Your job contains 1 sequence.
>020653
MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTA
IWGSRQKAKLALKKTSLTPKLDGRTPVIPKHDGRTPVTPKQDGRTQMTPKHDDNTIALST
APQNDEVVDAKPLAISSGTMQASGSKEPVARLDKLILEAISNLKEPNGSDRASIASYIED
QYWAPANLRKLLATKLKFLSANGTLIKAKHKYRITPNTPVSVPKRSPKLLLEGRQKGSPK
AQKKEINILTKSLVDADLSRMRGMTAQEAAAAAAQAIAEAEVAIAEAEEAAREAERAEAE
AEAAQVFAKAAIKALKCRALHTW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020653
(323 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2158611 - symbol:TRB2 "AT5G67580" species:3702... 315 5.4e-59 2
TAIR|locus:2031095 - symbol:TRB1 "telomere repeat binding... 316 1.6e-55 2
TAIR|locus:2097325 - symbol:TRB3 "telomere repeat binding... 296 2.6e-51 2
TAIR|locus:2007878 - symbol:AT1G17520 species:3702 "Arabi... 238 4.4e-20 1
TAIR|locus:2030275 - symbol:AT1G72740 species:3702 "Arabi... 232 1.9e-19 1
ZFIN|ZDB-GENE-090612-2 - symbol:terf1 "telomeric repeat b... 138 7.4e-07 1
TAIR|locus:2020193 - symbol:AT1G54260 species:3702 "Arabi... 122 7.5e-06 1
TAIR|locus:2064332 - symbol:AT2G30620 species:3702 "Arabi... 126 8.8e-06 1
TAIR|locus:2033118 - symbol:AT1G06760 species:3702 "Arabi... 126 8.9e-06 1
TAIR|locus:2060984 - symbol:HIS1-3 "histone H1-3" species... 116 1.0e-05 1
TAIR|locus:2036174 - symbol:TRFL5 "TRF-like 5" species:37... 123 4.2e-05 1
RGD|1311574 - symbol:Terf1 "telomeric repeat binding fact... 123 4.8e-05 1
UNIPROTKB|G3X7V3 - symbol:TERF1 "Uncharacterized protein"... 122 6.6e-05 1
UNIPROTKB|F1NSI5 - symbol:TERF2 "Telomeric repeat-binding... 122 0.00013 1
UNIPROTKB|Q9PU53 - symbol:TERF2 "Telomeric repeat-binding... 122 0.00013 1
UNIPROTKB|F1NCJ0 - symbol:TERF1 "Uncharacterized protein"... 117 0.00016 1
UNIPROTKB|F1NEJ5 - symbol:TERF1 "Uncharacterized protein"... 117 0.00017 1
UNIPROTKB|Q6T804 - symbol:AID1 "ANTHER INDEHISCENCE1" spe... 118 0.00018 1
UNIPROTKB|F1NCI9 - symbol:TERF1 "Uncharacterized protein"... 117 0.00018 1
TAIR|locus:2006862 - symbol:HMGA "high mobility group A" ... 110 0.00029 1
UNIPROTKB|Q8CH10 - symbol:Terf1 "Telomere double-strand D... 115 0.00039 1
MGI|MGI:109634 - symbol:Terf1 "telomeric repeat binding f... 115 0.00039 1
TAIR|locus:2030255 - symbol:TRFL6 "TRF-like 6" species:37... 117 0.00042 1
>TAIR|locus:2158611 [details] [associations]
symbol:TRB2 "AT5G67580" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009651 "response to salt
stress" evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0042162 "telomeric DNA binding" evidence=IDA]
InterPro:IPR001005 InterPro:IPR005818 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0005730
GO:GO:0009723 GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
PROSITE:PS51294 KO:K09422 GO:GO:0006334 GO:GO:0000786 GO:GO:0043047
EMBL:AB013390 GO:GO:0003691 HSSP:P54274 HOGENOM:HOG000238013
ProtClustDB:CLSN2684376 EMBL:U83836 EMBL:U83837 EMBL:AY519545
EMBL:AY039883 EMBL:AY077668 IPI:IPI00536586 RefSeq:NP_201559.1
RefSeq:NP_851286.1 UniGene:At.28806 UniGene:At.7636
ProteinModelPortal:Q9FJW5 SMR:Q9FJW5 IntAct:Q9FJW5 STRING:Q9FJW5
EnsemblPlants:AT5G67580.1 EnsemblPlants:AT5G67580.2 GeneID:836894
KEGG:ath:AT5G67580 TAIR:At5g67580 InParanoid:Q9FJW5 OMA:DERAKPT
PhylomeDB:Q9FJW5 Genevestigator:Q9FJW5 Uniprot:Q9FJW5
Length = 299
Score = 315 (115.9 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 70/167 (41%), Positives = 99/167 (59%)
Query: 104 RTQMTPKHDDNTIALSTAPQNDEVVDAKPLA---ISSGTMQASGSKEPVARLDKLILEAI 160
RT K DDN AL+ ++ AKP + G+ + SK + LDK+I EAI
Sbjct: 74 RTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPRTCASKRSITSLDKIIFEAI 133
Query: 161 SNLKEPNGSDRASIASYIEDQYWAPANLRKLLATKLKFLSANGTLIKAKHKYRITPN-TP 219
+NL+E GSDR SI YIE+ + P N+++ +A +LK LS+NGTL+K KHKYR + N P
Sbjct: 134 TNLRELRGSDRTSIFLYIEENFKTPPNMKRHVAVRLKHLSSNGTLVKIKHKYRFSSNFIP 193
Query: 220 VSVPKRSPKLLLEGRQKGSP-KAQKKEINILTKSLVDADLSRMRGMT 265
+++P+L LEG K P K ++ N LTK VD +L ++GMT
Sbjct: 194 AGARQKAPQLFLEGNNKKDPTKPEENGANSLTKFRVDGELYMIKGMT 240
Score = 308 (113.5 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 58/66 (87%), Positives = 61/66 (92%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTA 60
MGAPKQKWT EEEAALKAGV KHGTGKWRTILSD EFS IL SRSNVDLKDKWRNI+VTA
Sbjct: 1 MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60
Query: 61 IWGSRQ 66
+WGSR+
Sbjct: 61 LWGSRK 66
>TAIR|locus:2031095 [details] [associations]
symbol:TRB1 "telomere repeat binding factor 1"
species:3702 "Arabidopsis thaliana" [GO:0000786 "nucleosome"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IDA]
[GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR005818 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
