLSAPF--ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 230 (323)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~ 230 (323)
.++.+.++++.+++.+.++++|+.... | ..+.++++++++|++++|++|++.+++.... +.++ +
T Consensus 158 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~---~~~~l~~~l~~~dil~~N~~E~~~l~g~~~~---~~~~----l---- 223 (334)
T 2pkf_A 158 DPEAMFLHTEECRKLGLAFAADPSQQLARL---SGEEIRRLVNGAAYLFTNDYEWDLLLSKTGW---SEAD----V---- 223 (334)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECGGGGGTS---CHHHHHTTTTTCSEEEEEHHHHHHHHHHHCC---CHHH----H----
T ss_pred ChHHHHHHHHHHHhcCCeEEEeccchhhhh---hHHHHHHHHhcCCEEecCHHHHHHHhccCCC---CHHH----H----
Confidence 357788889999999999999986421 2 2345778999999999999999999875432 3332 3
Q ss_pred ccccCCccEEEEeeCCCceEEeeCCe-eeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHh
Q 020650 231 KASEIRKRTAVITQGADPVVVAQDGK-LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 231 ~~~~~~~~~vvit~G~~G~~~~~~~~-~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~ 309 (323)
.+. .+.+++|+|++|++++++++ .+++|+++++ .++||+||||+|.|||+++|++|+++++|+++|+++|++++
T Consensus 224 --~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 298 (334)
T 2pkf_A 224 --MAQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPET--SQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVL 298 (334)
T ss_dssp --HTT-CSCEEEECGGGCEEEECTTSCEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred --Hhc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 222 67899999999999987776 7787765431 37899999999999999999999999999999999999999
Q ss_pred hhcCcc--CCCCCC
Q 020650 310 QRSGCT--YPEKPE 321 (323)
Q Consensus 310 ~~~G~~--~p~~~~ 321 (323)
++.|+. .|+.+|
T Consensus 299 ~~~G~~~~~p~~~e 312 (334)
T 2pkf_A 299 ESTGTQEWQWDYEA 312 (334)
T ss_dssp TSSSSSCCCCCHHH
T ss_pred hCCCCCcCCCCHHH
Confidence 999985 465543
No 46
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=6.7e-42 Score=300.93 Aligned_cols=277 Identities=21% Similarity=0.277 Sum_probs=218.6
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCC-cEEEEeeeecCchhHHHH
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMK 79 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~-~v~~~~~vG~D~~g~~i~ 79 (323)
|+ |+|+|+|++++|++..+.. +....+||++.|+|.++++ +| . ++.++|.+|+| +|+.++
T Consensus 1 M~--~~ilviG~~~iD~~~~~~~-------------~~~~~~GG~~~NvA~~la~-LG--~~~~~~ig~vG~D-~g~~~~ 61 (313)
T 3kd6_A 1 MS--LSLLVIGSLAFDDIETPFG-------------RSDNTLGGSSTYIALSASY-FT--DEPIRMVGVVGSD-FGKEHF 61 (313)
T ss_dssp ----CCEEEESCCEEEEEECSSC-------------EEEEEEECHHHHHHHHHTT-TC--SSCEEEEEEEETT-SCHHHH
T ss_pred CC--ccEEEEeEEEEeeecCCCC-------------cccccCCCHHHHHHHHHHH-hC--CCceEEEEecCCC-cHHHHH
Confidence 55 4799999999999965422 3578999999999999997 55 9 99999999999 999999
Q ss_pred HHHHHcCceeEEee-cCCCCceeEEEEE--e-CCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHH
Q 020650 80 KNSKLAGVNVHYYE-DESASTGTCAVCV--V-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPD 155 (323)
Q Consensus 80 ~~l~~~gi~~~~~~-~~~~~t~~~~~~~--~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~ 155 (323)
+.|+++||+++++. .++.+|....-.+ + ++++.+....+....+.+. ..+.++++|++++++ ++++
T Consensus 62 ~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~----~~~~ 131 (313)
T 3kd6_A 62 DLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH------VPQYYRDSKFVCLGN----IDPE 131 (313)
T ss_dssp HHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC------CCGGGTTCSEEEECS----SCHH
T ss_pred HHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc------chHHHccCCEEEEcC----CCHH
Confidence 99999999999986 4556664322111 1 2344444333433334332 224578999999975 3566
Q ss_pred HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccC
Q 020650 156 SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 235 (323)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 235 (323)
....+++.+ +.+.++++|+. ..|.....+.++++++.+|++++|++|++.+++ .++++++++.+ .+.
T Consensus 132 ~~~~~~~~~-~~~~~v~~Dp~-~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l------~~~ 198 (313)
T 3kd6_A 132 LQLKVLDQI-DDPKLVVCDTM-NFWIEGKPEELKKVLARVDVFIVNDSEARLLSG-----DPNLVKTARII------REM 198 (313)
T ss_dssp HHHHHHTTC-SSCSEEEEECC-HHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHS-----CSCHHHHHHHH------HTT
T ss_pred HHHHHHHHH-hhCCEEEEcCh-hhhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhC-----CCCHHHHHHHH------HHc
Confidence 667777776 56788999994 455555566788899999999999999999987 35788999998 667
Q ss_pred CccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC-----CHHHHHHHHhHHHHHHhh
Q 020650 236 RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK-----PIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 236 ~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~-----~~~~a~~~A~~~Aa~~~~ 310 (323)
|++.++||+|++|++++++++.+++|++++ .+++||+||||+|.|||+++|.+|+ ++++|+++|+++|+++|+
T Consensus 199 g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvdttGAGDaf~a~~~~~l~~g~~~~~~~l~~a~~~a~~~aa~~v~ 276 (313)
T 3kd6_A 199 GPKTLIIKKGEHGALLFTDNGIFAAPAFPL--ESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKAVLYGSAMASFCVE 276 (313)
T ss_dssp SCSEEEEECTTSCEEEEETTEEEEECCCTT--CCCSCCTTHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeeCCCcEEEEECCceEEeCCCCC--CCcCCCCCccHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHHHHHHe
Confidence 899999999999999999888888886543 2689999999999999999999998 899999999999999999
Q ss_pred hcCcc---CCCCCC
Q 020650 311 RSGCT---YPEKPE 321 (323)
Q Consensus 311 ~~G~~---~p~~~~ 321 (323)
+.|+. .|+++|
T Consensus 277 ~~G~~~~~~~~~~e 290 (313)
T 3kd6_A 277 QFGPYRYNDLDLLE 290 (313)
T ss_dssp SSTTGGGGTCCHHH
T ss_pred ecCCCCCCCCCHHH
Confidence 99995 366554
No 47
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=1.5e-42 Score=304.39 Aligned_cols=284 Identities=17% Similarity=0.198 Sum_probs=229.7
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
.++|.|++++|++..+++ + .+++..+..+....+||++.|+|.++++ +| .++.++|.+|+ .+|+.+++.|++.
T Consensus 2 i~tvt~n~~~D~~~~~~~--~-~~g~~~~~~~~~~~~GG~~~N~A~~la~-LG--~~~~~~~~vG~-~~g~~i~~~l~~~ 74 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTND--F-KIDGLNRATATYKFAGGKGINVSRVLKT-LD--VESTALGFAGG-FPGKFIIDTLNNS 74 (306)
T ss_dssp EEEEESSCEEEEEEECSS--C-CTTSEEECSEEEEEEESHHHHHHHHHHH-TT--CCCEEEEEECH-HHHHHHHHHHHHT
T ss_pred EEEEecCceEEEEEEcCC--c-ccCceEEeceeEecCCchHHHHHHHHHH-cC--CCeeEEEEecC-cchHHHHHHHHHC
Confidence 688999999999999997 3 5678888888899999999999999998 56 99999999999 6999999999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhh---hccccEEEEecccc-ccCHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWAL---VEKAKYFYIAGFFL-TVSPDSIQLVA 161 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~i~~~~~-~~~~~~~~~~~ 161 (323)
||+++++...+ .|++++.+ .+|++..+...++ .+++++++. ..+. ++++|++|++|+.+ ..+.+.+..++
T Consensus 75 gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g~--~~~~~~~~~--~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 148 (306)
T 2jg5_A 75 AIQSNFIEVDE-DTRINVKL-KTGQETEINAPGP--HITSTQFEQ--LLQQIKNTTSEDIVIVAGSVPSSIPSDAYAQIA 148 (306)
T ss_dssp TCEECCEECSS-CCEEEEEE-ESSSEEEEECCCC--CCCHHHHHH--HHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHH
T ss_pred CCceeEEEcCC-CCeEEEEE-cCCCEEEEECCCC--CCCHHHHHH--HHHHHHhccCCCEEEEeCCCCCCCChHHHHHHH
Confidence 99999987543 47777665 6777755544442 344444321 1111 56799999988653 23457888999
Q ss_pred HHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEE
Q 020650 162 EHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA 240 (323)
Q Consensus 162 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 240 (323)
+.+++++.++++|+.... +.++++ .+|++++|++|++.+++....+.+++.++++.+ .+.+.+.+
T Consensus 149 ~~a~~~g~~v~~D~~~~~--------~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l------~~~g~~~v 214 (306)
T 2jg5_A 149 QITAQTGAKLVVDAEKEL--------AESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLL------VDKGAQSV 214 (306)
T ss_dssp HHHHHHCCEEEEECCHHH--------HHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHH------HHTTCSCE
T ss_pred HHHHHCCCEEEEECChHH--------HHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEE
Confidence 999999999999997432 455666 699999999999999875332223566777777 56688999
Q ss_pred EEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcCccCCCCC
Q 020650 241 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKP 320 (323)
Q Consensus 241 vit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G~~~p~~~ 320 (323)
++|+|++|++++++++.+++++++ ++++||+||||+|.|+|+++|++|+++++|+++|+++|++++++.| +|+.+
T Consensus 215 vvt~G~~G~~~~~~~~~~~~~~~~---v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G--~~~~~ 289 (306)
T 2jg5_A 215 IVSLGGDGAIYIDKEISIKAVNPQ---GKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDED--LATRD 289 (306)
T ss_dssp EEECGGGCEEEECSSEEEEEECCC---CCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSS--SCCHH
T ss_pred EEccCCCceEEEeCCcEEEEeCCc---ccccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCC--CCCHH
Confidence 999999999998888778887654 4789999999999999999999999999999999999999999999 77765
Q ss_pred C
Q 020650 321 E 321 (323)
Q Consensus 321 ~ 321 (323)
|
T Consensus 290 e 290 (306)
T 2jg5_A 290 A 290 (306)
T ss_dssp H
T ss_pred H
Confidence 4
No 48
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.5e-41 Score=303.58 Aligned_cols=295 Identities=16% Similarity=0.167 Sum_probs=230.1
Q ss_pred ceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHH
Q 020650 5 GILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 84 (323)
Q Consensus 5 ~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~ 84 (323)
|+|+++|+.+.++..... ....+..+....+||++.|+|.+|++ +| .++.++|.+|+|.+|+.+++.|++
T Consensus 13 ~~~~~~ge~l~~~~~~~~-------~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~~G~~i~~~L~~ 82 (351)
T 2afb_A 13 MKVVTFGEIMLRLSPPDH-------KRIFQTDSFDVTYGGAEANVAAFLAQ-MG--LDAYFVTKLPNNPLGDAAAGHLRK 82 (351)
T ss_dssp CEEEEESCCEEEEECSTT-------CCGGGCSEEEEEEECHHHHHHHHHHH-TT--SEEEEEEEECSSHHHHHHHHHHHH
T ss_pred ceEEEechhhheecCCCC-------ccccccceeeEecCChHHHHHHHHHH-cC--CCeEEEEEeCCCHHHHHHHHHHHH
Confidence 689999999988654221 12344567788999999999999998 56 999999999999999999999999
Q ss_pred cCceeEEeecCCCCceeEEEEEeCCcc-ceeeccc---ccccCCcccCCCcchhhhhccccEEEEeccccccCH---HHH
Q 020650 85 AGVNVHYYEDESASTGTCAVCVVGGER-SLVANLS---AANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP---DSI 157 (323)
Q Consensus 85 ~gi~~~~~~~~~~~t~~~~~~~~~g~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~---~~~ 157 (323)
.||+++++...+.+|+.+++..++++| +++.+.. +...++++++. ....+++++++|++++.+.+++ +.+
T Consensus 83 ~gv~~~~v~~~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~---~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 159 (351)
T 2afb_A 83 FGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFD---WEKILDGARWFHFSGITPPLGKELPLIL 159 (351)
T ss_dssp TTCBCTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCC---HHHHTTTEEEEEEETTSGGGSTTHHHHH
T ss_pred cCCcceeEEECCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCC---HHHhhcCCCEEEEeCcccccChhHHHHH
Confidence 999999986556688888776655555 3444332 22345555553 2234689999999987654443 778
Q ss_pred HHHHHHHHhCCCeEEEeCCc--hhHH-HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC---------CCCCHHHHHHH
Q 020650 158 QLVAEHAAANNKVFMMNLSA--PFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGW---------ETDDVEEIALK 225 (323)
Q Consensus 158 ~~~~~~~~~~~~~~~~d~~~--~~~~-~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~---------~~~~~~~~~~~ 225 (323)
.++++.+++.+.++++|+.. ..|. ....+.+..+++++|++++|++|++.+++.... +.++++++++.
