BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020657
(323 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 155/280 (55%), Gaps = 20/280 (7%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D EK+ LG GNGG V+KV H+ + + A K++H + P +R Q+ RE+++L +SP+I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHK 170
V +G F G+I+I ME+MD G+LD +L K G E L ++ ++KGL+YL HK
Sbjct: 67 VGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
I+HRD+KPSN+LVN+ ++K+ DFGVS + S+ NS+VGT +YMSPER
Sbjct: 126 IMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----G 177
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGD------PPSLPDGA 284
DIWS G +P P + D M D PP LP G
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGV 237
Query: 285 -SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSDC 323
S EF+ F+ CL K ++R QL+ H F+ +RSD
Sbjct: 238 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFI---KRSDA 274
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 187 bits (475), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 153/274 (55%), Gaps = 14/274 (5%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D EK+ LG GNGG V+KV H+ + + A K++H + P +R Q+ RE+++L +SP+I
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 85
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHK 170
V +G F G+I+I ME+MD G+LD +L K G E L ++ ++KGL+YL HK
Sbjct: 86 VGFYGAF-YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 144
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
I+HRD+KPSN+LVN+ ++K+ DFGVS + S+ NS+VGT +YMSPER
Sbjct: 145 IMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----G 196
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA-SPEFR 289
DIWS G +P L+ I PP LP G S EF+
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQ 256
Query: 290 SFIECCLQKEFSKRWTASQLLTHPFLCKNRRSDC 323
F+ CL K ++R QL+ H F+ +RSD
Sbjct: 257 DFVNKCLIKNPAERADLKQLMVHAFI---KRSDA 287
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 153/276 (55%), Gaps = 22/276 (7%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D EK+ LG GNGG V+KV H+ + + A K++H + P +R Q+ RE+++L +SP+I
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHK 170
V +G F G+I+I ME+MD G+LD +L K G E L ++ ++KGL+YL HK
Sbjct: 70 VGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 128
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
I+HRD+KPSN+LVN+ ++K+ DFGVS + + N +VGT +YMSPER
Sbjct: 129 IMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDEM--ANEFVGTRSYMSPERLQ-----G 180
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWAT--LMCAICFGDPPSLPDGA-SPE 287
DIWS G +P RP A L+ I PP LP S E
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYP------RPPMAIFELLDYIVNEPPPKLPSAVFSLE 234
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSDC 323
F+ F+ CL K ++R QL+ H F+ +RSD
Sbjct: 235 FQDFVNKCLIKNPAERADLKQLMVHAFI---KRSDA 267
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 157/312 (50%), Gaps = 52/312 (16%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D EK+ LG GNGG V+KV H+ + + A K++H + P +R Q+ RE+++L +SP+I
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHK 170
V +G F G+I+I ME+MD G+LD +L K G E L ++ ++KGL+YL HK
Sbjct: 94 VGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 152
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
I+HRD+KPSN+LVN+ ++K+ DFGVS + S+ NS+VGT +YMSPER
Sbjct: 153 IMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----G 204
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQP------------------------------- 259
DIWS G +P P
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264
Query: 260 -----GQRPDWAT--LMCAICFGDPPSLPDGA-SPEFRSFIECCLQKEFSKRWTASQLLT 311
RP A L+ I PP LP G S EF+ F+ CL K ++R QL+
Sbjct: 265 NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324
Query: 312 HPFLCKNRRSDC 323
H F+ +RSD
Sbjct: 325 HAFI---KRSDA 333
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 157/312 (50%), Gaps = 52/312 (16%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D EK+ LG GNGG V+KV H+ + + A K++H + P +R Q+ RE+++L +SP+I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHK 170
V +G F G+I+I ME+MD G+LD +L K G E L ++ ++KGL+YL HK
Sbjct: 67 VGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
I+HRD+KPSN+LVN+ ++K+ DFGVS + S+ NS+VGT +YMSPER
Sbjct: 126 IMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----G 177
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQP------------------------------- 259
DIWS G +P P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 260 -----GQRPDWAT--LMCAICFGDPPSLPDGA-SPEFRSFIECCLQKEFSKRWTASQLLT 311
RP A L+ I PP LP G S EF+ F+ CL K ++R QL+
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 312 HPFLCKNRRSDC 323
H F+ +RSD
Sbjct: 298 HAFI---KRSDA 306
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 157/312 (50%), Gaps = 52/312 (16%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D EK+ LG GNGG V+KV H+ + + A K++H + P +R Q+ RE+++L +SP+I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHK 170
V +G F G+I+I ME+MD G+LD +L K G E L ++ ++KGL+YL HK
Sbjct: 67 VGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
I+HRD+KPSN+LVN+ ++K+ DFGVS + S+ NS+VGT +YMSPER
Sbjct: 126 IMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----G 177
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQP------------------------------- 259
DIWS G +P P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 260 -----GQRPDWAT--LMCAICFGDPPSLPDGA-SPEFRSFIECCLQKEFSKRWTASQLLT 311
RP A L+ I PP LP G S EF+ F+ CL K ++R QL+
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 312 HPFLCKNRRSDC 323
H F+ +RSD
Sbjct: 298 HAFI---KRSDA 306
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 157/312 (50%), Gaps = 52/312 (16%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D EK+ LG GNGG V+KV H+ + + A K++H + P +R Q+ RE+++L +SP+I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHK 170
V +G F G+I+I ME+MD G+LD +L K G E L ++ ++KGL+YL HK
Sbjct: 67 VGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
I+HRD+KPSN+LVN+ ++K+ DFGVS + S+ NS+VGT +YMSPER
Sbjct: 126 IMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----G 177
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQP------------------------------- 259
DIWS G +P P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 260 -----GQRPDWAT--LMCAICFGDPPSLPDGA-SPEFRSFIECCLQKEFSKRWTASQLLT 311
RP A L+ I PP LP G S EF+ F+ CL K ++R QL+
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 312 HPFLCKNRRSDC 323
H F+ +RSD
Sbjct: 298 HAFI---KRSDA 306
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 157/312 (50%), Gaps = 52/312 (16%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D EK+ LG GNGG V+KV H+ + + A K++H + P +R Q+ RE+++L +SP+I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHK 170
V +G F G+I+I ME+MD G+LD +L K G E L ++ ++KGL+YL HK
Sbjct: 67 VGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
I+HRD+KPSN+LVN+ ++K+ DFGVS + S+ NS+VGT +YMSPER
Sbjct: 126 IMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----G 177
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQP------------------------------- 259
DIWS G +P P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 260 -----GQRPDWAT--LMCAICFGDPPSLPDGA-SPEFRSFIECCLQKEFSKRWTASQLLT 311
RP A L+ I PP LP G S EF+ F+ CL K ++R QL+
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
Query: 312 HPFLCKNRRSDC 323
H F+ +RSD
Sbjct: 298 HAFI---KRSDA 306
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 174 bits (440), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 156/312 (50%), Gaps = 52/312 (16%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D EK+ LG GNGG V+KV H+ + + A K++H + P +R Q+ RE+++L +SP+I
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHK 170
V +G F G+I+I ME+MD G+LD +L K G E L ++ ++KGL+YL HK
Sbjct: 129 VGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
I+HRD+KPSN+LVN+ ++K+ DFGVS + S+ NS+VGT +YMSPER
Sbjct: 188 IMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQ-----G 239
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQP------------------------------- 259
DIWS G +P P
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 299
Query: 260 -----GQRPDWAT--LMCAICFGDPPSLPDGA-SPEFRSFIECCLQKEFSKRWTASQLLT 311
RP A L+ I PP LP S EF+ F+ CL K ++R QL+
Sbjct: 300 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMV 359
Query: 312 HPFLCKNRRSDC 323
H F+ +RSD
Sbjct: 360 HAFI---KRSDA 368
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 154/312 (49%), Gaps = 53/312 (16%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D E++ LG GNGG V KVQHR + I A K++H + P +R Q+ RE+++L +SP+I
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 76
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL-HGHK 170
V +G F G+I+I ME+MD G+LD +L + E L ++ +L+GL+YL H+
Sbjct: 77 VGFYGAFYS-DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ 135
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
I+HRD+KPSN+LVN+ ++K+ DFGVS + S+ NS+VGT +YM+PER
Sbjct: 136 IMHRDVKPSNILVNSRG-EIKLCDFGVSGQLIDSM--ANSFVGTRSYMAPERLQ-----G 187
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQP------------------------------- 259
DIWS G +P P
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP 247
Query: 260 ---------GQRPDWAT--LMCAICFGDPPSLPDGA-SPEFRSFIECCLQKEFSKRWTAS 307
RP A L+ I PP LP+G +P+F+ F+ CL K ++R
Sbjct: 248 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLK 307
Query: 308 QLLTHPFLCKNR 319
L H F+ ++
Sbjct: 308 MLTNHTFIKRSE 319
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 140/263 (53%), Gaps = 17/263 (6%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L+ LG G+ G+VYK H+ T +I A+K V ++D +++ +E+ I+++ DSP +V+ +
Sbjct: 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD---LQEIIKEISIMQQCDSPHVVKYY 90
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
G + K + D+ I+MEY +G++ ++ +N T +E ++A I LKGL YLH + IHR
Sbjct: 91 GSYFK-NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHR 149
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
DIK N+L+N K+ADFGV+ + + N +GT +M+PE
Sbjct: 150 DIKAGNILLNTEG-HAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQ-----EIGYN 203
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSL--PDGASPEFRSFI 292
DIWS G P+ P A M I PP+ P+ S F F+
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYADI--HPMRAIFM--IPTNPPPTFRKPELWSDNFTDFV 259
Query: 293 ECCLQKEFSKRWTASQLLTHPFL 315
+ CL K +R TA+QLL HPF+
Sbjct: 260 KQCLVKSPEQRATATQLLQHPFV 282
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 141/268 (52%), Gaps = 16/268 (5%)
Query: 55 KLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQC 114
KL+ +G G+ G V+K T K+ A+K++ + + +E+ +L + DSP++ +
Sbjct: 11 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
+G + K + + I+MEY+ G+ LL + G E ++A I +ILKGL YLH K IHR
Sbjct: 71 YGSYLKDT-KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
DIK +N+L++ + +VK+ADFGV+ + + N++VGT +M+PE
Sbjct: 129 DIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-----VIKQSAYD 182
Query: 235 XXXDIWSXXXXXXXXXXGHFPF--LQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFI 292
DIWS G P L P + ++ I +PP+L S + F+
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPMK------VLFLIPKNNPPTLEGNYSKPLKEFV 236
Query: 293 ECCLQKEFSKRWTASQLLTHPFLCKNRR 320
E CL KE S R TA +LL H F+ +N +
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 141/268 (52%), Gaps = 16/268 (5%)
Query: 55 KLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQC 114
KL+ +G G+ G V+K T K+ A+K++ + + +E+ +L + DSP++ +
Sbjct: 31 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 90
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
+G + K + + I+MEY+ G+ LL + G E ++A I +ILKGL YLH K IHR
Sbjct: 91 YGSYLKDT-KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHR 148
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
DIK +N+L++ + +VK+ADFGV+ + + N++VGT +M+PE
Sbjct: 149 DIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-----KQSAYD 202
Query: 235 XXXDIWSXXXXXXXXXXGHFPF--LQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFI 292
DIWS G P L P + ++ I +PP+L S + F+
Sbjct: 203 SKADIWSLGITAIELARGEPPHSELHPMK------VLFLIPKNNPPTLEGNYSKPLKEFV 256
Query: 293 ECCLQKEFSKRWTASQLLTHPFLCKNRR 320
E CL KE S R TA +LL H F+ +N +
Sbjct: 257 EACLNKEPSFRPTAKELLKHKFILRNAK 284
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 139/268 (51%), Gaps = 16/268 (5%)
Query: 55 KLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQC 114
KL+ +G G+ G V+K T K+ A+K++ + + +E+ +L + DSP++ +
Sbjct: 26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 85
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
+G + K + + I+MEY+ G+ LL + G E ++A I +ILKGL YLH K IHR
Sbjct: 86 YGSYLKDT-KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
DIK +N+L++ + +VK+ADFGV+ + + N +VGT +M+PE
Sbjct: 144 DIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-----KQSAYD 197
Query: 235 XXXDIWSXXXXXXXXXXGHFPF--LQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFI 292
DIWS G P L P ++ I +PP+L S + F+
Sbjct: 198 SKADIWSLGITAIELARGEPPHSELHP------MKVLFLIPKNNPPTLEGNYSKPLKEFV 251
Query: 293 ECCLQKEFSKRWTASQLLTHPFLCKNRR 320
E CL KE S R TA +LL H F+ +N +
Sbjct: 252 EACLNKEPSFRPTAKELLKHKFILRNAK 279
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 16/268 (5%)
Query: 55 KLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQC 114
KL+ +G G+ G V+K T K+ A+K++ + + +E+ +L + DSP++ +
Sbjct: 11 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
+G + K + + I+MEY+ G+ LL + G E ++A I +ILKGL YLH K IHR
Sbjct: 71 YGSYLKDT-KLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
DIK +N+L++ + +VK+ADFGV+ + + N +VGT +M+PE
Sbjct: 129 DIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-----VIKQSAYD 182
Query: 235 XXXDIWSXXXXXXXXXXGHFPF--LQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFI 292
DIWS G P L P + ++ I +PP+L S + F+
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPMK------VLFLIPKNNPPTLEGNYSKPLKEFV 236
Query: 293 ECCLQKEFSKRWTASQLLTHPFLCKNRR 320
E CL KE S R TA +LL H F+ +N +
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFILRNAK 264
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 139/271 (51%), Gaps = 14/271 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEI-LRRTDSP 109
+DLE L +G G G V+K++ R T + A+K + + +++ ++++ L+ D P
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYL- 166
+IVQCFG F + D+ I ME M GT L K G E L + I+K L YL
Sbjct: 85 YIVQCFGTFITNT-DVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK 141
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
H +IHRD+KPSN+L++ Q+K+ DFG+S + A + G AYM+PER DP
Sbjct: 142 EKHGVIHRDVKPSNILLDERG-QIKLCDFGISGRLVDD-KAKDRSAGCAAYMAPERIDPP 199
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPD--GA 284
D+WS G FP+ + D+ L + +PP LP G
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPY--KNCKTDFEVL-TKVLQEEPPLLPGHMGF 256
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
S +F+SF++ CL K+ KR ++LL H F+
Sbjct: 257 SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 138/266 (51%), Gaps = 12/266 (4%)
Query: 55 KLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQC 114
KL+ +G G+ G V+K T ++ A+K++ + + +E+ +L + DS ++ +
Sbjct: 27 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKY 86
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
+G + K S + I+MEY+ G+ LL + G F E ++A + +ILKGL YLH K IHR
Sbjct: 87 YGSYLKGS-KLWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILKGLDYLHSEKKIHR 144
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
DIK +N+L++ VK+ADFGV+ + + N++VGT +M+PE
Sbjct: 145 DIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-----VIQQSAYD 198
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
DIWS G P P ++ I +PP+L + F+ FI+
Sbjct: 199 SKADIWSLGITAIELAKGEPP--NSDMHP--MRVLFLIPKNNPPTLVGDFTKSFKEFIDA 254
Query: 295 CLQKEFSKRWTASQLLTHPFLCKNRR 320
CL K+ S R TA +LL H F+ KN +
Sbjct: 255 CLNKDPSFRPTAKELLKHKFIVKNSK 280
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 139/278 (50%), Gaps = 25/278 (8%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEI-LRRTDSPF 110
DL+ L +G G G+V K+ H+ + +I A+K + D ++Q+ ++++ +R +D P+
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPY 82
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK-----NGTFSEPKLAHIASQILKGLSY 165
IVQ +G + GD I ME M S + D + E L I +K L++
Sbjct: 83 IVQFYGALFR-EGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 166 LHGH-KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
L + KIIHRDIKPSN+L++ + +K+ DFG+S + S+ A G YM+PER D
Sbjct: 141 LKENLKIIHRDIKPSNILLDRSG-NIKLCDFGISGQLVDSI-AKTRDAGCRPYMAPERID 198
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATL---MCAICFGDPPSLP 281
P D+WS G FP+ P W ++ + + GDPP L
Sbjct: 199 P-SASRQGYDVRSDVWSLGITLYELATGRFPY------PKWNSVFDQLTQVVKGDPPQLS 251
Query: 282 DGA----SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ SP F +F+ CL K+ SKR +LL HPF+
Sbjct: 252 NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 16/265 (6%)
Query: 55 KLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQC 114
KL +G G+ G VYK T ++ A+K++ + + +E+ +L + DSP+I +
Sbjct: 23 KLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRY 82
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
FG + K S + I+MEY+ G+ LL K G E +A I +ILKGL YLH + IHR
Sbjct: 83 FGSYLK-STKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERKIHR 140
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
DIK +N+L++ VK+ADFGV+ + + N +VGT +M+PE
Sbjct: 141 DIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-----VIKQSAYD 194
Query: 235 XXXDIWSXXXXXXXXXXGHFPF--LQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFI 292
DIWS G P L P + ++ I PP+L S F+ F+
Sbjct: 195 FKADIWSLGITAIELAKGEPPNSDLHPMR------VLFLIPKNSPPTLEGQHSKPFKEFV 248
Query: 293 ECCLQKEFSKRWTASQLLTHPFLCK 317
E CL K+ R TA +LL H F+ +
Sbjct: 249 EACLNKDPRFRPTAKELLKHKFITR 273
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 143/274 (52%), Gaps = 20/274 (7%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKV--VHGDADPTVRRQVFREMEILRR-TDSP 109
E ++++G+G G VYK +H T ++ A+KV V GD + +++ E+ +L++ +
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ----EINMLKKYSHHR 81
Query: 110 FIVQCFGIFEK--PSG---DIAILMEYMDSGTLDTLL--NKNGTFSEPKLAHIASQILKG 162
I +G F K P G + ++ME+ +G++ L+ K T E +A+I +IL+G
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
LS+LH HK+IHRDIK N+L+ N +VK+ DFGVS + R++ N+++GT +M+PE
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLL-TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEV 200
Query: 223 FDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPD 282
D D+WS G P P A + I P L
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD--MHPMRALFL--IPRNPAPRLKS 256
Query: 283 GA-SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
S +F+SFIE CL K S+R QL+ HPF+
Sbjct: 257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 134/263 (50%), Gaps = 14/263 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
LG G G VYK +++ T + A KV+ ++ + + E+EIL D P+IV+ G +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV-EIEILATCDHPYIVKLLGAY 85
Query: 119 EKPSGDIAILMEYMDSGTLDT-LLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
G + I++E+ G +D +L + +EP++ + Q+L+ L++LH +IIHRD+K
Sbjct: 86 YH-DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 144
Query: 178 PSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXX 237
N+L+ +++ADFGVS ++L +S++GT +M+PE +
Sbjct: 145 AGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 203
Query: 238 DIWSXXXXXXXXXXGHFPF--LQPGQRPDWATLMCAICFGDPPSL--PDGASPEFRSFIE 293
DIWS P L P + ++ I DPP+L P S EFR F++
Sbjct: 204 DIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSDPPTLLTPSKWSVEFRDFLK 257
Query: 294 CCLQKEFSKRWTASQLLTHPFLC 316
L K R +A+QLL HPF+
Sbjct: 258 IALDKNPETRPSAAQLLEHPFVS 280
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 134/263 (50%), Gaps = 14/263 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
LG G G VYK +++ T + A KV+ ++ + + E+EIL D P+IV+ G +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV-EIEILATCDHPYIVKLLGAY 77
Query: 119 EKPSGDIAILMEYMDSGTLDT-LLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
G + I++E+ G +D +L + +EP++ + Q+L+ L++LH +IIHRD+K
Sbjct: 78 YH-DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLK 136
Query: 178 PSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXX 237
N+L+ +++ADFGVS ++L +S++GT +M+PE +
Sbjct: 137 AGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 195
Query: 238 DIWSXXXXXXXXXXGHFPF--LQPGQRPDWATLMCAICFGDPPSL--PDGASPEFRSFIE 293
DIWS P L P + ++ I DPP+L P S EFR F++
Sbjct: 196 DIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSDPPTLLTPSKWSVEFRDFLK 249
Query: 294 CCLQKEFSKRWTASQLLTHPFLC 316
L K R +A+QLL HPF+
Sbjct: 250 IALDKNPETRPSAAQLLEHPFVS 272
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 130/263 (49%), Gaps = 14/263 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
LG G G VYK Q++ T + A KV+ ++ + + E++IL D P IV+ F
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAF 103
Query: 119 EKPSGDIAILMEYMDSGTLD-TLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
++ IL+E+ G +D +L +E ++ + Q L L+YLH +KIIHRD+K
Sbjct: 104 YY-ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 178 PSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXX 237
N+L + +K+ADFGVS R++ +S++GT +M+PE +
Sbjct: 163 AGNILFTLDG-DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 238 DIWSXXXXXXXXXXGHFPF--LQPGQRPDWATLMCAICFGDPPSL--PDGASPEFRSFIE 293
D+WS P L P + ++ I +PP+L P S F+ F++
Sbjct: 222 DVWSLGITLIEMAEIEPPHHELNPMR------VLLKIAKSEPPTLAQPSRWSSNFKDFLK 275
Query: 294 CCLQKEFSKRWTASQLLTHPFLC 316
CL+K RWT SQLL HPF+
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFVT 298
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 136/279 (48%), Gaps = 21/279 (7%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEI-LRRT 106
+ DLE + LG G G V K++H + +I A+K + + ++++ +++I +R
Sbjct: 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV 107
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDT----LLNKNGTFSEPKLAHIASQILKG 162
D PF V +G + GD+ I ME MD+ +LD +++K T E L IA I+K
Sbjct: 108 DCPFTVTFYGALFR-EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKA 165
Query: 163 LSYLHGH-KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
L +LH +IHRD+KPSN+L+N QVK+ DFG+S + S+ A G YM+PE
Sbjct: 166 LEHLHSKLSVIHRDVKPSNVLINALG-QVKMCDFGISGYLVDSV-AKTIDAGCKPYMAPE 223
Query: 222 RFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWAT---LMCAICFGDPP 278
R +P+ DIWS FP+ W T + + P
Sbjct: 224 RINPE-LNQKGYSVKSDIWSLGITMIELAILRFPY------DSWGTPFQQLKQVVEEPSP 276
Query: 279 SLP-DGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLC 316
LP D S EF F CL+K +R T +L+ HPF
Sbjct: 277 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 315
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 129/263 (49%), Gaps = 14/263 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
LG G G VYK Q++ T + A KV+ ++ + + E++IL D P IV+ F
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAF 103
Query: 119 EKPSGDIAILMEYMDSGTLD-TLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
++ IL+E+ G +D +L +E ++ + Q L L+YLH +KIIHRD+K
Sbjct: 104 YY-ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 178 PSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXX 237
N+L + +K+ADFGVS R + +S++GT +M+PE +
Sbjct: 163 AGNILFTLDG-DIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 238 DIWSXXXXXXXXXXGHFPF--LQPGQRPDWATLMCAICFGDPPSL--PDGASPEFRSFIE 293
D+WS P L P + ++ I +PP+L P S F+ F++
Sbjct: 222 DVWSLGITLIEMAEIEPPHHELNPMR------VLLKIAKSEPPTLAQPSRWSSNFKDFLK 275
Query: 294 CCLQKEFSKRWTASQLLTHPFLC 316
CL+K RWT SQLL HPF+
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFVT 298
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 136/279 (48%), Gaps = 21/279 (7%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEI-LRRT 106
+ DLE + LG G G V K++H + +I A+K + + ++++ +++I +R
Sbjct: 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTV 63
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDT----LLNKNGTFSEPKLAHIASQILKG 162
D PF V +G + GD+ I ME MD+ +LD +++K T E L IA I+K
Sbjct: 64 DCPFTVTFYGALFR-EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKA 121
Query: 163 LSYLHGH-KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
L +LH +IHRD+KPSN+L+N QVK+ DFG+S + + A + G YM+PE
Sbjct: 122 LEHLHSKLSVIHRDVKPSNVLINALG-QVKMCDFGISGYLVDDV-AKDIDAGCKPYMAPE 179
Query: 222 RFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWAT---LMCAICFGDPP 278
R +P+ DIWS FP+ W T + + P
Sbjct: 180 RINPE-LNQKGYSVKSDIWSLGITMIELAILRFPY------DSWGTPFQQLKQVVEEPSP 232
Query: 279 SLP-DGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLC 316
LP D S EF F CL+K +R T +L+ HPF
Sbjct: 233 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 271
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 14/263 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
LG G G VYK Q++ T + A KV+ ++ + + E++IL D P IV+ F
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAF 103
Query: 119 EKPSGDIAILMEYMDSGTLD-TLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
++ IL+E+ G +D +L +E ++ + Q L L+YLH +KIIHRD+K
Sbjct: 104 YY-ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 162
Query: 178 PSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXX 237
N+L + +K+ADFGVS R + + ++GT +M+PE +
Sbjct: 163 AGNILFTLDG-DIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKA 221
Query: 238 DIWSXXXXXXXXXXGHFPF--LQPGQRPDWATLMCAICFGDPPSL--PDGASPEFRSFIE 293
D+WS P L P + ++ I +PP+L P S F+ F++
Sbjct: 222 DVWSLGITLIEMAEIEPPHHELNPMR------VLLKIAKSEPPTLAQPSRWSSNFKDFLK 275
Query: 294 CCLQKEFSKRWTASQLLTHPFLC 316
CL+K RWT SQLL HPF+
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFVT 298
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 133/267 (49%), Gaps = 16/267 (5%)
Query: 57 QVLGH-GNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
+++G G+ G VYK Q++ T + A KV+ ++ + + E++IL D P IV+
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLL 73
Query: 116 GIFEKPSGDIAILMEYMDSGTLD-TLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
F ++ IL+E+ G +D +L +E ++ + Q L L+YLH +KIIHR
Sbjct: 74 DAFYY-ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 132
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRS-LDACNSYVGTCAYMSPERFDPDXXXXXXX 233
D+K N+L + +K+ADFGVS R+ + +S++GT +M+PE +
Sbjct: 133 DLKAGNILFTLDG-DIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 234 XXXXDIWSXXXXXXXXXXGHFPF--LQPGQRPDWATLMCAICFGDPPSL--PDGASPEFR 289
D+WS P L P + ++ I +PP+L P S F+
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHELNPMR------VLLKIAKSEPPTLAQPSRWSSNFK 245
Query: 290 SFIECCLQKEFSKRWTASQLLTHPFLC 316
F++ CL+K RWT SQLL HPF+
Sbjct: 246 DFLKKCLEKNVDARWTTSQLLQHPFVT 272
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 131/279 (46%), Gaps = 21/279 (7%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRT- 106
+ DLE + LG G G V K +H + +I A+K + + ++++ +++I RT
Sbjct: 31 VKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTV 90
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDT----LLNKNGTFSEPKLAHIASQILKG 162
D PF V +G + GD+ I E D+ +LD +++K T E L IA I+K
Sbjct: 91 DCPFTVTFYGALFR-EGDVWICXELXDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKA 148
Query: 163 LSYLHGH-KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
L +LH +IHRD+KPSN+L+N QVK DFG+S + + A + G Y +PE
Sbjct: 149 LEHLHSKLSVIHRDVKPSNVLINALG-QVKXCDFGISGYLVDDV-AKDIDAGCKPYXAPE 206
Query: 222 RFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWAT---LMCAICFGDPP 278
R +P+ DIWS FP+ W T + + P
Sbjct: 207 RINPE-LNQKGYSVKSDIWSLGITXIELAILRFPY------DSWGTPFQQLKQVVEEPSP 259
Query: 279 SLP-DGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLC 316
LP D S EF F CL+K +R T +L HPF
Sbjct: 260 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFT 298
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 123/261 (47%), Gaps = 10/261 (3%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
VLG G G VY + A+K + + D + + E+ + + IVQ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 118 FEKPSGDIAILMEYMDSGTLDTLL-NKNGTF--SEPKLAHIASQILKGLSYLHGHKIIHR 174
F + +G I I ME + G+L LL +K G +E + QIL+GL YLH ++I+HR
Sbjct: 88 FSE-NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
DIK N+L+N + +KI+DFG SK + ++ GT YM+PE D
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIID---KGPRGYG 203
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
DIWS G PF + G+ P A + F P +P+ S E ++FI
Sbjct: 204 KAADIWSLGCTIIEMATGKPPFYELGE-PQAAMFKVGM-FKVHPEIPESMSAEAKAFILK 261
Query: 295 CLQKEFSKRWTASQLLTHPFL 315
C + + KR A+ LL FL
Sbjct: 262 CFEPDPDKRACANDLLVDEFL 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 123/261 (47%), Gaps = 10/261 (3%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
VLG G G VY + A+K + + D + + E+ + + IVQ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIP-ERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 118 FEKPSGDIAILMEYMDSGTLDTLL-NKNGTF--SEPKLAHIASQILKGLSYLHGHKIIHR 174
F + +G I I ME + G+L LL +K G +E + QIL+GL YLH ++I+HR
Sbjct: 74 FSE-NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
DIK N+L+N + +KI+DFG SK + ++ GT YM+PE D
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIID---KGPRGYG 189
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
DIWS G PF + G+ P A + F P +P+ S E ++FI
Sbjct: 190 KAADIWSLGCTIIEMATGKPPFYELGE-PQAAMFKVGM-FKVHPEIPESMSAEAKAFILK 247
Query: 295 CLQKEFSKRWTASQLLTHPFL 315
C + + KR A+ LL FL
Sbjct: 248 CFEPDPDKRACANDLLVDEFL 268
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
+LG G+ G V K + R T + YA+KV++ A + RE+E+L++ D P I++ F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
I E S I+ E G L + K FSE A I Q+ G++Y+H H I+HRD+
Sbjct: 89 ILEDSSS-FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 177 KPSNLLVNNNNM--QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
KP N+L+ + +KI DFG+S ++ +GT Y++PE
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPE------VLRGTYD 200
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
D+WS G PF + + D P S + + I
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR-TISDDAKDLIRK 259
Query: 295 CLQKEFSKRWTASQLLTHPFLCK 317
L S R TA+Q L HP++ K
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 120/263 (45%), Gaps = 12/263 (4%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
+LG G+ G V K + R T + YA+KV++ A + RE+E+L++ D P I++ F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
I E S I+ E G L + K FSE A I Q+ G++Y+H H I+HRD+
Sbjct: 89 ILEDSSS-FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 177 KPSNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
KP N+L+ + + +KI DFG+S ++ + +GT Y++PE
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR-IGTAYYIAPE------VLRGTYD 200
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
D+WS G PF + + D P S + + I
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR-TISDDAKDLIRK 259
Query: 295 CLQKEFSKRWTASQLLTHPFLCK 317
L S R TA+Q L HP++ K
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 120/263 (45%), Gaps = 12/263 (4%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
+LG G+ G V K + R T + YA+KV++ A + RE+E+L++ D P I++ F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
I E S I+ E G L + K FSE A I Q+ G++Y+H H I+HRD+
Sbjct: 89 ILEDSSS-FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 177 KPSNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
KP N+L+ + + +KI DFG+S ++ + +GT Y++PE
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR-IGTAYYIAPE------VLRGTYD 200
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
D+WS G PF + + D P S + + I
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWR-TISDDAKDLIRK 259
Query: 295 CLQKEFSKRWTASQLLTHPFLCK 317
L S R TA+Q L HP++ K
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQK 282
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 32/297 (10%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
I D E +V+G G V + A+K ++ + T ++ +E++ + +
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLL--------NKNGTFSEPKLAHIASQI 159
P IV + F ++ ++M+ + G++ ++ +K+G E +A I ++
Sbjct: 72 HPNIVSYYTSF-VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC-----NSYVGT 214
L+GL YLH + IHRD+K N+L+ + V+IADFGVS + D ++VGT
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDG-SVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 215 CAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICF 274
+M+PE + DIWS G P+ + P LM +
Sbjct: 190 PCWMAPEVME----QVRGYDFKADIWSFGITAIELATGAAPY---HKYPPMKVLMLTLQ- 241
Query: 275 GDPPSLPDGASPE---------FRSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSD 322
DPPSL G + FR I CLQK+ KR TA++LL H F K + +
Sbjct: 242 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKE 298
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 32/294 (10%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
I D E +V+G G V + A+K ++ + T ++ +E++ + +
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLL--------NKNGTFSEPKLAHIASQI 159
P IV + F ++ ++M+ + G++ ++ +K+G E +A I ++
Sbjct: 67 HPNIVSYYTSF-VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC-----NSYVGT 214
L+GL YLH + IHRD+K N+L+ + V+IADFGVS + D ++VGT
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGEDG-SVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 215 CAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICF 274
+M+PE + DIWS G P+ + P LM +
Sbjct: 185 PCWMAPEVME----QVRGYDFKADIWSFGITAIELATGAAPY---HKYPPMKVLMLTLQ- 236
Query: 275 GDPPSLPDGASPE---------FRSFIECCLQKEFSKRWTASQLLTHPFLCKNR 319
DPPSL G + FR I CLQK+ KR TA++LL H F K +
Sbjct: 237 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
LG G VY+ + + T K YALKV+ D + R E+ +L R P I++ IF
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT---EIGVLLRLSHPNIIKLKEIF 117
Query: 119 EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKP 178
E P+ +I++++E + G L + + G +SE A QIL+ ++YLH + I+HRD+KP
Sbjct: 118 ETPT-EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKP 176
Query: 179 SNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE-----RFDPDXXXXX 231
NLL + +KIADFG+SKI+ + + GT Y +PE + P+
Sbjct: 177 ENLLYATPAPDAPLKIADFGLSKIVEHQV-LMKTVCGTPGYCAPEILRGCAYGPE----- 230
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW----ATLMCAICFGDPPSLPDGASPE 287
D+WS G PF +R D L C F P D S
Sbjct: 231 -----VDMWSVGIITYILLCGFEPFYD--ERGDQFMFRRILNCEYYFISP--WWDEVSLN 281
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFLC 316
+ + + + KR T Q L HP++
Sbjct: 282 AKDLVRKLIVLDPKKRLTTFQALQHPWVT 310
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 18/262 (6%)
Query: 51 SDLEKLQVLGHGNGGTVY---KVQHRCTHKIYALKVVHGDADPTVRRQVFREME--ILRR 105
S E L+VLG G+ G V+ K+ ++YA+KV+ A VR +V +ME IL
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-KATLKVRDRVRTKMERDILVE 83
Query: 106 TDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
+ PFIV+ F+ G + ++++++ G L T L+K F+E + +++ L +
Sbjct: 84 VNHPFIVKLHYAFQ-TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 142
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDP 225
LH II+RD+KP N+L++ +K+ DFG+SK S+ GT YM+PE +
Sbjct: 143 LHSLGIIYRDLKPENILLDEEG-HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN- 200
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D WS G PF Q R + T++ G P L S
Sbjct: 201 ----RRGHTQSADWWSFGVLMFEMLTGTLPF-QGKDRKETMTMILKAKLGMPQFL----S 251
Query: 286 PEFRSFIECCLQKEFSKRWTAS 307
PE +S + ++ + R A
Sbjct: 252 PEAQSLLRMLFKRNPANRLGAG 273
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 18/262 (6%)
Query: 51 SDLEKLQVLGHGNGGTVY---KVQHRCTHKIYALKVVHGDADPTVRRQVFREME--ILRR 105
S E L+VLG G+ G V+ K+ ++YA+KV+ A VR +V +ME IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-KATLKVRDRVRTKMERDILVE 82
Query: 106 TDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
+ PFIV+ F+ G + ++++++ G L T L+K F+E + +++ L +
Sbjct: 83 VNHPFIVKLHYAFQ-TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDP 225
LH II+RD+KP N+L++ +K+ DFG+SK S+ GT YM+PE +
Sbjct: 142 LHSLGIIYRDLKPENILLDEEG-HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN- 199
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D WS G PF Q R + T++ G P L S
Sbjct: 200 ----RRGHTQSADWWSFGVLMFEMLTGTLPF-QGKDRKETMTMILKAKLGMPQFL----S 250
Query: 286 PEFRSFIECCLQKEFSKRWTAS 307
PE +S + ++ + R A
Sbjct: 251 PEAQSLLRMLFKRNPANRLGAG 272
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 123/262 (46%), Gaps = 18/262 (6%)
Query: 51 SDLEKLQVLGHGNGGTVY---KVQHRCTHKIYALKVVHGDADPTVRRQVFREME--ILRR 105
S E L+VLG G+ G V+ K+ ++YA+KV+ A VR +V +ME IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-KATLKVRDRVRTKMERDILVE 82
Query: 106 TDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
+ PFIV+ F+ G + ++++++ G L T L+K F+E + +++ L +
Sbjct: 83 VNHPFIVKLHYAFQ-TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDP 225
LH II+RD+KP N+L++ +K+ DFG+SK S+ GT YM+PE +