SMART:SM00717 EMBL:CP002684 GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0005730 GO:GO:0009723
GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930 PROSITE:PS51294
KO:K09422 GO:GO:0006334 GO:GO:0000786 EMBL:AC015445 GO:GO:0003691
EMBL:U83623 EMBL:U83624 EMBL:AY519539 EMBL:AY062736 EMBL:BT009677
EMBL:AY087994 IPI:IPI00542861 RefSeq:NP_564559.1 RefSeq:NP_849789.1
RefSeq:NP_973998.1 UniGene:At.27250 HSSP:P54274
ProteinModelPortal:Q8VWK4 SMR:Q8VWK4 IntAct:Q8VWK4
MINT:MINT-1212432 STRING:Q8VWK4 PRIDE:Q8VWK4
EnsemblPlants:AT1G49950.1 EnsemblPlants:AT1G49950.2
EnsemblPlants:AT1G49950.3 GeneID:841418 KEGG:ath:AT1G49950
TAIR:At1g49950 HOGENOM:HOG000238013 InParanoid:Q8VWK4 OMA:MANGWGS
PhylomeDB:Q8VWK4 ProtClustDB:CLSN2684376 Genevestigator:Q8VWK4
Uniprot:Q8VWK4
Length = 300
Score = 316 (116.3 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 71/167 (42%), Positives = 107/167 (64%)
Query: 104 RTQMTPKHDDNTIALSTAPQNDEV-VDAKP-LAISSGTMQASGSKEPVARLDKLILEAIS 161
RT PK ++N++AL+ + Q+DE VDA L +SS + P RLD LI+EAI+
Sbjct: 75 RTFSLPKQEENSLALTNSLQSDEENVDATSGLQVSSNPPP----RRPNVRLDSLIMEAIA 130
Query: 162 NLKEPNGSDRASIASYIEDQYWAPANLRKLLATKLKFLSANGTLIKAKHKYRITPNTPVS 221
LKEP G ++ +I +YIEDQY AP + ++LL+TKLK+L++ G L+K K KYRI +TP+S
Sbjct: 131 TLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKLVKVKRKYRIPNSTPLS 190
Query: 222 VPKRSPKLLLEGRQKGS----PKAQKKEINILTKSLVDADLSRMRGM 264
+R + G+Q+ S PK E+N T+S +D +++RM+ M
Sbjct: 191 SHRRKGLGVFGGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARMKSM 237
Score = 274 (101.5 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 51/67 (76%), Positives = 58/67 (86%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTA 60
MGAPKQKWT EEE+ALK+GV KHG GKWRTIL DPEFS +L+ RSNVDLKDKWRN++V A
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 I-WGSRQ 66
WGSR+
Sbjct: 61 NGWGSRE 67
>TAIR|locus:2097325 [details] [associations]
symbol:TRB3 "telomere repeat binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0000786 "nucleosome"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] [GO:0003691 "double-stranded
telomeric DNA binding" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009651 "response to salt
stress" evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR005818 InterPro:IPR009057
Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
SMART:SM00717 GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009733 GO:GO:0009753 EMBL:AL132965 GO:GO:0005730
GO:GO:0009723 GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
PROSITE:PS51294 KO:K09422 GO:GO:0006334 GO:GO:0000786 GO:GO:0043047
GO:GO:0003691 HSSP:P54274 HOGENOM:HOG000238013
ProtClustDB:CLSN2684376 EMBL:U83838 EMBL:U83839 EMBL:AY519542
EMBL:AY058887 EMBL:AY065069 EMBL:AY079043 IPI:IPI00527572
PIR:T46051 RefSeq:NP_190554.1 UniGene:At.26646
ProteinModelPortal:Q9M2X3 SMR:Q9M2X3 IntAct:Q9M2X3
MINT:MINT-1212448 STRING:Q9M2X3 EnsemblPlants:AT3G49850.1
GeneID:824147 KEGG:ath:AT3G49850 TAIR:At3g49850 eggNOG:NOG264278
InParanoid:Q9M2X3 OMA:PPAGSCE PhylomeDB:Q9M2X3
Genevestigator:Q9M2X3 Uniprot:Q9M2X3
Length = 295
Score = 296 (109.3 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 55/66 (83%), Positives = 59/66 (89%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTA 60
MGAPK KWT EEE ALKAGV KHGTGKWRTILSDP +S IL SRSNVDLKDKWRNI+VTA
Sbjct: 1 MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA 60
Query: 61 IWGSRQ 66
+WGSR+
Sbjct: 61 LWGSRK 66
Score = 254 (94.5 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 60/164 (36%), Positives = 96/164 (58%)
Query: 104 RTQMT-PKHDDNTIALSTAPQNDEVVDAKPLAISSGTMQASGSKEPVARLDKLILEAISN 162
RT ++ + DDN A++ + V + + S + P +DK+ILEAI++
Sbjct: 74 RTPLSGSRQDDNATAITIVSLANGDVGGQQIDAPSPPAGSCEPPRPSTSVDKIILEAITS 133
Query: 163 LKEPNGSDRASIASYIEDQYWAPANLRKLLATKLKFLSANGTLIKAKHKYRITPNTPVSV 222
LK P G D SI YIE+ + ++++L+ ++LK+L+ GTL+K KHKYRI+ N
Sbjct: 134 LKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLTNVGTLVKKKHKYRISQNYMAEG 193
Query: 223 P-KRSPKLLLEGRQKGSPKAQKKEINILTKSLVDADLSRMRGMT 265
+RSP+LLLEG ++ +PK ++ + LTKS V ++ M GMT
Sbjct: 194 EGQRSPQLLLEGNKENTPKPEENGVKNLTKSQVGGEVMIM-GMT 236
Score = 39 (18.8 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 16/78 (20%), Positives = 36/78 (46%)
Query: 102 DGRTQMTPKHDDNTIALSTAPQNDEVVDAKPLAISSGTMQASGSK-EPVARLDKLILEAI 160
+G + TPK ++N + T Q V + + + +A+ + VA + + EA
Sbjct: 204 EGNKENTPKPEENGVKNLTKSQ----VGGEVMIMGMTEKEAAAAAARAVAEAEFAMAEAE 259
Query: 161 SNLKEPNGSDRASIASYI 178
+E + ++ + A++I
Sbjct: 260 EAAREADKAEAEAEAAHI 277
>TAIR|locus:2007878 [details] [associations]
symbol:AT1G17520 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009751 "response to salicylic