T Consensus 160 ~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
T 2afb_A 160 EDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEE 239 (351)
T ss_dssp HHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHHHHH
Confidence 88999999999999999863 2332 124456788999999999999999999875321 12235667777
Q ss_pred HhcCCccccC-CccEEEEeeCCCce--------EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHH
Q 020650 226 LSQWPKASEI-RKRTAVITQGADPV--------VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 296 (323)
Q Consensus 226 l~~~~~~~~~-~~~~vvit~G~~G~--------~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~ 296 (323)
+ ... +++.+++|+|++|+ +++++++.++++++++ +++|||||||+|.|+|+++|++|+++++
T Consensus 240 l------~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~l~~ 310 (351)
T 2afb_A 240 V------TRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEI---HIVDRVGAGDSFAGALIYGSLMGFDSQK 310 (351)
T ss_dssp H------HHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEE---ECSCCTTHHHHHHHHHHHHHHHTCCHHH
T ss_pred H------HHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCC---ccCCCCCchHHHHHHHHHHHHcCCCHHH
Confidence 7 443 88999999999975 6777777778877655 7899999999999999999999999999
Q ss_pred HHHHHhHHHHHHhhhcCc-cCCCCCC
Q 020650 297 CVRAGCYTSHVIIQRSGC-TYPEKPE 321 (323)
Q Consensus 297 a~~~A~~~Aa~~~~~~G~-~~p~~~~ 321 (323)
|+++|+++|++++++.|+ .+|++++
T Consensus 311 a~~~A~~~aa~~v~~~G~~~~~~~~e 336 (351)
T 2afb_A 311 KAEFAAAASCLKHTIPGDFVVLSIEE 336 (351)
T ss_dssp HHHHHHHHHHHHTTSSSSSCCCCHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999998 4666544
No 49
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=1.9e-42 Score=303.24 Aligned_cols=268 Identities=21% Similarity=0.256 Sum_probs=218.9
Q ss_pred cceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHH
Q 020650 4 EGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSK 83 (323)
Q Consensus 4 ~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~ 83 (323)
+++|+|+|++++|++..+++ +| ++...........+||++.|+|.+|++ +| .++.++|.+|+| +|+.+++.|+
T Consensus 20 ~~~v~viG~~~iD~~~~~~~--~p-~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D-~G~~i~~~L~ 92 (306)
T 3bf5_A 20 MRFLAYFGHLNIDVLISVDS--IP-REGSVNVKDLRPRFGGTAGNFAIVAQK-FR--IPFDLYSAVGMK-THREYLAMIE 92 (306)
T ss_dssp CEEEEEECCCEEEEEEECSC--CC-SSEEEECSEEEEEEEHHHHHHHHHHHH-TT--CCCEEEEEEETT-TCHHHHHHHH
T ss_pred CCcEEEECCceEEEEEecCC--CC-CCceEECcceEecCCChHHHHHHHHHH-cC--CCeEEEEEEeCC-hHHHHHHHHH
Confidence 46899999999999999888 66 566666777888999999999999998 56 999999999999 9999999999
Q ss_pred HcCceeEEee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHH
Q 020650 84 LAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 162 (323)
Q Consensus 84 ~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~ 162 (323)
+.||+++++. .++.+|+.++++++.|+|+++.+.++...++ +++. ++++++|+++.. .+.++++
T Consensus 93 ~~gV~~~~v~~~~~~~T~~~~~~~~~g~r~~~~~~ga~~~~~-~~l~--------~~~~~v~~~~~~------~~~~~~~ 157 (306)
T 3bf5_A 93 SMGINTGHVEKFEDESGPICYIATDGKKQVSFMHQGAMAAWA-PQLA--------DEYEYVHFSTGP------NYLDMAK 157 (306)
T ss_dssp HTTCCCTTEEEETTCCCSEEEEEECSSCEEEEEECTHHHHCC-CCCC--------SCEEEEEECSSS------SHHHHHH
T ss_pred HcCCCchheEecCCCCCceEEEEEcCCeeEEEEeCChhhhhh-Hhhc--------CCCCEEEECChH------HHHHHHH
Confidence 9999999984 5677899999888668888777777665565 3331 689999998743 5566777
Q ss_pred HHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEE
Q 020650 163 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI 242 (323)
Q Consensus 163 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvi 242 (323)
.+++ ++++|+....|. ...+.++.+++++|++++|++|++.+++....+.. .+ . +++
T Consensus 158 ~a~~---~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~-------~l------~------vvv 214 (306)
T 3bf5_A 158 SIRS---KIIFDPSQEIHK-YSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP-------KV------T------TIV 214 (306)
T ss_dssp HCCS---EEEECCGGGGGG-SCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC-------SS------C------EEE
T ss_pred HhCC---cEEEcCchhhhh-ccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc-------cE------E------EEE
Confidence 6654 888999754331 12345677889999999999999999875432110 12 1 999
Q ss_pred eeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhh--cCcc--CCC
Q 020650 243 TQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR--SGCT--YPE 318 (323)
Q Consensus 243 t~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~--~G~~--~p~ 318 (323)
|+|++|++++++++.+++|+++ ++ +|||||||+|.|||+++|++|+++++|+++|+++|++++++ .|+. +|+
T Consensus 215 T~G~~Ga~~~~~~~~~~~~~~~---v~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~~~G~~~~~p~ 290 (306)
T 3bf5_A 215 TNGERGSSLFMDGKKYDFPAIP---SS-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTIIAHHVIDDGIENFSLNMED 290 (306)
T ss_dssp EEGGGEEEEEETTEEEEEECCC---CC-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHCSTTCCCCHHH
T ss_pred eecccCeEEEeCCcEEEecCCc---CC-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCccccccCCC
Confidence 9999999999888888887654 37 99999999999999999999999999999999999999999 9983 455
Q ss_pred CC
Q 020650 319 KP 320 (323)
Q Consensus 319 ~~ 320 (323)
++
T Consensus 291 ~~ 292 (306)
T 3bf5_A 291 LE 292 (306)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.3e-38 Score=277.98 Aligned_cols=271 Identities=16% Similarity=0.123 Sum_probs=211.2
Q ss_pred eEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHc
Q 020650 6 ILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLA 85 (323)
Q Consensus 6 ~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~ 85 (323)
-|.+.|.+..|.+..... ....+||++.|+|.+|++ +| .++.++|.+|+|. +.+++.|++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~--------------~~~~~GG~~~NvA~~la~-LG--~~~~~i~~vG~D~--~~~~~~L~~~ 73 (298)
T 1vk4_A 13 MITFIGHVSKDVNVVDGK--------------REIAYGGGVVMGAITSSL-LG--VKTKVITKCTRED--VSKFSFLRDN 73 (298)
T ss_dssp EEEEECCCEEEEEEETTE--------------EEEEEECHHHHHHHHHHH-TT--CEEEEEEEECTTT--GGGGTTTGGG
T ss_pred eEEEeccccCceEeecCe--------------EEEecCCHHHHHHHHHHH-cC--CceEEEEEEcCCH--HHHHHHHHHc
Confidence 478889999999887765 678999999999999998 56 9999999999997 7788999999
Q ss_pred CceeEEeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccccEEEEeccccccCHHHHHHHHHHHH
Q 020650 86 GVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 165 (323)
Q Consensus 86 gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~ 165 (323)
||+++++.. +.+|+.+.++..+|+++++.+.++...++++++.. ..+++++++++.+ .+...++++.++
T Consensus 74 gVd~~~v~~-~~~t~~~~i~~~~g~~~~~~~~~~~~~l~~~~~~~-------~~~~~v~~~~~~~---~~~~~~~~~~~~ 142 (298)
T 1vk4_A 74 GVEVVFLKS-PRTTSIENRYGSDPDTRESFLISAADPFTESDLAF-------IEGEAVHINPLWY---GEFPEDLIPVLR 142 (298)
T ss_dssp TCEEEEEEC-SSCEEEEEEC-----CCEEEEEECCCCCCGGGGGG-------CCSSEEEECCSST---TSSCGGGHHHHH
T ss_pred CCceEEEec-CCCcEEEEEEcCCCCeeEEEeccccccCCHHHcCc-------CCCCEEEECCccc---ccccHHHHHHHH
Confidence 999999865 34566655543367887776666665666555431 5789999987632 223345667777
Q ss_pred hCCCeEEEeCCchh---HH----HHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCcc
Q 020650 166 ANNKVFMMNLSAPF---IC----EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 238 (323)
Q Consensus 166 ~~~~~~~~d~~~~~---~~----~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 238 (323)
+.+.++++|+.+.. |. ....+.++++++.+|++++|++|++.+++. ++++++++.+ .+.|++
T Consensus 143 ~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l------~~~g~~ 211 (298)
T 1vk4_A 143 RKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGT-----NDLRESCRII------RSFGAK 211 (298)
T ss_dssp HHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSC-----SCHHHHHHHH------HHTTCS
T ss_pred HcCCEEEEecCccccccccccccccchHHHHhhcccCCEEecCHHHHHHHhCC-----CCHHHHHHHH------HhcCCC
Confidence 88999999986311 00 001123567899999999999999999873 4788888888 667889
Q ss_pred EEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhc-CCCHHHHHHHHhHHHHHHhhhcCcc-C
Q 020650 239 TAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ-EKPIEECVRAGCYTSHVIIQRSGCT-Y 316 (323)
Q Consensus 239 ~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~-g~~~~~a~~~A~~~Aa~~~~~~G~~-~ 316 (323)
.+++|+ ++|++++++ +.+++|++ +++++|||||||+|.|||+++|++ |+++++|+++|+++|++++++.|+. .
T Consensus 212 ~vvvT~-~~G~~~~~~-~~~~~~~~---~v~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~A~a~aa~~v~~~G~~~~ 286 (298)
T 1vk4_A 212 IILATH-ASGVIVFDG-NFYEASFR---SWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPGPLRR 286 (298)
T ss_dssp SEEEEE-TTEEEEESS-SEEEEECC---CSSGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTTSSSSCCG
T ss_pred EEEEEc-CCCcEEEeC-CEEEeccC---CcccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccCCCCCC
Confidence 999999 999999877 66777754 447999999999999999999999 9999999999999999999999995 3
Q ss_pred CCCCCC
Q 020650 317 PEKPEF 322 (323)
Q Consensus 317 p~~~~~ 322 (323)
|+.+|+
T Consensus 287 ~~~~el 292 (298)
T 1vk4_A 287 EDLEAI 292 (298)
T ss_dssp GGGGGC
T ss_pred CCHHHH
Confidence 565554
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.92 E-value=3.4e-25 Score=194.34 Aligned_cols=220 Identities=17% Similarity=0.199 Sum_probs=151.5
Q ss_pred cEEEEeeeecCchhHHHHHHHHHcCceeEEeecC--CCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhh---
Q 020650 62 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDE--SASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWAL--- 136 (323)
Q Consensus 62 ~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~--~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 136 (323)
.+.++|.+|+|. |+.+ |+++||+++++... ..+|+..+ ..+ ..++++++.. ..+.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~------------~~g--~~l~~~~i~~--~~~~~~~ 71 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH------------WKG--QVLNSDELQE--LYEGLRL 71 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC------------CCE--EECCHHHHHH--HHHHHHH
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC------------ccC--ccCCHHHHHH--HHHHHHh
Confidence 477889999998 9888 99999999997531 11232211 111 2344444432 1111
Q ss_pred --hccccEEEEeccccc-cCHHHHHHHHHHHHhCCC--eEEEeCCch--------hH-HHHHHHHHHh-hcCCCcEEEeC
Q 020650 137 --VEKAKYFYIAGFFLT-VSPDSIQLVAEHAAANNK--VFMMNLSAP--------FI-CEFFKDALEK-VLPYMDYIFGN 201 (323)
Q Consensus 137 --~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~d~~~~--------~~-~~~~~~~~~~-~l~~~dvl~~n 201 (323)
+.++++++++ +... ...+.+.++++.+++++. ++++||... .| .+...+.++. +++++|++++|
T Consensus 72 ~~~~~~~~v~~G-~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN 150 (312)
T 2yxt_A 72 NNMNKYDYVLTG-YTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPN 150 (312)
T ss_dssp TTCCCCSEEEEC-CCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCC
T ss_pred cCCccCCEEEEC-CCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCC
Confidence 5678998764 3221 012455578888888775 478896421 12 1123444654 89999999999
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc------eEEe-------eC-C----eeeEEece
Q 020650 202 ETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP------VVVA-------QD-G----KLKKFPVI 263 (323)
Q Consensus 202 ~~e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G------~~~~-------~~-~----~~~~~~~~ 263 (323)
++|++.+++....+.++++++++.+ .+.|++.++||.|+.| ++++ ++ + +.++++++
T Consensus 151 ~~Ea~~L~g~~~~~~~~~~~~~~~l------~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (312)
T 2yxt_A 151 QFEAELLSGRKIHSQEEALRVMDML------HSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIR 224 (312)
T ss_dssp HHHHHHHHSCCCCSHHHHHHHHHHH------HHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEE
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeec
Confidence 9999999875433334677788888 5678999999988764 6665 44 2 56677765
Q ss_pred eCCCCcccCCCCcchHHHHHHHHHhhc-CCCHHHHHHHHhHHHHHHhhhc
Q 020650 264 VLPKDKLVDTNGAGDAFVGGFLSQLVQ-EKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 264 ~~~~~~~~d~tGAGDaf~ag~~~~l~~-g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
++ ++ ||+||||+|.|+|+++|++ |+++++|+++|+++|+.++++.
T Consensus 225 ~v---~v-dttGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~~ 270 (312)
T 2yxt_A 225 KV---DA-VFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQRT 270 (312)
T ss_dssp CC---SS-CCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred cc---CC-CCCCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 44 55 9999999999999999999 9999999999999998888543
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.91 E-value=4.1e-24 Score=184.88 Aligned_cols=226 Identities=14% Similarity=0.117 Sum_probs=156.3
Q ss_pred CcEEE-EeeeecCchhHHHHHHHHHcCceeEEeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCc-c-hhh-
Q 020650 61 GATSY-IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKP-E-NWA- 135 (323)
Q Consensus 61 ~~v~~-~~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~-~~~- 135 (323)
..... +|.+|.| .....|++.||++.++.. . +..+ .+.+.+ .+ ..++++++... + ..+
T Consensus 21 i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~~---~g--~~~~~~~~~~~~~~l~~~ 83 (283)
T 2ddm_A 21 VQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT-------V-LLSNTPHYDTF---YG--GAIPDEWFSGYLRALQER 83 (283)
T ss_dssp EEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE-------E-EESSCTTSSCC---CE--EECCHHHHHHHHHHHHHT
T ss_pred EecccCCCcchHH----HHHHHHHHcCCeeeEEeE-------E-EeccCCCcCce---ee--eeCCHHHHHHHHHHHHhc
Confidence 55444 7888877 346789999999998742 1 1222 333331 11 23344443220 0 111
Q ss_pred -hhccccEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCch-----hHH-HHHHHHH-HhhcCCCcEEEeCHHHH
Q 020650 136 -LVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAP-----FIC-EFFKDAL-EKVLPYMDYIFGNETEA 205 (323)
Q Consensus 136 -~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~-----~~~-~~~~~~~-~~~l~~~dvl~~n~~e~ 205 (323)
.++++++++++........+.+.++++.+++ .+.++++|+... .|. +...+.+ +.+++++|++++|.+|+
T Consensus 84 ~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~ 163 (283)
T 2ddm_A 84 DALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFEL 163 (283)
T ss_dssp TCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHH
T ss_pred CCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHH
Confidence 2457899998654332234667788888887 688999997421 121 1112223 46889999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCC-------ceEEeeCCeeeEEeceeCCCCcccCCCCcch
Q 020650 206 RTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD-------PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGD 278 (323)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~-------G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGD 278 (323)
+.|++....+.+++.++++.+ .+.+.+.+++|.|++ |++++++++.++++++++ . +|++||||
T Consensus 164 ~~L~g~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v---~-vdt~GAGD 233 (283)
T 2ddm_A 164 EILTGKNCRDLDSAIAAAKSL------LSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRV---K-TDLKGTGD 233 (283)
T ss_dssp HHHHTSCCSSHHHHHHHHHHH------CCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECC---C-CCCCCHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeecee---C-CCCCChHH
Confidence 999885433334577788888 667899999999999 888888887777776543 3 79999999
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhcC
Q 020650 279 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 313 (323)
Q Consensus 279 af~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~G 313 (323)
+|.|+|+++|++|+++++|+++|+++++.++++..
T Consensus 234 af~a~~~~~l~~g~~~~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 234 LFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998763
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.89 E-value=7.5e-23 Score=177.25 Aligned_cols=161 Identities=12% Similarity=0.101 Sum_probs=122.2
Q ss_pred ccEEEEeccccccCHHHHHHHHHHHHhCCCe-EEEeCCch------hHHHHHHHHHHh-hcCCCcEEEeCHHHHHHHHhh
Q 020650 140 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKV-FMMNLSAP------FICEFFKDALEK-VLPYMDYIFGNETEARTFSKV 211 (323)
Q Consensus 140 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~------~~~~~~~~~~~~-~l~~~dvl~~n~~e~~~l~~~ 211 (323)
.|+++++. ..+.+.+..+++.+++.+.+ +++|+... .|.+...+.+.. +++.+|++++|..|++.|++.