Sbjct: 142 LHSLGIIYRDLKPENILLDEEG-HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN- 199
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D WS G PF Q R + T++ G +P S
Sbjct: 200 ----RRGHTQSADWWSFGVLMFEMLTGTLPF-QGKDRKETMTMILKAKLG----MPQFLS 250
Query: 286 PEFRSFIECCLQKEFSKRWTAS 307
PE +S + ++ + R A
Sbjct: 251 PEAQSLLRMLFKRNPANRLGAG 272
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 20/264 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG G G VY + R + I ALKV+ V Q+ RE+EI P I++ +G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
F + + +++EY GT+ L K F E + A +++ LSY H ++IHRDI
Sbjct: 80 YFHDAT-RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 177 KPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
KP NLL+ +N ++KIADFG V R C GT Y+ PE +
Sbjct: 139 KPENLLLGSNG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIE-----GRMHD 188
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
D+WS G PF + + + + F P + +GA R I
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI-SRVEFTFPDFVTEGA----RDLISR 243
Query: 295 CLQKEFSKRWTASQLLTHPFLCKN 318
L+ S+R T +++L HP++ N
Sbjct: 244 LLKHNASQRLTLAEVLEHPWIKAN 267
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 55 KLQVLGHGNGGTVYKVQHRCTHKIYALKVV---------HGDADPTVRR---QVFREMEI 102
K++ LG G G V + + H A+KV+ + D + + + +++ E+ +
Sbjct: 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILK 161
L+ D P I++ F +FE ++ E+ + G L + ++N++ F E A+I QIL
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKY-FYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILS 157
Query: 162 GLSYLHGHKIIHRDIKPSNLLVNNNN--MQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
G+ YLH H I+HRDIKP N+L+ N N + +KI DFG+S + +GT Y++
Sbjct: 158 GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY-KLRDRLGTAYYIA 216
Query: 220 PERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCA------IC 273
PE D+WS G+ PF G + D +
Sbjct: 217 PEVLKK------KYNEKCDVWSCGVIMYILLCGYPPF---GGQNDQDIIKKVEKGKYYFD 267
Query: 274 FGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
F D ++ D A + I+ L +++KR TA + L ++ K
Sbjct: 268 FNDWKNISDEA----KELIKLMLTYDYNKRCTAEEALNSRWIKK 307
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 122/275 (44%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 92 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 151 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--- 206
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ A P+ P
Sbjct: 207 --TEKSAXKSSDLWALGCIIYQLVAGLPPF-----RAGNEGLIFAKIIKLEYDFPEKFFP 259
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 260 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 131/275 (47%), Gaps = 15/275 (5%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV--HGDADPTVRRQVFREMEILRRT 106
++ + K ++LG G G V+K + T A K++ G D + +V E+ ++ +
Sbjct: 87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD---KEEVKNEISVMNQL 143
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSY 165
D ++Q + FE + DI ++MEY+D G L D +++++ +E QI +G+ +
Sbjct: 144 DHANLIQLYDAFESKN-DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRH 202
Query: 166 LHGHKIIHRDIKPSNLL-VNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
+H I+H D+KP N+L VN + Q+KI DFG+++ + + GT +++PE +
Sbjct: 203 MHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR-RYKPREKLKVNFGTPEFLAPEVVN 261
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D D+WS G PFL ++ + D
Sbjct: 262 YD-----FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQD-I 315
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNR 319
S E + FI L KE S R +AS+ L HP+L ++
Sbjct: 316 SEEAKEFISKLLIKEKSWRISASEALKHPWLSDHK 350
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 16/262 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG G G VY + R + I ALKV+ V Q+ RE+EI P I++ +G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
F + + +++EY GT+ L K F E + A +++ LSY H ++IHRDI
Sbjct: 80 YFHDAT-RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXX 236
KP NLL+ +N ++KIADFG S S ++ GT Y+ PE +
Sbjct: 139 KPENLLLGSNG-ELKIADFGWSVHAPSS--RRDTLCGTLDYLPPEMIE-----GRMHDEK 190
Query: 237 XDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCL 296
D+WS G PF + + + + F P + +GA R I L
Sbjct: 191 VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI-SRVEFTFPDFVTEGA----RDLISRLL 245
Query: 297 QKEFSKRWTASQLLTHPFLCKN 318
+ S+R T +++L HP++ N
Sbjct: 246 KHNASQRLTLAEVLEHPWIKAN 267
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 20/268 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR-----QVFREMEILRRTDSPFIVQ 113
LG G V K + + T YA K + RR ++ RE+ ILR+ P I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + SE + QIL G++YLH KI H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE--RFDPDXX 228
D+KP N+++ + N+ +K+ DFG++ + ++ N + GT +++PE ++P
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIVNYEP--- 194
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEF 288
D+WS G PFL ++ A + A+ + S
Sbjct: 195 ----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSELA 249
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLC 316
+ FI L KE KR T + L HP++
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 122/272 (44%), Gaps = 16/272 (5%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F S + +++EY GT+ L K F E + A +++ LSY
Sbjct: 66 RHPNILRLYGYFHD-STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
H K+IHRDIKP NLL+ + ++KIADFG S S A + GT Y+ PE +
Sbjct: 125 HSKKVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRA--ALCGTLDYLPPEMIE-- 179
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+WS G PF + D + + F P + +GA
Sbjct: 180 ---GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQDTYKRISRVEFTFPDFVTEGA-- 233
Query: 287 EFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 234 --RDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 121/275 (44%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 92 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 151 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--- 206
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ A P+ P
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEGLIFAKIIKLEYDFPEKFFP 259
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 260 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 121/275 (44%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 92 PFFVKLYFTFQDDE-KLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A NS+VGT Y+SPE
Sbjct: 151 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL--- 206
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 207 --TEKSASKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 259
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 260 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 14/248 (5%)
Query: 51 SDLEKLQVLGHGNGGTVY---KVQHRCTHKIYALKVVHGDADPTVRRQVFREME--ILRR 105
S E L+VLG G+ G V+ KV + +YA+KV+ A VR +V +ME IL
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLK-KATLKVRDRVRTKMERDILAD 86
Query: 106 TDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
+ PF+V+ F+ G + ++++++ G L T L+K F+E + +++ GL +
Sbjct: 87 VNHPFVVKLHYAFQ-TEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDH 145
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDP 225
LH II+RD+KP N+L++ +K+ DFG+SK S+ GT YM+PE +
Sbjct: 146 LHSLGIIYRDLKPENILLDEEG-HIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN- 203
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D WS G PF Q R + TL+ G P L A
Sbjct: 204 ----RQGHSHSADWWSYGVLMFEMLTGSLPF-QGKDRKETMTLILKAKLGMPQFLSTEAQ 258
Query: 286 PEFRSFIE 293
R+ +
Sbjct: 259 SLLRALFK 266
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 121/275 (44%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 89 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A NS+VGT Y+SPE
Sbjct: 148 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE----- 201
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 256
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 257 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 291
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 14/266 (5%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSP 109
Y+ EK+ G G GTVY T + A++ ++ P + + E+ ++R +P
Sbjct: 22 YTRFEKI---GQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNP 77
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
IV + ++ ++MEY+ G+L ++ + E ++A + + L+ L +LH +
Sbjct: 78 NIVNYLDSY-LVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 135
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
++IHRDIK N+L+ + VK+ DFG + + VGT +M+PE
Sbjct: 136 QVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-----VVT 189
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFR 289
DIWS G P+L + P A + A P+ S FR
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPELQNPEKLSAIFR 247
Query: 290 SFIECCLQKEFSKRWTASQLLTHPFL 315
F+ CL+ + KR +A +LL H FL
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 14/266 (5%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSP 109
Y+ EK+ G G GTVY T + A++ ++ P + + E+ ++R +P
Sbjct: 22 YTRFEKI---GQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNP 77
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
IV + ++ ++MEY+ G+L ++ + E ++A + + L+ L +LH +
Sbjct: 78 NIVNYLDSY-LVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 135
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
++IHRDIK N+L+ + VK+ DFG + ++ VGT +M+PE
Sbjct: 136 QVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-----VVT 189
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFR 289
DIWS G P+L + P A + A P+ S FR
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPELQNPEKLSAIFR 247
Query: 290 SFIECCLQKEFSKRWTASQLLTHPFL 315
F+ CL + KR +A +LL H FL
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 121/275 (44%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 93 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A NS+VGT Y+SPE
Sbjct: 152 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL--- 207
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 208 --TEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 260
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 261 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 14/266 (5%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSP 109
Y+ EK+ G G GTVY T + A++ ++ P + + E+ ++R +P
Sbjct: 23 YTRFEKI---GQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNP 78
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
IV + ++ ++MEY+ G+L ++ + E ++A + + L+ L +LH +
Sbjct: 79 NIVNYLDSY-LVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 136
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
++IHRDIK N+L+ + VK+ DFG + + VGT +M+PE
Sbjct: 137 QVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-----VVT 190
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFR 289
DIWS G P+L + P A + A P+ S FR
Sbjct: 191 RKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPELQNPEKLSAIFR 248
Query: 290 SFIECCLQKEFSKRWTASQLLTHPFL 315
F+ CL+ + KR +A +L+ H FL
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 14/266 (5%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSP 109
Y+ EK+ G G GTVY T + A++ ++ P + + E+ ++R +P
Sbjct: 22 YTRFEKI---GQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNP 77
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
IV + ++ ++MEY+ G+L ++ + E ++A + + L+ L +LH +
Sbjct: 78 NIVNYLDSY-LVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 135
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
++IHRDIK N+L+ + VK+ DFG + + VGT +M+PE
Sbjct: 136 QVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPE-----VVT 189
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFR 289
DIWS G P+L + P A + A P+ S FR
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPELQNPEKLSAIFR 247
Query: 290 SFIECCLQKEFSKRWTASQLLTHPFL 315
F+ CL + KR +A +LL H FL
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 122/273 (44%), Gaps = 16/273 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR-----QVFREMEILRRTDSPFIVQ 113
LG G V K + + T K YA K + + RR ++ RE+ ILR P I+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
IFE + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 73 LHDIFENKT-DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 131
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++K+ DFG+ ++A N + + +PE P+
Sbjct: 132 FDLKPENIMLLDKNVPNPRIKLIDFGI----AHKIEAGNEF--KNIFGTPEFVAPEIVNY 185
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ + T + A+ + S +
Sbjct: 186 EPLGLEADMWSIGVITYILLSGASPFLGETKQ-ETLTNISAVNYDFDEEYFSNTSELAKD 244
Query: 291 FIECCLQKEFSKRWTASQLLTHPFLCKNRRSDC 323
FI L K+ +R T +Q L H ++ RR +
Sbjct: 245 FIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNV 277
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 126/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R D C GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIE 179
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 180 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 234 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 270
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 67 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R D C GT Y+ PE +
Sbjct: 126 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIE 180
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 181 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 234
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 235 ----RDLISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R D C GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIE 179
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 180 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 234 ----RDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 121/275 (44%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 90 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N++VGT Y+SPE
Sbjct: 149 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL--- 204
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 205 --TEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 257
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 258 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 126/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 71 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R D C GT Y+ PE +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIE 184
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 185 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 239 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 275
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 120/270 (44%), Gaps = 24/270 (8%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVV---HGDADPTVRRQVFREMEILRRTDSPFIVQ 113
++LG G+ TV + T + YA+K++ H + V V RE +++ R D PF V+
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP-YVTRERDVMSRLDHPFFVK 72
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
+ F+ + + Y +G L + K G+F E ++I+ L YLHG IIH
Sbjct: 73 LYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIH 131
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPDXXXXX 231
RD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 132 RDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-----LLTEK 185
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSF 291
D+W+ G PF R L+ P+ P+ R
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFPKARDL 240
Query: 292 IECCLQKEFSKRWTASQ------LLTHPFL 315
+E L + +KR + L HPF
Sbjct: 241 VEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 24/276 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV---HGDADPTVRRQVFREMEILRRTD 107
D + ++LG G+ TV + T + YA+K++ H + V V RE +++ R D
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP-YVTRERDVMSRLD 67
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLH
Sbjct: 68 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 126
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDP 225
G IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 127 GKGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---- 181
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D+W+ G PF R L+ P+
Sbjct: 182 -LLTEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFF 235
Query: 286 PEFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
P+ R +E L + +KR + L HPF
Sbjct: 236 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 271
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 120/270 (44%), Gaps = 24/270 (8%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVV---HGDADPTVRRQVFREMEILRRTDSPFIVQ 113
++LG G+ TV + T + YA+K++ H + V V RE +++ R D PF V+
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP-YVTRERDVMSRLDHPFFVK 71
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
+ F+ + + Y +G L + K G+F E ++I+ L YLHG IIH
Sbjct: 72 LYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIH 130
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPDXXXXX 231
RD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 131 RDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-----LLTEK 184
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSF 291
D+W+ G PF R L+ P+ P+ R
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFPKARDL 239
Query: 292 IECCLQKEFSKRWTASQ------LLTHPFL 315
+E L + +KR + L HPF
Sbjct: 240 VEKLLVLDATKRLGCEEMEGYGPLKAHPFF 269
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 89 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 148 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE----- 201
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 256
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 257 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 291
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 14/266 (5%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSP 109
Y+ EK+ G G GTVY T + A++ ++ P + + E+ ++R +P
Sbjct: 23 YTRFEKI---GQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNP 78
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
IV + ++ ++MEY+ G+L ++ + E ++A + + L+ L +LH +
Sbjct: 79 NIVNYLDSY-LVGDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN 136
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
++IHR+IK N+L+ + VK+ DFG + ++ VGT +M+PE
Sbjct: 137 QVIHRNIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-----VVT 190
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFR 289
DIWS G P+L + P A + A P+ S FR
Sbjct: 191 RKAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPELQNPEKLSAIFR 248
Query: 290 SFIECCLQKEFSKRWTASQLLTHPFL 315
F+ CL+ + KR +A +L+ H FL
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 92 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 151 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--- 206
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 259
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 260 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 122/276 (44%), Gaps = 24/276 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV---HGDADPTVRRQVFREMEILRRTD 107
D + ++LG G+ TV + T + YA+K++ H + V V RE +++ R D
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP-YVTRERDVMSRLD 68
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLH
Sbjct: 69 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 127
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDP 225
G IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 128 GKGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---- 182
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D+W+ G PF R L+ P+
Sbjct: 183 -LLTEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFF 236
Query: 286 PEFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
P+ R +E L + +KR + L HPF
Sbjct: 237 PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 272
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 74 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 133 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE----- 186
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 241
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 242 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 276
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 90 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 149 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--- 204
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 205 --TEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 257
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 258 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R D C GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIE 182
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 183 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 237 ----RDLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 90 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 149 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--- 204
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 205 --TEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 257
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 258 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 92 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 151 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--- 206
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 259
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 260 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 92 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 151 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--- 206
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 207 --TEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 259
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 260 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 93 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 152 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--- 207
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 208 --TEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 260
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 261 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 126/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 92 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R D C GT Y+ PE +
Sbjct: 151 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIE 205
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 206 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 259
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 260 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 296
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R + C GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTELC----GTLDYLPPEMIE 179
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 180 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 234 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 270
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 6/175 (3%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 95 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPE 221
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 154 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ TV + T + YA+K++ + V RE +++ R D
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 97 PFFVKLYFCFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 156 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--- 211
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 212 --TEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 264
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 265 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 299
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 31/269 (11%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV--------HGDADPTVRRQVFRE 99
+ +D +++G G G VY + T K+YA+K + G+ R +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM--- 242
Query: 100 MEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
+ ++ D PFIV F P ++ +++ M+ G L L+++G FSE + A++I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCR-SLDACNSYVGTCAYM 218
+ GL ++H +++RD+KP+N+L++ + V+I+D G++ C S ++ VGT YM
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLA---CDFSKKKPHASVGTHGYM 357
Query: 219 SPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRP----DWATLMCAICF 274
+PE D +S GH PF Q + D TL A+
Sbjct: 358 APEVLQ----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-- 411
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKR 303
LPD SPE RS +E LQ++ ++R
Sbjct: 412 ----ELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 31/269 (11%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV--------HGDADPTVRRQVFRE 99
+ +D +++G G G VY + T K+YA+K + G+ R +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM--- 242
Query: 100 MEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
+ ++ D PFIV F P ++ +++ M+ G L L+++G FSE + A++I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCR-SLDACNSYVGTCAYM 218
+ GL ++H +++RD+KP+N+L++ + V+I+D G++ C S ++ VGT YM
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLA---CDFSKKKPHASVGTHGYM 357
Query: 219 SPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRP----DWATLMCAICF 274
+PE D +S GH PF Q + D TL A+
Sbjct: 358 APEVLQ----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-- 411
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKR 303
LPD SPE RS +E LQ++ ++R
Sbjct: 412 ----ELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 31/269 (11%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV--------HGDADPTVRRQVFRE 99
+ +D +++G G G VY + T K+YA+K + G+ R +
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM--- 241
Query: 100 MEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
+ ++ D PFIV F P ++ +++ M+ G L L+++G FSE + A++I
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 300
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCR-SLDACNSYVGTCAYM 218
+ GL ++H +++RD+KP+N+L++ + V+I+D G++ C S ++ VGT YM
Sbjct: 301 ILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLA---CDFSKKKPHASVGTHGYM 356
Query: 219 SPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRP----DWATLMCAICF 274
+PE D +S GH PF Q + D TL A+
Sbjct: 357 APEVLQ----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-- 410
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKR 303
LPD SPE RS +E LQ++ ++R
Sbjct: 411 ----ELPDSFSPELRSLLEGLLQRDVNRR 435
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 31/269 (11%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV--------HGDADPTVRRQVFRE 99
+ +D +++G G G VY + T K+YA+K + G+ R +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM--- 242
Query: 100 MEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
+ ++ D PFIV F P ++ +++ M+ G L L+++G FSE + A++I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCR-SLDACNSYVGTCAYM 218
+ GL ++H +++RD+KP+N+L++ + V+I+D G++ C S ++ VGT YM
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLA---CDFSKKKPHASVGTHGYM 357
Query: 219 SPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRP----DWATLMCAICF 274
+PE D +S GH PF Q + D TL A+
Sbjct: 358 APEVLQ----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-- 411
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKR 303
LPD SPE RS +E LQ++ ++R
Sbjct: 412 ----ELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 10/262 (3%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
+ LG G V + + T K++A+K + A + E+ +LR+ IV
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 87
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
I+E P+ + ++M+ + G L + + G ++E + + Q+L + YLH I+HRD+
Sbjct: 88 IYESPN-HLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDL 146
Query: 177 KPSNLLVNNNNMQVK--IADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
KP NLL + + + K I+DFG+SK+ + D ++ GT Y++PE
Sbjct: 147 KPENLLYYSQDEESKIMISDFGLSKMEGKG-DVMSTACGTPGYVAPEVL-----AQKPYS 200
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
D WS G+ PF + ++ A D P D S + FI
Sbjct: 201 KAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDD-ISDSAKDFIRN 259
Query: 295 CLQKEFSKRWTASQLLTHPFLC 316
++K+ +KR+T Q HP++
Sbjct: 260 LMEKDPNKRYTCEQAARHPWIA 281
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 122/272 (44%), Gaps = 16/272 (5%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
H ++IHRDIKP NLL+ + ++KIADFG S S A + GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRA--ALCGTLDYLPPEMIE-- 179
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+WS G PF + + + + F P + +GA
Sbjct: 180 ---GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA-- 233
Query: 287 EFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 234 --RDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 16/273 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR-----QVFREMEILRRTDSPFIVQ 113
LG G V K + + T K YA K + + RR ++ RE+ ILR P I+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
IFE + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 94 LHDIFENKT-DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 152
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++K+ DFG+ ++A N + + +PE P+
Sbjct: 153 FDLKPENIMLLDKNVPNPRIKLIDFGI----AHKIEAGNEF--KNIFGTPEFVAPEIVNY 206
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL + + T + A+ + S +
Sbjct: 207 EPLGLEADMWSIGVITYILLSGASPFLGE-TKQETLTNISAVNYDFDEEYFSNTSELAKD 265
Query: 291 FIECCLQKEFSKRWTASQLLTHPFLCKNRRSDC 323
FI L K+ +R +Q L H ++ RR +
Sbjct: 266 FIRRLLVKDPKRRMXIAQSLEHSWIKAIRRRNV 298
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 126/279 (45%), Gaps = 18/279 (6%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
H ++IHRDIKP NLL+ + ++KIADFG S S A + GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRA--ALCGTLDYLPPEMIE-- 182
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+WS G PF + + + + F P + +GA
Sbjct: 183 ---GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA-- 236
Query: 287 EFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 237 --RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 273
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ +G G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEYM G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +K+ADFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 121/274 (44%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 182
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 183 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 237 ----RDLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 121/274 (44%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 65 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 123
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 124 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 178
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 179 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 232
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 233 ----RDLISRLLKHNPSQRPMLREVLEHPWITAN 262
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 22/275 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDS 108
D + ++LG G+ T + T + YA+K++ + V RE +++ R D
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF V+ + F+ + + Y +G L + K G+F E ++I+ L YLHG
Sbjct: 90 PFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDA-CNSYVGTCAYMSPERFDPD 226
IIHRD+KP N+L+ N +M ++I DFG +K++ S A N +VGT Y+SPE
Sbjct: 149 KGIIHRDLKPENILL-NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL--- 204
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+W+ G PF R L+ P+ P
Sbjct: 205 --TEKSACKSSDLWALGCIIYQLVAGLPPF-----RAGNEYLIFQKIIKLEYDFPEKFFP 257
Query: 287 EFRSFIECCLQKEFSKRWTASQ------LLTHPFL 315
+ R +E L + +KR + L HPF
Sbjct: 258 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 125/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 179
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 180 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 234 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 270
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 121/274 (44%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 70 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 128
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 129 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 183
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 184 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 237
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 238 ----RDLISRLLKHNPSQRPMLREVLEHPWITAN 267
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 18/273 (6%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 67 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYV-GTCAYMSPERFDP 225
H ++IHRDIKP NLL+ + ++KIADFG S C + + + + GT Y+ PE +
Sbjct: 126 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIE- 180
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D+WS G PF + + + + F P + +GA
Sbjct: 181 ----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA- 234
Query: 286 PEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 235 ---RDLISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ +G G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEYM G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +K+ADFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 121/274 (44%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIE 182
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 183 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 237 ----RDLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 121/274 (44%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIE 179
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 180 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 234 ----RDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 121/274 (44%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 66 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTXLC----GTLDYLPPEMIE 179
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 180 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 234 ----RDLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 71 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEXIE 184
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 185 -----GRXHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 239 ----RDLISRLLKHNPSQRPXLREVLEHPWITAN 268
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 18/273 (6%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH--GDADPTVRRQVFREMEILRRTD 107
+SDL ++ GHG+ G VY + ++ A+K + G + + +E+ L++
Sbjct: 56 FSDLREI---GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
P +Q G + + ++MEY D L E ++A + L+GL+YLH
Sbjct: 113 HPNTIQYRGCYLR-EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
H +IHRD+K N+L++ + VK+ DFG + IM N +VGT +M+PE
Sbjct: 172 SHNMIHRDVKAGNILLSEPGL-VKLGDFGSASIMA----PANXFVGTPYWMAPEVI--LA 224
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPE 287
D+WS P + + I + P+L G E
Sbjct: 225 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYHIAQNESPALQSGHWSE 280
Query: 288 -FRSFIECCLQKEFSKRWTASQLLTHPFLCKNR 319
FR+F++ CLQK R T+ LL H F+ + R
Sbjct: 281 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 313
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 125/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 71 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 184
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 185 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 239 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 20/268 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR-----QVFREMEILRRTDSPFIVQ 113
LG G V K + + T YA K + RR ++ RE+ ILR+ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + SE + QIL G++YLH KI H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE--RFDPDXX 228
D+KP N+++ + N+ +K+ DFG++ + ++ N + GT +++PE ++P
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIVNYEP--- 194
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEF 288
D+WS G PFL ++ A + A+ + S
Sbjct: 195 ----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSELA 249
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLC 316
+ FI L KE KR T + L HP++
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 18/273 (6%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH--GDADPTVRRQVFREMEILRRTD 107
+SDL ++ GHG+ G VY + ++ A+K + G + + +E+ L++
Sbjct: 17 FSDLREI---GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
P +Q G + + ++MEY D L E ++A + L+GL+YLH
Sbjct: 74 HPNTIQYRGCYLR-EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
H +IHRD+K N+L++ + VK+ DFG + IM N +VGT +M+PE