acid stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] InterPro:IPR001005 InterPro:IPR005818
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504
SMART:SM00526 SMART:SM00717 EMBL:CP002684 GO:GO:0005634
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC022492 InterPro:IPR017930
PROSITE:PS51294 KO:K09422 GO:GO:0006334 GO:GO:0000786
HOGENOM:HOG000238013 EMBL:AY519538 EMBL:AK118533 EMBL:BT005290
IPI:IPI00518720 IPI:IPI00524616 RefSeq:NP_173195.2 UniGene:At.41830
ProteinModelPortal:F4I7L1 SMR:F4I7L1 EnsemblPlants:AT1G17520.1
GeneID:838326 KEGG:ath:AT1G17520 TAIR:At1g17520 PhylomeDB:F4I7L1
Uniprot:F4I7L1
Length = 296
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 61/150 (40%), Positives = 75/150 (50%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVT- 59
MG K KWTAEEE AL AGVRKHG GKW+ IL DPE + L SRSN+DLKDKWRN++V
Sbjct: 1 MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP 60
Query: 60 AIWGSRQXXXXXXXXXXXXXXXDGRTPVI--PKHDGRT-PV-TPKQDGRTQMTPKHDDNT 115
I GS+ I P H G + PV T + G + ++ N
Sbjct: 61 GIQGSKDKIRTPKIKAAAFHLAAAAAAAIVTPTHSGHSSPVATLPRSGSSDLSIDDSFNI 120
Query: 116 IALSTAPQNDEVVDAKPLAISSGTMQASGS 145
+A P+N D S A+GS
Sbjct: 121 VA---DPKNAPRYDGMIFEALSNLTDANGS 147
Score = 150 (57.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/164 (28%), Positives = 88/164 (53%)
Query: 107 MTPKHDDNTIALSTAPQNDEVVDAKPLAIS-SGTMQASGSKEPVARLDKLILEAISNLKE 165
+TP H ++ ++T P++ + L+I S + A P R D +I EA+SNL +
Sbjct: 90 VTPTHSGHSSPVATLPRSG----SSDLSIDDSFNIVADPKNAP--RYDGMIFEALSNLTD 143
Query: 166 PNGSDRASIASYIEDQYWAPANLRKLLATKLKFLSANGTLIKAKHK------YRITPNTP 219
NGSD ++I ++IE + P N R++L+++L+ L+A G L K H Y++ N
Sbjct: 144 ANGSDVSAIFNFIEQRQEVPPNFRRMLSSRLRRLAAQGKLEKVSHLKSTQNFYKMNDN-- 201
Query: 220 VSVPKRSPKLLLEGRQKGSPKAQKKEINI----LTKSLVDADLS 259
S+ +R+P + R K S +++ N +++ +V+A ++
Sbjct: 202 -SLVQRTPHV---ARPKESNTKSRQQTNSQGPSISQQIVEASIT 241
>TAIR|locus:2030275 [details] [associations]
symbol:AT1G72740 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR001005 InterPro:IPR005818
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00538 PROSITE:PS51504
SMART:SM00526 SMART:SM00717 EMBL:CP002684 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC010926 InterPro:IPR017930 PROSITE:PS51294 GO:GO:0006334
GO:GO:0000786 HOGENOM:HOG000238013 EMBL:AF372925 EMBL:AY124849
IPI:IPI00543298 IPI:IPI00846964 PIR:C96752 RefSeq:NP_177418.2
UniGene:At.19127 ProteinModelPortal:F4IEY4 SMR:F4IEY4 PRIDE:F4IEY4
EnsemblPlants:AT1G72740.1 GeneID:843606 KEGG:ath:AT1G72740
TAIR:At1g72740 OMA:IEPRHEV Uniprot:F4IEY4
Length = 287
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 59/145 (40%), Positives = 76/145 (52%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTA 60
MG K KWTAEEE AL AG+RKHG GKW+ IL DPEF+ L RSN+DLKDKWRN++V
Sbjct: 1 MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60
Query: 61 IWGSRQXXXXXXXXXXXXXXXDGRTPVIPKHDGRT-----PVTPKQDGRTQMTPK--HDD 113
G++ +G TP +D T P P GR + + D+
Sbjct: 61 --GTQSLTNKARPAKVKE---EGDTPAADANDAVTIPRPIPTIPPPPGRRTLPSELIPDE 115
Query: 114 NTIALSTAPQNDEVVDAKPLAISSG 138
NT AP+ D V+ A++ G
Sbjct: 116 NT---KNAPRYDGVIFEALSALADG 137
Score = 127 (49.8 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 46/143 (32%), Positives = 71/143 (49%)
Query: 96 PVTPKQDGRTQMTPKHDDNTIALSTAPQNDEVVDAKP--LAISSGTMQASGSKEPVARLD 153
P K++G T P D N T P+ + P + S + +K R D
Sbjct: 71 PAKVKEEGDT---PAADANDAV--TIPRPIPTIPPPPGRRTLPSELIPDENTKN-APRYD 124
Query: 154 KLILEAISNLKEPNGSDRASIASYIEDQYWAPANLRKLLATKLKFLSANGTLIKA----- 208
+I EA+S L + NGSD +SI +IE ++ P N R++L+T+L+ L+A L K
Sbjct: 125 GVIFEALSALADGNGSDVSSIYHFIEPRHEVPPNFRRILSTRLRRLAAQSKLEKVSTFKS 184
Query: 209 -KHKYRIT-PN-TPVSVPKRSPK 228
++ Y+I P+ T + VPK PK
Sbjct: 185 IQNFYKIPDPSGTKIGVPK--PK 205
>ZFIN|ZDB-GENE-090612-2 [details] [associations]
symbol:terf1 "telomeric repeat binding factor
(NIMA-interacting) 1" species:7955 "Danio rerio" [GO:0042162
"telomeric DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
InterPro:IPR013867 InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558
PIRSF:PIRSF038016 ProDom:PD014243 SMART:SM00717
ZFIN:ZDB-GENE-090612-2 GO:GO:0005634 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 GO:GO:0000781 GO:GO:0000723 GO:GO:0042162
Gene3D:1.25.40.210 SUPFAM:SSF63600 GeneTree:ENSGT00530000063796
EMBL:CR759896 EMBL:CR318587 IPI:IPI00482159
Ensembl:ENSDART00000106008 ArrayExpress:F1R8I5 Bgee:F1R8I5
Uniprot:F1R8I5
Length = 386
Score = 138 (53.6 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWR 54
++KWT E+ LKAGV+KHG GKW IL+D +F +R+ V+LKD+WR
Sbjct: 332 RKKWTDVEDKKLKAGVKKHGVGKWSKILNDFDFD----NRTTVNLKDRWR 377
>TAIR|locus:2020193 [details] [associations]
symbol:AT1G54260 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA;ISS]