T Consensus 95 ~~~v~~G~---l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~ 171 (288)
T 1jxh_A 95 IDTTKIGM---LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDA 171 (288)
T ss_dssp CSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTC
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCC
Confidence 68887753 12568889999999999986 99997542 222222233543 789999999999999999875
Q ss_pred -cCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc-----eEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHH
Q 020650 212 -QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285 (323)
Q Consensus 212 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G-----~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~ 285 (323)
...+.++++++++.+ .+.+.+.+++|.|++| ++++++++.+++++++ ++++||+||||+|.|+|+
T Consensus 172 ~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~---~~~vdttGAGD~f~a~~~ 242 (288)
T 1jxh_A 172 PHARTEQEMLAQGRAL------LAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPR---VNTKNTHGTGCTLSAALA 242 (288)
T ss_dssp CCCCSHHHHHHHHHHH------HHTTCSEEEEBC---------CEEECSSCEEEC---C---CCCSCCBTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccc---cCCCCCCCchHHHHHHHH
Confidence 333334567778888 5678899999999999 8888777777766543 478999999999999999
Q ss_pred HHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 286 SQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 286 ~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
++|++|+++++|+++|+++++.++++.
T Consensus 243 a~l~~g~~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 243 ALRPRHRSWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999766
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.86 E-value=8.6e-21 Score=161.80 Aligned_cols=162 Identities=17% Similarity=0.195 Sum_probs=125.2
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCch------hHHHHHHHHH-HhhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSAP------FICEFFKDAL-EKVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~------~~~~~~~~~~-~~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..+.++++. + .+.+.+..+++.+++.+ .++++|+... .|.+...+.+ +.+++++|++++|..|++.|++
T Consensus 70 ~~~~v~~G~--l-~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 146 (258)
T 1ub0_A 70 PLHAAKTGA--L-GDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECC--C-CSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CCCEEEECC--c-CCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhC
Confidence 357777653 1 25677888889999888 7899998431 2222222334 4688999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCC-c----eEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHH
Q 020650 211 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD-P----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 285 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~-G----~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~ 285 (323)
....+.++++++++.+ .+.+++.+++|.|++ | ++++++++.+++++++ .+++||+||||+|.|+|+
T Consensus 147 ~~~~~~~~~~~~a~~l------~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~---~~~~dt~GaGD~f~a~~~ 217 (258)
T 1ub0_A 147 RPIRTLKEAEEAAKAL------LALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPR---VHTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHH------HTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECC---CCCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccc---cCCCCCCChHHHHHHHHH
Confidence 5433334567778888 557888999999998 8 7788877777777543 478999999999999999
Q ss_pred HHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 286 SQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 286 ~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
++|.+|+++++|+++|+++++.++++.
T Consensus 218 ~~l~~g~~~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 218 ALLAKGRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998764
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.82 E-value=1.4e-19 Score=155.33 Aligned_cols=162 Identities=20% Similarity=0.175 Sum_probs=126.6
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCCC-eEEEeCCch------hHHHHHHHHHH-hhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNK-VFMMNLSAP------FICEFFKDALE-KVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~------~~~~~~~~~~~-~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..|.++++.. .+.+.+..+++.+++.+. ++++|+... .+.+...+.+. ++++.+|++++|..|++.|++
T Consensus 74 ~~d~v~~G~l---~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g 150 (271)
T 2i5b_A 74 GVDAMKTGML---PTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG 150 (271)
T ss_dssp CCSEEEECCC---CSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHT
T ss_pred CCCEEEECCC---CCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhC
Confidence 5688888542 236788888999998888 599997421 11222334454 788999999999999999988
Q ss_pred hc-CCCCCCHHHHHHHHhcCCccccCCccEEEEeeCC--Cce----EEeeCCeeeEEeceeCCCCcccCCCCcchHHHHH
Q 020650 211 VQ-GWETDDVEEIALKLSQWPKASEIRKRTAVITQGA--DPV----VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 283 (323)
Q Consensus 211 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~--~G~----~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag 283 (323)
.. ..+.++.+++++.+ .+.+.+.+++|.|. +|+ +++++++.+++++++ .+++|++||||+|.|+
T Consensus 151 ~~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~dt~GaGD~f~a~ 221 (271)
T 2i5b_A 151 MDELKTVDDMIEAAKKI------HALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEM---IDTPYTHGAGCTFSAA 221 (271)
T ss_dssp CCCCCSHHHHHHHHHHH------HTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECC---CCCSCCBTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH------HHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccc---cCCCCCCChHHHHHHH
Confidence 54 33333567778888 56788999999999 784 667666777777543 3789999999999999
Q ss_pred HHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 284 FLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 284 ~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
|+++|++|+++++|+++|+++++.++++.
T Consensus 222 ~~~~l~~g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 222 VTAELAKGAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999875
No 56
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.81 E-value=1.7e-19 Score=156.10 Aligned_cols=167 Identities=11% Similarity=0.122 Sum_probs=125.0
Q ss_pred ccccEEEEeccccc-cCHHHHHHHHHHHHhCC--CeEEEeCC------chhHHHHHHHHHH-hhcCCCcEEEeCHHHHHH
Q 020650 138 EKAKYFYIAGFFLT-VSPDSIQLVAEHAAANN--KVFMMNLS------APFICEFFKDALE-KVLPYMDYIFGNETEART 207 (323)
Q Consensus 138 ~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~d~~------~~~~~~~~~~~~~-~~l~~~dvl~~n~~e~~~ 207 (323)
.+.|++. .|+... ...+.+.++++.+++.+ .++++||- ...|.+...+.++ .+++.+|++++|..|++.
T Consensus 76 ~~~d~v~-~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 154 (289)
T 3pzs_A 76 KDCDAVL-SGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQ 154 (289)
T ss_dssp GGCCEEE-ECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHH
T ss_pred cCCCEEE-ECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHH
Confidence 5788865 454321 22356777777777665 77899961 2234444555565 478999999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeC-CCce-------EEeeCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 208 FSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQG-ADPV-------VVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 208 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G-~~G~-------~~~~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
|++....+.+++.++++.+ .+.|.+.+++|.| .+|+ +++++++.++++.+.++ ..++|++||||+
T Consensus 155 L~g~~~~~~~~~~~aa~~l------~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~dt~GaGD~ 227 (289)
T 3pzs_A 155 LSGERVENVEQAVQVARSL------CARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVD-FGKRQPVGVGDL 227 (289)
T ss_dssp HHTSCCCSHHHHHHHHHHH------HTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCC-CTTSCCTTHHHH
T ss_pred HhCCCCCCHHHHHHHHHHH------HHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeec-CCCCCCCcHHHH
Confidence 9986544445677888888 6678999999975 4776 67777777777654442 123899999999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
|.|+|+++|.+|+++++|+++|+++++.++++.
T Consensus 228 f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~t 260 (289)
T 3pzs_A 228 TSGLLLVNLLKGEPLDKALEHVTAAVYEVMLKT 260 (289)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988877653
No 57
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.81 E-value=8.1e-19 Score=150.94 Aligned_cols=161 Identities=17% Similarity=0.124 Sum_probs=128.0
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhC-CCeEEEeCCc----hhH---HHHHHHHHHhhcCCCcEEEeCHHHHHHHHh
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAAN-NKVFMMNLSA----PFI---CEFFKDALEKVLPYMDYIFGNETEARTFSK 210 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~----~~~---~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~ 210 (323)
..|.+.++- . .+++.+..+.+.+++. +.++++||.. ..| .++..+.++++++.+|++++|..|++.|++
T Consensus 74 ~~daik~G~-l--~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g 150 (282)
T 3h74_A 74 HFDQALIGY-V--GSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTG 150 (282)
T ss_dssp CCSEEEECC-C--CSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHT
T ss_pred ccCEEEECC-C--CCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhC
Confidence 578888742 1 2567777777777775 5788999832 112 344556677899999999999999999998
Q ss_pred hcCCCCCCHHHHHHHHhcCCcccc-CCc-cEEEEeeCC----CceEEee-CCeeeEEeceeCCCCcccCCCCcchHHHHH
Q 020650 211 VQGWETDDVEEIALKLSQWPKASE-IRK-RTAVITQGA----DPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 283 (323)
Q Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~-~~vvit~G~----~G~~~~~-~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag 283 (323)
....+.++++++++.+ .+ .|+ +.+++|.|. .|+++++ +++.++++.+++ .+|++|+||+|.|+
T Consensus 151 ~~~~~~~~~~~aa~~L------~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v----~~dt~GaGD~fsaa 220 (282)
T 3h74_A 151 APYQVTPDLEVILPAL------QAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRL----PGHYNGTGDTLAAV 220 (282)
T ss_dssp CCCCSSCCHHHHHHHH------HTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECC----SSCCTTHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCC----CCCCcCHHHHHHHH
Confidence 7655557899999998 56 788 999999984 7888875 666777775433 38999999999999
Q ss_pred HHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 284 FLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 284 ~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
|+++|.+|+++++|+++|+++++.++++.
T Consensus 221 i~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 249 (282)
T 3h74_A 221 IAGLLGRGYPLAPTLARANQWLNMAVAET 249 (282)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998764
No 58
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.76 E-value=4.1e-18 Score=147.26 Aligned_cols=161 Identities=14% Similarity=0.103 Sum_probs=119.4
Q ss_pred cccEEEEeccccccCHH---HHHHHHHHHHhCCCeEEEeCCch----hH---HHHHHHHHHhhcCCCcEEEeCHHHHHHH
Q 020650 139 KAKYFYIAGFFLTVSPD---SIQLVAEHAAANNKVFMMNLSAP----FI---CEFFKDALEKVLPYMDYIFGNETEARTF 208 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~----~~---~~~~~~~~~~~l~~~dvl~~n~~e~~~l 208 (323)
..|.+.++ +. -+++ .+.++++.+++.+.++++||... .| .++..+.++++++.+|++++|..|++.|
T Consensus 77 ~~~aik~G-~l--~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L 153 (291)
T 3mbh_A 77 QFDAIYTG-YL--GSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYL 153 (291)
T ss_dssp CCSEEEEC-CC--SSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHH
T ss_pred ccCEEEEC-CC--CCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHH
Confidence 56788874 22 1344 44455555544568899999432 12 2445556778999999999999999999
Q ss_pred HhhcCC---CCCCHHHHHHHHhcCCccccCCccEEEEeeCC-------CceEEeeC--CeeeEEeceeCCCCcccCCCCc
Q 020650 209 SKVQGW---ETDDVEEIALKLSQWPKASEIRKRTAVITQGA-------DPVVVAQD--GKLKKFPVIVLPKDKLVDTNGA 276 (323)
Q Consensus 209 ~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~-------~G~~~~~~--~~~~~~~~~~~~~~~~~d~tGA 276 (323)
++.... +.++++++++.+ .+.|++.+++|.|. .|++++++ ++.++++.++ +. +|++|+
T Consensus 154 ~g~~~~~~~~~~~~~~aa~~L------~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~---~~-~dt~Ga 223 (291)
T 3mbh_A 154 LDEPYKADSTDEELKEYLRLL------SDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPY---LP-AHYPGT 223 (291)
T ss_dssp HTCCCCSCCCHHHHHHHHHHH------HHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESC---CG-GGSTTH
T ss_pred hCCCCCCCCCHHHHHHHHHHH------HhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecc---cC-CCCCCh
Confidence 985432 234577888888 66789999999653 57777776 3455666532 23 899999
Q ss_pred chHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 277 GDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 277 GDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
||+|.|+|+++|.+|+++++|+++|+++++.++++.
T Consensus 224 GD~f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 224 GDTFTSVITGSLMQGDSLPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988888654
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.76 E-value=6.3e-18 Score=146.58 Aligned_cols=161 Identities=14% Similarity=0.114 Sum_probs=114.7
Q ss_pred ccccEEEEeccccccCH---HHHHHHHHHHHhCC------CeEEEeCCc----hhH-HHHHHHHHHhhcCCCcEEEeCHH
Q 020650 138 EKAKYFYIAGFFLTVSP---DSIQLVAEHAAANN------KVFMMNLSA----PFI-CEFFKDALEKVLPYMDYIFGNET 203 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~------~~~~~d~~~----~~~-~~~~~~~~~~~l~~~dvl~~n~~ 203 (323)
..+|+|.+ |+.. +. +.+.++++..++.+ .++++||-. ..| .+...+.++++++.+|++.+|..
T Consensus 75 ~~~daV~t-G~l~--s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILT-GYIN--NVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYF 151 (300)
T ss_dssp GGCSEEEE-CCCC--CHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHH
T ss_pred ccCCEEEE-CCCC--CHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHH
Confidence 46788666 5432 33 44555666665544 678899821 122 22345556779999999999999
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCc-------eEEeeC------CeeeEEeceeCCCCcc
Q 020650 204 EARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-------VVVAQD------GKLKKFPVIVLPKDKL 270 (323)
Q Consensus 204 e~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G-------~~~~~~------~~~~~~~~~~~~~~~~ 270 (323)
|++.|++....+.++++++++.| .+.|++.++||.|..| +++... ++.++++.+.+ ..
T Consensus 152 Ea~~L~g~~~~~~~~~~~aa~~L------~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v---~~ 222 (300)
T 3zs7_A 152 EASLLSGVTVNDLSSAILAADWF------HNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYH---EG 222 (300)
T ss_dssp HHHHHHSSCCCSHHHHHHHHHHH------HHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECC---SS
T ss_pred HHHHHhCCCCCCHHHHHHHHHHH------HHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccC---CC
Confidence 99999986544445677888888 6678999999999988 233334 45666665444 33
Q ss_pred cCCCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhhhc
Q 020650 271 VDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 312 (323)
Q Consensus 271 ~d~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~~~ 312 (323)
|++|+||+|.|+|+++| +|+++++|+++|+++...++++-
T Consensus 223 -~~~GtGD~fsaal~a~l-~g~~~~~Av~~A~~~v~~~i~~t 262 (300)
T 3zs7_A 223 -RYTGTGDVFAACLLAFS-HSHPMDVAIGKSMAVLQELIIAT 262 (300)
T ss_dssp -CBTTHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHT
T ss_pred -CCcCHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999 99999999999999977766543
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.66 E-value=1e-15 Score=130.89 Aligned_cols=160 Identities=14% Similarity=0.068 Sum_probs=107.4
Q ss_pred hhhhhccccEEEEeccccc-cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFLT-VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFS 209 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~~l~ 209 (323)
..+.+..++.+++..-.+. ...+.+..+++.+++.+.++++|+..........+..+++++ ..|++.+|..|+..|+
T Consensus 52 ~~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~ 131 (272)
T 1ekq_A 52 VADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTV 131 (272)
T ss_dssp HHHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHC
T ss_pred HHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHh
Confidence 3455677898888432211 112556777788888999999999643111111223345565 8999999999999998
Q ss_pred hhc-C--------CCCCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHH
Q 020650 210 KVQ-G--------WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 280 (323)
Q Consensus 210 ~~~-~--------~~~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf 280 (323)
+.. . .+.++..++++.+ .......+++| |..+ ++.++++.++++.. ...+.|++|+||+|
T Consensus 132 g~~~~~~~gvd~~~~~~~~~~aa~~l------~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~---~~~~~~ttGaGD~l 200 (272)
T 1ekq_A 132 GVTDWLIKGVDAGEGGGDIIRLAQQA------AQKLNTVIAIT-GEVD-VIADTSHVYTLHNG---HKLLTKVTGAGCLL 200 (272)
T ss_dssp C---------------HHHHHHHHHH------HHHHTSEEEEC-SSSE-EEECSSCEEEECCC---CGGGGGSTTHHHHH
T ss_pred CCCcccccCccCCCCHHHHHHHHHHH------HHHcCCEEEEE-CCCC-EEEeCCEEEEEcCC---CccccCccCchHHH
Confidence 753 2 1223456677777 33334455555 8887 55566666666643 23667999999999
Q ss_pred HHHHHHHhhcCCCHHHHHHHHhH
Q 020650 281 VGGFLSQLVQEKPIEECVRAGCY 303 (323)
Q Consensus 281 ~ag~~~~l~~g~~~~~a~~~A~~ 303 (323)
.|.+.+.+.+|.++.+|+.+|+.