Sbjct: 133 SHNMIHRDVKAGNILLSEPGL-VKLGDFGSASIMA----PANXFVGTPYWMAPEVI--LA 185
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPE 287
D+WS P + + I + P+L G E
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYHIAQNESPALQSGHWSE 241
Query: 288 -FRSFIECCLQKEFSKRWTASQLLTHPFLCKNR 319
FR+F++ CLQK R T+ LL H F+ + R
Sbjct: 242 YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 125/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 182
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 183 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 237 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 273
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 20/268 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR-----QVFREMEILRRTDSPFIVQ 113
LG G V K + + T YA K + RR ++ RE+ ILR+ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + SE + QIL G++YLH KI H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE--RFDPDXX 228
D+KP N+++ + N+ +K+ DFG++ + ++ N + GT +++PE ++P
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIVNYEP--- 194
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEF 288
D+WS G PFL ++ A + A+ + S
Sbjct: 195 ----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSELA 249
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLC 316
+ FI L KE KR T + L HP++
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 125/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 68 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 127 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIE 181
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 182 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 235
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 236 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 272
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 125/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 83 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 141
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 142 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 196
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 197 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 250
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 251 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 287
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 125/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 92 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 151 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 205
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 206 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 259
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 260 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 296
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 122/272 (44%), Gaps = 16/272 (5%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 67 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
H ++IHRDIKP NLL+ + ++KIADFG S S ++ GT Y+ PE +
Sbjct: 126 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRR--DTLCGTLDYLPPEMIE-- 180
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+WS G PF + + + + F P + +GA
Sbjct: 181 ---GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA-- 234
Query: 287 EFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 235 --RDLISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 11/265 (4%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVF-REMEILRRTDSPFIVQCFGI 117
LG G V + H+ T +A K+++ Q RE I R+ P IV+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
++ S ++ + + G L + +SE +H QIL+ ++Y H + I+HR++K
Sbjct: 74 IQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 132
Query: 178 PSNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
P NLL+ + VK+ADFG++ I +A + + GT Y+SPE D
Sbjct: 133 PENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSPEVLKKD-----PYSK 186
Query: 236 XXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECC 295
DIW+ G+ PF Q +A + A + P D +PE +S I+
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK-AGAYDYPSPEWDTVTPEAKSLIDSM 245
Query: 296 LQKEFSKRWTASQLLTHPFLCKNRR 320
L KR TA Q L P++C R
Sbjct: 246 LTVNPKKRITADQALKVPWICNRER 270
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 11/265 (4%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVF-REMEILRRTDSPFIVQCFGI 117
LG G V + H+ T +A K+++ Q RE I R+ P IV+
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
++ S ++ + + G L + +SE +H QIL+ ++Y H + I+HR++K
Sbjct: 73 IQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 131
Query: 178 PSNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
P NLL+ + VK+ADFG++ I +A + + GT Y+SPE D
Sbjct: 132 PENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSPEVLKKD-----PYSK 185
Query: 236 XXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECC 295
DIW+ G+ PF Q +A + A + P D +PE +S I+
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK-AGAYDYPSPEWDTVTPEAKSLIDSM 244
Query: 296 LQKEFSKRWTASQLLTHPFLCKNRR 320
L KR TA Q L P++C R
Sbjct: 245 LTVNPKKRITADQALKVPWICNRER 269
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 120/274 (43%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + I ALKV+ V Q+ RE+EI
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 63 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 121
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 122 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 176
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 177 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 230
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 231 ----RDLISRLLKHNPSQRPMLREVLEHPWITAN 260
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 35/284 (12%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR-QVFREMEILRRTDSPFIV 112
++++ LG G G V + + TH A+K++ + T ++ E+ +L+ D P I+
Sbjct: 40 QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIM 99
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
+ + FE + ++ME G L + F+E A I Q+L G++YLH H I+
Sbjct: 100 KLYDFFEDKR-NYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 173 HRDIKPSNLLVNNNNMQ--VKIADFGVSKIMCRSLDACNSYVGTCAYMSPE----RFDPD 226
HRD+KP NLL+ + +KI DFG+S + + +GT Y++PE ++D
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERLGTAYYIAPEVLRKKYDE- 216
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATL----MCAICFGDPP--SL 280
D+WS G+ PF G + D L F P ++
Sbjct: 217 ---------KCDVWSIGVILFILLAGYPPF---GGQTDQEILRKVEKGKYTFDSPEWKNV 264
Query: 281 PDGASPEFRSFIECCLQKEFSKRWTASQLLTHPF---LCKNRRS 321
+GA + I+ LQ + +R +A Q L HP+ +C + S
Sbjct: 265 SEGA----KDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKES 304
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 17/265 (6%)
Query: 64 GGTVYKVQHRCTHKI----YALKVVHGDADPTVR--RQVFREMEILRRTDSPFIVQCFGI 117
G + V RC HK +A K+++ + R +++ RE I R+ P IV+
Sbjct: 38 GKGAFSVVRRCVHKTTGLEFAAKIIN-TKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
++ S ++ + + G L + +SE +H QIL+ ++Y H + I+HR++K
Sbjct: 97 IQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 155
Query: 178 PSNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
P NLL+ + VK+ADFG++ I +A + + GT Y+SPE D
Sbjct: 156 PENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSPEVLKKD-----PYSK 209
Query: 236 XXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECC 295
DIW+ G+ PF Q +A + + P D +PE +S I+
Sbjct: 210 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG-AYDYPSPEWDTVTPEAKSLIDSM 268
Query: 296 LQKEFSKRWTASQLLTHPFLCKNRR 320
L KR TA Q L P++C R
Sbjct: 269 LTVNPKKRITADQALKVPWICNRER 293
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 124/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY G + L K F E + A +++ LSY
Sbjct: 71 RHPNILRLYGYFHDAT-RVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIADFG V R C GT Y+ PE +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 184
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 185 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 239 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 275
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ +G G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +K+ADFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 20/274 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 69 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIA+FG V R C GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAG-ELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 182
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 183 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
R I L+ S+R ++L HP++ N
Sbjct: 237 ----RDLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 20/268 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR-----QVFREMEILRRTDSPFIVQ 113
LG G V K + + T YA K + RR ++ RE+ ILR+ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + SE + QIL G++YLH KI H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE--RFDPDXX 228
D+KP N+++ + N+ +K+ DFG++ + ++ N + GT +++PE ++P
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIVNYEP--- 194
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEF 288
D+WS G PFL ++ A + ++ + S
Sbjct: 195 ----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSELA 249
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLC 316
+ FI L KE KR T + L HP++
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 14/263 (5%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT--VRRQVFREMEILRRTDSPFIVQCF 115
LG G G V +H T A+K+++ + V ++ RE++ L+ P I++ +
Sbjct: 23 TLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLY 82
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+ PS DI ++MEY+ G L + KNG E + + QIL G+ Y H H ++HRD
Sbjct: 83 QVISTPS-DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRD 141
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
+KP N+L+ + +M KIADFG+S +M + G+ Y +PE
Sbjct: 142 LKPENVLL-DAHMNAKIADFGLSNMMSDG-EFLRXSCGSPNYAAPEVI----SGRLYAGP 195
Query: 236 XXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECC 295
DIWS G PF P +C F P L +P S ++
Sbjct: 196 EVDIWSSGVILYALLCGTLPF-DDDHVPTLFKKICDGIFYTPQYL----NPSVISLLKHM 250
Query: 296 LQKEFSKRWTASQLLTHPFLCKN 318
LQ + KR T + H + ++
Sbjct: 251 LQVDPMKRATIKDIREHEWFKQD 273
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 20/268 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR-----QVFREMEILRRTDSPFIVQ 113
LG G V K + + T YA K + RR ++ RE+ ILR+ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + SE + QIL G++YLH KI H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE--RFDPDXX 228
D+KP N+++ + N+ +K+ DFG++ + ++ N + GT +++PE ++P
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIVNYEP--- 194
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEF 288
D+WS G PFL ++ A + ++ + S
Sbjct: 195 ----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSELA 249
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLC 316
+ FI L KE KR T + L HP++
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR-----QVFREMEILRRTDSPFIVQ 113
LG G V K + + T K YA K + + RR ++ RE+ ILR P I+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
IFE + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 80 LHDIFENKT-DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 138
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++K+ DFG+ ++A N + + +PE P+
Sbjct: 139 FDLKPENIMLLDKNVPNPRIKLIDFGI----AHKIEAGNEF--KNIFGTPEFVAPEIVNY 192
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ + T + A+ + S +
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGETKQ-ETLTNISAVNYDFDEEYFSNTSELAKD 251
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ +R +Q L H ++
Sbjct: 252 FIRRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H+ T YA+K++ D V+ E IL+ +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 94 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 153 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 202
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 255
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 256 SDLKDLLRNLLQVDLTKRF 274
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 125/281 (44%), Gaps = 22/281 (7%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY GT+ L K F E + A +++ LSY
Sbjct: 68 RHPNILRLYGYFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFD 224
H ++IHRDIKP NLL+ + ++KIA+FG V R C GT Y+ PE +
Sbjct: 127 HSKRVIHRDIKPENLLLGSAG-ELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIE 181
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
D+WS G PF + + + + F P + +GA
Sbjct: 182 -----GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA 235
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 236 ----RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 272
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H+ T YA+K++ D V+ E IL+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 102 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H+ T YA+K++ D V+ E IL+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 102 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H+ T YA+K++ D V+ E IL+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 102 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 17/268 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQV-FREMEILRRTDSPFIVQCFGI 117
+G G+ G V + + + + A+K++ D RR++ F E+ I+R +V+ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM--DLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
+ ++ +LME++ G L ++++ +E ++A + +L+ L+YLH +IHRDIK
Sbjct: 111 Y-LVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 178 PSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXX 237
++L+ + +VK++DFG + + + VGT +M+PE
Sbjct: 169 SDSILLTLDG-RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPE-----VISRSLYATEV 222
Query: 238 DIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDG--ASPEFRSFIECC 295
DIWS G P+ P A M + PP L + SP R F+E
Sbjct: 223 DIWSLGIMVIEMVDGEPPYF--SDSPVQA--MKRLRDSPPPKLKNSHKVSPVLRDFLERM 278
Query: 296 LQKEFSKRWTASQLLTHPFLCKNRRSDC 323
L ++ +R TA +LL HPFL + +C
Sbjct: 279 LVRDPQERATAQELLDHPFLLQTGLPEC 306
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 10/267 (3%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
VLG G V + + T K+ A+K + +A + E+ +L + P IV I
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
+E G + ++M+ + G L + + G ++E + + Q+L + YLH I+HRD+K
Sbjct: 85 YES-GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLK 143
Query: 178 PSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
P NLL + + ++ I+DFG+SK M ++ GT Y++PE
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-----AQKPYSK 197
Query: 236 XXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECC 295
D WS G+ PF + ++ A D P D S + FI
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW-DDISDSAKDFIRHL 256
Query: 296 LQKEFSKRWTASQLLTHPFLCKNRRSD 322
++K+ KR+T Q L HP++ + D
Sbjct: 257 MEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 20/268 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR-----QVFREMEILRRTDSPFIVQ 113
LG G V K + + T YA K + RR ++ RE+ ILR+ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + SE + QIL G++YLH KI H
Sbjct: 80 LHDVYENRT-DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE--RFDPDXX 228
D+KP N+++ + N+ +K+ DFG++ + ++ N + GT +++PE ++P
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIVNYEP--- 194
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEF 288
D+WS G PFL ++ A + ++ + S
Sbjct: 195 ----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSELA 249
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLC 316
+ FI L KE KR T + L HP++
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H+ T YA+K++ D V+ E IL+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY G + + L + G FSEP A+QI+ YLH
Sbjct: 102 PFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NL+++ +K+ DFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H+ T YA+K++ D V+ E IL+ +
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 122 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 181 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 230
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSGK-VRFPSHFS 283
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 284 SDLKDLLRNLLQVDLTKRF 302
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 123/277 (44%), Gaps = 23/277 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ +D + L++LG G G V V+ + T + YA+K++ + A V V E +L+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQ 60
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
T PF+ F+ + +MEY + G L L++ F+E + ++I+ L
Sbjct: 61 NTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
YLH +++RDIK NL+++ + +KI DFG+ K ++ GT Y++PE +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPDG 283
+ D W G PF Q +R LM I F P
Sbjct: 179 DN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF------PRT 227
Query: 284 ASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFL 315
SPE +S + L+K+ +R A +++ H F
Sbjct: 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 21/272 (7%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQ--VFREMEILRRTDSPFI 111
++++ LG G G V + + T A+K++ + T + E+ +L++ D P I
Sbjct: 24 QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 83
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
++ + FE + ++ME G L + FSE A I Q+L G +YLH H I
Sbjct: 84 MKLYEFFEDKR-NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNI 142
Query: 172 IHRDIKPSNLLVNNNNMQ--VKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+HRD+KP NLL+ + + +KI DFG+S +GT Y++PE
Sbjct: 143 VHRDLKPENLLLESKSRDALIKIVDFGLSA-HFEVGGKMKERLGTAYYIAPEVL------ 195
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATL----MCAICFGDPPSLPDGAS 285
D+WS G+ PF G + D L F DPP S
Sbjct: 196 RKKYDEKCDVWSCGVILYILLCGYPPF---GGQTDQEILKRVEKGKFSF-DPPDWTQ-VS 250
Query: 286 PEFRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
E + ++ L E SKR +A + L HP++ K
Sbjct: 251 DEAKQLVKLMLTYEPSKRISAEEALNHPWIVK 282
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 23/278 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ +D + L++LG G G V V+ + T + YA+K++ + A V V E +L+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQ 60
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
T PF+ F+ + +MEY + G L L++ F+E + ++I+ L
Sbjct: 61 NTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
YLH +++RDIK NL+++ + +KI DFG+ K ++ GT Y++PE +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPDG 283
+ D W G PF Q +R LM I F P
Sbjct: 179 DN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF------PRT 227
Query: 284 ASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLC 316
SPE +S + L+K+ +R A +++ H F
Sbjct: 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 124/276 (44%), Gaps = 29/276 (10%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQ--VFREMEILRRTDSPFI 111
++++ LG G G V + + T A+K++ + T + E+ +L++ D P I
Sbjct: 7 QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 66
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
++ + FE + ++ME G L + FSE A I Q+L G +YLH H I
Sbjct: 67 MKLYEFFEDKR-NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNI 125
Query: 172 IHRDIKPSNLLVNNNNMQ--VKIADFGVSKIMCRSLDACNSYVGTCAYMSPE----RFDP 225
+HRD+KP NLL+ + + +KI DFG+S +GT Y++PE ++D
Sbjct: 126 VHRDLKPENLLLESKSRDALIKIVDFGLS-AHFEVGGKMKERLGTAYYIAPEVLRKKYDE 184
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATL----MCAICFGDPPSLP 281
D+WS G+ PF G + D L F DPP
Sbjct: 185 ----------KCDVWSCGVILYILLCGYPPF---GGQTDQEILKRVEKGKFSF-DPPDWT 230
Query: 282 DGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
S E + ++ L E SKR +A + L HP++ K
Sbjct: 231 Q-VSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVK 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 11/261 (4%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVF-REMEILRRTDSPFIVQCFGI 117
LG G V + H+ T +A K+++ Q RE I R+ P IV+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
++ S ++ + + G L + +SE +H QIL+ ++Y H + I+HR++K
Sbjct: 74 IQEESFHY-LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 132
Query: 178 PSNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
P NLL+ + VK+ADFG++ I +A + + GT Y+SPE D
Sbjct: 133 PENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSPEVLKKD-----PYSK 186
Query: 236 XXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECC 295
DIW+ G+ PF Q +A + + P D +PE +S I+
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG-AYDYPSPEWDTVTPEAKSLIDSM 245
Query: 296 LQKEFSKRWTASQLLTHPFLC 316
L KR TA Q L P++C
Sbjct: 246 LTVNPKKRITADQALKVPWIC 266
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 23/278 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ +D + L++LG G G V V+ + T + YA+K++ + A V V E +L+
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQ 63
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
T PF+ F+ + +MEY + G L L++ F+E + ++I+ L
Sbjct: 64 NTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 122
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
YLH +++RDIK NL+++ + +KI DFG+ K ++ GT Y++PE +
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 181
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPDG 283
+ D W G PF Q +R LM I F P
Sbjct: 182 DN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF------PRT 230
Query: 284 ASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLC 316
SPE +S + L+K+ +R A +++ H F
Sbjct: 231 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 268
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 10/267 (3%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
VLG G V + + T K+ A+K + +A + E+ +L + P IV I
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
+E G + ++M+ + G L + + G ++E + + Q+L + YLH I+HRD+K
Sbjct: 85 YES-GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLK 143
Query: 178 PSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
P NLL + + ++ I+DFG+SK M ++ GT Y++PE
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-----AQKPYSK 197
Query: 236 XXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECC 295
D WS G+ PF + ++ A D P D S + FI
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW-DDISDSAKDFIRHL 256
Query: 296 LQKEFSKRWTASQLLTHPFLCKNRRSD 322
++K+ KR+T Q L HP++ + D
Sbjct: 257 MEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVV----HGDADPTVRRQVFREMEILRRTDSP 109
EKL LG G TVYK + + T++I A+K + +A + R RE+++L+ P
Sbjct: 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 72
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQIL---KGLSYL 166
I+ F S +I+++ ++M++ L+ ++ N P +HI + +L +GL YL
Sbjct: 73 NIIGLLDAFGHKS-NISLVFDFMET-DLEVIIKDNSLVLTP--SHIKAYMLMTLQGLEYL 128
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
H H I+HRD+KP+NLL++ N + +K+ADFG++K A V T Y +PE
Sbjct: 129 HQHWILHRDLKPNNLLLDENGV-LKLADFGLAKSFGSPNRAYXHQVVTRWYRAPE 182
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 17/270 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQV-FREMEILRRTDSP 109
S L+ +G G+ G V R + K+ A+K + D RR++ F E+ I+R
Sbjct: 29 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 86
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ + + ++ ++ME+++ G L ++ + +E ++A + +L+ LS LH
Sbjct: 87 NVVEMYNSYLV-GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQ 144
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+IHRDIK ++L+ ++ +VK++DFG + + + VGT +M+PE
Sbjct: 145 GVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS----- 198
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPD--GASPE 287
DIWS G P+ + P A M I PP L + SP
Sbjct: 199 RLPYGPEVDIWSLGIMVIEMVDGEPPYF--NEPPLKA--MKMIRDNLPPRLKNLHKVSPS 254
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
+ F++ L ++ ++R TA++LL HPFL K
Sbjct: 255 LKGFLDRLLVRDPAQRATAAELLKHPFLAK 284
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 123/268 (45%), Gaps = 18/268 (6%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQC 114
++VLG G V+ V+ R T K++ALK + P R E+ +L++ IV
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCI--KKSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
I+E + ++M+ + G L + + G ++E + + Q+L + YLH + I+HR
Sbjct: 72 EDIYESTT-HYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHR 130
Query: 175 DIKPSNL--LVNNNNMQVKIADFGVSKIMCRSL--DACNSYVGTCAYMSPERFDPDXXXX 230
D+KP NL L N ++ I DFG+SK+ + AC GT Y++PE
Sbjct: 131 DLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC----GTPGYVAPEVL-----AQ 181
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D WS G+ PF + + + + + P D S +
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESP-FWDDISESAKD 240
Query: 291 FIECCLQKEFSKRWTASQLLTHPFLCKN 318
FI L+K+ ++R+T + L+HP++ N
Sbjct: 241 FICHLLEKDPNERYTCEKALSHPWIDGN 268
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 10/267 (3%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
VLG G V + + T K+ A+K + +A + E+ +L + P IV I
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
+E G + ++M+ + G L + + G ++E + + Q+L + YLH I+HRD+K
Sbjct: 85 YE-SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLK 143
Query: 178 PSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
P NLL + + ++ I+DFG+SK M ++ GT Y++PE
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-----AQKPYSK 197
Query: 236 XXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECC 295
D WS G+ PF + ++ A D P D S + FI
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW-DDISDSAKDFIRHL 256
Query: 296 LQKEFSKRWTASQLLTHPFLCKNRRSD 322
++K+ KR+T Q L HP++ + D
Sbjct: 257 MEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 17/270 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQV-FREMEILRRTDSP 109
S L+ +G G+ G V R + K+ A+K + D RR++ F E+ I+R
Sbjct: 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 131
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ + + ++ ++ME+++ G L ++ +E ++A + +L+ LS LH
Sbjct: 132 NVVEMYNSYLV-GDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQ 189
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+IHRDIK ++L+ ++ +VK++DFG + + + VGT +M+PE
Sbjct: 190 GVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS----- 243
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPD--GASPE 287
DIWS G P+ + P A M I PP L + SP
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDGEPPYFN--EPPLKA--MKMIRDNLPPRLKNLHKVSPS 299
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
+ F++ L ++ ++R TA++LL HPFL K
Sbjct: 300 LKGFLDRLLVRDPAQRATAAELLKHPFLAK 329
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 17/270 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQV-FREMEILRRTDSP 109
S L+ +G G+ G V R + K+ A+K + D RR++ F E+ I+R
Sbjct: 31 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 88
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ + + ++ ++ME+++ G L ++ + +E ++A + +L+ LS LH
Sbjct: 89 NVVEMYNSYLV-GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQ 146
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+IHRDIK ++L+ ++ +VK++DFG + + + VGT +M+PE
Sbjct: 147 GVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS----- 200
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPD--GASPE 287
DIWS G P+ + P A M I PP L + SP
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGEPPYF--NEPPLKA--MKMIRDNLPPRLKNLHKVSPS 256
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
+ F++ L ++ ++R TA++LL HPFL K
Sbjct: 257 LKGFLDRLLVRDPAQRATAAELLKHPFLAK 286
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 123/279 (44%), Gaps = 18/279 (6%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
A D E + LG G G VY + + + I ALKV+ V Q+ RE+EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
P I++ +G F + + +++EY G + L K F E + A +++ LSY
Sbjct: 71 RHPNILRLYGYFHDAT-RVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
H ++IHRDIKP NLL+ + ++KIADFG S S GT Y+ PE +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAG-ELKIADFGWSVHAPSSRRX--XLXGTLDYLPPEMIE-- 184
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
D+WS G PF + + + + F P + +GA
Sbjct: 185 ---GRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISRVEFTFPDFVTEGA-- 238
Query: 287 EFRSFIECCLQKEFSKRWTASQLLTHPFLCKN--RRSDC 323
R I L+ S+R ++L HP++ N + S+C
Sbjct: 239 --RDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNC 275
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 17/270 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQV-FREMEILRRTDSP 109
S L+ +G G+ G V R + K+ A+K + D RR++ F E+ I+R
Sbjct: 24 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 81
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ + + ++ ++ME+++ G L ++ + +E ++A + +L+ LS LH
Sbjct: 82 NVVEMYNSYLV-GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQ 139
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+IHRDIK ++L+ ++ +VK++DFG + + + VGT +M+PE
Sbjct: 140 GVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS----- 193
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPD--GASPE 287
DIWS G P+ + P A M I PP L + SP
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGEPPYFN--EPPLKA--MKMIRDNLPPRLKNLHKVSPS 249
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
+ F++ L ++ ++R TA++LL HPFL K
Sbjct: 250 LKGFLDRLLVRDPAQRATAAELLKHPFLAK 279
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 12/222 (5%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR--QVFREMEILRRTDSP 109
D + L+ LG G+ G V+ ++ R + YA+KV+ + +++ E +L P
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
FI++ +G F+ + I ++M+Y++ G L +LL K+ F P A+++ L YLH
Sbjct: 67 FIIRMWGTFQD-AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 125
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
II+RD+KP N+L++ N +KI DFG +K + D GT Y++PE
Sbjct: 126 DIIYRDLKPENILLDKNG-HIKITDFGFAKYVP---DVTYXLCGTPDYIAPE-----VVS 176
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCA 271
D WS G+ PF + ++ A
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA 218
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 15/270 (5%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSP 109
D + +LG G+ VY+ + T A+K++ A + ++V E++I + P
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHG 168
I++ + FE S + +++E +G ++ L N+ FSE + H QI+ G+ YLH
Sbjct: 72 SILELYNYFED-SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXX 228
H I+HRD+ SNLL+ NM +KIADFG++ + + + GT Y+SPE
Sbjct: 131 HGILHRDLTLSNLLL-TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE-----IA 184
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEF 288
D+WS G PF + ++ A +P S E
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA-----DYEMPSFLSIEA 239
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
+ I L++ + R + S +L HPF+ +N
Sbjct: 240 KDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NL+++ +K+ DFG++K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLMIDQQGY-IKVTDFGLAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 17/270 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQV-FREMEILRRTDSP 109
S L+ +G G+ G V R + K+ A+K + D RR++ F E+ I+R
Sbjct: 20 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 77
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ + + ++ ++ME+++ G L ++ + +E ++A + +L+ LS LH
Sbjct: 78 NVVEMYNSYLV-GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQ 135
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+IHRDIK ++L+ ++ +VK++DFG + + + VGT +M+PE
Sbjct: 136 GVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS----- 189
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPD--GASPE 287
DIWS G P+ + P A M I PP L + SP
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPPYFN--EPPLKA--MKMIRDNLPPRLKNLHKVSPS 245
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
+ F++ L ++ ++R TA++LL HPFL K
Sbjct: 246 LKGFLDRLLVRDPAQRATAAELLKHPFLAK 275
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 102 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWTLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 23/278 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ +D + L++LG G G V V+ + T + YA+K++ + A V V E +L+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQ 60
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
T PF+ F+ + +MEY + G L L++ F+E + ++I+ L
Sbjct: 61 NTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
YLH +++RDIK NL+++ + +KI DFG+ K + GT Y++PE +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPDG 283
+ D W G PF Q +R LM I F P
Sbjct: 179 DN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF------PRT 227
Query: 284 ASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLC 316
SPE +S + L+K+ +R A +++ H F
Sbjct: 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 23/278 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ +D + L++LG G G V V+ + T + YA+K++ + A V V E +L+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQ 60
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
T PF+ F+ + +MEY + G L L++ F+E + ++I+ L
Sbjct: 61 NTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
YLH +++RDIK NL+++ + +KI DFG+ K + GT Y++PE +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPDG 283
+ D W G PF Q +R LM I F P
Sbjct: 179 DN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF------PRT 227
Query: 284 ASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLC 316
SPE +S + L+K+ +R A +++ H F
Sbjct: 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 87 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 146 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWTLC----GTPEYLAPE-----I 195
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 248
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 249 SDLKDLLRNLLQVDLTKRF 267
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 23/278 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ +D + L++LG G G V V+ + T + YA+K++ + A V V E +L+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQ 60
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
T PF+ F+ + +MEY + G L L++ F+E + ++I+ L
Sbjct: 61 NTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 119
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
YLH +++RDIK NL+++ + +KI DFG+ K + GT Y++PE +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 178
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPDG 283
+ D W G PF Q +R LM I F P
Sbjct: 179 DN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF------PRT 227
Query: 284 ASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLC 316
SPE +S + L+K+ +R A +++ H F
Sbjct: 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 265
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H+ T +A+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEYSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 102 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H+ T YA+K++ D V+ E IL+ +
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G F EP A+QI+ YLH
Sbjct: 94 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 153 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 202
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 255
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 256 SDLKDLLRNLLQVDLTKRF 274
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 23/278 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ +D + L++LG G G V V+ + T + YA+K++ + A V V E +L+
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV-TESRVLQ 65
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
T PF+ F+ + +MEY + G L L++ F+E + ++I+ L
Sbjct: 66 NTRHPFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 124
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
YLH +++RDIK NL+++ + +KI DFG+ K + GT Y++PE +
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDG-HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLE 183
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPDG 283
+ D W G PF Q +R LM I F P
Sbjct: 184 DN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF------PRT 232
Query: 284 ASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLC 316
SPE +S + L+K+ +R A +++ H F
Sbjct: 233 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 270
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H+ T +A+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEYSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H+ T +A+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEYSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 20/265 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
LG G G V+ V+ R + +K ++ D Q+ E+E+L+ D P I++ F +F
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 119 EKPSGDIAILMEYMDSGTLDTLL----NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
E ++ I+ME + G L + + SE +A + Q++ L+Y H ++H+
Sbjct: 90 ED-YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHK 148
Query: 175 DIKPSNLLVNNNNMQ--VKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