InterPro:IPR005818 Pfam:PF00538 PROSITE:PS51504 SMART:SM00526
EMBL:CP002684 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006334 GO:GO:0000786 IPI:IPI00541984
RefSeq:NP_175828.1 UniGene:At.50951 ProteinModelPortal:F4HV94
EnsemblPlants:AT1G54260.1 GeneID:841867 KEGG:ath:AT1G54260
OMA:EESHTML Uniprot:F4HV94
Length = 197
Score = 122 (48.0 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 150 ARLDKLILEAISNLKEPNGSDRASIASYIEDQYWAPANLRKLLATKLKFLSANGTLIKAK 209
AR D ++ EA+S + + NGS+ I +IE Q+ P N +KLL+ L L + L K +
Sbjct: 5 ARYDAMVFEAVSTINDENGSNLKEILRFIEGQHEVPQNFKKLLSYSLGILVSQDKLKKVR 64
Query: 210 HKYRIT 215
++Y+I+
Sbjct: 65 NRYKIS 70
>TAIR|locus:2064332 [details] [associations]
symbol:AT2G30620 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006334 "nucleosome assembly"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR005818 InterPro:IPR005819
Pfam:PF00538 PRINTS:PR00624 PROSITE:PS51504 SMART:SM00526
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334
GO:GO:0000786 EMBL:U93215 KO:K11275 eggNOG:NOG126832
HOGENOM:HOG000240494 EMBL:X62459 EMBL:AF360211 EMBL:AY040059
EMBL:AY085789 IPI:IPI00532307 PIR:S19699 RefSeq:NP_180620.1
UniGene:At.20406 ProteinModelPortal:P26569 STRING:P26569
PaxDb:P26569 PRIDE:P26569 EnsemblPlants:AT2G30620.1 GeneID:817612
KEGG:ath:AT2G30620 TAIR:At2g30620 InParanoid:P26569 OMA:KVAVTKK
ProtClustDB:CLSN2912930 Genevestigator:P26569 GermOnline:AT2G30620
Uniprot:P26569
Length = 273
Score = 126 (49.4 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 131 KPLAISSGTMQASGSKEPVARLDKLILEAISNLKEPNGSDRASIASYIEDQYWA-PANLR 189
KP+ ++ T + + S P +++I +AI LKE GS + +I +IE+++ + P R
Sbjct: 46 KPVKAAAPTKKKTTSSHPT--YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFR 103
Query: 190 KLLATKLKFLSANGTLIKAKHKYRITPNTPVSVPKRSPKLLLEGRQKGSPKAQ 242
KLL LK L A+ L+K K ++I + PK + + + PK +
Sbjct: 104 KLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGK 156
>TAIR|locus:2033118 [details] [associations]
symbol:AT1G06760 species:3702 "Arabidopsis thaliana"
[GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA;ISS]
InterPro:IPR005818 InterPro:IPR005819 Pfam:PF00538 PRINTS:PR00624
PROSITE:PS51504 SMART:SM00526 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334 GO:GO:0000786
EMBL:AC011001 KO:K11275 eggNOG:NOG126832 EMBL:X62458 EMBL:X62456
EMBL:AF428314 EMBL:AY050452 EMBL:AY097352 EMBL:AY086374
IPI:IPI00547445 PIR:S19698 RefSeq:NP_172161.1 UniGene:At.23323
UniGene:At.48159 ProteinModelPortal:P26568 SMR:P26568 STRING:P26568
PaxDb:P26568 PRIDE:P26568 EnsemblPlants:AT1G06760.1 GeneID:837187
KEGG:ath:AT1G06760 TAIR:At1g06760 HOGENOM:HOG000240494
InParanoid:P26568 OMA:AATIEGN ProtClustDB:CLSN2914236
Genevestigator:P26568 GermOnline:AT1G06760 Uniprot:P26568
Length = 274
Score = 126 (49.4 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 52/157 (33%), Positives = 74/157 (47%)
Query: 112 DDNTIALSTAPQNDEVVDAKPLAISSGTMQASGSKE-------PVARL-------DKLIL 157
+ NT A AP D V+ KP A T KE P R +++I
Sbjct: 13 EGNTAA--DAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIK 70
Query: 158 EAISNLKEPNGSDRASIASYIEDQYWA-PANLRKLLATKLKFLSANGTLIKAKHKYRITP 216
+AI LKE GS + +I +IE++ P RKLL LK L A+G L+K K +++ P
Sbjct: 71 DAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKL-P 129
Query: 217 NTPVSVPKRSPKLLLEGRQKGSPKAQKKEINI-LTKS 252
+ S SPK E K +P A+KK + +TK+
Sbjct: 130 SA--SAKASSPKAAAE---KSAP-AKKKPATVAVTKA 160
>TAIR|locus:2060984 [details] [associations]
symbol:HIS1-3 "histone H1-3" species:3702 "Arabidopsis
thaliana" [GO:0000786 "nucleosome" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0031492 "nucleosomal DNA binding" evidence=ISS]
InterPro:IPR005818 InterPro:IPR005819 Pfam:PF00538 PRINTS:PR00624
PROSITE:PS51504 SMART:SM00526 GO:GO:0005634 EMBL:CP002685
GO:GO:0009414 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334
GO:GO:0000786 GO:GO:0031492 EMBL:AC006201 KO:K11275 EMBL:U72241
EMBL:U73781 EMBL:AY045797 EMBL:AY079414 EMBL:AY084603
IPI:IPI00539258 PIR:F84559 RefSeq:NP_179396.1 UniGene:At.24439
ProteinModelPortal:P94109 SMR:P94109 STRING:P94109
EnsemblPlants:AT2G18050.1 GeneID:816317 KEGG:ath:AT2G18050
TAIR:At2g18050 eggNOG:NOG258576 HOGENOM:HOG000241672
InParanoid:P94109 OMA:ARQPKSI PhylomeDB:P94109
ProtClustDB:CLSN2683930 ArrayExpress:P94109 Genevestigator:P94109
Uniprot:P94109
Length = 167
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/101 (32%), Positives = 57/101 (56%)
Query: 154 KLILEAISNLKEPNGSDRASIASYIEDQYWA--PANLRKLLATKLKFLSANGTLIKAKHK 211
++I EA+ LKE NGS +IA IE+++ + P + RK L+ +LK A G L+K +
Sbjct: 29 QMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRAS 88