T Consensus 201 ag~iaa~la~g~~~~~A~~~A~~ 223 (272)
T 1ekq_A 201 TSVVGAFCAVEENPLFAAIAAIS 223 (272)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHH
Confidence 88888888889999999999986
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.56 E-value=2.3e-14 Score=134.16 Aligned_cols=159 Identities=18% Similarity=0.230 Sum_probs=112.9
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHH---hCCCeEEEeCCc------hhHHHHHHHHHH-hhcCCCcEEEeCHHHHHHH
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAA---ANNKVFMMNLSA------PFICEFFKDALE-KVLPYMDYIFGNETEARTF 208 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~------~~~~~~~~~~~~-~~l~~~dvl~~n~~e~~~l 208 (323)
..|.|.++.. +.+.+..+.+.++ +.+.++++||.. ..+.+...+.+. .+++.+|++.+|..|++.|
T Consensus 91 ~~daIkiG~l----s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L 166 (550)
T 3rm5_A 91 KCNVIKTGML----TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKL 166 (550)
T ss_dssp CCSEEEECSC----CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC----CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHH
Confidence 6788888632 5655554444444 447889999942 122222334444 7899999999999999999
Q ss_pred Hhhc--CCCCCCHHHHHHHHhcCCccccCCc-cEEEEeeCCCc--------e--EEe--eCCeeeEEeceeCCCCcccCC
Q 020650 209 SKVQ--GWETDDVEEIALKLSQWPKASEIRK-RTAVITQGADP--------V--VVA--QDGKLKKFPVIVLPKDKLVDT 273 (323)
Q Consensus 209 ~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~-~~vvit~G~~G--------~--~~~--~~~~~~~~~~~~~~~~~~~d~ 273 (323)
++.. ..+.+++.++++.+ .+.+. +.|+||.|..+ + +++ ++++.++++.+.+ ..+|+
T Consensus 167 ~g~~~~i~~~~d~~~aa~~L------~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v---~~~~t 237 (550)
T 3rm5_A 167 LGEERKVNGLQDIFQIAKDL------AKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFV---NTTHT 237 (550)
T ss_dssp HSCCCCCCSSHHHHHHHHHH------HHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECC---CCSCC
T ss_pred hCCCCCCCCHHHHHHHHHHH------HHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCc---CCCCC
Confidence 9853 22334677888888 55555 78999998763 3 455 4556666765433 57899
Q ss_pred CCcchHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHhh
Q 020650 274 NGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 274 tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
+|+||+|.|+++++|.+|.++++|+++|+..-...++
T Consensus 238 ~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 238 HGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp BTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999975555543
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.30 E-value=4.9e-11 Score=101.16 Aligned_cols=162 Identities=15% Similarity=0.081 Sum_probs=107.8
Q ss_pred hhhhhccccEEEEeccccccCHH---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEEeCHHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFLTVSPD---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTF 208 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~e~~~l 208 (323)
..+.++.+|.+++..-.+ +++ .+..+++.+++.+.++++|+..........+....+++ ..+++.+|..|+..|
T Consensus 50 ~~~~~~~~dalvi~~G~~--~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L 127 (265)
T 1v8a_A 50 LEEMIRLADAVVINIGTL--DSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHHCSEEEEECTTC--CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHHCCEEEEEECCC--CHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHH
Confidence 456678899999964221 333 45566777888899999999752211111222233332 289999999999999
Q ss_pred HhhcC----CC----C-CCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 209 SKVQG----WE----T-DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 209 ~~~~~----~~----~-~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
++... .+ . ++..++++.+ .......+++| |..+. ++++++.+.++... ....+++|+||+
T Consensus 128 ~g~~~~~~gvd~~~~~~~~~~~aa~~l------a~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~---~~~~~~~GtGD~ 196 (265)
T 1v8a_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNA------AREFNTTVAVT-GAVDY-VSDGRRTFAVYNGH---ELLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHH------HHHTTSEEEEE-SSSEE-EECSSCEEEECCCC---GGGGGSTTHHHH
T ss_pred hCCcccccCcCcccccHHHHHHHHHHH------HHHhCcEEEEc-CCCcE-EEcCCEEEEEcCCC---cCcCCccChhHH
Confidence 88652 11 1 3456677777 33344557777 77764 45666666665422 245699999999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHHHHHH
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYTSHVI 308 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~Aa~~ 308 (323)
|.|.+.+.|.+|.+ .+|+..|..+-+.+
T Consensus 197 Lsg~iaa~lA~g~~-~~Aa~~a~~~~~~A 224 (265)
T 1v8a_A 197 VAALTGAFVAVTEP-LKATTSALVTFGIA 224 (265)
T ss_dssp HHHHHHHHHTTSCH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-HHHHHHHHHHHHHH
Confidence 99999999999999 88888776554433
No 63
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=98.97 E-value=2.7e-09 Score=92.35 Aligned_cols=156 Identities=13% Similarity=0.087 Sum_probs=93.7
Q ss_pred hhhccccEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCchhHHHHHHHHHHhh-c-CCCcEEEeCHHHHHHHHh
Q 020650 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAPFICEFFKDALEKV-L-PYMDYIFGNETEARTFSK 210 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~-l-~~~dvl~~n~~e~~~l~~ 210 (323)
+.++..|.+.++. .+..+++....+.+..+. .+.++++|+......... ..+ + +..+++.+|..|++.|++
T Consensus 121 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~----~~l~L~~~~~viTPN~~E~~~L~g 195 (311)
T 3bgk_A 121 EQITAADVVLMGP-GLAEDDLAQTTFDVVWQAIEPKQTLIIDGSAINLLAKR----KPAIWPTKQIILTPHQKEWERLSG 195 (311)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTSEEEEETHHHHHHHHC----C-CCCSCSCEEEECCSCC-CTTTC
T ss_pred HHhccCCEEEEcC-CCCCCHHHHHHHHHHHHHcCCCCeEEEeCChhhhhccC----hhhcCCCCCEEECCcHHHHHHHhC
Confidence 4456788998863 122234333333333333 378999999544321110 012 3 467899999999999987
Q ss_pred hcCCCC-CCH-HHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHH-
Q 020650 211 VQGWET-DDV-EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ- 287 (323)
Q Consensus 211 ~~~~~~-~~~-~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~- 287 (323)
....+. ++. .++++.+ .+ + .+|+..| .+.++++++.. ++.. +.....+++|+||++ +|++++
T Consensus 196 ~~~~~~~~d~~~~aa~~l------~~-g--~~VvlkG-~~~~i~~~~~~-~~~~---~~~~~~~t~GtGD~L-ag~iaa~ 260 (311)
T 3bgk_A 196 LTIPEQIEAATQTALAHF------PK-E--TILVAKS-HQTKIYQGQKI-GHIQ---VGGPYQATGGMGDTL-AGMIAGF 260 (311)
T ss_dssp CCSTTCCHHHHHHHHTTS------CT-T--CEEEECS-SSCEEEETTEE-EEEC---CCCGGGCSTTHHHHH-HHHHHHH
T ss_pred CCCCcchhhHHHHHHHHH------hc-C--CEEEEeC-CCeEEEECCEE-EEEC---CCCCCCCCCcHHHHH-HHHHHHH
Confidence 543222 234 4555555 44 3 2444445 55666664444 3332 233678999999998 555555
Q ss_pred hhc-CCCHHHHHHHHhHHHHHHhh
Q 020650 288 LVQ-EKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 288 l~~-g~~~~~a~~~A~~~Aa~~~~ 310 (323)
|.+ |.++.+|+.+|+.+.+...+
T Consensus 261 lA~~g~~~~eA~~~A~~~~~~ag~ 284 (311)
T 3bgk_A 261 VAQFHTDRFEVAAAAVFLHSYIAD 284 (311)
T ss_dssp HHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHH
Confidence 568 99999999999877776443
No 64
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=98.96 E-value=2e-08 Score=84.89 Aligned_cols=161 Identities=15% Similarity=0.090 Sum_probs=105.0
Q ss_pred chhhhhccccEEEEeccccccCH---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEEeCHHHHHH
Q 020650 132 ENWALVEKAKYFYIAGFFLTVSP---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEART 207 (323)
Q Consensus 132 ~~~~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~e~~~ 207 (323)
+..+..+.++.++++.-. .++ +.+...++.+++.+.++++||..........+..+.++ ...+++.+|..|+..
T Consensus 51 e~~e~~~~a~alvIn~G~--l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~ 128 (273)
T 3dzv_A 51 EFPQMFQQTSALVLNLGH--LSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRT 128 (273)
T ss_dssp GHHHHHTTCSEEEEECCS--CCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHH
T ss_pred HHHHHHHHCCeEEEecCC--CChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHH
Confidence 355667889999987422 233 34556667788889999999954221111222223332 368999999999999
Q ss_pred HHhhcC----CCC-------C---CHHHHHHHHhcCCccccCCc-cEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccC
Q 020650 208 FSKVQG----WET-------D---DVEEIALKLSQWPKASEIRK-RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVD 272 (323)
Q Consensus 208 l~~~~~----~~~-------~---~~~~~~~~l~~~~~~~~~~~-~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d 272 (323)
|++... .+. + +..++++.+ .+... ..+++| |..- +++++++.+.++.- ....-+
T Consensus 129 L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~l------a~~~~~~~Vvlk-G~~D-~i~dg~~~~~~~~G---~~~~~~ 197 (273)
T 3dzv_A 129 FCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQ------TQKFPQTVFLAT-GIQD-VLVSQEQVIVLQNG---VPELDC 197 (273)
T ss_dssp HTTCCCC-------CGGGSHHHHHHHHHHHHHH------HHHSTTCEEEEE-SSSE-EEECSSCEEEECCC---CGGGGS
T ss_pred HhCCcccccccccccccchhhhhHHHHHHHHHH------HHHhCCeEEEEE-CCee-EEEcCCEEEEeCCC---CcccCC
Confidence 988542 121 1 344566676 33334 667777 4333 45566666665432 114456
Q ss_pred CCCcchHHHHHHHHHhhcCCCHHHHHHHHhHHH
Q 020650 273 TNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTS 305 (323)
Q Consensus 273 ~tGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~A 305 (323)
++|.||++.|.+.+.+.+|.++.+|+..|...=
T Consensus 198 v~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~~ 230 (273)
T 3dzv_A 198 FTGTGDLVGALVAALLGEGNAPMTAAVAAVSYF 230 (273)
T ss_dssp STTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 799999999999999999999999998887653
No 65
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=98.95 E-value=3.7e-09 Score=91.41 Aligned_cols=155 Identities=18% Similarity=0.160 Sum_probs=92.9
Q ss_pred hhhccccEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCchhHHHHHHHHHHhhc--CCCcEEEeCHHHHHHHHh
Q 020650 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAPFICEFFKDALEKVL--PYMDYIFGNETEARTFSK 210 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~l--~~~dvl~~n~~e~~~l~~ 210 (323)
..++..+.+.++. .+..+.+....+.+..+. .+.++++|+....+.... ..++ +..+++.+|..|++.|++
T Consensus 107 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~----~~~l~~~~~~viTPN~~E~~~L~g 181 (310)
T 2r3b_A 107 NVVEQADVILIGP-GLGLDATAQQILKMVLAQHQKQQWLIIDGSAITLFSQG----NFSLTYPEKVVFTPHQMEWQRLSH 181 (310)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTCEEEEETHHHHHHHHT----TCCCSSGGGEEEECCHHHHHHHHC
T ss_pred HHhccCCEEEEeC-CCCCCHHHHHHHHHHHHhcCCCCcEEEcCCcchhcccc----hhhhcCCCCEEEcCCHHHHHHHhC
Confidence 4456788998863 122234333333333333 478999999644321110 0223 357899999999999987
Q ss_pred hcCCCCC-CH-HHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHh
Q 020650 211 VQGWETD-DV-EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL 288 (323)
Q Consensus 211 ~~~~~~~-~~-~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l 288 (323)
....+.+ +. .++++.+ ++ +|+..| .+.++++++..+ +.. +.....+++|+||++.+.+...|
T Consensus 182 ~~~~~~~~~~a~~aA~~l---------g~--~VvlKG-~~~vi~~~~~~~-~~~---~g~~~~~t~GtGD~Lag~Iaa~l 245 (310)
T 2r3b_A 182 LPIEQQTLANNQRQQAKL---------GS--TIVLKS-HRTTIFHAGEPF-QNT---GGNPGMATGGTGDTLAGIIAGFL 245 (310)
T ss_dssp CCGGGCCHHHHHHHHHHH---------TS--EEEECS-TTCEEECSSSCE-ECC---CCCGGGCSTTHHHHHHHHHHHHH
T ss_pred CCCCcccchHHHHHHHHh---------Cc--EEEEeC-CceEEEECCEEE-EEC---CCCCCCCCCChHHHHHHHHHHHH
Confidence 5332222 33 5555555 32 444445 556666633343 332 23356789999999755444445
Q ss_pred hcCCCHHHHHHHHhHHHHHHhh
Q 020650 289 VQEKPIEECVRAGCYTSHVIIQ 310 (323)
Q Consensus 289 ~~g~~~~~a~~~A~~~Aa~~~~ 310 (323)
.+|.++.+|+.+|+.+.+....
T Consensus 246 A~g~~~~eA~~~A~~~~~~ag~ 267 (310)
T 2r3b_A 246 AQFKPTIETIAGAVYLHSLIGD 267 (310)
T ss_dssp HHSCSSHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHHH
Confidence 6999999999999877766443
No 66
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.78 E-value=5e-08 Score=89.68 Aligned_cols=159 Identities=14% Similarity=0.090 Sum_probs=100.6
Q ss_pred hhhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcC
Q 020650 134 WALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 213 (323)
Q Consensus 134 ~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~ 213 (323)
.+.++.+|.+.++. .+..+.+....+.+.+++.+.++++|+....... .+.+ +..+..+++.+|..|+..|++...
T Consensus 315 ~~~~~~~davviGp-Glg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l~--~~ll-~~~~~~~vlTPN~~E~~~L~g~~~ 390 (502)
T 3rss_A 315 LELSKDVDVVAIGP-GLGNNEHVREFVNEFLKTLEKPAVIDADAINVLD--TSVL-KERKSPAVLTPHPGEMARLVKKTV 390 (502)
T ss_dssp HHHHTTCSEEEECT-TCCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCC--HHHH-HHCSSCEEECCCHHHHHHHHTCCH
T ss_pred HHHhccCCEEEEeC-CCCCCHHHHHHHHHHHHhcCCCEEEeCcccchhc--HHHH-hccCCCEEEeCCHHHHHHHhCCCc
Confidence 34567899999974 2222333333333355677899999986432211 1212 223567899999999999987432
Q ss_pred CC-CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcCC
Q 020650 214 WE-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 292 (323)
Q Consensus 214 ~~-~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~ 292 (323)
.+ .++ .++++.+. +.... +|+..|. +.++++++..+..+ . .....+++|+||+|.+.+.+.|.+|.