D+KP N+L + + +KI DFG++++ +S + + GT YM+PE F D
Sbjct: 149 DLKPENILFQDTSPHSPIKIIDFGLAELF-KSDEHSTNAAGTALYMAPEVFKRD------ 201
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPD--GASPEFRS 290
DIWS G PF + + +P + +P+
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLPFTGTS----LEEVQQKATYKEPNYAVECRPLTPQAVD 257
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
++ L K+ +R +A+Q+L H +
Sbjct: 258 LLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 17/270 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQV-FREMEILRRTDSP 109
S L+ +G G+ G V R + K+ A+K + D RR++ F E+ I+R
Sbjct: 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHE 208
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ + + ++ ++ME+++ G L ++ + +E ++A + +L+ LS LH
Sbjct: 209 NVVEMYNSYLV-GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQ 266
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+IHRDIK ++L+ ++ +VK++DFG + + + VGT +M+PE
Sbjct: 267 GVIHRDIKSDSILLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS----- 320
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPD--GASPE 287
DIWS G P+ + P A M I PP L + SP
Sbjct: 321 RLPYGPEVDIWSLGIMVIEMVDGEPPYF--NEPPLKA--MKMIRDNLPPRLKNLHKVSPS 376
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
+ F++ L ++ ++R TA++LL HPFL K
Sbjct: 377 LKGFLDRLLVRDPAQRATAAELLKHPFLAK 406
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 118/277 (42%), Gaps = 29/277 (10%)
Query: 53 LEKLQVLGHGNGGTVY---KVQHRCTHKIYALKVVHG-----DADPTVRRQVFREMEILR 104
E L+VLG G G V+ KV T KI+A+KV+ +A T + E IL
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA--ERNILE 76
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
PFIV F+ G + +++EY+ G L L + G F E ++I L
Sbjct: 77 EVKHPFIVDLIYAFQT-GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG 135
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
+LH II+RD+KP N+++N+ VK+ DFG+ K +++ GT YM+PE
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQG-HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE--- 191
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW-ATLMCAICFGDPPSLPDG 283
D WS G PF ++ L C + +LP
Sbjct: 192 --ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL------NLPPY 243
Query: 284 ASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFL 315
+ E R ++ L++ + R A ++ HPF
Sbjct: 244 LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NL+++ +K+ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 121/271 (44%), Gaps = 16/271 (5%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSP 109
D E + LG G G VY + + +H I ALKV+ V Q+ RE+EI P
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
I++ + F I +++EY G L L K+ TF E + A I ++ L Y HG
Sbjct: 84 NILRLYNYFYD-RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
K+IHRDIKP N L+ ++KIADFG S + SL + GT Y+ PE +
Sbjct: 143 KVIHRDIKPEN-LLLGLKGELKIADFGWS-VHAPSLRR-KTMCGTLDYLPPEMIE----- 194
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFR 289
D+W G+ PF + ++ + P S+P GA +
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV-KVDLKFPASVPTGA----Q 249
Query: 290 SFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
I L+ S+R +Q+ HP++ N R
Sbjct: 250 DLISKLLRHNPSERLPLAQVSAHPWVRANSR 280
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H+ T YA+K++ D V+ E I + +
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ +++EY G + + L + G FSEP A+QI+ YLH
Sbjct: 102 PFLVKLEFSF-KDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +K+ADFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLLIDQQGY-IKVADFGFAKRVKGRTWXLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 10/267 (3%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
VLG G V + + T K+ A+K + A + E+ +L + P IV I
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
+E G + ++M+ + G L + + G ++E + + Q+L + YLH I+HRD+K
Sbjct: 85 YES-GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLK 143
Query: 178 PSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
P NLL + + ++ I+DFG+SK M ++ GT Y++PE
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-----AQKPYSK 197
Query: 236 XXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECC 295
D WS G+ PF + ++ A D P D S + FI
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD-ISDSAKDFIRHL 256
Query: 296 LQKEFSKRWTASQLLTHPFLCKNRRSD 322
++K+ KR+T Q L HP++ + D
Sbjct: 257 MEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 14/271 (5%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVF-REMEILRRTDSPF 110
D + + LG G V + + + YA K+++ Q RE I R P
Sbjct: 32 DYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 91
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
IV+ + G ++ + + G L + +SE +H QIL+ ++++H H
Sbjct: 92 IVRLHDSISE-EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 171 IIHRDIKPSNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE--RFDPD 226
I+HRD+KP NLL+ + VK+ADFG++ + A + GT Y+SPE R DP
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDP- 209
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASP 286
DIW+ G+ PF Q + + A + P D +P
Sbjct: 210 ------YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIK-AGAYDFPSPEWDTVTP 262
Query: 287 EFRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
E ++ I L +KR TA Q L HP++C+
Sbjct: 263 EAKNLINQMLTINPAKRITADQALKHPWVCQ 293
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 26/270 (9%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSY---VGTCAYMSPE--RFDP 225
D+KP N+++ + N+ ++KI DFG + +D N + GT A+++PE ++P
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNIFGTPAFVAPEIVNYEP 193
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D+WS G PFL ++ A + A+ + S
Sbjct: 194 -------LGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTS 245
Query: 286 PEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ FI L K+ KR T L HP++
Sbjct: 246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 102 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 88 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 147 LDLIYRDLKPENLLIDEQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 196
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 249
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 250 SDLKDLLRNLLQVDLTKRF 268
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 117/277 (42%), Gaps = 29/277 (10%)
Query: 53 LEKLQVLGHGNGGTVY---KVQHRCTHKIYALKVVHG-----DADPTVRRQVFREMEILR 104
E L+VLG G G V+ KV T KI+A+KV+ +A T + E IL
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA--ERNILE 76
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
PFIV F+ G + +++EY+ G L L + G F E ++I L
Sbjct: 77 EVKHPFIVDLIYAFQT-GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG 135
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
+LH II+RD+KP N+++N+ VK+ DFG+ K + + GT YM+PE
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQG-HVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE--- 191
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW-ATLMCAICFGDPPSLPDG 283
D WS G PF ++ L C + +LP
Sbjct: 192 --ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL------NLPPY 243
Query: 284 ASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFL 315
+ E R ++ L++ + R A ++ HPF
Sbjct: 244 LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NL+++ +++ DFG++K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLMIDQQGY-IQVTDFGLAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFEKPSGD-IAILMEYMDSGTLDTLLNKNGTFSEPKL 152
QV++E+ IL++ D P +V+ + + P+ D + ++ E ++ G + + SE +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQA 139
Query: 153 AHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYV 212
++KG+ YLH KIIHRDIKPSNLLV + +KIADFGVS S ++ V
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG-HIKIADFGVSNEFKGSDALLSNTV 198
Query: 213 GTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMC-- 270
GT A+M+PE D+W+ G PF+ +MC
Sbjct: 199 GTPAFMAPESL--SETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD-------ERIMCLH 249
Query: 271 ------AICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
A+ F D P + + + + I L K R ++ HP++ +
Sbjct: 250 SKIKSQALEFPDQPDIAE----DLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C +PE P+
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLCG---------TPEALAPEI 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 17/260 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQV-FREMEILRRTDSPFIVQCFGI 117
+G G+ G V + T K A+K + D RR++ F E+ I+R +V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
+ ++ ++ME+++ G L ++ +E ++A + +L+ LSYLH +IHRDIK
Sbjct: 111 Y-LVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 178 PSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXX 237
++L+ ++ ++K++DFG + + + VGT +M+PE
Sbjct: 169 SDSILLTSDG-RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVIS-----RLPYGTEV 222
Query: 238 DIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPD--GASPEFRSFIECC 295
DIWS G P+ + P A M I PP + D S R F++
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFN--EPPLQA--MRRIRDSLPPRVKDLHKVSSVLRGFLDLM 278
Query: 296 LQKEFSKRWTASQLLTHPFL 315
L +E S+R TA +LL HPFL
Sbjct: 279 LVREPSQRATAQELLGHPFL 298
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 25/258 (9%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 122 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXX 228
+I+RD+KP NLL++ +++ DFG +K R A + GT Y++PE
Sbjct: 181 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK---RVKGATWTLCGTPEYLAPE-----II 231
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGASP 286
D W+ G+ PF QP Q + I G P S
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFSS 284
Query: 287 EFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 285 DLKDLLRNLLQVDLTKRF 302
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NL+++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLMIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRR 105
+ + E L+ +G G+ G V VQ T K+YA+K ++ + R VF+E++I++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 106 TDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
+ PF+V + F+ D+ ++++ + G L L +N F E + +++ L Y
Sbjct: 72 LEHPFLVNLWYSFQDEE-DMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDY 130
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
L +IIHRD+KP N+L++ + V I DF ++ ++ R + GT YM+PE F
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHG-HVHITDFNIAAMLPRET-QITTMAGTKPYMAPEMF 186
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G F EP A+QI+ YLH
Sbjct: 102 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G F EP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G F EP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+ + F K + ++ ++MEY G + + L + G FSEP A+QI+ YLH
Sbjct: 102 PFLTKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NL+++ +K+ DFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+ + F K + ++ ++MEY G + + L + G FSEP A+QI+ YLH
Sbjct: 102 PFLTKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NL+++ +K+ DFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEFKNI--FGTPEFVAPEIVNY 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 250
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY G + + L + G F EP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NL+++ +K+ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NL+++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLIIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 18/263 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSPFIVQC 114
++LG G V+ + H+ A+KV+ D DP+ + RE + + P IV
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 115 F--GIFEKPSGDIA-ILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
+ G E P+G + I+MEY+D TL +++ G + + + + + L++ H + I
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACN---SYVGTCAYMSPERFDPDXX 228
IHRD+KP+N++++ N VK+ DFG+++ + S ++ + +GT Y+SPE+ D
Sbjct: 138 IHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD-- 194
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLP-DGASPE 287
D++S G PF G PD PPS +G S +
Sbjct: 195 ---SVDARSDVYSLGCVLYEVLTGEPPFT--GDSPDSVAYQHVREDPIPPSARHEGLSAD 249
Query: 288 FRSFIECCLQKEFSKRW-TASQL 309
+ + L K R+ TA+++
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEM 272
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKD 250
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 23/257 (8%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPE 287
D W+ G+ PF D + P S +
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFF-----ADEPIQIYEKIVSGKVRFPSHFSSD 264
Query: 288 FRSFIECCLQKEFSKRW 304
+ + LQ + +KR+
Sbjct: 265 LKDLLRNLLQVDLTKRF 281
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G F+EP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 250
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 250
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 250
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVRRQVFREMEILRRTDSPFIV 112
EK+ +G G+ G V+K ++R T +I A+K + + DP +++ RE+ +L++ P +V
Sbjct: 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLV 65
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
+F + + ++ EY D L L E + I Q L+ +++ H H I
Sbjct: 66 NLLEVFRR-KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI 124
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
HRD+KP N+L+ +++ +K+ DFG ++++ D + V T Y SPE
Sbjct: 125 HRDVKPENILITKHSV-IKLCDFGFARLLTGPSDYYDDEVATRWYRSPE 172
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 250
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 114/273 (41%), Gaps = 20/273 (7%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSP 109
D + ++ LG G G VY + + I ALKV+ V Q+ RE+EI P
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
I++ + F I +++E+ G L L K+G F E + A ++ L Y H
Sbjct: 75 NILRMYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
K+IHRDIKP NLL+ ++KIADFG V R C GT Y+ PE +
Sbjct: 134 KVIHRDIKPENLLMGYKG-ELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIE--- 185
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPE 287
D+W G PF P + + + PP L DG+
Sbjct: 186 --GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-TETHRRIVNVDLKFPPFLSDGS--- 239
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
+ I L+ +R ++ HP++ N R
Sbjct: 240 -KDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G F EP A+QI+ YLH
Sbjct: 96 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 155 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 204
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 257
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 258 SDLKDLLRNLLQVDLTKRF 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 78 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 136
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 137 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 190
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 249
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 250 FIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 250
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 78 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 136
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 137 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 190
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 249
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 250 FIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 250
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 250
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPE 221
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE 208
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G F EP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G F EP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G F EP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 117/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C +PE P
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLCG---------TPEYLAPAI 209
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 262
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 263 SDLKDLLRNLLQVDLTKRF 281
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G F EP A+QI+ YLH
Sbjct: 122 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NLL++ +++ DFG +K + R+ C GT Y++PE
Sbjct: 181 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 230
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 283
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 284 SDLKDLLRNLLQVDLTKRF 302
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 115/275 (41%), Gaps = 13/275 (4%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDAD-------PTVRRQVFREMEI 102
Y + V+G G V + HR T +A+K++ A+ VR RE I
Sbjct: 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHI 152
Query: 103 LRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILK 161
LR+ P I+ +E S + ++ + M G L L + SE + I +L+
Sbjct: 153 LRQVAGHPHIITLIDSYES-SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLE 211
Query: 162 GLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
+S+LH + I+HRD+KP N+L+ ++NMQ++++DFG S + GT Y++PE
Sbjct: 212 AVSFLHANNIVHRDLKPENILL-DDNMQIRLSDFGFS-CHLEPGEKLRELCGTPGYLAPE 269
Query: 222 RFDPDXXXXX-XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSL 280
D+W+ G PF Q +M P
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW 329
Query: 281 PDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
D +S + I LQ + R TA Q L HPF
Sbjct: 330 DDRSST-VKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 24/265 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRT 106
I + DL + +G G+ GTV++ + + A+K++ D + RE+ I++R
Sbjct: 34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT---FSEPKLAHIASQILKGL 163
P IV G +P +++I+ EY+ G+L LL+K+G E + +A + KG+
Sbjct: 92 RHPNIVLFMGAVTQPP-NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 164 SYLHGHK--IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
+YLH I+HR++K NLLV+ VK+ DFG+S++ + + S GT +M+PE
Sbjct: 151 NYLHNRNPPIVHRNLKSPNLLVDKK-YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPE 209
Query: 222 --RFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFG-DPP 278
R +P +W QP + A ++ A+ F
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELAT-----------LQQPWGNLNPAQVVAAVGFKCKRL 258
Query: 279 SLPDGASPEFRSFIECCLQKEFSKR 303
+P +P+ + IE C E KR
Sbjct: 259 EIPRNLNPQVAAIIEGCWTNEPWKR 283
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 8/202 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSPFIVQC 114
L+ +G GN V +H T + A+K++ +PT +++FRE+ I++ + P IV+
Sbjct: 17 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
F + E + ++MEY G + L +G E + QI+ + Y H +I+HR
Sbjct: 77 FEVIETEK-TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHR 135
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NLL+ + +M +KIADFG S +++ G+ Y +PE F
Sbjct: 136 DLKAENLLL-DADMNIKIADFGFSNEFTVG-GKLDTFCGSPPYAAPELFQ----GKKYDG 189
Query: 235 XXXDIWSXXXXXXXXXXGHFPF 256
D+WS G PF
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPF 211
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 25/258 (9%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXX 228
+I+RD+KP NLL++ +++ DFG +K R GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK---RVKGRTWXLAGTPEYLAPE-----II 210
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGASP 286
D W+ G+ PF QP Q + I G P S
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFSS 263
Query: 287 EFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 DLKDLLRNLLQVDLTKRF 281
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTDSPFIV 112
EKL+ +G G GTV+K ++R TH+I ALK V D D V RE+ +L+ IV
Sbjct: 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
+ + + ++ E+ D + NG + Q+LKGL + H ++
Sbjct: 65 RLHDVLHS-DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
HRD+KP NLL+N N ++K+ADFG+++ + ++ V T Y P+
Sbjct: 124 HRDLKPQNLLINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPD 171
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 120/277 (43%), Gaps = 16/277 (5%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV--------HGDADPTVRRQVFREME 101
Y + E ++LG G V + H+ T K YA+K++ + +R +E++
Sbjct: 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 102 ILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQIL 160
ILR+ P I+Q +E + ++ + M G L L + T SE + I +L
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTF-FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
+ + LH I+HRD+KP N+L+ +++M +K+ DFG S + S GT +Y++P
Sbjct: 135 EVICALHKLNIVHRDLKPENILL-DDDMNIKLTDFGFS-CQLDPGEKLRSVCGTPSYLAP 192
Query: 221 ERFDPDXXXXX-XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCA-ICFGDPP 278
E + D+WS G PF Q +M FG P
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 279 SLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
D S + + L + KR+TA + L HPF
Sbjct: 253 W--DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSPFIVQC 114
L+ +G GN V +H T + A+K++ +PT +++FRE+ I++ + P IV+
Sbjct: 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
F + E + ++MEY G + L +G E + QI+ + Y H +I+HR
Sbjct: 80 FEVIETEK-TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHR 138
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSK--IMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
D+K NLL+ + +M +KIADFG S + LDA + G Y +PE F
Sbjct: 139 DLKAENLLL-DADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQ----GKKY 190
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPF 256
D+WS G PF
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 27/259 (10%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
E+++ LG G+ G V V+H T YA+K++ D V+ E IL+ +
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+ + F K + ++ ++MEY G + + L + G F EP A+QI+ YLH
Sbjct: 102 PFLTKLEFSF-KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAYMSPERFDPDX 227
+I+RD+KP NL+++ +K+ DFG +K + R+ C GT Y++PE
Sbjct: 161 LDLIYRDLKPENLMIDQQGY-IKVTDFGFAKRVKGRTWXLC----GTPEYLAPE-----I 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGAS 285
D W+ G+ PF QP Q + I G P S
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFS 263
Query: 286 PEFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 SDLKDLLRNLLQVDLTKRF 282
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQ----VFREMEILRRT 106
D E ++V+G G G V V+H+ T K+YA+K++ ++R + E +I+
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS--KFEMIKRSDSAFFWEERDIMAFA 126
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
+SP++VQ F F+ + ++MEYM G L L++ N E ++++ L +
Sbjct: 127 NSPWVVQLFYAFQDDRY-LYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLALDAI 184
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGV-SKIMCRSLDACNSYVGTCAYMSPE 221
H IHRD+KP N+L++ + +K+ADFG K+ + C++ VGT Y+SPE
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSG-HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 239
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQ----VFREMEILRRT 106
D E ++V+G G G V V+H+ T K+YA+K++ ++R + E +I+
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS--KFEMIKRSDSAFFWEERDIMAFA 131
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
+SP++VQ F F+ + ++MEYM G L L++ N E ++++ L +
Sbjct: 132 NSPWVVQLFYAFQDDRY-LYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLALDAI 189
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGV-SKIMCRSLDACNSYVGTCAYMSPE 221
H IHRD+KP N+L++ + +K+ADFG K+ + C++ VGT Y+SPE
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSG-HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 244
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 25/258 (9%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR----RQVFREMEILRRTDS 108
++++ LG G+ G V V+H+ + YA+K++ D V+ E IL+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL--DKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
PF+V+ F K + ++ ++MEY+ G + + L + G FSEP A+QI+ YLH
Sbjct: 101 PFLVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXX 228
+I+RD+KP NLL++ +++ DFG +K R GT Y++PE
Sbjct: 160 LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK---RVKGRTWXLXGTPEYLAPE-----II 210
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFL--QPGQRPDWATLMCAICFGDPPSLPDGASP 286
D W+ G+ PF QP Q + I G P S
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ------IYEKIVSG-KVRFPSHFSS 263
Query: 287 EFRSFIECCLQKEFSKRW 304
+ + + LQ + +KR+
Sbjct: 264 DLKDLLRNLLQVDLTKRF 281
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 19/271 (7%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR--RQVFREMEILRRTDSPFIVQ 113
+VLG G G V+ Q + T K+YA K ++ + + E +IL + S FIV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLD----TLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
FE + D+ ++M M+ G + + N F EP+ +QI+ GL +LH
Sbjct: 250 LAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
II+RD+KP N+L++++ V+I+D G++ + Y GT +M+PE
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL-----L 362
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFR 289
D ++ PF G++ + L + + PD SP +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASK 421
Query: 290 SFIECCLQKEFSKRW-----TASQLLTHPFL 315
F E LQK+ KR + L THP
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ +++E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 250
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 19/271 (7%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR--RQVFREMEILRRTDSPFIVQ 113
+VLG G G V+ Q + T K+YA K ++ + + E +IL + S FIV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLD----TLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
FE + D+ ++M M+ G + + N F EP+ +QI+ GL +LH
Sbjct: 250 LAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
II+RD+KP N+L++++ V+I+D G++ + Y GT +M+PE
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL-----L 362
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFR 289
D ++ PF G++ + L + + PD SP +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASK 421
Query: 290 SFIECCLQKEFSKRW-----TASQLLTHPFL 315
F E LQK+ KR + L THP
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 19/271 (7%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR--RQVFREMEILRRTDSPFIVQ 113
+VLG G G V+ Q + T K+YA K ++ + + E +IL + S FIV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLD----TLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
FE + D+ ++M M+ G + + N F EP+ +QI+ GL +LH
Sbjct: 250 LAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
II+RD+KP N+L++++ V+I+D G++ + Y GT +M+PE
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE-----LLL 362
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFR 289
D ++ PF G++ + L + + PD SP +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASK 421
Query: 290 SFIECCLQKEFSKRW-----TASQLLTHPFL 315
F E LQK+ KR + L THP
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 19/271 (7%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR--RQVFREMEILRRTDSPFIVQ 113
+VLG G G V+ Q + T K+YA K ++ + + E +IL + S FIV
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLD----TLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
FE + D+ ++M M+ G + + N F EP+ +QI+ GL +LH
Sbjct: 250 LAYAFETKT-DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
II+RD+KP N+L++++ V+I+D G++ + Y GT +M+PE
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE-----LLL 362
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFR 289
D ++ PF G++ + L + + PD SP +
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVTYPDKFSPASK 421
Query: 290 SFIECCLQKEFSKRW-----TASQLLTHPFL 315
F E LQK+ KR + L THP
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 118/267 (44%), Gaps = 12/267 (4%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
+G GN G ++ + T ++ A+K + A + V RE+ R P IV+ +
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 119 EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKP 178
P+ +AI+MEY G L + G FSE + Q+L G+SY H +I HRD+K
Sbjct: 86 LTPT-HLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKL 144
Query: 179 SNLLVNNNNM-QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXX 237
N L++ + ++KI DFG SK S VGT AY++PE
Sbjct: 145 ENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVL----LRQEYDGKIA 199
Query: 238 DIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDG--ASPEFRSFIECC 295
D+WS G +PF P + D+ + I S+PD SPE I
Sbjct: 200 DVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRI-LSVKYSIPDDIRISPECCHLISRI 258
Query: 296 LQKEFSKRWTASQLLTHPFLCKNRRSD 322
+ + R + ++ TH + KN +D
Sbjct: 259 FVADPATRISIPEIKTHSWFLKNLPAD 285
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQ----VFREMEILRRT 106
D E ++V+G G G V V+H+ T K+YA+K++ ++R + E +I+
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS--KFEMIKRSDSAFFWEERDIMAFA 131
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
+SP++VQ F F+ + ++MEYM G L L++ N E ++++ L +
Sbjct: 132 NSPWVVQLFYAFQDDRY-LYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLALDAI 189
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGV-SKIMCRSLDACNSYVGTCAYMSPE 221
H IHRD+KP N+L++ + +K+ADFG K+ + C++ VGT Y+SPE
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSG-HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 244
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 23/285 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVY---KVQHRCTHKIYALKVVHG-----DADPTVRRQVFRE 99
+ + E L+VLG G G V+ K+ T K+YA+KV+ A T + R+
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 100 -MEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQ 158
+E +R+ SPF+V F+ + + ++++Y++ G L T L++ F+E ++ +
Sbjct: 111 VLEHIRQ--SPFLVTLHYAFQTET-KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGE 167
Query: 159 ILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IMCRSLDACNSYVGTCAY 217
I+ L +LH II+RDIK N+L+++N V + DFG+SK + + + GT Y
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNG-HVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 218 MSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP 277
M+P D D WS G PF G++ A + I +P
Sbjct: 227 MAP---DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP 283
Query: 278 PSLPDGASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLCK 317
P P S + I+ L K+ KR A ++ H F K
Sbjct: 284 P-YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 15/264 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSPFIVQC 114
+ LG G+ G V H T + ALK + + +V RE+ L+ P I++
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
+ + P+ DI +++EY D ++ K +E + QI+ + Y H HKI+HR
Sbjct: 75 YDVITTPT-DIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKIVHR 132
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+KP NLL+ ++N+ VKIADFG+S IM + + G+ Y +PE +
Sbjct: 133 DLKPENLLL-DDNLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVIN----GKLYAG 186
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
D+WS G PF P+ + + + +PD SP +S I
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPF-DDEFIPNLFKKVNSCVY----VMPDFLSPGAQSLIRR 241
Query: 295 CLQKEFSKRWTASQLLTHPFLCKN 318
+ + +R T ++ P+ N
Sbjct: 242 MIVADPMQRITIQEIRRDPWFNVN 265
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH--GDADPTVRRQVFREMEILRRTDSPFI 111
E ++ +G GN G ++ + +++ A+K + D V+R++ R P I
Sbjct: 22 ELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINH----RSLRHPNI 77
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
V+ + P+ +AI+MEY G L + G FSE + Q++ G+SY H ++
Sbjct: 78 VRFKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 172 IHRDIKPSNLLVNNNNM-QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
HRD+K N L++ + ++KIADFG SK S VGT AY++PE
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKASVLH-SQPKSAVGTPAYIAPEVL----LKK 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA--SPEF 288
D+WS G +PF P + ++ + I ++PD SPE
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI-LNVQYAIPDYVHISPEC 250
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSD 322
R I + +KR + ++ H + KN +D
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWFLKNLPAD 284
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 110/266 (41%), Gaps = 20/266 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG G G VY + + I ALKV+ V Q+ RE+EI P I++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
F I +++E+ G L L K+G F E + A ++ L Y H K+IHRDI
Sbjct: 82 YFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDI 140
Query: 177 KPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
KP NLL+ ++KIADFG V R C GT Y+ PE +
Sbjct: 141 KPENLLMGYKG-ELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIE-----GKTHD 190
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
D+W G PF P + + + PP L DG+ + I
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSH-TETHRRIVNVDLKFPPFLSDGS----KDLISK 245
Query: 295 CLQKEFSKRWTASQLLTHPFLCKNRR 320
L+ +R ++ HP++ N R
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWVKANSR 271
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 110/266 (41%), Gaps = 20/266 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG G G VY + + I ALKV+ V Q+ RE+EI P I++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
F I +++E+ G L L K+G F E + A ++ L Y H K+IHRDI
Sbjct: 83 YFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDI 141
Query: 177 KPSNLLVNNNNMQVKIADFG--VSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
KP NLL+ ++KIADFG V R C GT Y+ PE +
Sbjct: 142 KPENLLMGYKG-ELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIE-----GKTHD 191
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
D+W G PF P + + + PP L DG+ + I
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSH-TETHRRIVNVDLKFPPFLSDGS----KDLISK 246
Query: 295 CLQKEFSKRWTASQLLTHPFLCKNRR 320
L+ +R ++ HP++ N R
Sbjct: 247 LLRYHPPQRLPLKGVMEHPWVKANSR 272
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 23/279 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSP 109
D E L +G G+ G K++ + KI K + +G ++ + E+ +LR P
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 110 FIVQCFG-IFEKPSGDIAILMEYMDSGTLDTLLNKNGT-----FSEPKLAHIASQILKGL 163
IV+ + I ++ + + I+MEY + G L +++ K GT E + + +Q+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK-GTKERQYLDEEFVLRVMTQLTLAL 124
Query: 164 SYLH-----GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM 218
H GH ++HRD+KP+N+ ++ VK+ DFG+++I+ D +VGT YM
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 219 SPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPP 278
SPE+ + DIWS PF Q+ L I G
Sbjct: 184 SPEQMN-----RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE----LAGKIREGKFR 234
Query: 279 SLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
+P S E I L + R + ++L +P + +
Sbjct: 235 RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 119/277 (42%), Gaps = 16/277 (5%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV--------HGDADPTVRRQVFREME 101
Y + E ++LG G V + H+ T K YA+K++ + +R +E++
Sbjct: 3 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 62
Query: 102 ILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQIL 160
ILR+ P I+Q +E + ++ + M G L L + T SE + I +L
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTF-FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 121
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
+ + LH I+HRD+KP N+L+ +++M +K+ DFG S + GT +Y++P
Sbjct: 122 EVICALHKLNIVHRDLKPENILL-DDDMNIKLTDFGFS-CQLDPGEKLREVCGTPSYLAP 179
Query: 221 ERFDPDXXXXX-XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCA-ICFGDPP 278
E + D+WS G PF Q +M FG P
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 239
Query: 279 SLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
D S + + L + KR+TA + L HPF
Sbjct: 240 W--DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 24/265 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRT 106
I + DL + +G G+ GTV++ + + A+K++ D + RE+ I++R
Sbjct: 34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT---FSEPKLAHIASQILKGL 163
P IV G +P +++I+ EY+ G+L LL+K+G E + +A + KG+
Sbjct: 92 RHPNIVLFMGAVTQPP-NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 164 SYLHGHK--IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
+YLH I+HRD+K NLLV+ VK+ DFG+S++ GT +M+PE
Sbjct: 151 NYLHNRNPPIVHRDLKSPNLLVDKK-YTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPE 209
Query: 222 --RFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFG-DPP 278
R +P +W QP + A ++ A+ F
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELAT-----------LQQPWGNLNPAQVVAAVGFKCKRL 258
Query: 279 SLPDGASPEFRSFIECCLQKEFSKR 303
+P +P+ + IE C E KR
Sbjct: 259 EIPRNLNPQVAAIIEGCWTNEPWKR 283
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 18/263 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQC 114
++LG G V+ + H+ A+KV+ D DP+ + RE + + P IV
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 115 F--GIFEKPSGDIA-ILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
+ G E P+G + I+MEY+D TL +++ G + + + + + L++ H + I