Query: 212 YRITPNTPVSVPKRSPKLLLEGRQKGSPKAQKKEINILTKS 252
Y+++ T + + ++ K + K + K + KEI T+S
Sbjct: 89 YKLSDTTKM-ITRQQDK-----KNKKNMKQEDKEITKRTRS 123
>TAIR|locus:2036174 [details] [associations]
symbol:TRFL5 "TRF-like 5" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 EMBL:AC034256 HSSP:P54274 eggNOG:NOG323962
UniGene:At.16909 UniGene:At.48193 EMBL:BT003085 EMBL:AY519536
EMBL:AK227390 IPI:IPI00520047 PIR:D86291 RefSeq:NP_173024.1
ProteinModelPortal:Q9LMR2 SMR:Q9LMR2 IntAct:Q9LMR2
EnsemblPlants:AT1G15720.1 GeneID:838141 KEGG:ath:AT1G15720
TAIR:At1g15720 HOGENOM:HOG000140269 InParanoid:Q9LMR2 OMA:IRYNAIS
PhylomeDB:Q9LMR2 ProtClustDB:CLSN2679506 ArrayExpress:Q9LMR2
Genevestigator:Q9LMR2 Uniprot:Q9LMR2
Length = 390
Score = 123 (48.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 4 PKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
P + WT+EE AAL+ GV+++G W+ I + + + RS VDLKDKWRN+
Sbjct: 337 PMKFWTSEEVAALREGVKEYGKS-WKDIKNS--YPVVFADRSEVDLKDKWRNL 386
>RGD|1311574 [details] [associations]
symbol:Terf1 "telomeric repeat binding factor (NIMA-interacting)
1" species:10116 "Rattus norvegicus" [GO:0000086 "G2/M transition
of mitotic cell cycle" evidence=ISO] [GO:0000781 "chromosome,
telomeric region" evidence=ISO] [GO:0000783 "nuclear telomere cap
complex" evidence=IEA;ISO] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0001309 "age-dependent telomere
shortening" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003691 "double-stranded telomeric DNA binding"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005819 "spindle" evidence=IEA;ISO] [GO:0006917 "induction of
apoptosis" evidence=IEA;ISO] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007004 "telomere maintenance via telomerase"
evidence=ISO] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008156 "negative regulation of DNA
replication" evidence=ISO] [GO:0008301 "DNA binding, bending"
evidence=IEA;ISO] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA;ISO]
[GO:0010521 "telomerase inhibitor activity" evidence=IEA;ISO]
[GO:0010834 "telomere maintenance via telomere shortening"
evidence=ISO] [GO:0031116 "positive regulation of microtubule
polymerization" evidence=IEA;ISO] [GO:0032211 "negative regulation
of telomere maintenance via telomerase" evidence=IEA;ISO]
[GO:0042162 "telomeric DNA binding" evidence=ISO] [GO:0042493
"response to drug" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0045840 "positive
regulation of mitosis" evidence=IEA;ISO] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA;ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA;ISO] [GO:0051260
"protein homooligomerization" evidence=IEA;ISO] [GO:0051974
"negative regulation of telomerase activity" evidence=ISO]
InterPro:IPR001005 InterPro:IPR009057 InterPro:IPR013867
InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558 PIRSF:PIRSF038016
ProDom:PD014243 SMART:SM00717 RGD:1311574 GO:GO:0005634
GO:GO:0000086 GO:GO:0006917 GO:GO:0007094 GO:GO:0005819
GO:GO:0042493 GO:GO:0045931 GO:GO:0051260 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008301 GO:GO:0000783
GO:GO:0032211 GO:GO:0045840 GO:GO:0008656 GO:GO:0031116
InterPro:IPR017930 PROSITE:PS51294 EMBL:CH473984 GO:GO:0010521
GO:GO:0003691 HOVERGEN:HBG054097 Gene3D:1.25.40.210 SUPFAM:SSF63600
CTD:7013 eggNOG:NOG72230 HOGENOM:HOG000132847 KO:K11110
GO:GO:0001309 GeneTree:ENSGT00530000063796 EMBL:BC089888
IPI:IPI00569734 RefSeq:NP_001012482.1 UniGene:Rn.33853 SMR:Q5EB98
STRING:Q5EB98 Ensembl:ENSRNOT00000049741 GeneID:297758
KEGG:rno:297758 UCSC:RGD:1311574 InParanoid:Q5EB98 OMA:NFKEAEV
OrthoDB:EOG45HRXH NextBio:642619 Genevestigator:Q5EB98
Uniprot:Q5EB98
Length = 421
Score = 123 (48.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
KQ W EE+ +LK GVRK+G G W ILS +F+ +R++V LKD+WR +
Sbjct: 367 KQTWLWEEDRSLKCGVRKYGEGNWAKILSHYKFN----NRTSVMLKDRWRTM 414
>UNIPROTKB|G3X7V3 [details] [associations]
symbol:TERF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IEA] [GO:0045840 "positive regulation of mitosis"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032211 "negative regulation of telomere
maintenance via telomerase" evidence=IEA] [GO:0031116 "positive
regulation of microtubule polymerization" evidence=IEA] [GO:0010521
"telomerase inhibitor activity" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008301 "DNA binding, bending"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IEA] [GO:0001309 "age-dependent telomere
shortening" evidence=IEA] [GO:0000783 "nuclear telomere cap
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
InterPro:IPR013867 InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558