T Consensus 391 ~~~~~d-~~aa~~la------~~~~~-~VvlKG~-~~vi~~~~~~~~~~-~---g~~~~at~GsGD~Lag~iaa~lA~g~ 457 (502)
T 3rss_A 391 GDVKYN-YELAEEFA------KENDC-VLVLKSA-TTIVTDGEKTLFNI-T---GNTGLSKGGSGDVLTGMIAGFIAQGL 457 (502)
T ss_dssp HHHTTC-HHHHHHHH------HHHTS-EEEECSS-SEEEECSSCEEEEC-C---CCGGGSSTTHHHHHHHHHHHHHHTTC
T ss_pred cchHHH-HHHHHHHH------HHcCC-EEEEeCC-CeEEEcCCEEEEEC-C---CCCccccCCchHHHHHHHHHHHhCCC
Confidence 11 234 56666663 22222 4555564 44556665444332 1 23567899999999888888888999
Q ss_pred CHHHHHHHHhHHHHHHh
Q 020650 293 PIEECVRAGCYTSHVII 309 (323)
Q Consensus 293 ~~~~a~~~A~~~Aa~~~ 309 (323)
++.+|+.+|+.+-+.+-
T Consensus 458 ~~~~Aa~~A~~~hg~Ag 474 (502)
T 3rss_A 458 SPLEASTVSVYLHGFAA 474 (502)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999987776654
No 67
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.64 E-value=1.4e-07 Score=80.15 Aligned_cols=144 Identities=16% Similarity=0.127 Sum_probs=93.6
Q ss_pred hccccEEEEeccccccCH-HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc---CCCcEEEeCHHHHHHHHhhc
Q 020650 137 VEKAKYFYIAGFFLTVSP-DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL---PYMDYIFGNETEARTFSKVQ 212 (323)
Q Consensus 137 ~~~~~~v~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~e~~~l~~~~ 212 (323)
++..|++.+++ .+.. +...++++.+.+.+.++++|.....+ ..+ ...+++.+|..|++.|++..
T Consensus 96 l~~~davviGP---Glg~~~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l~~~~~~~vlTPN~~E~~~L~g~~ 163 (279)
T 3rpz_A 96 EETYRAIAIGP---GLPQTESVQQAVDHVLTADCPVILDAGALAK---------RTYPKREGPVILTPHPGEFFRMTGVP 163 (279)
T ss_dssp SSCCSEEEECT---TCCCCHHHHHHHHHHTTSSSCEEECGGGCCS---------CCCCCCSSCEEECCCHHHHHHHHCCC
T ss_pred ccCCCEEEECC---CCCCCHHHHHHHHHHHhhCCCEEEECCccch---------hhhhhccCCEEEecCHHHHHHHhCCC
Confidence 46789999964 3332 34566677776778899999865431 222 35678889999999998743
Q ss_pred CCC-CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhcC
Q 020650 213 GWE-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 291 (323)
Q Consensus 213 ~~~-~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g 291 (323)
..+ .++..++++.+. +.....++ -.|. +.++++++..+++... ......++|+||++.+.+...+.+|
T Consensus 164 ~~~~~~d~~~aa~~la------~~~~~~Vv-lKG~-~~vi~~~~g~~~~~~~---g~~~~at~GtGD~Lag~iaa~lA~g 232 (279)
T 3rpz_A 164 VNELQKKRAEYAKEWA------AQLQTVIV-LKGN-QTVIAFPDGDCWLNPT---GNGALAKGGTGDTLTGMILGMLCCH 232 (279)
T ss_dssp HHHHTTSHHHHHHHHH------HHHTSEEE-ECST-TCEEECTTSCEEECCC---CCGGGCSTTHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHH------HHcCeEEE-EeCC-CcEEECCCceEEEeCC---CCCCCCCCChHHHHHHHHHHHHHCC
Confidence 211 246667777773 22223344 4454 4455565543333322 2256789999998766666667799
Q ss_pred CCHHHHHHHHhH
Q 020650 292 KPIEECVRAGCY 303 (323)
Q Consensus 292 ~~~~~a~~~A~~ 303 (323)
.++.+|+..|..
T Consensus 233 ~~~~~A~~~a~~ 244 (279)
T 3rpz_A 233 EDPKHAVLNAVY 244 (279)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999999875
No 68
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.52 E-value=4.2e-06 Score=75.40 Aligned_cols=167 Identities=13% Similarity=0.017 Sum_probs=94.4
Q ss_pred ceeecCchHHHHHHHHHHhcCCCC-cEEEEeeeecCchhHHHHHHHHHcCceeEEe-----------e-c-C-CCCceeE
Q 020650 38 VEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYY-----------E-D-E-SASTGTC 102 (323)
Q Consensus 38 ~~~~~GG~~~n~a~~l~~l~g~g~-~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~-----------~-~-~-~~~t~~~ 102 (323)
...+.||.|.-+|..+++ +| . +|.+.++.... ...+.| ..+|-.-.+ + . + +..--..
T Consensus 112 ~~~~~GGnA~imAn~La~-lg--~~~Vi~~~p~~sk----~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~ 183 (474)
T 3drw_A 112 EEERLGGQAGIIANTLAG-LK--IRKVIAYTPFLPK----RLAELF-KKGVLYPVVENGELQFKPIQEAYREGDPLKINR 183 (474)
T ss_dssp SEEEEESHHHHHHHHHHH-TT--CSEEEECCSCCCH----HHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTCCCCEEE
T ss_pred ceEecCChHHHHHHHHHH-cC--CCcEEEecCcCCH----HHHHhc-CCcceeecccCCceeecCchhhhccCCCCCcEE
Confidence 357899999999999997 45 7 57777776653 334444 233322211 0 0 0 1112222
Q ss_pred EEEEeCCccc---------------eeecccccc-cCC-cccCCCcchhhhh-ccccEEEEeccccccC--------HHH
Q 020650 103 AVCVVGGERS---------------LVANLSAAN-CYK-SEHLKKPENWALV-EKAKYFYIAGFFLTVS--------PDS 156 (323)
Q Consensus 103 ~~~~~~g~~~---------------~~~~~~~~~-~~~-~~~~~~~~~~~~~-~~~~~v~i~~~~~~~~--------~~~ 156 (323)
++.+..|++. ++.....+. .+. .+++. +....+ +.+|+++++|+...-. .+.
T Consensus 184 I~Ey~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~--~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~ 261 (474)
T 3drw_A 184 IFEFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIK--PFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYY 261 (474)
T ss_dssp EEEECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTG--GGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHH
T ss_pred EEEcCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHH--HHHHHhhcCCCEEEEeccccccccccccccHHHH
Confidence 3333334332 222211111 111 11111 122333 3699999999985333 122
Q ss_pred ---HHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC
Q 020650 157 ---IQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 214 (323)
Q Consensus 157 ---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~ 214 (323)
+.+.++..+..++++-+.+.+..-.+.....+..+++.+|.+-+|++|+..+.+..+.
T Consensus 262 l~~~~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~lg~ 322 (474)
T 3drw_A 262 LRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLGY 322 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhcC
Confidence 2344555567788888888664433334555678999999999999999999886554
No 69
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.38 E-value=1.4e-05 Score=74.16 Aligned_cols=161 Identities=13% Similarity=0.065 Sum_probs=102.9
Q ss_pred hhhhhcc-ccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHHHHH
Q 020650 133 NWALVEK-AKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFS 209 (323)
Q Consensus 133 ~~~~~~~-~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~~l~ 209 (323)
..+..+. ++.++|+.-.+. +.+....+.+.+++.+.++++|+..........+..+.+++ ..+++.+|..|+..|+
T Consensus 299 ~~e~~~~~~~alvin~G~l~-~~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~ 377 (540)
T 3nl6_A 299 VNDLAAIPHATLLLNTGSVA-PPEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLA 377 (540)
T ss_dssp HHHHTTSTTCEEEEESSCSC-CHHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHHT
T ss_pred HHHHHhccCCeEEEeCCCCC-HHHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHHh
Confidence 4455666 899998753322 25677777788889999999999543222223344567776 7899999999999998
Q ss_pred hhc-----CCC------CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeC-------------------CeeeE
Q 020650 210 KVQ-----GWE------TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-------------------GKLKK 259 (323)
Q Consensus 210 ~~~-----~~~------~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~-------------------~~~~~ 259 (323)
+.. |.+ .++..++++.+ .......+++| |+.- ++.++ +..+.
T Consensus 378 g~~~~~~~GVds~~~~~~~d~~~aA~~l------A~~~~~vVvlk-G~~D-~I~dg~~~~~~~~~~~~~~~~~~~~~~~~ 449 (540)
T 3nl6_A 378 ELNKERMKGVDASSGISNELLIQATKIV------AFKYKTVAVCT-GEFD-FIADGTIEGKYSLSKGTNGTSVEDIPCVA 449 (540)
T ss_dssp TC--------------CCHHHHHHHHHH------HHHTTSEEEEC-SSSE-EEEECCGGGBCCSSSCCSSCCTTSSCEEE
T ss_pred CCCcccccccccccccCHHHHHHHHHHH------HHHhCCEEEEc-CCCe-EEECCCccccccccccccccccCCccEEE
Confidence 743 222 13445666666 33333556665 5433 34455 34455
Q ss_pred EeceeCCCCcccCCCCcchHHHHHHHHHhhcCC---CHHHHHHHHhHH
Q 020650 260 FPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK---PIEECVRAGCYT 304 (323)
Q Consensus 260 ~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~g~---~~~~a~~~A~~~ 304 (323)
++.-.. .-.-.++|.||++.+.+.+.+..+. ++.+|+..|..+
T Consensus 450 ~~~G~~--~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~~ 495 (540)
T 3nl6_A 450 VEAGPI--EIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVML 495 (540)
T ss_dssp EECSCC--GGGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHH
T ss_pred ECCCCh--hhccCccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHHH
Confidence 443210 1234579999999998888888887 688887776554
No 70
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.27 E-value=2.2e-05 Score=65.73 Aligned_cols=158 Identities=14% Similarity=0.044 Sum_probs=92.3
Q ss_pred hhhhhccccEEEEeccccccCHH---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEEeCHHHHHHH
Q 020650 133 NWALVEKAKYFYIAGFFLTVSPD---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTF 208 (323)
Q Consensus 133 ~~~~~~~~~~v~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~e~~~l 208 (323)
..+..+.++.++++--+ ++++ ......+.+.+.+.|+++||..-.......+..++++ ...+++.+|..|...|
T Consensus 50 ~~e~~~~a~al~iNiGt--l~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L 127 (265)
T 3hpd_A 50 LEEMIRLADAVVINIGT--LDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHHCSEEEEECTT--CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHHCCeEEEECCC--CChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHH
Confidence 45666778888886322 3343 3445557778899999999954221111122223332 3689999999999999
Q ss_pred HhhcCC----C-----CCCHHHHHHHHhcCCccccCCccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchH
Q 020650 209 SKVQGW----E-----TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 279 (323)
Q Consensus 209 ~~~~~~----~-----~~~~~~~~~~l~~~~~~~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDa 279 (323)
.+.... + .++..++++.+. ......+++| |+. -++.++++.+.+..-. | ..-..+|.||+
T Consensus 128 ~g~~~~~~gvds~~~~~~d~~~~a~~lA------~~~~~vVvlk-G~~-d~I~dg~~~~~~~~G~-~--~m~~vtGtGc~ 196 (265)
T 3hpd_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAA------REFNTTVAVT-GAV-DYVSDGRRTFAVYNGH-E--LLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHH------HHTTSEEEEE-SSS-EEEECSSCEEEECCCC-G--GGGGSTTHHHH
T ss_pred hcccCCCCCccCccccHHHHHHHHHHHH------HHhCCEEEEe-CCC-eEEEcCCEEEEECCCC-h--HhhcCCccchH
Confidence 875422 1 123445666662 2223345555 543 3455666666554321 1 23345899999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHHhHH
Q 020650 280 FVGGFLSQLVQEKPIEECVRAGCYT 304 (323)
Q Consensus 280 f~ag~~~~l~~g~~~~~a~~~A~~~ 304 (323)
..+-+.+.+..+ ++.+|...|..+
T Consensus 197 Lsg~iaa~lA~~-~~~~Aa~~a~~~ 220 (265)
T 3hpd_A 197 VAALTGAFVAVT-EPLKATTSALVT 220 (265)
T ss_dssp HHHHHHHHHTTS-CHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-ChHHHHHHHHHH
Confidence 877666666666 555666655543
No 71
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=97.96 E-value=0.00041 Score=62.64 Aligned_cols=164 Identities=11% Similarity=0.024 Sum_probs=90.9
Q ss_pred ecCchHHHHHHHHHHhcCCCCcEEE--EeeeecCchhHHHHHHHHHcCceeEEee------------c-CCCCceeEEEE
Q 020650 41 IAGGATQNSIRVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSKLAGVNVHYYE------------D-ESASTGTCAVC 105 (323)
Q Consensus 41 ~~GG~~~n~a~~l~~l~g~g~~v~~--~~~vG~D~~g~~i~~~l~~~gi~~~~~~------------~-~~~~t~~~~~~ 105 (323)
+.||.+..+|..++. +| .++.+ ++.+|. .+.+.|...+|..-.+. . .+..--..++.
T Consensus 109 ~~GGnA~imAn~la~-lg--~~~vl~~~~~l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~E 180 (455)
T 1ua4_A 109 RMGGQAGIMANLLGG-VY--GVPVIVHVPQLSR-----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYE 180 (455)
T ss_dssp EEESHHHHHHHHHTT-TT--CCCEEECCSCCCH-----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEE
T ss_pred ccCCcHHHHHHHHHH-cC--CCEEEEeCCCCCH-----HHHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEE
Confidence 899999999888876 44 88877 666664 34455543334331111 0 12222333444
Q ss_pred EeCCccce-eecccccc-----cCCcccCCC-cchhhhhc----cccEEEEeccccccCH---HHHHHHHH---HHHhCC
Q 020650 106 VVGGERSL-VANLSAAN-----CYKSEHLKK-PENWALVE----KAKYFYIAGFFLTVSP---DSIQLVAE---HAAANN 168 (323)
Q Consensus 106 ~~~g~~~~-~~~~~~~~-----~~~~~~~~~-~~~~~~~~----~~~~v~i~~~~~~~~~---~~~~~~~~---~~~~~~ 168 (323)
++.|++.. +..+.+++ ......+.. +++.+.+. .+|+++++|++..-.. +.....++ .....+
T Consensus 181 f~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~ 260 (455)
T 1ua4_A 181 FPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNERE 260 (455)
T ss_dssp ECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCC
Confidence 45665421 11111111 111112211 22333444 4999999999842221 33333322 334566
Q ss_pred CeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcC
Q 020650 169 KVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 213 (323)
Q Consensus 169 ~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~ 213 (323)
.++-+++.+..-.+.....+ .+++++|.+-+|++|+..+....+
T Consensus 261 ~~iH~ElAs~~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~lg 304 (455)
T 1ua4_A 261 IPVHLEFAFTPDEKVREEIL-NVLGMFYSVGLNEVELASIMEILG 304 (455)
T ss_dssp CCEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTT
T ss_pred ceEEEEeCCccCHHHHHHHH-hhhccCcccccCHHHHHHHHHHhC
Confidence 78888886644333335555 899999999999999998877644
No 72
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=97.64 E-value=0.0007 Score=60.98 Aligned_cols=75 Identities=12% Similarity=0.010 Sum_probs=50.8
Q ss_pred ccccEEEEeccccccC---HH---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhh
Q 020650 138 EKAKYFYIAGFFLTVS---PD---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 211 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~ 211 (323)
..+|+++++|++..-. ++ ...+.++..+..++++-+.+.+..-.+.....+ .+++++|.+-+|++|+..+...