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMC---RSLDACNSYVGTCAYMSPERFDPDXX 228
IHRD+KP+N+L++ N VK+ DFG+++ + S+ + +GT Y+SPE+ D
Sbjct: 138 IHRDVKPANILISATNA-VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD-- 194
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLP-DGASPE 287
D++S G PF G P PPS +G S +
Sbjct: 195 ---SVDARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPIPPSARHEGLSAD 249
Query: 288 FRSFIECCLQKEFSKRW-TASQL 309
+ + L K R+ TA+++
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEM 272
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 16/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFRE-----MEILRRTDSPFIVQ 113
LG G V K + + T YA K + + RR V RE + IL+ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
++E + D+ ++ E + G L L + + +E + QIL G+ YLH +I H
Sbjct: 79 LHEVYENKT-DVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 174 RDIKPSNLLVNNNNM---QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
D+KP N+++ + N+ ++KI DFG + +D N + + +PE P+
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFG----LAHKIDFGNEF--KNIFGTPEFVAPEIVNY 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+WS G PFL ++ A + A+ + S +
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN-VSAVNYEFEDEYFSNTSALAKD 250
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI L K+ KR T L HP++
Sbjct: 251 FIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 119/277 (42%), Gaps = 16/277 (5%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV--------HGDADPTVRRQVFREME 101
Y + E ++LG G V + H+ T K YA+K++ + +R +E++
Sbjct: 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75
Query: 102 ILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQIL 160
ILR+ P I+Q +E + ++ + M G L L + T SE + I +L
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTF-FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
+ + LH I+HRD+KP N+L+ +++M +K+ DFG S + GT +Y++P
Sbjct: 135 EVICALHKLNIVHRDLKPENILL-DDDMNIKLTDFGFS-CQLDPGEKLREVCGTPSYLAP 192
Query: 221 ERFDPDXXXXX-XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCA-ICFGDPP 278
E + D+WS G PF Q +M FG P
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 279 SLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
D S + + L + KR+TA + L HPF
Sbjct: 253 W--DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 27/277 (9%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
Y + L+ LG G G V++ + T +++ K ++ P + V E+ I+ +
Sbjct: 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHH 107
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
P ++ FE ++ +++E++ G L D + ++ SE ++ + Q +GL ++H
Sbjct: 108 PKLINLHDAFED-KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 168 GHKIIHRDIKPSNLLVNNNNM-QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
H I+H DIKP N++ VKI DFG++ + + T + +PE D +
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-EIVKVTTATAEFAAPEIVDRE 225
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPF--------LQPGQRPDWATLMCAICFGDPP 278
D+W+ G PF LQ +R DW A
Sbjct: 226 -----PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFS----- 275
Query: 279 SLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
SPE + FI+ LQKE KR T L HP+L
Sbjct: 276 ----SVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTDSPFIV 112
EKL+ +G G GTV+K ++R TH+I ALK V D D V RE+ +L+ IV
Sbjct: 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
+ + + ++ E+ D + NG + Q+LKGL + H ++
Sbjct: 65 RLHDVLHS-DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
HRD+KP NLL+N N ++K+A+FG+++ + ++ V T Y P+
Sbjct: 124 HRDLKPQNLLINRNG-ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPD 171
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 37/292 (12%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
SD E++ VLG G G V K ++ + YA+K + + + E+ +L + +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVMLLASLNHQY 63
Query: 111 IVQCFGI------FEKP------SGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIAS 157
+V+ + F KP + I MEY ++GTL D + ++N + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 158 QILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA---------- 207
QIL+ LSY+H IIHRD+KP N+ ++ + VKI DFG++K + RSLD
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESR-NVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 208 ----CNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRP 263
S +GT Y++ E D D++S +PF +R
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDG----TGHYNEKIDMYSLGIIFFEMI---YPFSTGMERV 235
Query: 264 DWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + ++ PP D + I + + +KR A LL +L
Sbjct: 236 NILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQC 114
++LG G V+ + H+ A+KV+ D DP+ + RE + + P IV
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 115 F--GIFEKPSGDIA-ILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
+ G E P+G + I+MEY+D TL +++ G + + + + + L++ H + I
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACN---SYVGTCAYMSPERFDPDXX 228
IHRD+KP+N++++ N VK+ DFG+++ + S ++ + +GT Y+SPE+ D
Sbjct: 138 IHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD-- 194
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLP-DGASPE 287
D++S G PF G P PPS +G S +
Sbjct: 195 ---SVDARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPIPPSARHEGLSAD 249
Query: 288 FRSFIECCLQKEFSKRW-TASQL 309
+ + L K R+ TA+++
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEM 272
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQC 114
++LG G V+ + H+ A+KV+ D DP+ + RE + + P IV
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 115 F--GIFEKPSGDIA-ILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
+ G E P+G + I+MEY+D TL +++ G + + + + + L++ H + I
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACN---SYVGTCAYMSPERFDPDXX 228
IHRD+KP+N++++ N VK+ DFG+++ + S ++ + +GT Y+SPE+ D
Sbjct: 138 IHRDVKPANIMISATN-AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD-- 194
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLP-DGASPE 287
D++S G PF G P PPS +G S +
Sbjct: 195 ---SVDARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPIPPSARHEGLSAD 249
Query: 288 FRSFIECCLQKEFSKRW-TASQL 309
+ + L K R+ TA+++
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEM 272
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 23/279 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSP 109
D E L +G G+ G K++ + KI K + +G ++ + E+ +LR P
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 110 FIVQCFG-IFEKPSGDIAILMEYMDSGTLDTLLNKNGT-----FSEPKLAHIASQILKGL 163
IV+ + I ++ + + I+MEY + G L +++ K GT E + + +Q+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK-GTKERQYLDEEFVLRVMTQLTLAL 124
Query: 164 SYLH-----GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM 218
H GH ++HRD+KP+N+ ++ VK+ DFG+++I+ ++VGT YM
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDTSFAKTFVGTPYYM 183
Query: 219 SPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPP 278
SPE+ + DIWS PF Q+ L I G
Sbjct: 184 SPEQMN-----RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE----LAGKIREGKFR 234
Query: 279 SLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
+P S E I L + R + ++L +P + +
Sbjct: 235 RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 8/201 (3%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
+ +G GN V +H T + A+K++ +PT +++FRE+ I++ + P IV+ F
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+ E + ++MEY G + L +G E + QI+ + Y H I+HRD
Sbjct: 81 EVIETEK-TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRD 139
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
+K NLL+ + +M +KIADFG S + +++ G+ Y +PE F
Sbjct: 140 LKAENLLL-DGDMNIKIADFGFSNEFTVG-NKLDTFCGSPPYAAPELFQ----GKKYDGP 193
Query: 236 XXDIWSXXXXXXXXXXGHFPF 256
D+WS G PF
Sbjct: 194 EVDVWSLGVILYTLVSGSLPF 214
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQC 114
++LG G V+ + H+ A+KV+ D DP+ + RE + + P IV
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 115 F--GIFEKPSGDIA-ILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
+ G E P+G + I+MEY+D TL +++ G + + + + + L++ H + I
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 137
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACN---SYVGTCAYMSPERFDPDXX 228
IHRD+KP+N++++ N VK+ DFG+++ + S ++ + +GT Y+SPE+ D
Sbjct: 138 IHRDVKPANIMISATNA-VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD-- 194
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLP-DGASPE 287
D++S G PF G P PPS +G S +
Sbjct: 195 ---SVDARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPIPPSARHEGLSAD 249
Query: 288 FRSFIECCLQKEFSKRW-TASQL 309
+ + L K R+ TA+++
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEM 272
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQC 114
++LG G V+ + H+ A+KV+ D DP+ + RE + + P IV
Sbjct: 35 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 115 F--GIFEKPSGDIA-ILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
+ G E P+G + I+MEY+D TL +++ G + + + + + L++ H + I
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI 154
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACN---SYVGTCAYMSPERFDPDXX 228
IHRD+KP+N++++ N VK+ DFG+++ + S ++ + +GT Y+SPE+ D
Sbjct: 155 IHRDVKPANIMISATN-AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD-- 211
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLP-DGASPE 287
D++S G PF G P PPS +G S +
Sbjct: 212 ---SVDARSDVYSLGCVLYEVLTGEPPFT--GDSPVSVAYQHVREDPIPPSARHEGLSAD 266
Query: 288 FRSFIECCLQKEFSKRW-TASQL 309
+ + L K R+ TA+++
Sbjct: 267 LDAVVLKALAKNPENRYQTAAEM 289
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 23/279 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSP 109
D E L +G G+ G K++ + KI K + +G ++ + E+ +LR P
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 110 FIVQCFG-IFEKPSGDIAILMEYMDSGTLDTLLNKNGT-----FSEPKLAHIASQILKGL 163
IV+ + I ++ + + I+MEY + G L +++ K GT E + + +Q+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK-GTKERQYLDEEFVLRVMTQLTLAL 124
Query: 164 SYLH-----GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM 218
H GH ++HRD+KP+N+ ++ VK+ DFG+++I+ ++VGT YM
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDTSFAKAFVGTPYYM 183
Query: 219 SPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPP 278
SPE+ + DIWS PF Q+ L I G
Sbjct: 184 SPEQMN-----RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE----LAGKIREGKFR 234
Query: 279 SLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCK 317
+P S E I L + R + ++L +P + +
Sbjct: 235 RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 18/180 (10%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQ----VFREMEILRRT 106
D + ++V+G G G V V+H+ + K+YA+K++ ++R + E +I+
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLS--KFEMIKRSDSAFFWEERDIMAFA 132
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
+SP++VQ F F+ + ++MEYM G L L++ N E ++++ L +
Sbjct: 133 NSPWVVQLFCAFQDDKY-LYMVMEYMPGGDLVNLMS-NYDVPEKWAKFYTAEVVLALDAI 190
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA-----CNSYVGTCAYMSPE 221
H +IHRD+KP N+L++ + +K+ADFG C +D C++ VGT Y+SPE
Sbjct: 191 HSMGLIHRDVKPDNMLLDKHG-HLKLADFGT----CMKMDETGMVHCDTAVGTPDYISPE 245
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 24/279 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ ++ E L++LG G G V V+ + T + YA+K++ + A V E +L+
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA-HTLTENRVLQ 203
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
+ PF+ F+ + +MEY + G L L++ FSE + ++I+ L
Sbjct: 204 NSRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 262
Query: 165 YLHGHK-IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
YLH K +++RD+K NL+++ + +KI DFG+ K + ++ GT Y++PE
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDG-HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 321
Query: 224 DPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPD 282
+ + D W G PF Q ++ LM I F P
Sbjct: 322 EDN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF------PR 370
Query: 283 GASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLC 316
PE +S + L+K+ +R A +++ H F
Sbjct: 371 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 409
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 24/279 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ ++ E L++LG G G V V+ + T + YA+K++ + A V E +L+
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA-HTLTENRVLQ 206
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
+ PF+ F+ + +MEY + G L L++ FSE + ++I+ L
Sbjct: 207 NSRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 265
Query: 165 YLHGHK-IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
YLH K +++RD+K NL+++ + +KI DFG+ K + ++ GT Y++PE
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDG-HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 324
Query: 224 DPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPD 282
+ + D W G PF Q ++ LM I F P
Sbjct: 325 EDN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF------PR 373
Query: 283 GASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLC 316
PE +S + L+K+ +R A +++ H F
Sbjct: 374 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 412
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 29/278 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 122
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K S ++ + T Y++PE P+
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE--- 238
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D+WS G+ PF + PG + M F +P
Sbjct: 239 --KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW--S 292
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 293 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 330
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 29/278 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 23 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 77
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 78 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 137
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K S ++ + T Y++PE P+
Sbjct: 138 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE--- 193
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D+WS G+ PF + PG + M F +P
Sbjct: 194 --KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW--S 247
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 248 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 285
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 29/278 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 78
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K S ++ + T Y++PE P+
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE--- 194
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D+WS G+ PF + PG + M F +P
Sbjct: 195 --KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW--S 248
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 249 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 286
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 115
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
LS+ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 116 LSFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 175 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 121/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 115
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 175 L----LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 29/278 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 76
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 77 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K S ++ + T Y++PE P+
Sbjct: 137 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE--- 192
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D+WS G+ PF + PG + M F +P
Sbjct: 193 --KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW--S 246
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 247 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 284
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 123/300 (41%), Gaps = 50/300 (16%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 110 FIVQC----------FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
IV+ + +FE S D L ++MD+ L + P + Q+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMD---LKDFMDASALTGI-------PLPLIKSYLFQL 115
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
L+GL++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 220 PERFDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWAT 267
PE DIWS FP + PD
Sbjct: 175 PEIL----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 268 LMCAICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 29/278 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 28 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 82
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 83 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 142
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K S ++ + T Y++PE P+
Sbjct: 143 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE--- 198
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D+WS G+ PF + PG + M F +P
Sbjct: 199 --KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW--S 252
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 253 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 290
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 29/278 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 30 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 84
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 85 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 144
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K S ++ + T Y++PE P+
Sbjct: 145 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE--- 200
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D+WS G+ PF + PG + M F +P
Sbjct: 201 --KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW--S 254
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 255 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 292
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 29/278 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 29 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 83
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 84 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 143
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K S ++ + T Y++PE P+
Sbjct: 144 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE--- 199
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D+WS G+ PF + PG + M F +P
Sbjct: 200 --KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW--S 253
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 254 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 291
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 50 YSDLEKLQ-VLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
+SD K Q VLG G+ G V + + T + A+KV+ T + + RE+++L++
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
D P I++ + FE G ++ E G L + FSE A I Q+L G++Y+
Sbjct: 90 DHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 148
Query: 167 HGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
H +KI+HRD+KP NLL+ + + ++I DFG+S S +GT Y++PE
Sbjct: 149 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPE 204
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 20/161 (12%)
Query: 56 LQVLGHGNGGTVYK-VQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQC 114
L+ LG G G V+ V + C ++ K+V DP + RE++I+RR D IV+
Sbjct: 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL--TDPQSVKHALREIKIIRRLDHDNIVKV 73
Query: 115 FGIFEKPSGD--------------IAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQIL 160
F I PSG + I+ EYM++ + L + G E Q+L
Sbjct: 74 FEIL-GPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL--EQGPLLEEHARLFMYQLL 130
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+GL Y+H ++HRD+KP+NL +N ++ +KI DFG+++IM
Sbjct: 131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 123/300 (41%), Gaps = 50/300 (16%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 110 FIVQC----------FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
IV+ + +FE S D L ++MD+ L + P + Q+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMD---LKDFMDASALTGI-------PLPLIKSYLFQL 114
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
L+GL++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRA 173
Query: 220 PERFDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWAT 267
PE DIWS FP + PD
Sbjct: 174 PEIL----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 268 LMCAICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 29/278 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 74 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 128
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 129 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 188
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K S ++ + T Y++PE P+
Sbjct: 189 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE--- 244
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D+WS G+ PF + PG + M F +P
Sbjct: 245 --KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW--S 298
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 299 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 336
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 123/300 (41%), Gaps = 50/300 (16%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 110 FIVQC----------FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
IV+ + +FE S D L ++MD+ L + P + Q+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSMD---LKKFMDASALTGI-------PLPLIKSYLFQL 113
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
L+GL++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRA 172
Query: 220 PERFDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWAT 267
PE DIWS FP + PD
Sbjct: 173 PEIL----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 268 LMCAICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 36/293 (12%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIAS---QILKGLSYL 166
IV+ + + ++ E++ L T ++ + P L I S Q+L+GL++
Sbjct: 66 NIVKLLDVIHT-ENKLYLVFEFLHQD-LKTFMDASALTGIP-LPLIKSYLFQLLQGLAFC 122
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 123 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL--- 178
Query: 227 XXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMCAICF 274
DIWS FP + PD
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 275 GD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 29/278 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 78
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K S ++ + T Y++PE P+
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE--- 194
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D+WS G+ PF + PG + M F +P
Sbjct: 195 --KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW--S 248
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 249 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 286
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 123/300 (41%), Gaps = 50/300 (16%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 110 FIVQC----------FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
IV+ + +FE S D L ++MD+ L + P + Q+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMD---LKKFMDASALTGI-------PLPLIKSYLFQL 115
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
L+GL++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRA 174
Query: 220 PERFDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWAT 267
PE DIWS FP + PD
Sbjct: 175 PEIL----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 268 LMCAICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 121/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 122
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 182 L----LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 36/293 (12%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIAS---QILKGLSYL 166
IV+ + + ++ E++D L ++ + P L I S Q+L+GL++
Sbjct: 66 NIVKLLDVIHT-ENKLYLVFEHVDQD-LKKFMDASALTGIP-LPLIKSYLFQLLQGLAFC 122
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 123 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL--- 178
Query: 227 XXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMCAICF 274
DIWS FP + PD
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 275 GD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 50 YSDLEKLQ-VLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
+SD K Q VLG G+ G V + + T + A+KV+ T + + RE+++L++
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
D P I++ + FE G ++ E G L + FSE A I Q+L G++Y+
Sbjct: 84 DHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 142
Query: 167 HGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
H +KI+HRD+KP NLL+ + + ++I DFG+S S +GT Y++PE
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPE 198
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 35/281 (12%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 76
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 77 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTC---AYMSPERFDPD 226
HRD+KP NLL + N +K+ DFG +K + NS C Y++PE P+
Sbjct: 137 AHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTEPCYTPYYVAPEVLGPE 192
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPS 279
D+WS G+ PF + PG + M F +P
Sbjct: 193 -----KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW 245
Query: 280 LPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 246 --SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 284
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 29/278 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 92
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 93 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 152
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K S ++ + T Y++PE P+
Sbjct: 153 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE--- 208
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D+WS G+ PF + PG + M F +P
Sbjct: 209 --KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW--S 262
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 263 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 300
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 36/293 (12%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIAS---QILKGLSYL 166
IV+ + + ++ E++ L T ++ + P L I S Q+L+GL++
Sbjct: 62 NIVKLLDVIHT-ENKLYLVFEHVHQD-LKTFMDASALTGIP-LPLIKSYLFQLLQGLAFC 118
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL--- 174
Query: 227 XXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMCAICF 274
DIWS FP + PD
Sbjct: 175 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 275 GD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 24/279 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ ++ E L++LG G G V V+ + T + YA+K++ + A V E +L+
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA-HTLTENRVLQ 64
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
+ PF+ F+ + +MEY + G L L++ FSE + ++I+ L
Sbjct: 65 NSRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 123
Query: 165 YLHGHK-IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
YLH K +++RD+K NL+++ + +KI DFG+ K + + GT Y++PE
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDG-HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 182
Query: 224 DPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPD 282
+ + D W G PF Q ++ LM I F P
Sbjct: 183 EDN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF------PR 231
Query: 283 GASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLC 316
PE +S + L+K+ +R A +++ H F
Sbjct: 232 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 270
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 119/291 (40%), Gaps = 32/291 (10%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHG 168
IV+ + + ++ E++ D + T P + Q+L+GL++ H
Sbjct: 63 NIVKLLDVIHT-ENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXX 228
H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 122 HRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL----L 176
Query: 229 XXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMCAICFGD 276
DIWS FP + PD D
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 277 -PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
PS P A +F RS + L + +KR +A L HPF
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 50 YSDLEKLQ-VLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
+SD K Q VLG G+ G V + + T + A+KV+ T + + RE+++L++
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
D P I++ + FE G ++ E G L + FSE A I Q+L G++Y+
Sbjct: 107 DHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 165
Query: 167 HGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
H +KI+HRD+KP NLL+ + + ++I DFG+S S +GT Y++PE
Sbjct: 166 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPE 221
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSPFIVQ 113
++ LG G+ G V H T + ALK+++ A ++ ++ RE+ LR P I++
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
+ + K +I +++EY + D ++ ++ SE + QI+ + Y H HKI+H
Sbjct: 69 LYDVI-KSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVH 126
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
RD+KP NLL+ + ++ VKIADFG+S IM + + G+ Y +PE
Sbjct: 127 RDLKPENLLL-DEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPE 172
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSPFIVQ 113
++ LG G+ G V H T + ALK+++ A ++ ++ RE+ LR P I++
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
+ + K +I +++EY + D ++ ++ SE + QI+ + Y H HKI+H
Sbjct: 78 LYDVI-KSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVH 135
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
RD+KP NLL+ + ++ VKIADFG+S IM + + G+ Y +PE
Sbjct: 136 RDLKPENLLL-DEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPE 181
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSPFIVQ 113
++ LG G+ G V H T + ALK+++ A ++ ++ RE+ LR P I++
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
+ + K +I +++EY + D ++ ++ SE + QI+ + Y H HKI+H
Sbjct: 79 LYDVI-KSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVH 136
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
RD+KP NLL+ + ++ VKIADFG+S IM + + G+ Y +PE
Sbjct: 137 RDLKPENLLL-DEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPE 182
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 9/178 (5%)
Query: 50 YSDLEKLQ-VLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
+SD K Q VLG G+ G V + + T + A+KV+ T + + RE+++L++
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSY 165
D P I++ + FE G ++ E G L D ++++ FSE A I Q+L G++Y
Sbjct: 108 DHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITY 165
Query: 166 LHGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
+H +KI+HRD+KP NLL+ + + ++I DFG+S S +GT Y++PE
Sbjct: 166 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPE 222
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 24/279 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ ++ E L++LG G G V V+ + T + YA+K++ + A V E +L+
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA-HTLTENRVLQ 65
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
+ PF+ F+ + +MEY + G L L++ FSE + ++I+ L
Sbjct: 66 NSRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 124
Query: 165 YLHGHK-IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
YLH K +++RD+K NL+++ + +KI DFG+ K + + GT Y++PE
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDG-HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 183
Query: 224 DPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPD 282
+ + D W G PF Q ++ LM I F P
Sbjct: 184 EDN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF------PR 232
Query: 283 GASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLC 316
PE +S + L+K+ +R A +++ H F
Sbjct: 233 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 271
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 24/279 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD---ADPTVRRQVFREMEILR 104
+ ++ E L++LG G G V V+ + T + YA+K++ + A V E +L+
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA-HTLTENRVLQ 63
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
+ PF+ F+ + +MEY + G L L++ FSE + ++I+ L
Sbjct: 64 NSRHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 122
Query: 165 YLHGHK-IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
YLH K +++RD+K NL+++ + +KI DFG+ K + + GT Y++PE
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDG-HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 181
Query: 224 DPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDWATLMCAICFGDPPSLPD 282
+ + D W G PF Q ++ LM I F P
Sbjct: 182 EDN-----DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF------PR 230
Query: 283 GASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLC 316
PE +S + L+K+ +R A +++ H F
Sbjct: 231 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 269
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRTDSPFIVQ 113
++ LG G+ G V H T + ALK+++ A ++ ++ RE+ LR P I++
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
+ + K +I +++EY + D ++ ++ SE + QI+ + Y H HKI+H
Sbjct: 73 LYDVI-KSKDEIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVH 130
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
RD+KP NLL+ + ++ VKIADFG+S IM + + G+ Y +PE
Sbjct: 131 RDLKPENLLL-DEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPE 176
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 122
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 182 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 115
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 175 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 114
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 174 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 114
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 174 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 115
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 175 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 44/300 (14%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRT 106
+ + +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 107 DSPFIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
+ P IV+ + + + L ++MD+ L + P + Q+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQL 116
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
L+GL++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRA 175
Query: 220 PERFDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWAT 267
PE DIWS FP + PD
Sbjct: 176 PEIL----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 268 LMCAICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 232 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH--GDADPTVRRQVFREMEILRRTDSPFI 111
E ++ +G GN G ++ + ++++ A+K + D V+R++ R P I
Sbjct: 21 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNI 76
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
V+ + P+ +AI+MEY G L + G FSE + Q++ G+SY H ++
Sbjct: 77 VRFKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 172 IHRDIKPSNLLVNNNNM-QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
HRD+K N L++ + ++KI DFG SK S VGT AY++PE
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVL----LKK 190
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA--SPEF 288
D+WS G +PF P + ++ + I ++PD SPE
Sbjct: 191 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI-LNVQYAIPDYVHISPEC 249
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSD 322
R I + +KR + ++ H + KN +D
Sbjct: 250 RHLISRIFVADPAKRISIPEIRNHEWFLKNLPAD 283
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 116
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 175
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 176 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 114
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 173
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 174 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 12/272 (4%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
E ++ +G GN G ++ + ++++ A+K + + + V RE+ R P IV+
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIAANVKREIINHRSLRHPNIVR 79
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
+ P+ +AI+MEY G L + G FSE + Q++ G+SY H ++ H
Sbjct: 80 FKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCH 138
Query: 174 RDIKPSNLLVNNNNM-QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
RD+K N L++ + ++KI DFG SK S VGT AY++PE
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVL----LKKEY 193
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA--SPEFRS 290
D+WS G +PF P + ++ + I ++PD SPE R
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI-LNVQYAIPDYVHISPECRH 252
Query: 291 FIECCLQKEFSKRWTASQLLTHPFLCKNRRSD 322