PIRSF:PIRSF038016 ProDom:PD014243 SMART:SM00717 GO:GO:0000086
GO:GO:0006917 GO:GO:0007094 GO:GO:0005819 GO:GO:0045931
GO:GO:0051260 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0008301 GO:GO:0000783 GO:GO:0032211 GO:GO:0045840
GO:GO:0008656 GO:GO:0031116 InterPro:IPR017930 PROSITE:PS51294
GO:GO:0010521 GO:GO:0003691 Gene3D:1.25.40.210 SUPFAM:SSF63600
OMA:AYQLRTV GO:GO:0001309 GeneTree:ENSGT00530000063796
EMBL:DAAA02038833 UniGene:Bt.23286 Ensembl:ENSBTAT00000046824
Uniprot:G3X7V3
Length = 436
Score = 122 (48.0 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
KQ W EE+ L++GVRK+G G W ILS EF+ +R++V LKD+WR +
Sbjct: 377 KQAWLWEEDKNLRSGVRKYGEGNWSKILSHYEFN----NRTSVMLKDRWRTM 424
>UNIPROTKB|F1NSI5 [details] [associations]
symbol:TERF2 "Telomeric repeat-binding factor 2"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000783 "nuclear telomere cap complex"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0010834 "telomere maintenance
via telomere shortening" evidence=IEA] [GO:0030870 "Mre11 complex"
evidence=IEA] [GO:0031627 "telomeric loop formation" evidence=IEA]
[GO:0031848 "protection from non-homologous end joining at
telomere" evidence=IEA] [GO:0032205 "negative regulation of
telomere maintenance" evidence=IEA] [GO:0032206 "positive
regulation of telomere maintenance" evidence=IEA] [GO:0042162
"telomeric DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0070198 "protein
localization to chromosome, telomeric region" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 InterPro:IPR013867
Pfam:PF00249 Pfam:PF08558 ProDom:PD014243 SMART:SM00717
GO:GO:0005794 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000783 GO:GO:0031848 GO:GO:0070198 GO:GO:0001673
InterPro:IPR017930 PROSITE:PS51294 GO:GO:0042162 GO:GO:0032206
GO:GO:0031627 GO:GO:0032205 GO:GO:0030870 GO:GO:0010834
Gene3D:1.25.40.210 SUPFAM:SSF63600 GeneTree:ENSGT00530000063796
EMBL:AADN02054167 IPI:IPI01017077 RefSeq:NP_001258821.1
Ensembl:ENSGALT00000000932 GeneID:395598 OMA:GENLDCT
NextBio:20815671 Uniprot:F1NSI5
Length = 718
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 2 GAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTAI 61
G+ KQKWT +E +K GVRK+G G+W+TI F +R++V +KD++R + I
Sbjct: 662 GSKKQKWTVQESEWIKDGVRKYGEGRWKTISEKYPFQ----NRTSVQIKDRYRTMKKLGI 717
>UNIPROTKB|Q9PU53 [details] [associations]
symbol:TERF2 "Telomeric repeat-binding factor 2"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=ISS;TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0042162 "telomeric DNA binding" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 InterPro:IPR013867
Pfam:PF00249 Pfam:PF08558 ProDom:PD014243 SMART:SM00717
GO:GO:0005654 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0007049 InterPro:IPR017930 PROSITE:PS51294 GO:GO:0000781
GO:GO:0000723 GO:GO:0042162 Reactome:REACT_115612
Gene3D:1.25.40.210 SUPFAM:SSF63600 EMBL:AJ133783 EMBL:CR406218
IPI:IPI00602730 UniGene:Gga.2569 ProteinModelPortal:Q9PU53
SMR:Q9PU53 STRING:Q9PU53 PRIDE:Q9PU53 eggNOG:NOG44337
HOGENOM:HOG000202714 InParanoid:Q9PU53 OrthoDB:EOG4TB4CV
Uniprot:Q9PU53
Length = 718
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 2 GAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTAI 61
G+ KQKWT +E +K GVRK+G G+W+TI F +R++V +KD++R + I
Sbjct: 662 GSKKQKWTVQESEWIKDGVRKYGEGRWKTISEKYPFQ----NRTSVQIKDRYRTMKKLGI 717
>UNIPROTKB|F1NCJ0 [details] [associations]
symbol:TERF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 InterPro:IPR013867
InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558 PIRSF:PIRSF038016
ProDom:PD014243 SMART:SM00717 GO:GO:0005634 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 GO:GO:0000781 GO:GO:0000723 GO:GO:0042162
Gene3D:1.25.40.210 SUPFAM:SSF63600 GeneTree:ENSGT00530000063796
EMBL:AADN02024642 IPI:IPI00590993 Ensembl:ENSGALT00000025206
ArrayExpress:F1NCJ0 Uniprot:F1NCJ0
Length = 345
Score = 117 (46.2 bits), Expect = 0.00016, P = 0.00016
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
+Q WT EE+ LK+GVR+ G G W IL +F+ +R++V LKD+WR +
Sbjct: 294 RQPWTYEEDRKLKSGVREFGVGNWTKILIHGDFN----NRTSVMLKDRWRTL 341
>UNIPROTKB|F1NEJ5 [details] [associations]
symbol:TERF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0000783
"nuclear telomere cap complex" evidence=IEA] [GO:0001309
"age-dependent telomere shortening" evidence=IEA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0010521 "telomerase inhibitor
activity" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0032211 "negative
regulation of telomere maintenance via telomerase" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0045840 "positive regulation of mitosis" evidence=IEA]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