T Consensus 227 ~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~ 305 (457)
T 1l2l_A 227 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLNEVELASVVSV 305 (457)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCSSHHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred cCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHH
Confidence 4499999999985333 22 122333344567788888886644333345556 8999999999999999886544
Q ss_pred cC
Q 020650 212 QG 213 (323)
Q Consensus 212 ~~ 213 (323)
.+
T Consensus 306 lg 307 (457)
T 1l2l_A 306 MG 307 (457)
T ss_dssp TT
T ss_pred cC
Confidence 33
No 73
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.49 E-value=0.00059 Score=62.19 Aligned_cols=149 Identities=17% Similarity=0.169 Sum_probs=88.5
Q ss_pred ccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCC--C
Q 020650 138 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW--E 215 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~--~ 215 (323)
+..|.+.+++ .+..+++.+..++ +. . ++++|-..-. .. .+...++...|+.+|..|++.|++..+. +
T Consensus 291 ~~~~a~~iGP-GlG~~~~~l~~~l---~~-~-p~VlDADaL~----~~-~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~ 359 (475)
T 3k5w_A 291 NLLSAFALGM-GLENIPKDFNRWL---EL-A-PCVLDAGVFY----HK-EILQALEKEAVLTPHPKEFLSLLNLVGINIS 359 (475)
T ss_dssp SSCSEEEECT-TCSSCCTTHHHHH---HH-S-CEEEEGGGGG----SG-GGGTTTTSSEEEECCHHHHHHHHHHTSCCCC
T ss_pred cCCCEEEEcC-CCCCCHHHHHHHH---hc-C-CEEEECcccC----Cc-hhhhccCCCEEECCCHHHHHHHhCCccCCCC
Confidence 5678888864 2222222133333 23 4 8888875422 11 1223445668899999999999986221 1
Q ss_pred ----CCCHHHHHHHHhcCCccccCC-ccEEEEeeCCCceEEeeCCeeeEEeceeCCCCcccCCCCcchHHHHHHHHHhhc
Q 020650 216 ----TDDVEEIALKLSQWPKASEIR-KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 290 (323)
Q Consensus 216 ----~~~~~~~~~~l~~~~~~~~~~-~~~vvit~G~~G~~~~~~~~~~~~~~~~~~~~~~~d~tGAGDaf~ag~~~~l~~ 290 (323)
.++..++++.+ .+.. ...++++ |..- +++++++.+..+. ...-..+.|.||++.+.+.+.|.+
T Consensus 360 ~~~~~~d~~~aa~~l------a~~~g~~~VvlK-G~~~-vI~~~~~~~~~~~----g~~~mat~GtGdvLsg~Iaa~lA~ 427 (475)
T 3k5w_A 360 MLELLDNKLEIARDF------SQKYPKVVLLLK-GANT-LIAHQGQVFINIL----GSVALAKAGSGDVLAGLILSLLSQ 427 (475)
T ss_dssp TTSGGGSCC--CHHH------HHHCTTEEEEEC-SSSE-EEEETTEEEEECC----CCGGGCSTTHHHHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHH------HHHcCCeEEEEe-CCCC-EEECCCEEEEECC----CCCCCCCCCHHHHHHHHHHHHHHc
Confidence 12344555665 2322 3445555 5443 4445555544332 113456899999999999999999
Q ss_pred CCCHHHHHHHHhHHHHHHh
Q 020650 291 EKPIEECVRAGCYTSHVII 309 (323)
Q Consensus 291 g~~~~~a~~~A~~~Aa~~~ 309 (323)
|.++.+|+..|..+-+..-
T Consensus 428 g~~~~~Aa~~a~~lhg~ag 446 (475)
T 3k5w_A 428 NYTPLDAAINASLAHALAS 446 (475)
T ss_dssp TCCHHHHHHHHHHHHHHGG
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9999999888766554443
No 74
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=96.41 E-value=0.051 Score=49.05 Aligned_cols=164 Identities=11% Similarity=-0.005 Sum_probs=89.9
Q ss_pred ecCchHHHHHHHHHHhcCCCCcEEE--EeeeecCchhHHHHHHHHHcCceeEEeec-------------CCCCceeEEEE
Q 020650 41 IAGGATQNSIRVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSKLAGVNVHYYED-------------ESASTGTCAVC 105 (323)
Q Consensus 41 ~~GG~~~n~a~~l~~l~g~g~~v~~--~~~vG~D~~g~~i~~~l~~~gi~~~~~~~-------------~~~~t~~~~~~ 105 (323)
+.||.+.-+|..++. +| .++.+ ++.+| +...+.|...+|..-.+.. .+..--..++.
T Consensus 117 ~mGGnAgimAn~la~-lg--~~~vl~~~~~~s-----~~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~E 188 (467)
T 1gc5_A 117 RIGGQAGIMANLLGG-VY--RIPTIVHVPQNP-----KLQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYE 188 (467)
T ss_dssp EEESHHHHHHHHHHH-TS--CCCEEECCSCCC-----HHHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEE
T ss_pred ccCccHHHHHHHHHh-cC--CCEEEEcCCCCC-----HHHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEE
Confidence 999999999999987 55 77766 55444 4445555434443221110 11222223333
Q ss_pred EeCCccce-eecccccccC---Ccc--cCCC-cchhhhhc----cccEEEEeccccccC----HH----HHH---HHHHH
Q 020650 106 VVGGERSL-VANLSAANCY---KSE--HLKK-PENWALVE----KAKYFYIAGFFLTVS----PD----SIQ---LVAEH 163 (323)
Q Consensus 106 ~~~g~~~~-~~~~~~~~~~---~~~--~~~~-~~~~~~~~----~~~~v~i~~~~~~~~----~~----~~~---~~~~~ 163 (323)
+..|++.- +..+.+++-+ ++. .+.. +++.+.+. .+|+++++|++..-. .+ -+. +.++.
T Consensus 189 y~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~ 268 (467)
T 1gc5_A 189 FPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNI 268 (467)
T ss_dssp ECSSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHH
T ss_pred cCCCCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHh
Confidence 44454321 1222222111 111 1211 23334444 499999999985322 12 122 22233
Q ss_pred HHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcC
Q 020650 164 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 213 (323)
Q Consensus 164 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~ 213 (323)
+...++++-+.+.+..-.+.....+ .+++++|.+-+|++|+..+....+
T Consensus 269 l~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~lg 317 (467)
T 1gc5_A 269 LNRYNVKSHFEFAYTANRRVREALV-ELLPKFTSVGLNEVELASIMEIIG 317 (467)
T ss_dssp HHHTTCEEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTT
T ss_pred hcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHHcC
Confidence 2456788888886544333345556 899999999999999987665444
No 75
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=66.33 E-value=5.6 Score=35.89 Aligned_cols=32 Identities=25% Similarity=0.387 Sum_probs=22.6
Q ss_pred eeEEeceeCCCCcccCCCCcchHH-HHHHHHHhhc
Q 020650 257 LKKFPVIVLPKDKLVDTNGAGDAF-VGGFLSQLVQ 290 (323)
Q Consensus 257 ~~~~~~~~~~~~~~~d~tGAGDaf-~ag~~~~l~~ 290 (323)
...+|..-+. +++.|+|.||+| .+||++.|..
T Consensus 432 i~~~P~lv~~--~P~~TVGLGDtISa~gfv~~l~~ 464 (467)
T 1gc5_A 432 LAFVPTKIVA--SPKSTVGIGDTISSSAFVSEFGM 464 (467)
T ss_dssp EEEEECCCCS--SCSCCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEehhhcC--CCCceecCCcchhhHHHHHHHHH
Confidence 3344443332 788999999999 6689988753
No 76
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=60.18 E-value=44 Score=25.25 Aligned_cols=79 Identities=10% Similarity=0.092 Sum_probs=45.3
Q ss_pred cEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEe-----CHHHHHHHHhhcCCC
Q 020650 141 KYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFG-----NETEARTFSKVQGWE 215 (323)
Q Consensus 141 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~-----n~~e~~~l~~~~~~~ 215 (323)
+.|.++|--+.+.++.+.++++.+++.|..+.+.-.... ..+.++.+++..|.+.+ +.+....+.+. +
T Consensus 5 ~~v~~tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l----~~~~~~~l~~~~d~v~isld~~~~~~~~~~~g~---~ 77 (182)
T 3can_A 5 GGVTFCGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLA----RKETVDEVMRNCELLLIDLKSMDSTVHQTFCDV---P 77 (182)
T ss_dssp CCEEECSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCC----CHHHHHHHHHTCSEEEEECCCSCHHHHHHHHSS---C
T ss_pred CEEEEEcccccCCHHHHHHHHHHHHHCCCcEEEECCCCC----CHHHHHHHHhhCCEEEEECCCCCHHHHHHHhCC---C
Confidence 455666634556677778999999998888777765543 22334455555676554 34444444432 2
Q ss_pred CCCHHHHHHHH
Q 020650 216 TDDVEEIALKL 226 (323)
Q Consensus 216 ~~~~~~~~~~l 226 (323)
.+...+.++.+
T Consensus 78 ~~~i~~~i~~l 88 (182)
T 3can_A 78 NELILKNIRRV 88 (182)
T ss_dssp SHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 23344444444
No 77
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=58.34 E-value=32 Score=27.63 Aligned_cols=51 Identities=18% Similarity=0.172 Sum_probs=40.4
Q ss_pred ccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEE
Q 020650 138 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIF 199 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~ 199 (323)
.+.|.+.++|. .++..+.+.++++..|+...|+++.++.+. .+.+.+|.++
T Consensus 30 ~GtD~i~vGGs-~gvt~~~~~~~v~~ik~~~~Pvvlfp~~~~----------~v~~gaD~~l 80 (228)
T 3vzx_A 30 SGTDAVIIGGS-DGVTEDNVLRMMSKVRRFLVPCVLEVSAIE----------AIVPGFDLYF 80 (228)
T ss_dssp SSCSEEEECCC-SCCCHHHHHHHHHHHTTSSSCEEEECSCGG----------GCCSCCSEEE
T ss_pred cCCCEEEECCc-CCCCHHHHHHHHHHhhccCCCEEEeCCCHH----------HccccCCEEE
Confidence 45899999984 456788899999999888899999887643 4567888776
No 78
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=49.12 E-value=58 Score=26.26 Aligned_cols=62 Identities=13% Similarity=-0.012 Sum_probs=38.0
Q ss_pred hhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEE
Q 020650 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIF 199 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~ 199 (323)
+.+...|+|.+|-..+-. + +.++++.+...++++++--....+..+.-+....+++.||.+.
T Consensus 86 ~~~~~~dvViIDEaQF~~--~-v~el~~~l~~~gi~VI~~GL~~DF~~~~F~~~~~Ll~~AD~Vt 147 (234)
T 2orv_A 86 QEALGVAVIGIDEGQFFP--D-IVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVV 147 (234)
T ss_dssp HHHTTCSEEEESSGGGCT--T-HHHHHHHHHHTTCEEEEECCSBCTTSSBCTTGGGGGGGCSEEE
T ss_pred HHhccCCEEEEEchhhhh--h-HHHHHHHHHhCCCEEEEEecccccccCCcccHHHHHHhcccEE
Confidence 344678999998665432 2 7788888888898877644321111111122456778888776
No 79
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=44.07 E-value=39 Score=27.62 Aligned_cols=62 Identities=18% Similarity=0.092 Sum_probs=46.0
Q ss_pred hhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEEeCHHHHH
Q 020650 136 LVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEAR 206 (323)
Q Consensus 136 ~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~e~~ 206 (323)
...++|++.+.... ++.+.+.++++.+++.|..+.++..+.. .++..+. .+|++-+|..++.
T Consensus 120 ~~~GAD~ilLi~a~--l~~~~l~~l~~~a~~lGl~~lvEv~~~e-------E~~~A~~l~g~~iIGinnr~l~ 183 (251)
T 1i4n_A 120 SSVGADAILIIARI--LTAEQIKEIYEAAEELGMDSLVEVHSRE-------DLEKVFSVIRPKIIGINTRDLD 183 (251)
T ss_dssp HHTTCSEEEEEGGG--SCHHHHHHHHHHHHTTTCEEEEEECSHH-------HHHHHHTTCCCSEEEEECBCTT
T ss_pred HHcCCCEEEEeccc--CCHHHHHHHHHHHHHcCCeEEEEeCCHH-------HHHHHHhcCCCCEEEEeCcccc
Confidence 34678999987643 4668899999999999999999998533 2444443 5899988876543
No 80
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=43.00 E-value=47 Score=23.60 Aligned_cols=77 Identities=9% Similarity=0.153 Sum_probs=52.7
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEeCHHHHHHHHhhcCCCCCC
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDD 218 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~e~~~l~~~~~~~~~~ 218 (323)
.++.+..+|+ ++.+.+..+.+.++.+++.+..|+... .+..+..+.+.++.+...++.+.+. +.+.-+
T Consensus 26 ~~~iI~t~Gs---i~~~~l~~I~~~~~~r~VIi~TD~D~~--GekIRk~i~~~lp~~~hafi~r~~~-------gVE~a~ 93 (119)
T 2fcj_A 26 PVVIVCTNGT---ISDARLEELADELEGYDVYLLADADEA--GEKLRRQFRRMFPEAEHLYIDRAYR-------EVAAAP 93 (119)
T ss_dssp CCEEEECCSC---CCHHHHHHHHHHTTTSEEEEECCSSHH--HHHHHHHHHHHCTTSEEECCCTTTC-------STTTSC
T ss_pred CCCEEEeCCc---cCHHHHHHHHHHhcCCCEEEEECCCcc--HHHHHHHHHHHCCCCcEEeccCCcc-------CcccCC
Confidence 5677777764 677777777777777777777787542 2345566778899999999887763 444455
Q ss_pred HHHHHHHHh
Q 020650 219 VEEIALKLS 227 (323)
Q Consensus 219 ~~~~~~~l~ 227 (323)
.++..+.|.
T Consensus 94 ~~~I~~aL~ 102 (119)
T 2fcj_A 94 IWHLAQVLL 102 (119)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666663
No 81
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=42.12 E-value=34 Score=29.16 Aligned_cols=66 Identities=11% Similarity=0.059 Sum_probs=38.6
Q ss_pred CCccceEEEeCCceeeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEeeeecCc-------
Q 020650 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDK------- 73 (323)
Q Consensus 1 m~~~~~i~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~------- 73 (323)
|+++|+|+++.+. ..+ ..||....+...+.. + .|.+|.+++.-..+.