I + +KR + ++ H + KN +D
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWFLKNLPAD 284
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 116
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 176 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 115
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 175 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 115
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 175 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 116
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 176 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 115
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 175 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 114
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 173
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 174 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 117
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 118 LAFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 177 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 117
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 177 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 115
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 175 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 118
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 178 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 118
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 178 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 117
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 177 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 115/267 (43%), Gaps = 14/267 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVF-REMEILRRTDSPFIVQC 114
+ LG G V + T + YA K+++ Q RE I R P IV+
Sbjct: 9 FEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
+ G ++ + + G L + +SE +H QIL+ +++ H + I+HR
Sbjct: 69 HDSISE-EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHR 127
Query: 175 DIKPSNLLV--NNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE--RFDPDXXXX 230
D+KP NLL+ + VK+ADFG++ + A + GT Y+SPE R DP
Sbjct: 128 DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP----- 182
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+W+ G+ PF Q + + + P D +PE +
Sbjct: 183 --YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAG-AYDFPSPEWDTVTPEAKD 239
Query: 291 FIECCLQKEFSKRWTASQLLTHPFLCK 317
I L +KR TAS+ L HP++C+
Sbjct: 240 LINKMLTINPAKRITASEALKHPWICQ 266
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 119
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 178
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 179 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 235 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ ALK + D + V RE+ +L+ + P
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 116
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 176 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
S ++L+ LG+G TVYK ++ T ALK V D++ RE+ +++
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN 64
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK------LAHIASQILKGLS 164
IV+ + + + ++ E+MD+ L ++ + P+ + + Q+L+GL+
Sbjct: 65 IVRLYDVIHT-ENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
+ H +KI+HRD+KP NLL+N Q+K+ DFG+++ ++ +S V T Y +P+
Sbjct: 123 FCHENKILHRDLKPQNLLINKRG-QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVL- 180
Query: 225 PDXXXXXXXXXXXDIWS 241
DIWS
Sbjct: 181 ---MGSRTYSTSIDIWS 194
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSPFIVQC 114
L+ +G GN V +H T K A+K++ + + +++FRE+ I++ + P IV+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
F + E + ++MEY G + L +G E + QI+ + Y H I+HR
Sbjct: 79 FEVIETEK-TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NLL+ + +M +KIADFG S + +++ G+ Y +PE F
Sbjct: 138 DLKAENLLL-DADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQ----GKKYDG 191
Query: 235 XXXDIWSXXXXXXXXXXGHFPF 256
D+WS G PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 19/266 (7%)
Query: 48 IAYSDLEKLQV---LGHGNGGTVYKVQHRCTHKIYALKVVH--GDADPTVRRQVFREMEI 102
+ Y+ L ++ +G G VY+ ALK V D R +E+++
Sbjct: 26 MGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLN----KNGTFSEPKLAHIASQ 158
L++ + P +++ + F + ++ I++E D+G L ++ + E + Q
Sbjct: 86 LKQLNHPNVIKYYASFIE-DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 159 ILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM 218
+ L ++H +++HRDIKP+N+ + + VK+ D G+ + A +S VGT YM
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFITATGV-VKLGDLGLGRFFSSKTTAAHSLVGTPYYM 203
Query: 219 SPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPP 278
SPER + DIWS PF G + + +L I D P
Sbjct: 204 SPERIHEN-----GYNFKSDIWSLGCLLYEMAALQSPFY--GDKMNLYSLCKKIEQCDYP 256
Query: 279 SLP-DGASPEFRSFIECCLQKEFSKR 303
LP D S E R + C+ + KR
Sbjct: 257 PLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 115/263 (43%), Gaps = 18/263 (6%)
Query: 64 GGTVYKVQHRC----THKIYALKVVHGDADPTVRRQVF-REMEILRRTDSPFIVQCFGIF 118
G + V RC T + YA K+++ Q RE I R P IV+
Sbjct: 13 GKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI 72
Query: 119 EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKP 178
+ G ++ + + G L + +SE +H QIL+ +++ H + I+HRD+KP
Sbjct: 73 SE-EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKP 131
Query: 179 SNLLV--NNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE--RFDPDXXXXXXXX 234
NLL+ + VK+ADFG++ + A + GT Y+SPE R DP
Sbjct: 132 ENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP-------YG 184
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
D+W+ G+ PF Q + + A + P D +PE + I
Sbjct: 185 KPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIK-AGAYDFPSPEWDTVTPEAKDLINK 243
Query: 295 CLQKEFSKRWTASQLLTHPFLCK 317
L +KR TAS+ L HP++C+
Sbjct: 244 MLTINPAKRITASEALKHPWICQ 266
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSPFIVQC 114
L+ +G GN V +H T K A+K++ + + +++FRE+ I++ + P IV+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
F + E + ++MEY G + L +G E + QI+ + Y H I+HR
Sbjct: 79 FEVIETEK-TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NLL+ + +M +KIADFG S + +++ G+ Y +PE F
Sbjct: 138 DLKAENLLL-DADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQ----GKKYDG 191
Query: 235 XXXDIWSXXXXXXXXXXGHFPF 256
D+WS G PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 50 YSDLEKLQ-VLGHGNGGTVYKVQHRCTHKIYALKVVHGD--ADPTVRRQVFREMEILRRT 106
+SD K Q VLG G+ G V + + T + A+KV+ T + + RE+++L++
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
D P I + + FE G ++ E G L + FSE A I Q+L G++Y
Sbjct: 84 DHPNIXKLYEFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYX 142
Query: 167 HGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
H +KI+HRD+KP NLL+ + + ++I DFG+S S + +GT Y++PE
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK-IGTAYYIAPE 198
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSPFIVQC 114
L+ +G GN V +H T K A+K++ + + +++FRE+ I++ + P IV+
Sbjct: 12 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
F + E + ++MEY G + L +G E + QI+ + Y H I+HR
Sbjct: 72 FEVIETEK-TLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHR 130
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NLL+ + +M +KIADFG S + +++ G+ Y +PE F
Sbjct: 131 DLKAENLLL-DADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQ----GKKYDG 184
Query: 235 XXXDIWSXXXXXXXXXXGHFPF 256
D+WS G PF
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPF 206
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 15/259 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEIL-RRTD 107
SD L+V+G G+ G V +H+ YA+KV+ A + + E +L +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
PF+V F+ + + +++Y++ G L L + F EP+ A++I L YLH
Sbjct: 98 HPFLVGLHFSFQT-ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH 156
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
I++RD+KP N+L+++ + + DFG+ K +++ GT Y++PE
Sbjct: 157 SLNIVYRDLKPENILLDSQG-HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPE-----V 210
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPE 287
D W G PF + ++ P L +
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL-----NKPLQLKPNITNS 265
Query: 288 FRSFIECCLQKEFSKRWTA 306
R +E LQK+ +KR A
Sbjct: 266 ARHLLEGLLQKDRTKRLGA 284
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 37/292 (12%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
SD E++ VLG G G V K ++ + YA+K + + + E+ +L + +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVMLLASLNHQY 63
Query: 111 IVQCFGI------FEKP------SGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIAS 157
+V+ + F KP + I MEY ++ TL D + ++N + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 158 QILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA---------- 207
QIL+ LSY+H IIHRD+KP N+ ++ + VKI DFG++K + RSLD
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESR-NVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 208 ----CNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRP 263
S +GT Y++ E D D++S +PF +R
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDG----TGHYNEKIDMYSLGIIFFEMI---YPFSTGMERV 235
Query: 264 DWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + ++ PP D + I + + +KR A LL +L
Sbjct: 236 NILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSPFIVQC 114
L+ +G GN V +H T K A+K++ + + +++FRE+ I++ + P IV+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
F + E + ++MEY G + L +G E + QI+ + Y H I+HR
Sbjct: 79 FEVIETEK-TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NLL+ + +M +KIADFG S + +++ G Y +PE F
Sbjct: 138 DLKAENLLL-DADMNIKIADFGFSNEFTFG-NKLDAFCGAPPYAAPELFQ----GKKYDG 191
Query: 235 XXXDIWSXXXXXXXXXXGHFPF 256
D+WS G PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 119/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ AL + D + V RE+ +L+ + P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 115
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 175 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 119/297 (40%), Gaps = 44/297 (14%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT-VRRQVFREMEILRRTDSP 109
+ +K++ +G G G VYK +++ T ++ AL + D + V RE+ +L+ + P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 110 FIVQCFGIFEKPSGDIAI-------LMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
IV+ + + + L ++MD+ L + P + Q+L+G
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI-------PLPLIKSYLFQLLQG 114
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
L++ H H+++HRD+KP NLL+N +K+ADFG+++ + V T Y +PE
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 223 FDPDXXXXXXXXXXXDIWSX--XXXXXXXXXGHFP----------FLQPGQRPDWATLMC 270
DIWS FP + PD
Sbjct: 174 L----LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 271 AICFGD-PPSLPDGASPEF-----------RSFIECCLQKEFSKRWTASQLLTHPFL 315
D PS P A +F RS + L + +KR +A L HPF
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA---DPTVRRQVFREMEILR 104
+ +D L VLG G+ G V + T ++YA+K++ D D V + + +
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 105 RTDSPFIVQ---CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILK 161
PF+ Q CF ++ + +MEY++ G L + + G F EP+ A++I
Sbjct: 76 LDKPPFLTQLHSCFQTVDR----LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI 131
Query: 162 GLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
GL +LH II+RD+K N+++++ +KIADFG+ K + GT Y++PE
Sbjct: 132 GLFFLHKRGIIYRDLKLDNVMLDSEG-HIKIADFGMCKEHMMDGVTTREFCGTPDYIAPE 190
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSPFIVQC 114
L+ +G GN V +H T K A++++ + + +++FRE+ I++ + P IV+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
F + E + ++MEY G + L +G E + QI+ + Y H I+HR
Sbjct: 79 FEVIETEK-TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NLL+ + +M +KIADFG S + +++ G+ Y +PE F
Sbjct: 138 DLKAENLLL-DADMNIKIADFGFSNEFTFG-NKLDTFCGSPPYAAPELFQ----GKKYDG 191
Query: 235 XXXDIWSXXXXXXXXXXGHFPF 256
D+WS G PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 8/202 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSPFIVQC 114
L+ +G GN V +H T K A++++ + + +++FRE+ I++ + P IV+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
F + E + ++MEY G + L +G E + QI+ + Y H I+HR
Sbjct: 79 FEVIETEK-TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NLL+ + +M +KIADFG S + + + G+ Y +PE F
Sbjct: 138 DLKAENLLL-DADMNIKIADFGFSNEFTFG-NKLDEFCGSPPYAAPELFQ----GKKYDG 191
Query: 235 XXXDIWSXXXXXXXXXXGHFPF 256
D+WS G PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 22/269 (8%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V + HR T + ALK+++ P R++V + + P IV
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALKLLYDS--PKARQEVDHHWQA---SGGPHIVCILD 70
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME M+ G L + + + G F+E + A I I + +LH H I
Sbjct: 71 VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 130
Query: 172 IHRDIKPSNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + + +K+ DFG +K + +A + T Y++PE P+
Sbjct: 131 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCYTPYYVAPEVLGPE--- 185
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQ--RPDWATLMCAICFGDPPSLPDGASP 286
D+WS G PF GQ P + +G P S
Sbjct: 186 --KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSE 243
Query: 287 EFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + I L+ + ++R T +Q + HP++
Sbjct: 244 DAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 16/274 (5%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH--GDADPTVRRQVFREMEILRRTDSPFI 111
E ++ +G GN G ++ + ++++ A+K + D V+R++ R P I
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNI 77
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
V+ + P+ +AI+MEY G L + G FSE + Q++ G+SY H ++
Sbjct: 78 VRFKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 172 IHRDIKPSNLLVNNNNM-QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
HRD+K N L++ + ++KI FG SK S VGT AY++PE
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLH-SQPKSTVGTPAYIAPEVL----LKK 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA--SPEF 288
D+WS G +PF P + ++ + I ++PD SPE
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI-LNVQYAIPDYVHISPEC 250
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSD 322
R I + +KR + ++ H + KN +D
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWFLKNLPAD 284
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 22/269 (8%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V + HR T + ALK+++ P R++V + + P IV
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDS--PKARQEVDHHWQA---SGGPHIVCILD 89
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME M+ G L + + + G F+E + A I I + +LH H I
Sbjct: 90 VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 149
Query: 172 IHRDIKPSNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + + +K+ DFG +K + +A + T Y++PE P+
Sbjct: 150 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCYTPYYVAPEVLGPE--- 204
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQ--RPDWATLMCAICFGDPPSLPDGASP 286
D+WS G PF GQ P + +G P S
Sbjct: 205 --KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSE 262
Query: 287 EFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + I L+ + ++R T +Q + HP++
Sbjct: 263 DAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 46/309 (14%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADP-TVRRQVFREMEILRRTDSPF 110
+ E ++ +G+G G V + R T + A+K + D T ++ RE++IL+
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 111 IVQCFGIFEK--PSGD---IAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
I+ I P G+ + ++++ M+S L +++ + + + + Q+L+GL Y
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA----CNSYVGTCAYMSPE 221
+H ++IHRD+KPSNLLV N N ++KI DFG+++ +C S YV T Y +PE
Sbjct: 174 MHSAQVIHRDLKPSNLLV-NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 222 RFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPP--- 278
D+WS F PG+ + + G P
Sbjct: 233 LM----LSLHEYTQAIDLWSVGCIFGEMLARRQLF--PGKNYVHQLQLIMMVLGTPSPAV 286
Query: 279 --------------SLP-----------DGASPEFRSFIECCLQKEFSKRWTASQLLTHP 313
SLP GA + S + L+ E S R +A+ L HP
Sbjct: 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 346
Query: 314 FLCKNRRSD 322
FL K D
Sbjct: 347 FLAKYHDPD 355
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHG---------DADPTVRRQVFREMEILRRTD 107
+ LG G G V R T K A+K++ +ADP + V E+EIL++ +
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKLN 73
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
P I++ F+ + D I++E M+ G L + N E Q+L + YLH
Sbjct: 74 HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 131
Query: 168 GHKIIHRDIKPSNLLVNNNNMQ--VKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDP 225
+ IIHRD+KP N+L+++ +KI DFG SKI+ + + GT Y++PE
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVL-- 188
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D WS G+ PF + + + + + P + S
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 286 PEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ ++ L + R+T + L HP+L
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHG---------DADPTVRRQVFREMEILRRTD 107
+ LG G G V R T K A+K++ +ADP + V E+EIL++ +
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKLN 73
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
P I++ F+ + D I++E M+ G L + N E Q+L + YLH
Sbjct: 74 HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 131
Query: 168 GHKIIHRDIKPSNLLVNNNNMQ--VKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDP 225
+ IIHRD+KP N+L+++ +KI DFG SKI+ + + GT Y++PE
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVL-- 188
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D WS G+ PF + + + + + P + S
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 286 PEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ ++ L + R+T + L HP+L
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHG---------DADPTVRRQVFREMEILRRTD 107
+ LG G G V R T K A+K++ +ADP + V E+EIL++ +
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKLN 72
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
P I++ F+ + D I++E M+ G L + N E Q+L + YLH
Sbjct: 73 HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 130
Query: 168 GHKIIHRDIKPSNLLVNNNNMQ--VKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDP 225
+ IIHRD+KP N+L+++ +KI DFG SKI+ + + GT Y++PE
Sbjct: 131 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVL-- 187
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D WS G+ PF + + + + + P + S
Sbjct: 188 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 247
Query: 286 PEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ ++ L + R+T + L HP+L
Sbjct: 248 EKALDLVKKLLVVDPKARFTTEEALRHPWL 277
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHG---------DADPTVRRQVFREMEILRRTD 107
+ LG G G V R T K A+K++ +ADP + V E+EIL++ +
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKLN 73
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
P I++ F+ + D I++E M+ G L + N E Q+L + YLH
Sbjct: 74 HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 131
Query: 168 GHKIIHRDIKPSNLLVNNNNMQ--VKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDP 225
+ IIHRD+KP N+L+++ +KI DFG SKI+ + + GT Y++PE
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVL-- 188
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D WS G+ PF + + + + + P + S
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 286 PEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ ++ L + R+T + L HP+L
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWL 278
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADP-TVRRQVFREMEILRRTDSPF 110
+ E ++ +G+G G V + R T + A+K + D T ++ RE++IL+
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 111 IVQCFGIFEK--PSGD---IAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
I+ I P G+ + ++++ M+S L +++ + + + + Q+L+GL Y
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA----CNSYVGTCAYMSPE 221
+H ++IHRD+KPSNLLV N N ++KI DFG+++ +C S YV T Y +PE
Sbjct: 175 MHSAQVIHRDLKPSNLLV-NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 67 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 125 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL---- 179
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHG---------DADPTVRRQVFREMEILRRTD 107
+ LG G G V R T K A+K++ +ADP + V E+EIL++ +
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL--NVETEIEILKKLN 79
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
P I++ F+ + D I++E M+ G L + N E Q+L + YLH
Sbjct: 80 HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 137
Query: 168 GHKIIHRDIKPSNLLVNNNNMQ--VKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDP 225
+ IIHRD+KP N+L+++ +KI DFG SKI+ + + GT Y++PE
Sbjct: 138 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVL-- 194
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D WS G+ PF + + + + + P + S
Sbjct: 195 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 254
Query: 286 PEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ ++ L + R+T + L HP+L
Sbjct: 255 EKALDLVKKLLVVDPKARFTTEEALRHPWL 284
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH--GDADPTVRRQVFREMEILRRTDSPFI 111
E ++ +G GN G ++ + ++++ A+K + D V+R++ R P I
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH----RSLRHPNI 77
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
V+ + P+ +AI+MEY G L + G FSE + Q++ G+SY H ++
Sbjct: 78 VRFKEVILTPT-HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 172 IHRDIKPSNLLVNNNNM-QVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
HRD+K N L++ + ++KI FG SK ++ VGT AY++PE
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT-VGTPAYIAPEVL----LKK 191
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA--SPEF 288
D+WS G +PF P + ++ + I ++PD SPE
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI-LNVQYAIPDYVHISPEC 250
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLCKNRRSD 322
R I + +KR + ++ H + KN +D
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWFLKNLPAD 284
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 17/183 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
I Y ++E +V+G G G V K + R K A+K + +++ R+ E+ L R +
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRA--KDVAIKQIESESE---RKAFIVELRQLSRVN 60
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILK---GLS 164
P IV+ +G P + ++MEY + G+L +L+ AH S L+ G++
Sbjct: 61 HPNIVKLYGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 165 YLHGHK---IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
YLH + +IHRD+KP NLL+ +KI DFG + C + G+ A+M+PE
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNNKGSAAWMAPE 174
Query: 222 RFD 224
F+
Sbjct: 175 VFE 177
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQC 114
+ LG G Y++ T +++A KVV P + ++ E+ I + D+P +V
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
G FE + +++E +L L + +EP+ + Q ++G+ YLH +++IHR
Sbjct: 92 HGFFED-DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 150
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NL + N++M VKI DFG++ + + GT Y++PE
Sbjct: 151 DLKLGNLFL-NDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE-----VLCKKGHS 204
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
DIWS G PF + + + + S+P +P + I
Sbjct: 205 FEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK-----KNEYSVPRHINPVASALIRR 259
Query: 295 CLQKEFSKRWTASQLLTHPFL 315
L + + R + ++LLT F
Sbjct: 260 MLHADPTLRPSVAELLTDEFF 280
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 9/200 (4%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT--VRRQVFREMEILRRTDSPFIVQCFG 116
LG G G V +H+ T A+K+++ + V ++ RE++ L+ P I++ +
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
+ P+ D ++MEY+ G L + K+G E + + QIL + Y H H ++HRD+
Sbjct: 79 VISTPT-DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDL 137
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXX 236
KP N+L+ + +M KIADFG+S +M + + G+ Y +PE
Sbjct: 138 KPENVLL-DAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVIS----GRLYAGPE 191
Query: 237 XDIWSXXXXXXXXXXGHFPF 256
DIWS G PF
Sbjct: 192 VDIWSCGVILYALLCGTLPF 211
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 14/261 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQC 114
+ LG G Y++ T +++A KVV P + ++ E+ I + D+P +V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
G FE + +++E +L L + +EP+ + Q ++G+ YLH +++IHR
Sbjct: 108 HGFFED-DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 166
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NL + N++M VKI DFG++ + + + GT Y++PE
Sbjct: 167 DLKLGNLFL-NDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPE-----VLCKKGHS 220
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
DIWS G PF + + + + S+P +P + I
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK-----KNEYSVPRHINPVASALIRR 275
Query: 295 CLQKEFSKRWTASQLLTHPFL 315
L + + R + ++LLT F
Sbjct: 276 MLHADPTLRPSVAELLTDEFF 296
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 17/183 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
I Y ++E +V+G G G V K + R K A+K + +++ R+ E+ L R +
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRA--KDVAIKQIESESE---RKAFIVELRQLSRVN 59
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILK---GLS 164
P IV+ +G P + ++MEY + G+L +L+ AH S L+ G++
Sbjct: 60 HPNIVKLYGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 165 YLHGHK---IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
YLH + +IHRD+KP NLL+ +KI DFG + C + G+ A+M+PE
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNNKGSAAWMAPE 173
Query: 222 RFD 224
F+
Sbjct: 174 VFE 176
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT--VRRQVFREMEILRRTDSPFIVQCFG 116
LG G G V +H+ T A+K+++ + V ++ RE++ L+ P I++ +
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
+ P+ D ++MEY+ G L + K+G E + + QIL + Y H H ++HRD+
Sbjct: 79 VISTPT-DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDL 137
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRS---LDACNSYVGTCAYMSPERFDPDXXXXXXX 233
KP N+L+ + +M KIADFG+S +M D+C G+ Y +PE
Sbjct: 138 KPENVLL-DAHMNAKIADFGLSNMMSDGEFLRDSC----GSPNYAAPEVIS----GRLYA 188
Query: 234 XXXXDIWSXXXXXXXXXXGHFPF 256
DIWS G PF
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPF 211
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIV 112
+KL+ +G G G VYK + +I ALK + DA D + RE+ +L+ P IV
Sbjct: 24 QKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKI 171
+ + ++ E+M+ L +L++N T + ++ Q+L+G+++ H H+I
Sbjct: 83 SLIDVIHSERC-LTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXX 231
+HRD+KP NLL+N++ +K+ADFG+++ + + V T Y +P+
Sbjct: 141 LHRDLKPQNLLINSDG-ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL----MGSK 195
Query: 232 XXXXXXDIWS 241
DIWS
Sbjct: 196 KYSTSVDIWS 205
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIV 112
+KL+ +G G G VYK + +I ALK + DA D + RE+ +L+ P IV
Sbjct: 24 QKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKI 171
+ + ++ E+M+ L +L++N T + ++ Q+L+G+++ H H+I
Sbjct: 83 SLIDVIHSERC-LTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXX 231
+HRD+KP NLL+N++ +K+ADFG+++ + + V T Y +P+
Sbjct: 141 LHRDLKPQNLLINSDGA-LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL----MGSK 195
Query: 232 XXXXXXDIWS 241
DIWS
Sbjct: 196 KYSTSVDIWS 205
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 25/259 (9%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILR--RTDSPFIVQCFG 116
LG G+ G V++++ + T A+K VR +VFR E++ SP IV +G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVK--------KVRLEVFRAEELMACAGLTSPRIVPLYG 152
Query: 117 -IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+ E P + I ME ++ G+L L+ + G E + + Q L+GL YLH +I+H D
Sbjct: 153 AVREGPW--VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 210
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM--SPERFDPDXXXXXXX 233
+K N+L++++ + DFG +C D + T Y+ + P+
Sbjct: 211 VKADNVLLSSDGSHAALCDFG--HAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC 268
Query: 234 XXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPP---SLPDGASPEFRS 290
D+WS G P+ Q + P +C +PP +P +P
Sbjct: 269 DAKVDVWSSCCMMLHMLNGCHPWTQFFRGP-----LCLKIASEPPPVREIPPSCAPLTAQ 323
Query: 291 FIECCLQKEFSKRWTASQL 309
I+ L+KE R +A++L
Sbjct: 324 AIQEGLRKEPIHRVSAAEL 342
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQC 114
+ LG G Y++ T +++A KVV P + ++ E+ I + D+P +V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
G FE + +++E +L L + +EP+ + Q ++G+ YLH +++IHR
Sbjct: 108 HGFFED-DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 166
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NL + N++M VKI DFG++ + + GT Y++PE
Sbjct: 167 DLKLGNLFL-NDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE-----VLCKKGHS 220
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
DIWS G PF + + + + S+P +P + I
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK-----KNEYSVPRHINPVASALIRR 275
Query: 295 CLQKEFSKRWTASQLLTHPFL 315
L + + R + ++LLT F
Sbjct: 276 MLHADPTLRPSVAELLTDEFF 296
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHG---------DADPTVRRQVFREMEILRRTD 107
+ LG G G V R T K A++++ +ADP + V E+EIL++ +
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL--NVETEIEILKKLN 198
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
P I++ F+ + D I++E M+ G L + N E Q+L + YLH
Sbjct: 199 HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 256
Query: 168 GHKIIHRDIKPSNLLVNNNNMQ--VKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDP 225
+ IIHRD+KP N+L+++ +KI DFG SKI+ + + GT Y++PE
Sbjct: 257 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVL-- 313
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D WS G+ PF + + + + + P + S
Sbjct: 314 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 373
Query: 286 PEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ ++ L + R+T + L HP+L
Sbjct: 374 EKALDLVKKLLVVDPKARFTTEEALRHPWL 403
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHG---------DADPTVRRQVFREMEILRRTD 107
+ LG G G V R T K A++++ +ADP + V E+EIL++ +
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL--NVETEIEILKKLN 212
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
P I++ F+ + D I++E M+ G L + N E Q+L + YLH
Sbjct: 213 HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH 270
Query: 168 GHKIIHRDIKPSNLLVNNNNMQ--VKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDP 225
+ IIHRD+KP N+L+++ +KI DFG SKI+ + + GT Y++PE
Sbjct: 271 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVL-- 327
Query: 226 DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGAS 285
D WS G+ PF + + + + + P + S
Sbjct: 328 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 387
Query: 286 PEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ ++ L + R+T + L HP+L
Sbjct: 388 EKALDLVKKLLVVDPKARFTTEEALRHPWL 417
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQC 114
+ LG G Y++ T +++A KVV P + ++ E+ I + D+P +V
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
G FE + +++E +L L + +EP+ + Q ++G+ YLH +++IHR
Sbjct: 108 HGFFED-DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHR 166
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NL + N++M VKI DFG++ + + GT Y++PE
Sbjct: 167 DLKLGNLFL-NDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPE-----VLCKKGHS 220
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
DIWS G PF + + + + S+P +P + I
Sbjct: 221 FEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIK-----KNEYSVPRHINPVASALIRR 275
Query: 295 CLQKEFSKRWTASQLLTHPFL 315
L + + R + ++LLT F
Sbjct: 276 MLHADPTLRPSVAELLTDEFF 296
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 124/309 (40%), Gaps = 54/309 (17%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
SD + +LG G G V H+ T +I A+K + P + RE++IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 111 IVQCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
I+ F I ++P ++ I+ E M + + + S+ + + Q L+ +
Sbjct: 71 IITIFNI-QRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKV 127
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSL----------DACNSYVGTC 215
LHG +IHRD+KPSNLL+ N+N +K+ DFG+++I+ S YV T
Sbjct: 128 LHGSNVIHRDLKPSNLLI-NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATR 186
Query: 216 AYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFG 275
Y +PE D+WS F PG+ L+ G
Sbjct: 187 WYRAPEVM----LTSAKYSRAMDVWSCGCILAELFLRRPIF--PGRDYRHQLLLIFGIIG 240
Query: 276 DPPSLPD---GASPEFRSFIECC-------LQKEF-------------------SKRWTA 306
P S D SP R +I+ L+K F +KR TA
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300
Query: 307 SQLLTHPFL 315
+ L HP+L
Sbjct: 301 KEALEHPYL 309
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 25/259 (9%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILR--RTDSPFIVQCFG 116
LG G+ G V++++ + T A+K VR +VFR E++ SP IV +G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVK--------KVRLEVFRAEELMACAGLTSPRIVPLYG 133
Query: 117 -IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+ E P + I ME ++ G+L L+ + G E + + Q L+GL YLH +I+H D
Sbjct: 134 AVREGPW--VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 191
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM--SPERFDPDXXXXXXX 233
+K N+L++++ + DFG +C D + T Y+ + P+
Sbjct: 192 VKADNVLLSSDGSHAALCDFG--HAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC 249
Query: 234 XXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPP---SLPDGASPEFRS 290
D+WS G P+ Q + P +C +PP +P +P
Sbjct: 250 DAKVDVWSSCCMMLHMLNGCHPWTQFFRGP-----LCLKIASEPPPVREIPPSCAPLTAQ 304
Query: 291 FIECCLQKEFSKRWTASQL 309
I+ L+KE R +A++L
Sbjct: 305 AIQEGLRKEPIHRVSAAEL 323
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 24/188 (12%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D ++++++G G G V+K +HR K Y +K V + + + RE++ L + D I
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-----KAEREVKALAKLDHVNI 66
Query: 112 VQCFGIFEKPSGD---------------IAILMEYMDSGTLDTLLNKN-GTFSEPKLA-H 154
V G ++ D + I ME+ D GTL+ + K G + LA
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 155 IASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGT 214
+ QI KG+ Y+H K+I+RD+KPSN+ + + QVKI DFG+ + S GT
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK-QVKIGDFGLVTSLKNDGKRXRSK-GT 184
Query: 215 CAYMSPER 222
YMSPE+
Sbjct: 185 LRYMSPEQ 192
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 67 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 125 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 179
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 110/262 (41%), Gaps = 10/262 (3%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVF-REMEILRRTDSPFIVQCFGI 117
+G G V + CT YA K+++ Q RE I R IV+
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
+ G ++ + + G L + +SE +H QIL+ + + H ++HRD+K
Sbjct: 72 ISE-EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLK 130
Query: 178 PSNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
P NLL+ + VK+ADFG++ + A + GT Y+SPE +
Sbjct: 131 PENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKE-----AYGK 185
Query: 236 XXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECC 295
DIW+ G+ PF Q + + A + P D +PE ++ I
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDEDQHKLYQQIK-AGAYDFPSPEWDTVTPEAKNLINQM 244
Query: 296 LQKEFSKRWTASQLLTHPFLCK 317
L +KR TA + L HP++C+
Sbjct: 245 LTINPAKRITAHEALKHPWVCQ 266
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 98/190 (51%), Gaps = 9/190 (4%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVRRQVFREMEILRRTDSPFIV 112
E L ++G G+ G V K +++ T +I A+K + D D V++ RE+++L++ +V
Sbjct: 28 ENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLV 87
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTL-LNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
+ +K ++ E++D LD L L NG + ++ QI+ G+ + H H I
Sbjct: 88 NLLEVCKKKK-RWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF-QIINGIGFCHSHNI 145
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXX 231
IHRDIKP N+LV+ + + VK+ DFG ++ + + + V T Y +PE D
Sbjct: 146 IHRDIKPENILVSQSGV-VKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD----V 200
Query: 232 XXXXXXDIWS 241
D+W+
Sbjct: 201 KYGKAVDVWA 210
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 16/217 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF--- 115
LG G G V + H+ T + A+K + P R + E++I+++ + P +V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 116 -GIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGT---FSEPKLAHIASQILKGLSYLHGHK 170
G+ + D+ +L MEY + G L LN+ E + + S I L YLH ++
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 142
Query: 171 IIHRDIKPSNLLVNNNNMQV--KIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXX 228
IIHRD+KP N+++ ++ KI D G +K + + + C +VGT Y++PE +
Sbjct: 143 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLAPELLE---- 197
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D WS G PFL Q W
Sbjct: 198 -QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQW 233