InterPro:IPR013867 InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558
PIRSF:PIRSF038016 ProDom:PD014243 SMART:SM00717 GO:GO:0000086
GO:GO:0006917 GO:GO:0007094 GO:GO:0005819 GO:GO:0045931
GO:GO:0051260 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0008301 GO:GO:0000783 GO:GO:0032211 GO:GO:0045840
GO:GO:0008656 GO:GO:0031116 InterPro:IPR017930 PROSITE:PS51294
GO:GO:0010521 GO:GO:0003691 Gene3D:1.25.40.210 SUPFAM:SSF63600
GO:GO:0001309 GeneTree:ENSGT00530000063796 EMBL:AADN02024642
IPI:IPI00570913 Ensembl:ENSGALT00000030883 ArrayExpress:F1NEJ5
Uniprot:F1NEJ5
Length = 354
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
+Q WT EE+ LK+GVR+ G G W IL +F+ +R++V LKD+WR +
Sbjct: 303 RQPWTYEEDRKLKSGVREFGVGNWTKILIHGDFN----NRTSVMLKDRWRTL 350
>UNIPROTKB|Q6T804 [details] [associations]
symbol:AID1 "ANTHER INDEHISCENCE1" species:39947 "Oryza
sativa Japonica Group" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0010152 "pollen
maturation" evidence=IMP] [GO:0043067 "regulation of programmed
cell death" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0003677 EMBL:AP008212
GO:GO:0003700 GO:GO:0003682 GO:GO:0010152 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043067 GO:GO:0009901 InterPro:IPR017930
PROSITE:PS51294 KO:K11111 HSSP:P54274 EMBL:AY429017 EMBL:AP003019
EMBL:AP007257 RefSeq:NP_001056978.1 UniGene:Os.16389
EnsemblPlants:LOC_Os06g08290.1 GeneID:4340310
KEGG:dosa:Os06t0181300-01 KEGG:osa:4340310 HOGENOM:HOG000241717
OMA:TARTSQW ProtClustDB:CLSN2696008 Uniprot:Q6T804
Length = 426
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 6 QKWTAEEEAALKAGVRKHGTGKWRTILSD-PEFSAILHSRSNVDLKDKWRNI 56
+KW A EE L+ GV ++G G W+ IL++ P+ + R +DLKDKWRN+
Sbjct: 376 RKWCALEEETLRKGVEQYGNGNWKDILTNNPD---VFIGRKAMDLKDKWRNM 424
>UNIPROTKB|F1NCI9 [details] [associations]
symbol:TERF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0000783
"nuclear telomere cap complex" evidence=IEA] [GO:0001309
"age-dependent telomere shortening" evidence=IEA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0010521 "telomerase inhibitor
activity" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0032211 "negative
regulation of telomere maintenance via telomerase" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0045840 "positive regulation of mitosis" evidence=IEA]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
InterPro:IPR013867 InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558
PIRSF:PIRSF038016 ProDom:PD014243 SMART:SM00717 GO:GO:0000086
GO:GO:0006917 GO:GO:0007094 GO:GO:0005819 GO:GO:0045931
GO:GO:0051260 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0008301 GO:GO:0000783 GO:GO:0032211 GO:GO:0045840
GO:GO:0008656 GO:GO:0031116 InterPro:IPR017930 PROSITE:PS51294
GO:GO:0010521 GO:GO:0003691 Gene3D:1.25.40.210 SUPFAM:SSF63600
OMA:AYQLRTV GO:GO:0001309 GeneTree:ENSGT00530000063796
EMBL:AADN02024642 IPI:IPI00822261 Ensembl:ENSGALT00000025207
ArrayExpress:F1NCI9 Uniprot:F1NCI9
Length = 366
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
+Q WT EE+ LK+GVR+ G G W IL +F+ +R++V LKD+WR +
Sbjct: 315 RQPWTYEEDRKLKSGVREFGVGNWTKILIHGDFN----NRTSVMLKDRWRTL 362
>TAIR|locus:2006862 [details] [associations]
symbol:HMGA "high mobility group A" species:3702
"Arabidopsis thaliana" [GO:0000785 "chromatin" evidence=IEA]
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] InterPro:IPR000116 InterPro:IPR005818
InterPro:IPR017956 Pfam:PF00538 Pfam:PF02178 PRINTS:PR00930
PROSITE:PS51504 SMART:SM00384 SMART:SM00526 EMBL:CP002684
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006334
GO:GO:0000786 EMBL:AC006917 EMBL:AF041253 EMBL:BT004806
EMBL:AK317240 EMBL:X99116 IPI:IPI00519692 RefSeq:NP_172943.1
UniGene:At.5361 ProteinModelPortal:Q43386 SMR:Q43386 IntAct:Q43386
STRING:Q43386 PRIDE:Q43386 EnsemblPlants:AT1G14900.1 GeneID:838055
KEGG:ath:AT1G14900 TAIR:At1g14900 InParanoid:Q43386 OMA:MVKNNYM
ProtClustDB:CLSN2912857 Genevestigator:Q43386 Uniprot:Q43386
Length = 204
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 33/111 (29%), Positives = 56/111 (50%)
Query: 154 KLILEAISNLKEPNGSDRASIASYIED-QYWAPANLRKLLATKLKFLSANGTLIKAKHKY 212
++I+EAI +L + NG ++ +IA +IE Q P + LL+ L + G LI K+ Y
Sbjct: 28 QMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHMTLLSYHLNQMKKTGQLIMVKNNY 87
Query: 213 RITPNTPVSVPKRSPKLLLEGRQKGSPKAQKKEINILTKSLVDADLSRMRG 263
+ P+ P + PKR +QK ++ ++ ++V D R RG
Sbjct: 88 -MKPD-PDAPPKRGRGR--PPKQKTQAESDAAAAAVVAATVVSTDPPRSRG 134
>UNIPROTKB|Q8CH10 [details] [associations]
symbol:Terf1 "Telomere double-strand DNA-binding protein