T Consensus 1 M~~~mkIl~v~~~------~~p------------------~~gG~~~~~~~l~~~-L-~g~~v~v~~~~~~~~~~~~~~~ 54 (394)
T 3okp_A 1 MSASRKTLVVTND------FPP------------------RIGGIQSYLRDFIAT-Q-DPESIVVFASTQNAEEAHAYDK 54 (394)
T ss_dssp ---CCCEEEEESC------CTT------------------SCSHHHHHHHHHHTT-S-CGGGEEEEEECSSHHHHHHHHT
T ss_pred CCCCceEEEEeCc------cCC------------------ccchHHHHHHHHHHH-h-cCCeEEEEECCCCccchhhhcc
Confidence 8888899988652 111 167766555544444 4 368888887655432
Q ss_pred -------------------hhHHHHHHHHHcCceeEEe
Q 020650 74 -------------------FGEEMKKNSKLAGVNVHYY 92 (323)
Q Consensus 74 -------------------~g~~i~~~l~~~gi~~~~~ 92 (323)
....+.+.+++...|.-++
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~Dvv~~ 92 (394)
T 3okp_A 55 TLDYEVIRWPRSVMLPTPTTAHAMAEIIREREIDNVWF 92 (394)
T ss_dssp TCSSEEEEESSSSCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred ccceEEEEccccccccchhhHHHHHHHHHhcCCCEEEE
Confidence 1245677777777777665
No 82
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=39.89 E-value=47 Score=26.39 Aligned_cols=59 Identities=7% Similarity=-0.015 Sum_probs=31.2
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEE
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIF 199 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~ 199 (323)
..|+|++|=... .+++.+ ++++.+...++++++--....+....-+....+++.||.+.
T Consensus 101 ~~dvViIDEaQF-~~~~~V-~~l~~l~~~~~~Vi~~Gl~~DF~~~~F~~~~~Ll~~AD~Vt 159 (214)
T 2j9r_A 101 EMDVIAIDEVQF-FDGDIV-EVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVT 159 (214)
T ss_dssp SCCEEEECCGGG-SCTTHH-HHHHHHHHTTCEEEEEECSBCTTSCBCTTHHHHHHHCSEEE
T ss_pred CCCEEEEECccc-CCHHHH-HHHHHHhhCCCEEEEEecccccccCccccHHHHHHhcccEE
Confidence 479999986543 455555 66666555688866533211100001112345566666665
No 83
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=39.63 E-value=29 Score=24.07 Aligned_cols=30 Identities=20% Similarity=0.142 Sum_probs=25.9
Q ss_pred cCCCCcchHHHHHHHHHhhcC-CCHHHHHHH
Q 020650 271 VDTNGAGDAFVGGFLSQLVQE-KPIEECVRA 300 (323)
Q Consensus 271 ~d~tGAGDaf~ag~~~~l~~g-~~~~~a~~~ 300 (323)
.|-.|-||..-|-++|++++| .+.+||++.
T Consensus 64 ~DKh~kGd~aEA~iAyAWleG~is~eEavei 94 (133)
T 1ztd_A 64 VDKHAKGDYAEALIAKAWLMGLISEREAVEI 94 (133)
T ss_dssp GGTTCHHHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHHhccccHHHHHHH
Confidence 577899999999999999998 578888774
No 84
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=38.20 E-value=61 Score=26.12 Aligned_cols=51 Identities=18% Similarity=0.279 Sum_probs=39.3
Q ss_pred ccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEE
Q 020650 138 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIF 199 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~ 199 (323)
.++|.+.++|. .++..+.+.++++..|+..+|+++.+.++. .+.+.+|.++
T Consensus 35 ~GtDaI~vGgs-~gvt~~~~~~~v~~ik~~~~Piil~p~~~~----------~~~~gaD~il 85 (235)
T 3w01_A 35 SQTDAIMIGGT-DDVTEDNVIHLMSKIRRYPLPLVLEISNIE----------SVMPGFDFYF 85 (235)
T ss_dssp SSCSEEEECCS-SCCCHHHHHHHHHHHTTSCSCEEEECCCST----------TCCTTCSEEE
T ss_pred cCCCEEEECCc-CCcCHHHHHHHHHHhcCcCCCEEEecCCHH----------HhhcCCCEEE
Confidence 45899999884 456788899999999988888888877542 4566777666
No 85
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=36.09 E-value=1.4e+02 Score=26.19 Aligned_cols=38 Identities=8% Similarity=0.193 Sum_probs=24.2
Q ss_pred cccEEEEecccc-ccCHHHHHHHHHHHHh--CCCeEEEeCC
Q 020650 139 KAKYFYIAGFFL-TVSPDSIQLVAEHAAA--NNKVFMMNLS 176 (323)
Q Consensus 139 ~~~~v~i~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~d~~ 176 (323)
+.++|+++.... ......+.++.+.|++ +++.+++|-.
T Consensus 167 ~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a 207 (415)
T 2fq6_A 167 NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNT 207 (415)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECC
Confidence 357777764331 1111236788888888 9998888864
No 86
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=32.54 E-value=1.1e+02 Score=24.35 Aligned_cols=47 Identities=11% Similarity=-0.078 Sum_probs=27.1
Q ss_pred cCchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHcCceeEEe
Q 020650 42 AGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYY 92 (323)
Q Consensus 42 ~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~ 92 (323)
.||-|..++..|++ . |.+|.++..-. ....+.+.+.+++.|.+...+
T Consensus 13 s~gIG~~ia~~l~~-~--G~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 59 (246)
T 3osu_A 13 SRGIGRSIALQLAE-E--GYNVAVNYAGS-KEKAEAVVEEIKAKGVDSFAI 59 (246)
T ss_dssp SSHHHHHHHHHHHH-T--TCEEEEEESSC-HHHHHHHHHHHHHTTSCEEEE
T ss_pred CChHHHHHHHHHHH-C--CCEEEEEeCCC-HHHHHHHHHHHHhcCCcEEEE
Confidence 56777787777765 4 48886653221 123445566666666554443
No 87
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=32.52 E-value=1e+02 Score=24.97 Aligned_cols=45 Identities=13% Similarity=-0.006 Sum_probs=26.6
Q ss_pred cCchHHHHHHHHHHhcCCCCcEEEEeeeecC-chhHHHHHHHHHcCceeEEe
Q 020650 42 AGGATQNSIRVAQWMLQIPGATSYIGCIGKD-KFGEEMKKNSKLAGVNVHYY 92 (323)
Q Consensus 42 ~GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D-~~g~~i~~~l~~~gi~~~~~ 92 (323)
.||-|..++..|++ . |.+|.+++ .+ ...+.+.+.+++.|.+...+
T Consensus 13 s~GIG~aia~~la~-~--G~~V~~~~---r~~~~~~~~~~~l~~~~~~~~~~ 58 (264)
T 3tfo_A 13 SGGIGEGIARELGV-A--GAKILLGA---RRQARIEAIATEIRDAGGTALAQ 58 (264)
T ss_dssp TSHHHHHHHHHHHH-T--TCEEEEEE---SSHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccHHHHHHHHHHHH-C--CCEEEEEE---CCHHHHHHHHHHHHhcCCcEEEE
Confidence 46777777777765 3 48877654 33 23345566666666554443
No 88
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=31.16 E-value=40 Score=26.30 Aligned_cols=36 Identities=6% Similarity=-0.200 Sum_probs=20.4
Q ss_pred hhhccccEEEEecccc-------ccCHHHHHHHHHHHHhCCCe
Q 020650 135 ALVEKAKYFYIAGFFL-------TVSPDSIQLVAEHAAANNKV 170 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~-------~~~~~~~~~~~~~~~~~~~~ 170 (323)
+.+++.|+|+.+.-.. ..+......+++.+++.++.
T Consensus 63 ~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 105 (227)
T 3dhn_A 63 EVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVN 105 (227)
T ss_dssp HHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCS
T ss_pred HHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCC
Confidence 4556677766543111 01124567788888888764
No 89
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=28.93 E-value=2e+02 Score=23.58 Aligned_cols=61 Identities=11% Similarity=-0.013 Sum_probs=38.3
Q ss_pred ccccEEEEecccccc-CHHHHHHHHHHHHhC-CCeEEEeCCchhHHHHHHHHHHhhcCCCcEEE-eCH
Q 020650 138 EKAKYFYIAGFFLTV-SPDSIQLVAEHAAAN-NKVFMMNLSAPFICEFFKDALEKVLPYMDYIF-GNE 202 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~-~n~ 202 (323)
.++|++-+++..... ..+.+..+++..++. ++++++|...+.. .+.--+.++.++++- +|.
T Consensus 46 ~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v----~~aal~a~~Ga~iINdvs~ 109 (271)
T 2yci_X 46 KGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDA----IEAGLKVHRGHAMINSTSA 109 (271)
T ss_dssp TTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEECSCHHH----HHHHHHHCCSCCEEEEECS
T ss_pred CCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeCCCHHH----HHHHHHhCCCCCEEEECCC
Confidence 568999998754222 134566777766654 8899999876553 222222345788887 664
No 90
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=28.85 E-value=2.4e+02 Score=22.99 Aligned_cols=60 Identities=12% Similarity=-0.002 Sum_probs=36.3
Q ss_pred ccccEEEEeccccccC-HHHHHHHHHHHHhC-CCeEEEeCCchhHHHHHHHHHHhhcCCCcEEE-eC
Q 020650 138 EKAKYFYIAGFFLTVS-PDSIQLVAEHAAAN-NKVFMMNLSAPFICEFFKDALEKVLPYMDYIF-GN 201 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~-~n 201 (323)
.++|++-+++-...++ .+.+..++...+.. ++++++|...+.. ....+ +.++.++++- +|
T Consensus 37 ~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v---~~aAl-~a~~Ga~iINdvs 99 (262)
T 1f6y_A 37 GGARALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKA---IEAGL-KKCKNRAMINSTN 99 (262)
T ss_dssp HTCSEEEEBCC----CHHHHHHHHHHHHHTTCCSEEEEECSCHHH---HHHHH-HHCSSCEEEEEEC
T ss_pred CCCcEEEECCCCCCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHH---HHHHH-hhCCCCCEEEECC
Confidence 5689999987433333 35666777766655 7889999876552 11212 2234788887 77
No 91
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=27.36 E-value=1.3e+02 Score=26.50 Aligned_cols=37 Identities=5% Similarity=0.178 Sum_probs=24.1
Q ss_pred cccEEEEeccc-cccCHHHHHHHHHHHHhCCCeEEEeC
Q 020650 139 KAKYFYIAGFF-LTVSPDSIQLVAEHAAANNKVFMMNL 175 (323)
Q Consensus 139 ~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~ 175 (323)
+.++|+++... +......+.++.+.|+++++.+++|-
T Consensus 167 ~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~ 204 (430)
T 3ri6_A 167 TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDT 204 (430)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEEC
T ss_pred CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEEC
Confidence 46788876432 11111236678888889999888885
No 92
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=26.92 E-value=1.5e+02 Score=24.08 Aligned_cols=45 Identities=16% Similarity=-0.082 Sum_probs=23.5
Q ss_pred CchHHHHHHHHHHhcCCCCcEEEEeeeecCchhHHHHHHHHHcCceeEEe
Q 020650 43 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYY 92 (323)
Q Consensus 43 GG~~~n~a~~l~~l~g~g~~v~~~~~vG~D~~g~~i~~~l~~~gi~~~~~ 92 (323)
||-|..++..|++ .|.+|.+++. +....+...+.+++.|.+...+
T Consensus 34 ~GIG~aia~~la~---~G~~V~~~~r--~~~~~~~~~~~l~~~~~~~~~~ 78 (279)
T 3sju_A 34 SGIGLAVARTLAA---RGIAVYGCAR--DAKNVSAAVDGLRAAGHDVDGS 78 (279)
T ss_dssp SHHHHHHHHHHHH---TTCEEEEEES--CHHHHHHHHHHHHTTTCCEEEE
T ss_pred CHHHHHHHHHHHH---CCCEEEEEeC--CHHHHHHHHHHHHhcCCcEEEE
Confidence 4455566666554 4588766543 1122344555666555554443
No 93
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=26.50 E-value=1.5e+02 Score=25.77 Aligned_cols=38 Identities=16% Similarity=0.037 Sum_probs=25.3
Q ss_pred cccEEEEeccc-cccCHHHHHHHHHHHHhCCCeEEEeCC
Q 020650 139 KAKYFYIAGFF-LTVSPDSIQLVAEHAAANNKVFMMNLS 176 (323)
Q Consensus 139 ~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~ 176 (323)
+.++|+++... +......+.++.+.|+++++.+++|-.
T Consensus 166 ~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~ 204 (414)
T 3ndn_A 166 PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNV 204 (414)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECC
Confidence 46788876533 111113467888888999999888864
No 94
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=26.24 E-value=1e+02 Score=25.68 Aligned_cols=50 Identities=12% Similarity=0.021 Sum_probs=39.0
Q ss_pred ccccEEEEeccccccC--HHHHHHHHHHHHh-CCCeEEE-eC---CchhHHHHHHHHHHhhcCCCcEEE
Q 020650 138 EKAKYFYIAGFFLTVS--PDSIQLVAEHAAA-NNKVFMM-NL---SAPFICEFFKDALEKVLPYMDYIF 199 (323)
Q Consensus 138 ~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~-d~---~~~~~~~~~~~~~~~~l~~~dvl~ 199 (323)
...|.++++ ..++. .+.+.++++.+|+ ..+++++ .+ ++.. .+.+.+|.++
T Consensus 65 sGtDai~VG--S~~vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g~~~----------~i~~~aDa~l 121 (286)
T 3vk5_A 65 LGFAAVLLA--STDYESFESHMEPYVAAVKAATPLPVVLHFPPRPGAGF----------PVVRGADALL 121 (286)
T ss_dssp TTCSCEEEE--CSCCSSHHHHHHHHHHHHHHHCSSCEEEECCCBTTTBS----------CCCTTCSEEE
T ss_pred cCCCEEEEc--cCCCCcchHHHHHHHHHHHHhCCCCEEEECCCCCCCcc----------ccccCCCEEE
Confidence 358999997 45677 7889999999998 7899999 77 5433 5677888877
No 95
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=25.45 E-value=1.6e+02 Score=24.23 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=39.8
Q ss_pred hhhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEE-eCCchhHHHHHHHHHHhhcCCCcEEE-eC
Q 020650 134 WALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMM-NLSAPFICEFFKDALEKVLPYMDYIF-GN 201 (323)
Q Consensus 134 ~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~l~~~dvl~-~n 201 (323)
.+.+.++|+++-. .+++.....++.+.++|+++++ ..+ |.+...+.++++.+...+++ +|
T Consensus 68 ~~ll~~~DVVIDf-----T~p~a~~~~~~~al~~G~~vVigTTG---~s~~~~~~L~~aa~~~~vv~a~N 129 (272)
T 4f3y_A 68 ERVCAEADYLIDF-----TLPEGTLVHLDAALRHDVKLVIGTTG---FSEPQKAQLRAAGEKIALVFSAN 129 (272)
T ss_dssp HHHHHHCSEEEEC-----SCHHHHHHHHHHHHHHTCEEEECCCC---CCHHHHHHHHHHTTTSEEEECSC
T ss_pred HHHhcCCCEEEEc-----CCHHHHHHHHHHHHHcCCCEEEECCC---CCHHHHHHHHHHhccCCEEEECC
Confidence 3456678887643 2577778888888899988665 332 33334455777777777777 55
No 96
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=25.42 E-value=75 Score=25.55 Aligned_cols=47 Identities=9% Similarity=-0.070 Sum_probs=32.4
Q ss_pred ccceEEEeCCce---eeeEeecChhHHhhHHHHhhcCCceeecCchHHHHHHHHHHhcCCCCcEEEEee
Q 020650 3 QEGILLGMGNPL---LDISSVVDDDFLNKYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGC 68 (323)
Q Consensus 3 ~~~~i~viG~~~---iD~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~g~g~~v~~~~~ 68 (323)
+.++|+|.|..+ ||-+.++ ....-|+.|+-.|.++++ .| .+|.+++.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~I----------------tN~SSG~mG~aiA~~~~~-~G--a~V~lv~~ 51 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSI----------------TNHSTGHLGKIITETLLS-AG--YEVCLITT 51 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEE----------------EECCCCHHHHHHHHHHHH-TT--CEEEEEEC
T ss_pred CCCEEEEeCCCcccccCceeec----------------cCCCCCHHHHHHHHHHHH-CC--CEEEEEeC
Confidence 346788888865 4433333 235678899999988886 55 99999864
No 97
>2gta_A Hypothetical protein YPJD; pyrophosphatase, NESG, structural genomics, PSI, protein structure initiative; 2.90A {Bacillus subtilis} SCOP: a.204.1.2
Probab=24.80 E-value=73 Score=22.43 Aligned_cols=28 Identities=14% Similarity=-0.022 Sum_probs=24.7
Q ss_pred cchHHHHHHHHHhhcCCCHHHHHHHHhH
Q 020650 276 AGDAFVGGFLSQLVQEKPIEECVRAGCY 303 (323)
Q Consensus 276 AGDaf~ag~~~~l~~g~~~~~a~~~A~~ 303 (323)
-||.+...+..+-..|.++++|+..++.