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 37/292 (12%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
SD E++ VLG G G V K ++ + YA+K + + + E+ +L + +
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVXLLASLNHQY 63
Query: 111 IVQCFGI------FEKPSGDIA------ILMEYMDSGTL-DTLLNKNGTFSEPKLAHIAS 157
+V+ + F KP + I EY ++ TL D + ++N + +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR 123
Query: 158 QILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA---------- 207
QIL+ LSY+H IIHR++KP N+ ++ + VKI DFG++K + RSLD
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESR-NVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 208 ----CNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRP 263
S +GT Y++ E D D +S +PF +R
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDG----TGHYNEKIDXYSLGIIFFEXI---YPFSTGXERV 235
Query: 264 DWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + ++ PP D + I + + +KR A LL +L
Sbjct: 236 NILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 16/217 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF--- 115
LG G G V + H+ T + A+K + P R + E++I+++ + P +V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 116 -GIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGT---FSEPKLAHIASQILKGLSYLHGHK 170
G+ + D+ +L MEY + G L LN+ E + + S I L YLH ++
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 171 IIHRDIKPSNLLVNNNNMQV--KIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXX 228
IIHRD+KP N+++ ++ KI D G +K + + + C +VGT Y++PE +
Sbjct: 142 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLAPELLE---- 196
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D WS G PFL Q W
Sbjct: 197 -QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQW 232
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 67 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 125 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 179
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW 220
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 65 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 123 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 177
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 67 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 125 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 179
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 67 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 125 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 179
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 67 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 125 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 179
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 29/278 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK + P RR+V E+ R + P IV+
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKXLQDC--PKARREV--ELH-WRASQCPHIVRIVD 122
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ E +D G L + + G F+E + + I I + + YLH I
Sbjct: 123 VYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINI 182
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K S ++ + T Y++PE P+
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPYYVAPEVLGPE--- 238
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D WS G+ PF + PG + T + + P
Sbjct: 239 --KYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXK----TRIRXGQYEFPNPEWS 292
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ HP++ ++ +
Sbjct: 293 EVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTK 330
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA---DPTVRRQVFREMEILR 104
+ + E ++VLG G+ G V + + T +YA+KV+ D D V + + +
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
+ PF+ Q F F+ P + +ME+++ G L + K+ F E + A++I+ L
Sbjct: 80 ARNHPFLTQLFCCFQTPD-RLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALM 138
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
+LH II+RD+K N+L+++ K+ADFG MC+ CN +P+
Sbjct: 139 FLHDKGIIYRDLKLDNVLLDHEG-HCKLADFG----MCKE-GICNGVTTATFCGTPDYIA 192
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPF 256
P+ D W+ GH PF
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA---DPTVRRQVFREMEILR 104
+ D E ++LG G+ G V+ + + T++ +A+K + D D V + + +
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
+ PF+ F F+ ++ +MEY++ G L + F + A++I+ GL
Sbjct: 75 AWEHPFLTHMFCTFQTKE-NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
+LH I++RD+K N+L++ + +KIADFG+ K N + GT Y++PE
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDG-HIKIADFGMCKENMLGDAKTNEFCGTPDYIAPE 189
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 66 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 124 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 178
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 116/264 (43%), Gaps = 18/264 (6%)
Query: 59 LGHGNGGTVYK-VQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
+G G+ TVYK + T ++ ++ + R++ E E L+ P IV+ +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 118 FE---KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK--II 172
+E K I ++ E SGTL T L + L QILKGL +LH II
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
HRD+K N+ + VKI D G++ + S + +GT + +PE ++
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLATLKRASF--AKAVIGTPEFXAPEXYEE------K 205
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFG-DPPSLPDGASPEFRSF 291
D+++ +P+ + + A + + G P S A PE +
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYPY---SECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262
Query: 292 IECCLQKEFSKRWTASQLLTHPFL 315
IE C+++ +R++ LL H F
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFF 286
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I + +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 67 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 125 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 179
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 18/261 (6%)
Query: 64 GGTVYKVQHRCTHKI----YALKVVHGDADPTVRRQVF-REMEILRRTDSPFIVQCFGIF 118
G + V RC + YA K+++ Q RE I R P IV+
Sbjct: 31 GKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI 90
Query: 119 EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKP 178
+ G ++ + + G L + +SE +H QIL+ + + H ++HRD+KP
Sbjct: 91 SE-EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKP 149
Query: 179 SNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE--RFDPDXXXXXXXX 234
NLL+ + VK+ADFG++ + A + GT Y+SPE R DP
Sbjct: 150 ENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP-------YG 202
Query: 235 XXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIEC 294
D+W+ G+ PF Q + + A + P D +PE + I
Sbjct: 203 KPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK-AGAYDFPSPEWDTVTPEAKDLINK 261
Query: 295 CLQKEFSKRWTASQLLTHPFL 315
L SKR TA++ L HP++
Sbjct: 262 MLTINPSKRITAAEALKHPWI 282
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 119/294 (40%), Gaps = 53/294 (18%)
Query: 59 LGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
+G G G+V + R K+ K+ ++ +RE+ +L+ ++ +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 118 FEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
F S D ++M +M + L ++ FSE K+ ++ Q+LKGL Y+H ++
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTD-LQKIMGME--FSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA-CNSYVGTCAYMSPERFDPDXXXXX 231
HRD+KP NL V N + ++KI DFG + R DA YV T Y +PE
Sbjct: 167 HRDLKPGNLAV-NEDCELKILDFG----LARHADAEMTGYVVTRWYRAPEVI----LSWM 217
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAI--CFGDP------------ 277
DIWS G F + D+ + I G P
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGKTLF----KGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 273
Query: 278 -----PSLPDG-----------ASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
SLP ASP+ +E L+ + KR TA+Q LTHPF
Sbjct: 274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 118/294 (40%), Gaps = 53/294 (18%)
Query: 59 LGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
+G G G+V + R K+ K+ ++ +RE+ +L+ ++ +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 118 FEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
F S D ++M +M + + K FSE K+ ++ Q+LKGL Y+H ++
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLK---FSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA-CNSYVGTCAYMSPERFDPDXXXXX 231
HRD+KP NL V N + ++KI DFG + R DA YV T Y +PE
Sbjct: 149 HRDLKPGNLAV-NEDCELKILDFG----LARHADAEMTGYVVTRWYRAPEVI----LSWM 199
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAI--CFGDP------------ 277
DIWS G F + D+ + I G P
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGKTLF----KGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 255
Query: 278 -----PSLPDG-----------ASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
SLP ASP+ +E L+ + KR TA+Q LTHPF
Sbjct: 256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 14/222 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
D + +Q LG G G V +R T + A+K+V + +E+ I +
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN 66
Query: 111 IVQCFGIFEKPSGDIAIL-MEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+V+ +G + G+I L +EY G L + + EP Q++ G+ YLHG
Sbjct: 67 VVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDX 227
I HRDIKP NLL++ + +KI+DFG++ + N GT Y++PE
Sbjct: 125 GITHRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL---- 179
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG----QRPDW 265
D+WS G P+ QP + DW
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA---DPTVRRQVFREMEILRRTD 107
+D L VLG G+ G V + + T ++YA+K++ D D V + + +
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 108 SPFIVQ---CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
PF+ Q CF ++ + +MEY++ G L + + G F EP A++I GL
Sbjct: 401 PPFLTQLHSCFQTMDR----LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF 456
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
+L II+RD+K N+++++ +KIADFG+ K + GT Y++PE
Sbjct: 457 FLQSKGIIYRDLKLDNVMLDSEG-HIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE 512
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 127/310 (40%), Gaps = 56/310 (18%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
SD + +LG G G V H+ T +I A+K + P + RE++IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 111 IVQCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
I+ F I ++P ++ I+ E M + + + S+ + + Q L+ +
Sbjct: 71 IITIFNI-QRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKV 127
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNS-----------YVGT 214
LHG +IHRD+KPSNLL+ N+N +K+ DFG+++I+ S A NS +V T
Sbjct: 128 LHGSNVIHRDLKPSNLLI-NSNCDLKVCDFGLARIIDESA-ADNSEPTGQQSGMVEFVAT 185
Query: 215 CAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICF 274
Y +PE D+WS F PG+ L+
Sbjct: 186 RWYRAPEVM----LTSAKYSRAMDVWSCGCILAELFLRRPIF--PGRDYRHQLLLIFGII 239
Query: 275 GDPPSLPD---GASPEFRSFIECC-------LQKEF-------------------SKRWT 305
G P S D SP R +I+ L+K F +KR T
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 306 ASQLLTHPFL 315
A + L HP+L
Sbjct: 300 AKEALEHPYL 309
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 55 KLQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTDSPFIVQ 113
+LQ +G G+ G V+ + Y +K ++ R + RE+ +L P IVQ
Sbjct: 28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQ 87
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLN--KNGTFSEPKLAHIASQILKGLSYLHGHKI 171
FE+ +G + I+M+Y + G L +N K F E ++ QI L ++H KI
Sbjct: 88 YRESFEE-NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI 146
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
+HRDIK N+ + + V++ DFG+++++ +++ + +GT Y+SPE
Sbjct: 147 LHRDIKSQNIFLTKDGT-VQLGDFGIARVLNSTVELARACIGTPYYLSPE 195
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA---DPTVRRQVFREMEILRRTD 107
+D L VLG G+ G V + + T ++YA+K++ D D V + + +
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 108 SPFIVQ---CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLS 164
PF+ Q CF ++ + +MEY++ G L + + G F EP A++I GL
Sbjct: 80 PPFLTQLHSCFQTMDR----LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF 135
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
+L II+RD+K N+++++ +KIADFG+ K + GT Y++PE
Sbjct: 136 FLQSKGIIYRDLKLDNVMLDSEG-HIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE 191
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 121/287 (42%), Gaps = 25/287 (8%)
Query: 48 IAYSDLEKL-QVLGHGNGGTVYKVQHRCTHKIYALKVV---HGDADPTVRRQ-VFREMEI 102
+ + D+ +L +V+G G V + +R T + +A+K+V + P + + + RE I
Sbjct: 20 VLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI 79
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNG----TFSEPKLAHIASQ 158
P IV+ + G + ++ E+MD L + K +SE +H Q
Sbjct: 80 CHMLKHPHIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 159 ILKGLSYLHGHKIIHRDIKPSNLLV--NNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
IL+ L Y H + IIHRD+KP N+L+ N+ VK+ DFGV+ + S VGT
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPH 198
Query: 217 YMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGD 276
+M+PE D+W G PF +R L I G
Sbjct: 199 FMAPE-----VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-----LFEGIIKGK 248
Query: 277 ---PPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
P S + + L + ++R T + L HP+L + R
Sbjct: 249 YKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDR 295
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 37/202 (18%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
D ++++++G G G V+K +HR K Y ++ V + + + RE++ L + D I
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE-----KAEREVKALAKLDHVNI 67
Query: 112 VQ---CFGIFE---KPSGD----------------------IAILMEYMDSGTLDTLLNK 143
V C+ F+ + S D + I ME+ D GTL+ + K
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 144 N-GTFSEPKLA-HIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
G + LA + QI KG+ Y+H K+IHRD+KPSN+ + + QVKI DFG+ +
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTK-QVKIGDFGLVTSL 186
Query: 202 CRSLDACNSYVGTCAYMSPERF 223
S GT YMSPE+
Sbjct: 187 KNDGKRTRSK-GTLRYMSPEQI 207
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 18 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G KP +AI+ ++ + +L L+ + T F KL IA Q +G+ YLH IIHR
Sbjct: 75 GYSTKPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 132
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCR--SLDACNSYVGTCAYMSPE 221
D+K +N+ ++ +N VKI DFG++ + R G+ +M+PE
Sbjct: 133 DLKSNNIFLHEDNT-VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 31/272 (11%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVV---HGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+ LG G G V++V R T +A K V H TVR+++ + M +LR P +V
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEI-QTMSVLRH---PTLVN 112
Query: 114 CFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
FE ++ ++ E+M G L + + +++ SE + Q+ KGL ++H + +
Sbjct: 113 LHDAFED-DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 171
Query: 173 HRDIKPSNLL-VNNNNMQVKIADFGVSKIMCRSLDACNSY---VGTCAYMSPERFDPDXX 228
H D+KP N++ + ++K+ DFG++ LD S GT + +PE
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTA----HLDPKQSVKVTTGTAEFAAPE-----VA 222
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLM----CAICFGDPPSLPDGA 284
D+WS G PF G D TL C D S G
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSPF---GGENDDETLRNVKSCDWNMDD--SAFSGI 277
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLC 316
S + + FI L + + R T Q L HP+L
Sbjct: 278 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 309
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK------IYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+V+G G G V + + K I LKV + + RR E I+ + D P
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPN 84
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGLSYLHGH 169
I+ G+ K S + I+ EYM++G+LDT L KN G F+ +L + I G+ YL
Sbjct: 85 IIHLEGVVTK-SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXX 228
+HRD+ N+L+ N+N+ K++DFG+S+++ +A + G P R+ P+
Sbjct: 144 GYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI---PIRWTAPEAI 199
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 200 AFRKFTSASDVWSYGIVM-------WEVVSYGERPYW 229
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ + LG GN G+V Y T + A+K + + P +R RE++IL+ S
Sbjct: 9 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILKALHS 67
Query: 109 PFIVQCFGIFEKPS-GDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGLSYL 166
FIV+ G+ P ++ ++MEY+ SG L L ++ +L +SQI KG+ YL
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 127
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ +HRD+ N+LV + VKIADFG++K++
Sbjct: 128 GSRRCVHRDLAARNILV-ESEAHVKIADFGLAKLL 161
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 18/186 (9%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
SDL +VLG G G KV HR T ++ +K + D +R +E++++R + P
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELI-RFDEETQRTFLKEVKVMRCLEHPN 68
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGH 169
+++ G+ K + + EY+ GTL ++ + + + A I G++YLH
Sbjct: 69 VLKFIGVLYK-DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC---------RSLDACN-----SYVGTC 215
IIHRD+ N LV N V +ADFG++++M RSL + + VG
Sbjct: 128 NIIHRDLNSHNCLVRENK-NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 216 AYMSPE 221
+M+PE
Sbjct: 187 YWMAPE 192
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 123/309 (39%), Gaps = 54/309 (17%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
SD + +LG G G V H+ T +I A+K + P + RE++IL+
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 111 IVQCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
I+ F I ++P ++ I+ E M + + + S+ + + Q L+ +
Sbjct: 71 IITIFNI-QRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKV 127
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSL----------DACNSYVGTC 215
LHG +IHRD+KPSNLL+ N+N +K+ DFG+++I+ S V T
Sbjct: 128 LHGSNVIHRDLKPSNLLI-NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATR 186
Query: 216 AYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFG 275
Y +PE D+WS F PG+ L+ G
Sbjct: 187 WYRAPEVM----LTSAKYSRAMDVWSCGCILAELFLRRPIF--PGRDYRHQLLLIFGIIG 240
Query: 276 DPPSLPD---GASPEFRSFIECC-------LQKEF-------------------SKRWTA 306
P S D SP R +I+ L+K F +KR TA
Sbjct: 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300
Query: 307 SQLLTHPFL 315
+ L HP+L
Sbjct: 301 KEALEHPYL 309
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 14/259 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG G +++ T +++A K+V P R ++ E+ I R +V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
FE + + +++E +L L + +EP+ + QI+ G YLH +++IHRD+
Sbjct: 85 FFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXX 236
K NL + N +++VKI DFG++ + + + GT Y++PE
Sbjct: 144 KLGNLFL-NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS-----KKGHSFE 197
Query: 237 XDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCL 296
D+WS G PF + + + + S+P +P S I+ L
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKML 252
Query: 297 QKEFSKRWTASQLLTHPFL 315
Q + + R T ++LL F
Sbjct: 253 QTDPTARPTINELLNDEFF 271
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 5/168 (2%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDA---DPTVRRQVFREMEILRRTDSPFIVQ 113
++LG G+ G V+ + + T++ +A+K + D D V + + + + PF+
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
F F+ ++ +MEY++ G L + F + A++I+ GL +LH I++
Sbjct: 83 MFCTFQTKE-NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVY 141
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
RD+K N+L++ + +KIADFG+ K N + GT Y++PE
Sbjct: 142 RDLKLDNILLDKDG-HIKIADFGMCKENMLGDAKTNXFCGTPDYIAPE 188
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 14/259 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG G +++ T +++A K+V P R ++ E+ I R +V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
FE + + +++E +L L + +EP+ + QI+ G YLH +++IHRD+
Sbjct: 85 FFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXX 236
K NL + N +++VKI DFG++ + + + GT Y++PE
Sbjct: 144 KLGNLFL-NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS-----KKGHSFE 197
Query: 237 XDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCL 296
D+WS G PF + + + + S+P +P S I+ L
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKML 252
Query: 297 QKEFSKRWTASQLLTHPFL 315
Q + + R T ++LL F
Sbjct: 253 QTDPTARPTINELLNDEFF 271
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 70
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 131 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 164
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 101
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 161
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 162 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 195
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 74
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 135 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 168
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 75
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 135
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 136 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 169
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 76
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 136
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 137 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 170
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 70
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 131 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 164
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 68
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 129 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 162
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 31/272 (11%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVV---HGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+ LG G G V++V R T +A K V H TVR+++ + M +LR P +V
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEI-QTMSVLRH---PTLVN 218
Query: 114 CFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
FE ++ ++ E+M G L + + +++ SE + Q+ KGL ++H + +
Sbjct: 219 LHDAFED-DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 277
Query: 173 HRDIKPSNLL-VNNNNMQVKIADFGVSKIMCRSLDACNSY---VGTCAYMSPERFDPDXX 228
H D+KP N++ + ++K+ DFG++ LD S GT + +PE
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTA----HLDPKQSVKVTTGTAEFAAPE-----VA 328
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATL----MCAICFGDPPSLPDGA 284
D+WS G PF G D TL C D S G
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSPF---GGENDDETLRNVKSCDWNMDD--SAFSGI 383
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLC 316
S + + FI L + + R T Q L HP+L
Sbjct: 384 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 69
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 70 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 129
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 130 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 163
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 14/259 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG G +++ T +++A K+V P R ++ E+ I R +V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
FE + + +++E +L L + +EP+ + QI+ G YLH +++IHRD+
Sbjct: 89 FFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXX 236
K NL + N +++VKI DFG++ + + + GT Y++PE
Sbjct: 148 KLGNLFL-NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLS-----KKGHSFE 201
Query: 237 XDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCL 296
D+WS G PF + + + + S+P +P S I+ L
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKML 256
Query: 297 QKEFSKRWTASQLLTHPFL 315
Q + + R T ++LL F
Sbjct: 257 QTDPTARPTINELLNDEFF 275
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 73
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 134 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 167
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 70
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 131 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 164
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 77
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 78 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 137
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 138 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 171
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVV-HGDADPTVRRQVFREMEILRRTDSPFIVQC 114
L+ +G GN V +H T K A+K++ + + +++FRE+ I + + P IV+
Sbjct: 19 LKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKL 78
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
F + E + ++ EY G + L +G E + QI+ + Y H I+HR
Sbjct: 79 FEVIETEK-TLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHR 137
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXX 234
D+K NLL+ + + +KIADFG S + +++ G Y +PE F
Sbjct: 138 DLKAENLLL-DADXNIKIADFGFSNEFTFG-NKLDAFCGAPPYAAPELFQ----GKKYDG 191
Query: 235 XXXDIWSXXXXXXXXXXGHFPF 256
D+WS G PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 88
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 149 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 182
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ + LG GN G+V Y T + A+K + + P +R RE++IL+ S
Sbjct: 12 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILKALHS 70
Query: 109 PFIVQCFGIFEKPS-GDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGLSYL 166
FIV+ G+ P + ++MEY+ SG L L ++ +L +SQI KG+ YL
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 130
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE-RFDP 225
+ +HRD+ N+LV + VKIADFG++K++ LD + YV SP + P
Sbjct: 131 GSRRCVHRDLAARNILV-ESEAHVKIADFGLAKLL--PLDK-DYYVVREPGQSPIFWYAP 186
Query: 226 DXXXXXXXXXXXDIWS 241
+ D+WS
Sbjct: 187 ESLSDNIFSRQSDVWS 202
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ + LG GN G+V Y T + A+K + + P +R RE++IL+ S
Sbjct: 13 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILKALHS 71
Query: 109 PFIVQCFGIFEKPS-GDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGLSYL 166
FIV+ G+ P + ++MEY+ SG L L ++ +L +SQI KG+ YL
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 131
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE-RFDP 225
+ +HRD+ N+LV + VKIADFG++K++ LD + YV SP + P
Sbjct: 132 GSRRCVHRDLAARNILV-ESEAHVKIADFGLAKLL--PLDK-DYYVVREPGQSPIFWYAP 187
Query: 226 DXXXXXXXXXXXDIWS 241
+ D+WS
Sbjct: 188 ESLSDNIFSRQSDVWS 203
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ + LG GN G+V Y T + A+K + + P +R RE++IL+ S
Sbjct: 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILKALHS 83
Query: 109 PFIVQCFGIFEKPS-GDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGLSYL 166
FIV+ G+ P + ++MEY+ SG L L ++ +L +SQI KG+ YL
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 143
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE-RFDP 225
+ +HRD+ N+LV + VKIADFG++K++ LD + YV SP + P
Sbjct: 144 GSRRCVHRDLAARNILV-ESEAHVKIADFGLAKLL--PLDK-DYYVVREPGQSPIFWYAP 199
Query: 226 DXXXXXXXXXXXDIWS 241
+ D+WS
Sbjct: 200 ESLSDNIFSRQSDVWS 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 88
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 149 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 182
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 17/223 (7%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILR 104
++Y +E +V+G G G V + + + K A+K + G RR+ E I+
Sbjct: 13 VSYVKIE--EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 70
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGL 163
+ + P I++ G+ S + IL E+M++G LD+ L N G F+ +L + I G+
Sbjct: 71 QFEHPNIIRLEGVVTN-SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGM 129
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
YL +HRD+ N+LV N+N+ K++DFG+S+ + + + +Y + P R+
Sbjct: 130 RYLAEMSYVHRDLAARNILV-NSNLVCKVSDFGLSRFLEEN-SSDPTYTSSLGGKIPIRW 187
Query: 224 D-PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
P+ D WS + + G+RP W
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVM-------WEVMSFGERPYW 223
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 15/214 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
QV+G G G V + K A+K + RR E I+ + D P ++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ E+M++G+LD+ L +N G F+ +L + I G+ YL +
Sbjct: 99 LEGVVTK-STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 157
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXXXX 231
HRD+ N+LV N+N+ K++DFG+S+ + + +Y P R+ P+
Sbjct: 158 HRDLAARNILV-NSNLVCKVSDFGLSRFL-EDDTSDPTYTSALGGKIPIRWTAPEAIQYR 215
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 216 KFTSASDVWSYGIVM-------WEVMSYGERPYW 242
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 50/278 (17%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
QVLG G G V ++ ++ T + +ALK++ P RR+V E+ R + P IV+
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PKARREV--ELH-WRASQCPHIVRIVD 78
Query: 117 IFEKPSGD---IAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGHKI 171
++E + I+ME +D G L + + G F+E + + I I + + YLH I
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 172 IHRDIKPSNLLVNNN--NMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
HRD+KP NLL + N +K+ DFG +K + E++D
Sbjct: 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------------ETTGEKYDKS--- 178
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF-------LQPGQRPDWATLMCAICFGDPPSLPD 282
D+WS G+ PF + PG + M F +P
Sbjct: 179 -------CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--RIRMGQYEFPNPEW--S 227
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
S E + I L+ E ++R T ++ + HP++ ++ +
Sbjct: 228 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 265
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 14/259 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG G +++ T +++A K+V P R ++ E+ I R +V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
FE + + +++E +L L + +EP+ + QI+ G YLH +++IHRD+
Sbjct: 83 FFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXX 236
K NL + N +++VKI DFG++ + + GT Y++PE
Sbjct: 142 KLGNLFL-NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS-----KKGHSFE 195
Query: 237 XDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCL 296
D+WS G PF + + + + S+P +P S I+ L
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKML 250
Query: 297 QKEFSKRWTASQLLTHPFL 315
Q + + R T ++LL F
Sbjct: 251 QTDPTARPTINELLNDEFF 269
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 14/259 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG G +++ T +++A K+V P R ++ E+ I R +V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
FE + + +++E +L L + +EP+ + QI+ G YLH +++IHRD+
Sbjct: 107 FFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXX 236
K NL + N +++VKI DFG++ + + GT Y++PE
Sbjct: 166 KLGNLFL-NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS-----KKGHSFE 219
Query: 237 XDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCL 296
D+WS G PF + + + + S+P +P S I+ L
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKML 274
Query: 297 QKEFSKRWTASQLLTHPFL 315
Q + + R T ++LL F
Sbjct: 275 QTDPTARPTINELLNDEFF 293
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 121/274 (44%), Gaps = 14/274 (5%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQV--FRE-MEILRRTDS 108
D E L+V+G G V V+ + T ++YA+K+++ D R +V FRE ++L D
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN-KWDMLKRGEVSCFREERDVLVNGDR 120
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHI-ASQILKGLSYLH 167
+I Q F+ + + ++MEY G L TLL+K G ++A ++I+ + +H
Sbjct: 121 RWITQLHFAFQDENY-LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSY--VGTCAYMSPERFDP 225
+HRDIKP N+L++ +++ADFG S + R+ S VGT Y+SPE
Sbjct: 180 RLGYVHRDIKPDNILLDRCG-HIRLADFG-SCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 226 --DXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDG 283
D W+ G PF + ++ P + +G
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEG 297
Query: 284 ASPEFRSFIE--CCLQKEFSKRWTASQLLTHPFL 315
E R FI+ C + R A THPF
Sbjct: 298 VPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFF 331
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 86/154 (55%), Gaps = 7/154 (4%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+K++ LG G+ G V Y + T ++ A+K + DA P R +E++ILR
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYH 92
Query: 109 PFIVQCFGIFEKP-SGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
I++ G E + + ++MEY+ G+L L ++ + +L A QI +G++YLH
Sbjct: 93 EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLH 151
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHRD+ N+L++N+ + VKI DFG++K +
Sbjct: 152 AQHYIHRDLAARNVLLDNDRL-VKIGDFGLAKAV 184
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I+
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K + I+ EYM++G+LD L KN G F+ +L + I G+ YL +
Sbjct: 95 LEGVVTK-CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXXXX 231
HRD+ N+LV N+N+ K++DFG+S+++ +A + G P R+ P+
Sbjct: 154 HRDLAARNILV-NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI---PIRWTAPEAIAYR 209
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 210 KFTSASDVWSYGIVM-------WEVMSYGERPYW 236
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 21/264 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K + I+ EYM++G+LD L KN G F+ +L + I G+ YL +
Sbjct: 80 LEGVVTK-CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXXXX 231
HRD+ N+LV N+N+ K++DFG+S+++ +A + G P R+ P+
Sbjct: 139 HRDLAARNILV-NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI---PIRWTAPEAIAYR 194
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW----ATLMCAICFGDPPSLPDGASPE 287
D+WS + + G+RP W ++ AI G P
Sbjct: 195 KFTSASDVWSYGIVM-------WEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIA 247
Query: 288 FRSFIECCLQKEFSKRWTASQLLT 311
+ C QKE S R Q++
Sbjct: 248 LHQLMLDCWQKERSDRPKFGQIVN 271
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 14/259 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDA--DPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG G +++ T +++A K+V P R ++ E+ I R +V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
FE + + +++E +L L + +EP+ + QI+ G YLH +++IHRD+
Sbjct: 109 FFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXX 236
K NL + N +++VKI DFG++ + + GT Y++PE
Sbjct: 168 KLGNLFL-NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS-----KKGHSFE 221
Query: 237 XDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCL 296
D+WS G PF + + + + S+P +P S I+ L
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK-----KNEYSIPKHINPVAASLIQKML 276
Query: 297 QKEFSKRWTASQLLTHPFL 315
Q + + R T ++LL F
Sbjct: 277 QTDPTARPTINELLNDEFF 295
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 73
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L + KL SQI KG+ YL
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 134 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 167
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 2/167 (1%)
Query: 55 KLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQC 114
KL LG G TVYK + + T + ALK + + + RE+ +L+ IV
Sbjct: 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 115 FGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
I + ++ EY+D L + + + Q+L+GL+Y H K++HR
Sbjct: 66 HDIIHTEKS-LTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
D+KP NLL+N ++K+ADFG+++ ++ V T Y P+
Sbjct: 125 DLKPQNLLINERG-ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPD 170
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K + I+ EYM++G+LD L KN G F+ +L + I G+ YL +
Sbjct: 74 LEGVVTK-CKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXXXX 231
HRD+ N+LV N+N+ K++DFG+S+++ +A + G P R+ P+
Sbjct: 133 HRDLAARNILV-NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI---PIRWTAPEAIAYR 188
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 189 KFTSASDVWSYGIVM-------WEVMSYGERPYW 215
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 30 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G KP +AI+ ++ + +L L+ + T F KL IA Q +G+ YLH IIHR
Sbjct: 87 GYSTKPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCR--SLDACNSYVGTCAYMSPE 221
D+K +N+ ++ +N VKI DFG++ R G+ +M+PE
Sbjct: 145 DLKSNNIFLHEDNT-VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 21/273 (7%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKI---YALKVVHGDADPTVRRQVFREMEILR 104
I S + +++G G+ G V + R + A+K + RR E I+
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 105 RTDSPFIVQCFGIFEKPSGDIA-ILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKG 162
+ D P I++ G+ + G +A I+ EYM++G+LDT L +G F+ +L + + G
Sbjct: 106 QFDHPNIIRLEGVVTR--GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
+ YL +HRD+ N+LV ++N+ K++DFG+S+++ DA +Y T +