TRF1" species:10096 "Mus spretus" [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
InterPro:IPR013867 InterPro:IPR017357 Pfam:PF00249 Pfam:PF08558
PIRSF:PIRSF038016 ProDom:PD014243 SMART:SM00717 GO:GO:0005634
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 GO:GO:0000781 GO:GO:0000723 GO:GO:0042162
HOVERGEN:HBG054097 Gene3D:1.25.40.210 SUPFAM:SSF63600 HSSP:P54274
EMBL:AF518766 ProteinModelPortal:Q8CH10 SMR:Q8CH10 Uniprot:Q8CH10
Length = 417
Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00039
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
+Q W EE+ LK GV+K+G G W ILS +F+ +R++V LKD+WR +
Sbjct: 363 RQTWLWEEDRILKCGVKKYGEGNWAKILSHYKFN----NRTSVMLKDRWRTM 410
>MGI|MGI:109634 [details] [associations]
symbol:Terf1 "telomeric repeat binding factor 1"
species:10090 "Mus musculus" [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=ISO] [GO:0000783 "nuclear telomere cap complex"
evidence=ISO;IDA] [GO:0000784 "nuclear chromosome, telomeric
region" evidence=IDA] [GO:0001309 "age-dependent telomere
shortening" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=ISO]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007004 "telomere
maintenance via telomerase" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO] [GO:0008156 "negative
regulation of DNA replication" evidence=ISO] [GO:0008301 "DNA
binding, bending" evidence=ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=ISO] [GO:0010521 "telomerase inhibitor activity"
evidence=ISO] [GO:0010834 "telomere maintenance via telomere
shortening" evidence=ISO] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=ISO] [GO:0032211 "negative
regulation of telomere maintenance via telomerase" evidence=ISO]
[GO:0042162 "telomeric DNA binding" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0045840
"positive regulation of mitosis" evidence=ISO] [GO:0045931
"positive regulation of mitotic cell cycle" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051974 "negative regulation of
telomerase activity" evidence=ISO] InterPro:IPR001005
InterPro:IPR009057 InterPro:IPR013867 InterPro:IPR017357
Pfam:PF00249 Pfam:PF08558 PIRSF:PIRSF038016 ProDom:PD014243
SMART:SM00717 MGI:MGI:109634 GO:GO:0005737 GO:GO:0000086
GO:GO:0005654 GO:GO:0051301 GO:GO:0007067 GO:GO:0006917
GO:GO:0007094 GO:GO:0005819 GO:GO:0042493 GO:GO:0045931
GO:GO:0051260 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0008301 GO:GO:0000783 GO:GO:0032211 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0045840
GO:GO:0008656 GO:GO:0031116 InterPro:IPR017930 PROSITE:PS51294
GO:GO:0010521 GO:GO:0003691 HOVERGEN:HBG054097 Gene3D:1.25.40.210
SUPFAM:SSF63600 CTD:7013 eggNOG:NOG72230 HOGENOM:HOG000132847
KO:K11110 OMA:AYQLRTV ChiTaRS:TERF1 GO:GO:0001309 EMBL:U65586
EMBL:BC034866 EMBL:U70994 EMBL:AK021235 IPI:IPI00108266
RefSeq:NP_033378.1 UniGene:Mm.4306 ProteinModelPortal:P70371
SMR:P70371 MINT:MINT-3379583 STRING:P70371 PhosphoSite:P70371
PRIDE:P70371 Ensembl:ENSMUST00000027057 GeneID:21749 KEGG:mmu:21749
UCSC:uc007ajf.1 GeneTree:ENSGT00530000063796 InParanoid:P70371
NextBio:301039 Bgee:P70371 CleanEx:MM_TERF1 Genevestigator:P70371
GermOnline:ENSMUSG00000025925 Uniprot:P70371
Length = 421
Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00039
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
+Q W EE+ LK GV+K+G G W ILS +F+ +R++V LKD+WR +
Sbjct: 367 RQTWLWEEDRILKCGVKKYGEGNWAKILSHYKFN----NRTSVMLKDRWRTM 414
>TAIR|locus:2030255 [details] [associations]
symbol:TRFL6 "TRF-like 6" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=RCA] [GO:0010048 "vernalization
response" evidence=RCA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002684
GO:GO:0046686 GO:GO:0003677 GO:GO:0009651 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 IPI:IPI00532857 RefSeq:NP_974133.1 UniGene:At.26165
ProteinModelPortal:F4IDF1 SMR:F4IDF1 PRIDE:F4IDF1
EnsemblPlants:AT1G72650.2 GeneID:843597 KEGG:ath:AT1G72650
OMA:AGKWSEI Uniprot:F4IDF1
Length = 630
Score = 117 (46.2 bits), Expect = 0.00042, P = 0.00042
Identities = 28/54 (51%), Positives = 34/54 (62%)
Query: 8 WTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHS-RSNVDLKDKWRNINVTA 60
WT E A L GV K+G GKW I FS+ HS R++VDLKDKWRN+ T+
Sbjct: 543 WTLSEIAKLVEGVSKYGAGKWSEIKKHL-FSS--HSYRTSVDLKDKWRNLLKTS 593
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 323 259 0.00088 114 3 11 23 0.39 34
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 607 (65 KB)
Total size of DFA: 188 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.41u 0.09s 22.50t Elapsed: 00:00:01
Total cpu time: 22.41u 0.09s 22.50t Elapsed: 00:00:01
Start: Fri May 10 02:21:52 2013 End: Fri May 10 02:21:53 2013