T Consensus 67 LGDvLf~lv~lA~~l~idle~al~~~~~ 94 (119)
T 2gta_A 67 IGDVLFVLVCLANSLDISLEEAHDRVMH 94 (119)
T ss_dssp HHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 3999999999999999999999997764
No 98
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=24.53 E-value=2.1e+02 Score=23.29 Aligned_cols=65 Identities=12% Similarity=-0.037 Sum_probs=46.6
Q ss_pred hhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEEeCHHHHHHH
Q 020650 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTF 208 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~e~~~l 208 (323)
....++|.|.+-.. .++++.+.++.+.+++.|..+.++..+.. .++..+ -.++++=+|..++.++
T Consensus 122 Ar~~GADaILLI~a--~L~~~~l~~l~~~A~~lGl~~LvEVh~~~-------El~rAl~~~a~iIGINNRnL~tf 187 (258)
T 4a29_A 122 AYNLGADTVLLIVK--ILTERELESLLEYARSYGMEPLILINDEN-------DLDIALRIGARFIGIMSRDFETG 187 (258)
T ss_dssp HHHHTCSEEEEEGG--GSCHHHHHHHHHHHHHTTCCCEEEESSHH-------HHHHHHHTTCSEEEECSBCTTTC
T ss_pred HHHcCCCeeehHHh--hcCHHHHHHHHHHHHHHhHHHHHhcchHH-------HHHHHhcCCCcEEEEeCCCcccc
Confidence 34567888876432 35678899999999999999888887532 344433 4789988888776543
No 99
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=24.11 E-value=90 Score=26.02 Aligned_cols=25 Identities=8% Similarity=-0.187 Sum_probs=16.7
Q ss_pred cCchHHHHHHHHHHhcCCCCcEEEEeee
Q 020650 42 AGGATQNSIRVAQWMLQIPGATSYIGCI 69 (323)
Q Consensus 42 ~GG~~~n~a~~l~~l~g~g~~v~~~~~v 69 (323)
.||-|.+++..|.+ . |.+|..+..-
T Consensus 14 tG~iG~~l~~~L~~-~--G~~V~~~~r~ 38 (341)
T 3enk_A 14 AGYIGSHTAVELLA-H--GYDVVIADNL 38 (341)
T ss_dssp TSHHHHHHHHHHHH-T--TCEEEEECCC
T ss_pred CcHHHHHHHHHHHH-C--CCcEEEEecC
Confidence 56777787777665 3 4888776543
No 100
>3cra_A Protein MAZG; tandem-repeat domain, hydrolase; 2.10A {Escherichia coli} PDB: 3crc_A*
Probab=23.73 E-value=69 Score=26.35 Aligned_cols=28 Identities=11% Similarity=-0.020 Sum_probs=25.3
Q ss_pred cchHHHHHHHHHhhcCCCHHHHHHHHhH
Q 020650 276 AGDAFVGGFLSQLVQEKPIEECVRAGCY 303 (323)
Q Consensus 276 AGDaf~ag~~~~l~~g~~~~~a~~~A~~ 303 (323)
-||.+.+.+..+...|.++++|++.++.
T Consensus 196 lGDlLFalVnlAR~~gIDpE~ALr~an~ 223 (265)
T 3cra_A 196 MGDLLFATVNLARHLGTKAEIALQKANE 223 (265)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4999999999999999999999998875
No 101
>1vmg_A Hypothetical protein SSO3215; 13816655, MAZG nucleotide pyrophosphohydrolase, structural G JCSG, protein structure initiative, PSI; HET: MSE; 1.46A {Sulfolobus solfataricus} SCOP: a.204.1.2
Probab=23.69 E-value=70 Score=21.61 Aligned_cols=26 Identities=15% Similarity=0.101 Sum_probs=23.1
Q ss_pred cchHHHHHHHHHhhcCCCHHHHHHHH
Q 020650 276 AGDAFVGGFLSQLVQEKPIEECVRAG 301 (323)
Q Consensus 276 AGDaf~ag~~~~l~~g~~~~~a~~~A 301 (323)
-||.+...+..+...|.++++|++.+
T Consensus 67 LgDvLf~lv~lA~~lgiD~e~al~~k 92 (95)
T 1vmg_A 67 LADVIAWTVSIANLEGIDIEEALKKK 92 (95)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 39999999999999999999999865
No 102
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=23.68 E-value=1.7e+02 Score=19.53 Aligned_cols=49 Identities=12% Similarity=0.161 Sum_probs=30.1
Q ss_pred cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEE--eCHHH
Q 020650 152 VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIF--GNETE 204 (323)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~--~~dvl~--~n~~e 204 (323)
.+.+.+.++-+..+++|.++----++.. .++.++.+.. ++.++. +...|
T Consensus 10 tdeetlrkfkdiikkngfkvrtvrspqe----lkdsieelvkkynativvvvvddke 62 (134)
T 2l69_A 10 TDEETLRKFKDIIKKNGFKVRTVRSPQE----LKDSIEELVKKYNATIVVVVVDDKE 62 (134)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECSHHH----HHHHHHHHTTCCCCEEEEEECSSHH
T ss_pred CCHHHHHHHHHHHHhcCceEEEecCHHH----HHHHHHHHHHHhCCeEEEEEEccHH
Confidence 4678899998899999988754434333 3444555554 344444 44444
No 103
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=23.59 E-value=1.8e+02 Score=23.69 Aligned_cols=24 Identities=13% Similarity=-0.031 Sum_probs=13.9
Q ss_pred cCchHHHHHHHHHHhcCCCCcEEEEee
Q 020650 42 AGGATQNSIRVAQWMLQIPGATSYIGC 68 (323)
Q Consensus 42 ~GG~~~n~a~~l~~l~g~g~~v~~~~~ 68 (323)
.|+-|..++..|.+ . |.+|..++.
T Consensus 13 tG~iG~~l~~~L~~-~--g~~V~~l~R 36 (308)
T 1qyc_A 13 TGYIGRHVAKASLD-L--GHPTFLLVR 36 (308)
T ss_dssp TSTTHHHHHHHHHH-T--TCCEEEECC
T ss_pred CcHHHHHHHHHHHh-C--CCCEEEEEC
Confidence 45556666666654 3 477766543
No 104
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=23.52 E-value=1.8e+02 Score=22.55 Aligned_cols=81 Identities=9% Similarity=0.021 Sum_probs=44.5
Q ss_pred cEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEEe-----CHHHHHHHHhhcCCC
Q 020650 141 KYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFG-----NETEARTFSKVQGWE 215 (323)
Q Consensus 141 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~-----n~~e~~~l~~~~~~~ 215 (323)
..|.+.|-.+.+.++.+.++++.+++.+..+.+........ ..+.++.+++..|.+.+ +.+..+.+.+ .+
T Consensus 71 ~~i~~~GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~~--~~~~~~~l~~~~~~v~isld~~~~~~~~~~~~---~~ 145 (245)
T 3c8f_A 71 GGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRR--YDPVIDELLEVTDLVMLDLKQMNDEIHQNLVG---VS 145 (245)
T ss_dssp CEEEEEESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCCC--CCHHHHHHHHTCSEEEEECCCSSHHHHHHHHS---SC
T ss_pred CeEEEECCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcCc--CHHHHHHHHHhCCEEEEeCCCCCHHHhhhccC---CC
Confidence 56777764455667778899999998887765544332100 01223344444565553 4555555544 22
Q ss_pred CCCHHHHHHHH
Q 020650 216 TDDVEEIALKL 226 (323)
Q Consensus 216 ~~~~~~~~~~l 226 (323)
.+...+.++.+
T Consensus 146 ~~~~~~~i~~l 156 (245)
T 3c8f_A 146 NHRTLEFAKYL 156 (245)
T ss_dssp SHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 23445555555
No 105
>2q5z_A MAZG, hypothetical protein; NTP-ppase, hydrolase; 2.30A {Vibrio SP}
Probab=23.46 E-value=82 Score=21.96 Aligned_cols=28 Identities=7% Similarity=-0.165 Sum_probs=24.6
Q ss_pred cchHHHHHHHHHhhcCCCHHHHHHHHhH
Q 020650 276 AGDAFVGGFLSQLVQEKPIEECVRAGCY 303 (323)
Q Consensus 276 AGDaf~ag~~~~l~~g~~~~~a~~~A~~ 303 (323)
-||.+...+..+...|.++++|+...+.
T Consensus 79 LgDvL~~l~~LA~~lgiDle~al~~k~~ 106 (114)
T 2q5z_A 79 LYDVLYYVCALANIHGVNLEKTRELKEV 106 (114)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 4999999998888999999999997654
No 106
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=23.13 E-value=3.4e+02 Score=22.82 Aligned_cols=41 Identities=20% Similarity=0.226 Sum_probs=27.2
Q ss_pred hhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCC
Q 020650 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLS 176 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 176 (323)
..++....|++.- .+..+.+...++.+.+++.++.+.+.+.
T Consensus 85 ~al~~gk~vl~EK-P~~~~~~~~~~l~~~a~~~~~~~~v~~~ 125 (354)
T 3db2_A 85 QCARSGKHIYVEK-PISVSLDHAQRIDQVIKETGVKFLCGHS 125 (354)
T ss_dssp HHHHTTCEEEEES-SSCSSHHHHHHHHHHHHHHCCCEEEECG
T ss_pred HHHHcCCEEEEcc-CCCCCHHHHHHHHHHHHHcCCeEEEeec
Confidence 4455566666653 1245667788888888888887666553
No 107
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=22.81 E-value=1.8e+02 Score=23.67 Aligned_cols=24 Identities=13% Similarity=-0.041 Sum_probs=14.1
Q ss_pred cCchHHHHHHHHHHhcCCCCcEEEEee
Q 020650 42 AGGATQNSIRVAQWMLQIPGATSYIGC 68 (323)
Q Consensus 42 ~GG~~~n~a~~l~~l~g~g~~v~~~~~ 68 (323)
.|+-|.+++..|.+ . |.+|..++.
T Consensus 13 tG~iG~~l~~~L~~-~--g~~V~~~~R 36 (313)
T 1qyd_A 13 TGYIGKRIVNASIS-L--GHPTYVLFR 36 (313)
T ss_dssp TSTTHHHHHHHHHH-T--TCCEEEECC
T ss_pred CcHHHHHHHHHHHh-C--CCcEEEEEC
Confidence 45556666666654 3 477766543
No 108
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=21.07 E-value=1.2e+02 Score=25.33 Aligned_cols=26 Identities=12% Similarity=-0.102 Sum_probs=15.7
Q ss_pred cCchHHHHHHHHHHhcCCCCcEEEEee
Q 020650 42 AGGATQNSIRVAQWMLQIPGATSYIGC 68 (323)
Q Consensus 42 ~GG~~~n~a~~l~~l~g~g~~v~~~~~ 68 (323)
.|+-|.+++..|.+ .+.|.+|..+..
T Consensus 13 tG~iG~~l~~~L~~-~~~g~~V~~~~r 38 (348)
T 1oc2_A 13 AGFIGSNFVHYVYN-NHPDVHVTVLDK 38 (348)
T ss_dssp TSHHHHHHHHHHHH-HCTTCEEEEEEC
T ss_pred ccHHHHHHHHHHHH-hCCCCEEEEEeC
Confidence 46666777766665 322477766654
No 109
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=20.39 E-value=3.4e+02 Score=21.84 Aligned_cols=58 Identities=12% Similarity=0.092 Sum_probs=34.8
Q ss_pred cccEEEEeccccccCHHHHHHHHHHHHhCCCe---EEEeCCchhHHHHHHHHHHhhcCCCcEEEeC
Q 020650 139 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKV---FMMNLSAPFICEFFKDALEKVLPYMDYIFGN 201 (323)
Q Consensus 139 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n 201 (323)
++++++.+ .+.+.+.++.+.+++.|.. +..|+..+.-.+...+...+-+...|+++-|
T Consensus 31 Ga~Vv~~~-----~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNN 91 (254)
T 4fn4_A 31 DSIVVAVE-----LLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNN 91 (254)
T ss_dssp TCEEEEEE-----SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCEEEEEE-----CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45555443 4566777777777776643 5567776554444444444455678888754
No 110
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=20.17 E-value=2.8e+02 Score=23.01 Aligned_cols=60 Identities=13% Similarity=0.178 Sum_probs=38.2
Q ss_pred hhhccccEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEE-eC
Q 020650 135 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIF-GN 201 (323)
Q Consensus 135 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dvl~-~n 201 (323)
+.+.++|+++-- .+++.....++.|.++|+++++-... |.+...+.++.+.+...++. +|
T Consensus 84 ~ll~~aDVvIDF-----T~p~a~~~~~~~~l~~Gv~vViGTTG--~~~e~~~~L~~aa~~~~~~~a~N 144 (288)
T 3ijp_A 84 SAFSNTEGILDF-----SQPQASVLYANYAAQKSLIHIIGTTG--FSKTEEAQIADFAKYTTIVKSGN 144 (288)
T ss_dssp HHTTSCSEEEEC-----SCHHHHHHHHHHHHHHTCEEEECCCC--CCHHHHHHHHHHHTTSEEEECSC
T ss_pred HHhcCCCEEEEc-----CCHHHHHHHHHHHHHcCCCEEEECCC--CCHHHHHHHHHHhCcCCEEEECC
Confidence 446678877532 15677777888888889886653222 33334455777777777776 66
Done!