Sbjct: 164 MRYLSDLGYVHRDLAARNVLV-DSNLVCKVSDFGLSRVLEDDPDA--AYTTTGGKIPIRW 220
Query: 223 FDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWAT----LMCAICFGDPP 278
P+ D+WS + L G+RP W ++ ++ G
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVM-------WEVLAYGERPYWNMTNRDVISSVEEGYRL 273
Query: 279 SLPDGASPEFRSFIECCLQKEFSKRWTASQLLT 311
P G + C K+ ++R SQ+++
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 27/198 (13%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D E +Q LG G G V++ +++ YA+K + R +V RE++ L + + P
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 111 IVQCFGIF-----------EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLA---HIA 156
IV+ F + P + I M+ L +N T E + + HI
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRS------LDACNS 210
QI + + +LH ++HRD+KPSN+ +++ VK+ DFG+ M + L +
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 211 Y------VGTCAYMSPER 222
Y VGT YMSPE+
Sbjct: 184 YARHTGQVGTKLYMSPEQ 201
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++L K++VLG G GTVYK + KI A+KV+ + P +++ E ++
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
SP++ + GI + + ++ + M G LD + G L + QI KG+SY
Sbjct: 77 GSPYVSRLLGICL--TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSY 134
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV + N VKI DFG+++++
Sbjct: 135 LEDVRLVHRDLAARNVLVKSPN-HVKITDFGLARLL 169
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ LQ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 71
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++MEY+ G+L L K+ KL SQI KG+ YL
Sbjct: 72 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL 131
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHR++ N+LV N N +VKI DFG++K++
Sbjct: 132 GTKRYIHRNLATRNILVENEN-RVKIGDFGLTKVL 165
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 17/182 (9%)
Query: 50 YSDLEKLQVL-----GHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR-QVFR-EMEI 102
Y ++E +V+ G G+ GTVYK + + LKVV DPT + Q FR E+ +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVV----DPTPEQFQAFRNEVAV 85
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILK 161
LR+T I+ G K ++AI+ ++ + +L L+ T F +L IA Q +
Sbjct: 86 LRKTRHVNILLFMGYMTKD--NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ 143
Query: 162 GLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCR--SLDACNSYVGTCAYMS 219
G+ YLH IIHRD+K +N+ + + + VKI DFG++ + R G+ +M+
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFL-HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 220 PE 221
PE
Sbjct: 203 PE 204
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 23/274 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKI---YALKVVHGDADPTVRRQVFREMEILR 104
I S + +++G G+ G V + R + A+K + RR E I+
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 105 RTDSPFIVQCFGIFEKPSGDIA-ILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKG 162
+ D P I++ G+ + G +A I+ EYM++G+LDT L +G F+ +L + + G
Sbjct: 106 QFDHPNIIRLEGVVTR--GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
+ YL +HRD+ N+LV ++N+ K++DFG+S+++ DA + G P R
Sbjct: 164 MRYLSDLGYVHRDLAARNVLV-DSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI---PIR 219
Query: 223 FD-PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWAT----LMCAICFGDP 277
+ P+ D+WS + L G+RP W ++ ++ G
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVM-------WEVLAYGERPYWNMTNRDVISSVEEGYR 272
Query: 278 PSLPDGASPEFRSFIECCLQKEFSKRWTASQLLT 311
P G + C K+ ++R SQ+++
Sbjct: 273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 13/222 (5%)
Query: 98 REMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIAS 157
RE I R P IV+ + G ++ + + G L + +SE +H
Sbjct: 59 REARICRLLKHPNIVRLHDSISE-EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ 117
Query: 158 QILKGLSYLHGHKIIHRDIKPSNLLVNN--NNMQVKIADFGVSKIMCRSLDACNSYVGTC 215
QIL+ + + H ++HR++KP NLL+ + VK+ADFG++ + A + GT
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 177
Query: 216 AYMSPE--RFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAIC 273
Y+SPE R DP D+W+ G+ PF Q + +
Sbjct: 178 GYLSPEVLRKDP-------YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAG-A 229
Query: 274 FGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ P D +PE + I L SKR TA++ L HP++
Sbjct: 230 YDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 7/168 (4%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVH---GDADPTVRRQVFREMEILRRTDSPFIVQCF 115
LG G TVY + + A+K + + + T++R RE+ + IV
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR-FEREVHNSSQLSHQNIVSMI 77
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+ E+ ++MEY++ TL + +G S + +QIL G+ + H +I+HRD
Sbjct: 78 DVDEEDDC-YYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRD 136
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCR-SLDACNSYVGTCAYMSPER 222
IKP N+L+++N +KI DFG++K + SL N +GT Y SPE+
Sbjct: 137 IKPQNILIDSNKT-LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ 183
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRT 106
+A S E + +G G GTVYK + + ALK V + + + RE+ +LRR
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 107 DS---PFIVQCFGIFEKPSGD----IAILMEYMDSGTLDTLLNKNGTFSEPK--LAHIAS 157
++ P +V+ + D + ++ E++D L T L+K P + +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 158 QILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAY 217
Q L+GL +LH + I+HRD+KP N+LV + VK+ADFG+++I + A + V T Y
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQM-ALDPVVVTLWY 177
Query: 218 MSPE 221
+PE
Sbjct: 178 RAPE 181
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 125/308 (40%), Gaps = 60/308 (19%)
Query: 50 YSDLEKLQ--VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
+ D+ +LQ VLG G V + T + YA+K++ +R +VFRE+E+L +
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-HIRSRVFREVEMLYQCQ 68
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
V F + ++ E M G++ + ++K F+E + + + + L +LH
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH 128
Query: 168 GHKIIHRDIKPSNLLVNNNNM--QVKIADFGVSKIMCRSLDACN--------SYVGTCAY 217
I HRD+KP N+L + N VKI DFG+ + + D C+ + G+ Y
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGD-CSPISTPELLTPCGSAEY 187
Query: 218 MSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPF--------------------- 256
M+PE + D+WS G+ PF
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 257 -----LQPGQRP----DWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTAS 307
+Q G+ DWA + CA + I L ++ +R +A+
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAA----------------KDLISKLLVRDAKQRLSAA 291
Query: 308 QLLTHPFL 315
Q+L HP++
Sbjct: 292 QVLQHPWV 299
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 107/259 (41%), Gaps = 12/259 (4%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
LG G G V++ + K Y K V V V +E+ IL I+ F
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV--LVKKEISILNIARHRNILHLHESF 70
Query: 119 EKPSGDIAILMEYMDSGTLDTLLNKNG-TFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
E ++ ++ E++ + +N + +E ++ Q+ + L +LH H I H DI+
Sbjct: 71 ESME-ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIR 129
Query: 178 PSNLLVNN-NNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXX 236
P N++ + +KI +FG R L +++ + +PE + P+
Sbjct: 130 PENIIYQTRRSSTIKIIEFG----QARQLKPGDNF--RLLFTAPEYYAPEVHQHDVVSTA 183
Query: 237 XDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSFIECCL 296
D+WS G PFL + +M A D + + S E F++ L
Sbjct: 184 TDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE-ISIEAMDFVDRLL 242
Query: 297 QKEFSKRWTASQLLTHPFL 315
KE R TAS+ L HP+L
Sbjct: 243 VKERKSRMTASEALQHPWL 261
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 15/182 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV-----HGDAD---PTVRRQVFRE 99
+ D + L+V+G G+ V V+ + T +IYA+KVV + D D + VF +
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 100 MEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
++ PF+V F+ S + ++EY++ G L + + E +++I
Sbjct: 77 A-----SNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 130
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
L+YLH II+RD+K N+L+++ +K+ D+G+ K R D + + GT Y++
Sbjct: 131 SLALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 189
Query: 220 PE 221
PE
Sbjct: 190 PE 191
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 15/182 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV-----HGDAD---PTVRRQVFRE 99
+ D + L+V+G G+ V V+ + T +IYA+KVV + D D + VF +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 100 MEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
++ PF+V F+ S + ++EY++ G L + + E +++I
Sbjct: 66 A-----SNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 119
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
L+YLH II+RD+K N+L+++ +K+ D+G+ K R D + + GT Y++
Sbjct: 120 SLALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 178
Query: 220 PE 221
PE
Sbjct: 179 PE 180
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 15/182 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV-----HGDAD---PTVRRQVFRE 99
+ D + L+V+G G+ V V+ + T +IYA+KVV + D D + VF +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 100 MEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
++ PF+V F+ S + ++EY++ G L + + E +++I
Sbjct: 62 A-----SNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 115
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
L+YLH II+RD+K N+L+++ +K+ D+G+ K R D + + GT Y++
Sbjct: 116 SLALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIA 174
Query: 220 PE 221
PE
Sbjct: 175 PE 176
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 13/184 (7%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRT 106
+A S E + +G G GTVYK + + ALK V + + + RE+ +LRR
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 107 DS---PFIVQCFGIFEKPSGD----IAILMEYMDSGTLDTLLNKNGTFSEPK--LAHIAS 157
++ P +V+ + D + ++ E++D L T L+K P + +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 158 QILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAY 217
Q L+GL +LH + I+HRD+KP N+LV + VK+ADFG+++I + A V T Y
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQM-ALAPVVVTLWY 177
Query: 218 MSPE 221
+PE
Sbjct: 178 RAPE 181
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILR 104
++Y +E +V+G G G V + + + K A+K + G RR+ E I+
Sbjct: 15 VSYVKIE--EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 72
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGL 163
+ + P I++ G+ S + IL E+M++G LD+ L N G F+ +L + I G+
Sbjct: 73 QFEHPNIIRLEGVVTN-SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGM 131
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
YL +HRD+ N+LV N+N+ K++DFG+S+ +
Sbjct: 132 RYLAEMSYVHRDLAARNILV-NSNLVCKVSDFGLSRFL 168
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+ L+ LG GN G+V Y T ++ A+K + + +R RE+EIL+
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 73
Query: 109 PFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYL 166
IV+ G+ + ++ ++ME++ G+L L K+ KL SQI KG+ YL
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+ IHRD+ N+LV N N +VKI DFG++K++
Sbjct: 134 GTKRYIHRDLATRNILVENEN-RVKIGDFGLTKVL 167
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILR--RTDSPFIVQCFG 116
LG G+ G V++++ + T A+K VR +VFR E++ SP IV +G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLYG 131
Query: 117 -IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+ E P + I ME ++ G+L L+ + G E + + Q L+GL YLH +I+H D
Sbjct: 132 AVREGPW--VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 189
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM--SPERFDPDXXXXXXX 233
+K N+L++++ + + DFG +C D + T Y+ + P+
Sbjct: 190 VKADNVLLSSDGSRAALCDFG--HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 247
Query: 234 XXXXDIWSXXXXXXXXXXGHFPFLQ 258
DIWS G P+ Q
Sbjct: 248 DAKVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 15/214 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
QV+G G G V + K A+K + RR E I+ + D P ++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ E+M++G+LD+ L +N G F+ +L + I G+ YL +
Sbjct: 73 LEGVVTK-STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXXXX 231
HR + N+LV N+N+ K++DFG+S+ + + +Y P R+ P+
Sbjct: 132 HRALAARNILV-NSNLVCKVSDFGLSRFL-EDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 190 KFTSASDVWSYGIVM-------WEVMSYGERPYW 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 15/182 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVV-----HGDAD---PTVRRQVFRE 99
+ D + L+V+G G+ V V+ + T +IYA++VV + D D + VF +
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 100 MEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQI 159
++ PF+V F+ S + ++EY++ G L + + E +++I
Sbjct: 109 A-----SNHPFLVGLHSCFQTES-RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 162
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
L+YLH II+RD+K N+L+++ +K+ D+G+ K R D +++ GT Y++
Sbjct: 163 SLALNYLHERGIIYRDLKLDNVLLDSEG-HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 220 PE 221
PE
Sbjct: 222 PE 223
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 30/293 (10%)
Query: 50 YSDLEKL--QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRR-T 106
+ D+ KL ++LG G V K YA+K++ A + R +VFRE+E L +
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHS-RSRVFREVETLYQCQ 68
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
+ I++ FE + ++ E + G++ + K F+E + + + + L +L
Sbjct: 69 GNKNILELIEFFEDDT-RFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFL 127
Query: 167 HGHKIIHRDIKPSNLLVNNNNM--QVKIADFGVSKIMCRSLDACNSYV--------GTCA 216
H I HRD+KP N+L + VKI DF + M + ++C G+
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGM-KLNNSCTPITTPELTTPCGSAE 186
Query: 217 YMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFL-QPGQRPDW-ATLMCAICF 274
YM+PE + D+WS G+ PF+ G W +C +C
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ 246
Query: 275 GDP-PSLPDGA-----------SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
S+ +G S E + I L ++ +R +A+Q+L HP++
Sbjct: 247 NKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 30 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G P +AI+ ++ + +L L+ + T F KL IA Q +G+ YLH IIHR
Sbjct: 87 GYSTAPQ--LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA--CNSYVGTCAYMSPE 221
D+K +N+ ++ +N VKI DFG++ R + G+ +M+PE
Sbjct: 145 DLKSNNIFLHEDNT-VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ EYM++G+LD+ L K + F+ +L + I G+ YL +
Sbjct: 111 LEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFV 169
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
HRD+ N+L+ N+N+ K++DFG+S+++ +A +Y + P+
Sbjct: 170 HRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEA--AYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 227 FTSASDVWSYGIVL-------WEVMSYGERPYW 252
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK------IYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+V+G G G V + + K I LKV + + RR E I+ + D P
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPN 78
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGH 169
I++ G+ K S + I+ EYM++G+LD+ L K + F+ +L + I G+ YL
Sbjct: 79 IIRLEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXX 228
+HRD+ N+L+ N+N+ K++DFG+S+++ +A + G P R+ P+
Sbjct: 138 GYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI---PIRWTSPEAI 193
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 194 AYRKFTSASDVWSYGIVL-------WEVMSYGERPYW 223
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ EYM++G+LD+ L K + F+ +L + I G+ YL +
Sbjct: 99 LEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 157
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXX 231
HRD+ N+L+ N+N+ K++DFG+S+++ +A + G P R+ P+
Sbjct: 158 HRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI---PIRWTSPEAIAYR 213
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 214 KFTSASDVWSYGIVL-------WEVMSYGERPYW 240
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 13/184 (7%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRT 106
+A S E + +G G GTVYK + + ALK V + + + RE+ +LRR
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 107 DS---PFIVQCFGIFEKPSGD----IAILMEYMDSGTLDTLLNKNGTFSEPK--LAHIAS 157
++ P +V+ + D + ++ E++D L T L+K P + +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 119
Query: 158 QILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAY 217
Q L+GL +LH + I+HRD+KP N+LV + VK+ADFG+++I + A V T Y
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQM-ALFPVVVTLWY 177
Query: 218 MSPE 221
+PE
Sbjct: 178 RAPE 181
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ EYM++G+LD+ L K + F+ +L + I G+ YL +
Sbjct: 111 LEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
HRD+ N+L+ N+N+ K++DFG+S+++ +A +Y + P+
Sbjct: 170 HRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEA--AYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 227 FTSASDVWSYGIVL-------WEVMSYGERPYW 252
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 92/174 (52%), Gaps = 14/174 (8%)
Query: 59 LGHGNGGTVYKVQH-RCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTDS---PFIVQ 113
+G G G V+K + + + ALK V + + RE+ +LR ++ P +V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 114 CFGIFEKPSGD----IAILMEYMDSGTLDTLLNKNGTFSEPK--LAHIASQILKGLSYLH 167
F + D + ++ E++D L T L+K P + + Q+L+GL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
H+++HRD+KP N+LV ++ Q+K+ADFG+++I + A S V T Y +PE
Sbjct: 138 SHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQM-ALTSVVVTLWYRAPE 189
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ EYM++G+LD+ L K + F+ +L + I G+ YL +
Sbjct: 111 LEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXX 231
HRD+ N+L+ N+N+ K++DFG+S+++ +A + G P R+ P+
Sbjct: 170 HRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI---PIRWTSPEAIAYR 225
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 226 KFTSASDVWSYGIVL-------WEVMSYGERPYW 252
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ EYM++G+LD+ L K + F+ +L + I G+ YL +
Sbjct: 111 LEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXX 231
HRD+ N+L+ N+N+ K++DFG+S+++ +A + G P R+ P+
Sbjct: 170 HRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI---PIRWTSPEAIAYR 225
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 226 KFTSASDVWSYGIVL-------WEVMSYGERPYW 252
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ EYM++G+LD+ L K + F+ +L + I G+ YL +
Sbjct: 109 LEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 167
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXX 231
HRD+ N+L+ N+N+ K++DFG+S+++ +A + G P R+ P+
Sbjct: 168 HRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI---PIRWTSPEAIAYR 223
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 224 KFTSASDVWSYGIVL-------WEVMSYGERPYW 250
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ EYM++G+LD+ L K + F+ +L + I G+ YL +
Sbjct: 111 LEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXX 231
HRD+ N+L+ N+N+ K++DFG+S+++ +A + G P R+ P+
Sbjct: 170 HRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI---PIRWTSPEAIAYR 225
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 226 KFTSASDVWSYGIVL-------WEVMSYGERPYW 252
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 92/174 (52%), Gaps = 14/174 (8%)
Query: 59 LGHGNGGTVYKVQH-RCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTDS---PFIVQ 113
+G G G V+K + + + ALK V + + RE+ +LR ++ P +V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 114 CFGIFEKPSGD----IAILMEYMDSGTLDTLLNKNGTFSEPK--LAHIASQILKGLSYLH 167
F + D + ++ E++D L T L+K P + + Q+L+GL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
H+++HRD+KP N+LV ++ Q+K+ADFG+++I + A S V T Y +PE
Sbjct: 138 SHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQM-ALTSVVVTLWYRAPE 189
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 14 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G KP +AI+ ++ + +L L+ T F KL IA Q +G+ YLH IIHR
Sbjct: 71 GYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA--CNSYVGTCAYMSPE 221
D+K +N+ + + ++ VKI DFG++ + R + G+ +M+PE
Sbjct: 129 DLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 16 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G KP +AI+ ++ + +L L+ T F KL IA Q +G+ YLH IIHR
Sbjct: 73 GYSTKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 130
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA--CNSYVGTCAYMSPE 221
D+K +N+ + + ++ VKI DFG++ + R + G+ +M+PE
Sbjct: 131 DLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 92/174 (52%), Gaps = 14/174 (8%)
Query: 59 LGHGNGGTVYKVQH-RCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTDS---PFIVQ 113
+G G G V+K + + + ALK V + + RE+ +LR ++ P +V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 114 CFGIFEKPSGD----IAILMEYMDSGTLDTLLNKNGTFSEPK--LAHIASQILKGLSYLH 167
F + D + ++ E++D L T L+K P + + Q+L+GL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
H+++HRD+KP N+LV ++ Q+K+ADFG+++I + A S V T Y +PE
Sbjct: 138 SHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQM-ALTSVVVTLWYRAPE 189
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILR--RTDSPFIVQCFG 116
+G G+ G V++++ + T A+K VR +VFR E++ SP IV +G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLYG 117
Query: 117 -IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+ E P + I ME ++ G+L L+ + G E + + Q L+GL YLH +I+H D
Sbjct: 118 AVREGPW--VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 175
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM--SPERFDPDXXXXXXX 233
+K N+L++++ + + DFG +C D + T Y+ + P+
Sbjct: 176 VKADNVLLSSDGSRAALCDFG--HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 233
Query: 234 XXXXDIWSXXXXXXXXXXGHFPFLQ 258
DIWS G P+ Q
Sbjct: 234 DAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 19 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G KP +AI+ ++ + +L L+ T F KL IA Q +G+ YLH IIHR
Sbjct: 76 GYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 133
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCR--SLDACNSYVGTCAYMSPE 221
D+K +N+ + + ++ VKI DFG++ + R G+ +M+PE
Sbjct: 134 DLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 41 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G KP +AI+ ++ + +L L+ T F KL IA Q +G+ YLH IIHR
Sbjct: 98 GYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 155
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCR--SLDACNSYVGTCAYMSPE 221
D+K +N+ + + ++ VKI DFG++ + R G+ +M+PE
Sbjct: 156 DLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILR--RTDSPFIVQCFG 116
+G G+ G V++++ + T A+K VR +VFR E++ SP IV +G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLYG 133
Query: 117 -IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+ E P + I ME ++ G+L L+ + G E + + Q L+GL YLH +I+H D
Sbjct: 134 AVREGPW--VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 191
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM--SPERFDPDXXXXXXX 233
+K N+L++++ + + DFG +C D + T Y+ + P+
Sbjct: 192 VKADNVLLSSDGSRAALCDFG--HALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 249
Query: 234 XXXXDIWSXXXXXXXXXXGHFPFLQ 258
DIWS G P+ Q
Sbjct: 250 DAKVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 42 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G KP +AI+ ++ + +L L+ T F KL IA Q +G+ YLH IIHR
Sbjct: 99 GYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCR--SLDACNSYVGTCAYMSPE 221
D+K +N+ + + ++ VKI DFG++ + R G+ +M+PE
Sbjct: 157 DLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 29/263 (11%)
Query: 68 YKVQHRCTHKI----YALKVV-HGDADPTVRRQVFREMEIL-RRTDSPFIVQCFGIFEKP 121
Y V RC HK +A+K++ DPT E+EIL R P I+ +++
Sbjct: 35 YSVCKRCIHKATNMEFAVKIIDKSKRDPT------EEIEILLRYGQHPNIITLKDVYDD- 87
Query: 122 SGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNL 181
+ ++ E M G L + + FSE + + + I K + YLH ++HRD+KPSN+
Sbjct: 88 GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNI 147
Query: 182 LV---NNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXD 238
L + N ++I DFG +K L A N + T Y + P+ D
Sbjct: 148 LYVDESGNPESIRICDFGFAK----QLRAENGLLMTPCY-TANFVAPEVLERQGYDAACD 202
Query: 239 IWSXXXXXXXXXXGHFPFLQ-PGQRPDWATLMCAICFGDPPSLPDG----ASPEFRSFIE 293
IWS G+ PF P P+ ++ I G SL G S + +
Sbjct: 203 IWSLGVLLYTMLTGYTPFANGPDDTPE--EILARIGSGK-FSLSGGYWNSVSDTAKDLVS 259
Query: 294 CCLQKEFSKRWTASQLLTHPFLC 316
L + +R TA+ +L HP++
Sbjct: 260 KMLHVDPHQRLTAALVLRHPWIV 282
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 19 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G KP +AI+ ++ + +L L+ T F KL IA Q +G+ YLH IIHR
Sbjct: 76 GYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 133
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA--CNSYVGTCAYMSPE 221
D+K +N+ + + ++ VKI DFG++ + R + G+ +M+PE
Sbjct: 134 DLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 19/262 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P +V
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ + + I++E+M++G LD L K +G F+ +L + I G+ YL +
Sbjct: 109 LEGVVTR-GKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
HRD+ N+LV N+N+ K++DFG+S+++ +A Y T + P+
Sbjct: 168 HRDLAARNILV-NSNLVCKVSDFGLSRVIEDDPEAV--YTTTGGKIPVRWTAPEAIQYRK 224
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW----ATLMCAICFGDPPSLPDGASPEF 288
D+WS + + G+RP W ++ AI G P
Sbjct: 225 FTSASDVWSYGIVM-------WEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGL 277
Query: 289 RSFIECCLQKEFSKRWTASQLL 310
+ C QKE ++R Q++
Sbjct: 278 HQLMLDCWQKERAERPKFEQIV 299
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 24/282 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQV--FREMEILRR 105
+ + + +VLG G G V Q R T K+YA K + + + E +IL +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 106 TDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT--FSEPKLAHIASQILKGL 163
+S F+V +E + +++ M+ G L + G F E + A++I GL
Sbjct: 241 VNSRFVVSLAYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
LH +I++RD+KP N+L++++ ++I+D G++ + VGT YM+PE
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHG-HIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPE-- 355
Query: 224 DPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG---QRPDWATLMCAICFGDPPSL 280
D W+ G PF Q +R + L+ + P
Sbjct: 356 ---VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV----PEEY 408
Query: 281 PDGASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLCK 317
+ SP+ RS L K+ ++R +A ++ HP K
Sbjct: 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 9/192 (4%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSP 109
Y LEK+ G G G VYK Q+ K+ D + RE+ IL+
Sbjct: 4 YHGLEKI---GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
IV+ + + + ++ E++D L G Q+L G++Y H
Sbjct: 61 NIVKLYDVIHTKK-RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+++HRD+KP NLL+N ++KIADFG+++ + V T Y +P+
Sbjct: 120 RVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL----MG 174
Query: 230 XXXXXXXXDIWS 241
DIWS
Sbjct: 175 SKKYSTTIDIWS 186
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 20/256 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKI----YALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+V+G G G VYK + + A+K + R E I+ + I+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
+ G+ K + I+ EYM++G LD L K+G FS +L + I G+ YL
Sbjct: 110 RLEGVISKYK-PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXX 231
+HRD+ N+LV N+N+ K++DFG+S+++ +A +Y + + P+
Sbjct: 169 VHRDLAARNILV-NSNLVCKVSDFGLSRVLEDDPEA--TYTTSGGKIPIRWTAPEAISYR 225
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWA----TLMCAICFGDPPSLPDGASPE 287
D+WS + + G+RP W +M AI G P
Sbjct: 226 KFTSASDVWSFGIVM-------WEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSA 278
Query: 288 FRSFIECCLQKEFSKR 303
+ C Q+E ++R
Sbjct: 279 IYQLMMQCWQQERARR 294
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 9/192 (4%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSP 109
Y LEK+ G G G VYK Q+ K+ D + RE+ IL+
Sbjct: 4 YHGLEKI---GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
IV+ + + + ++ E++D L G Q+L G++Y H
Sbjct: 61 NIVKLYDVIHTKK-RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+++HRD+KP NLL+N ++KIADFG+++ + V T Y +P+
Sbjct: 120 RVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL----MG 174
Query: 230 XXXXXXXXDIWS 241
DIWS
Sbjct: 175 SKKYSTTIDIWS 186
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 24/282 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQV--FREMEILRR 105
+ + + +VLG G G V Q R T K+YA K + + + E +IL +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 106 TDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT--FSEPKLAHIASQILKGL 163
+S F+V +E + +++ M+ G L + G F E + A++I GL
Sbjct: 241 VNSRFVVSLAYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
LH +I++RD+KP N+L++++ ++I+D G++ + VGT YM+PE
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHG-HIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPE-- 355
Query: 224 DPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG---QRPDWATLMCAICFGDPPSL 280
D W+ G PF Q +R + L+ + P
Sbjct: 356 ---VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV----PEEY 408
Query: 281 PDGASPEFRSFIECCLQKEFSKRW-----TASQLLTHPFLCK 317
+ SP+ RS L K+ ++R +A ++ HP K
Sbjct: 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGI 117
LG G+ K H+ +++ +A+K++ + ++ E+ L+ + P IV+ +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK----EITALKLCEGHPNIVKLHEV 74
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIK 177
F ++ME ++ G L + K FSE + ++I +++ +S++H ++HRD+K
Sbjct: 75 FHDQLHTF-LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLK 133
Query: 178 PSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXX 235
P NLL N+N+++KI DFG +++ + T Y +PE + +
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQN-----GYDE 188
Query: 236 XXDIWSXXXXXXXXXXGHFPF 256
D+WS G PF
Sbjct: 189 SCDLWSLGVILYTMLSGQVPF 209
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ EYM++G+LD+ L K + F+ +L + I G+ YL +
Sbjct: 111 LEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXX 231
HRD+ N+L+ N+N+ K++DFG+++++ +A + G P R+ P+
Sbjct: 170 HRDLAARNILI-NSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI---PIRWTSPEAIAYR 225
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 226 KFTSASDVWSYGIVL-------WEVMSYGERPYW 252
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 124/308 (40%), Gaps = 60/308 (19%)
Query: 50 YSDLEKLQ--VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
+ D+ +LQ VLG G V + T + YA+K++ +R +VFRE+E+L +
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-HIRSRVFREVEMLYQCQ 68
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
V F + ++ E M G++ + ++K F+E + + + + L +LH
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH 128
Query: 168 GHKIIHRDIKPSNLLVNNNNM--QVKIADFGVSKIMCRSLDACN--------SYVGTCAY 217
I HRD+KP N+L + N VKI DF + + + D C+ + G+ Y
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD-CSPISTPELLTPCGSAEY 187
Query: 218 MSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPF--------------------- 256
M+PE + D+WS G+ PF
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 257 -----LQPGQRP----DWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTAS 307
+Q G+ DWA + CA + I L ++ +R +A+
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAA----------------KDLISKLLVRDAKQRLSAA 291
Query: 308 QLLTHPFL 315
Q+L HP++
Sbjct: 292 QVLQHPWV 299
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 9/192 (4%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSP 109
Y LEK+ G G G VYK Q+ K+ D + RE+ IL+
Sbjct: 4 YHGLEKI---GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
IV+ + + + ++ E++D L G Q+L G++Y H
Sbjct: 61 NIVKLYDVIHTKK-RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+++HRD+KP NLL+N ++KIADFG+++ + + T Y +P+
Sbjct: 120 RVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVL----MG 174
Query: 230 XXXXXXXXDIWS 241
DIWS
Sbjct: 175 SKKYSTTIDIWS 186
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 23/273 (8%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEIL-RRTDSPFIVQCF 115
+ +G G+ + H+ T+ YA+KV+ +R E+EIL R P I+
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDKS-----KRDPSEEIEILLRYGQHPNIITLK 87
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+++ + ++ E M G L + + FSE + + + I K + YLH ++HRD
Sbjct: 88 DVYDD-GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRD 146
Query: 176 IKPSNLLV---NNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
+KPSN+L + N ++I DFG +K L A N + T Y + P+
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAK----QLRAENGLLMTPCY-TANFVAPEVLKRQG 201
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPFLQ-PGQRPDWATLMCAICFGDPPSLPDG----ASPE 287
DIWS G+ PF P P+ ++ I G +L G S
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRIGSGK-FTLSGGNWNTVSET 258
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
+ + L + +R TA Q+L HP++ + +
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVRRQVFREMEILRRTDSP 109
S EKL +G G G V+K +HR T + ALK V+ + RE++IL+
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76
Query: 110 FIVQCFGI-------FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
+V I + + G I ++ ++ + L N F+ ++ + +L G
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 136
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC-NSY---VGTCAYM 218
L Y+H +KI+HRD+K +N+L+ + + +K+ADFG+++ + ++ N Y V T Y
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 219 SPE 221
PE
Sbjct: 196 PPE 198
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+K++ LG G+ G V Y + T ++ A+K + P +R RE+EILR
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 69
Query: 109 PFIVQCFGIFE-KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
IV+ G E + + ++MEY+ G+L L ++ +L A QI +G++YLH
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLH 128
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHR + N+L++N+ + VKI DFG++K +
Sbjct: 129 AQHYIHRALAARNVLLDNDRL-VKIGDFGLAKAV 161
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ EYM++G+LD+ L K + F+ +L + I G+ YL +
Sbjct: 111 LEGVVTK-SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
HRD+ N+L+ N+N+ K++DFG+ +++ +A +Y + P+
Sbjct: 170 HRDLAARNILI-NSNLVCKVSDFGLGRVLEDDPEA--AYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 227 FTSASDVWSYGIVL-------WEVMSYGERPYW 252
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+K++ LG G+ G V Y + T ++ A+K + P +R RE+EILR
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYH 70
Query: 109 PFIVQCFGIFE-KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
IV+ G E + + ++MEY+ G+L L ++ +L A QI +G++YLH
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLH 129
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHR + N+L++N+ + VKI DFG++K +
Sbjct: 130 AQHYIHRALAARNVLLDNDRL-VKIGDFGLAKAV 162
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVRRQVFREMEILRRTDSP 109
S EKL +G G G V+K +HR T + ALK V+ + RE++IL+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 110 FIVQCFGI-------FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
+V I + + G I ++ ++ + L N F+ ++ + +L G
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC-NSY---VGTCAYM 218
L Y+H +KI+HRD+K +N+L+ + + +K+ADFG+++ + ++ N Y V T Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 219 SPE 221
PE
Sbjct: 197 PPE 199
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 119/287 (41%), Gaps = 25/287 (8%)
Query: 48 IAYSDLEKL-QVLGHGNGGTVYKVQHRCTHKIYALKVV---HGDADPTVRRQ-VFREMEI 102
+ + D+ +L +V+G G V + +R T + +A+K+V + P + + + RE I
Sbjct: 20 VLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI 79
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNG----TFSEPKLAHIASQ 158
P IV+ + G + ++ E+MD L + K +SE +H Q
Sbjct: 80 CHMLKHPHIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 159 ILKGLSYLHGHKIIHRDIKPSNLLV--NNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
IL+ L Y H + IIHRD+KP +L+ N+ VK+ FGV+ + S VGT
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 198
Query: 217 YMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGD 276
+M+PE D+W G PF +R L I G
Sbjct: 199 FMAPE-----VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-----LFEGIIKGK 248
Query: 277 ---PPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
P S + + L + ++R T + L HP+L + R
Sbjct: 249 YKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDR 295
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 118/273 (43%), Gaps = 23/273 (8%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEIL-RRTDSPFIVQCF 115
+ +G G+ + H+ T+ YA+KV+ +R E+EIL R P I+
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDKS-----KRDPSEEIEILLRYGQHPNIITLK 87
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+++ + ++ E M G L + + FSE + + + I K + YLH ++HRD
Sbjct: 88 DVYDD-GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRD 146
Query: 176 IKPSNLLV---NNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
+KPSN+L + N ++I DFG +K L A N + T Y + P+
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAK----QLRAENGLLMTPCY-TANFVAPEVLKRQG 201
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPFLQ-PGQRPDWATLMCAICFGDPPSLPDG----ASPE 287
DIWS G+ PF P P+ ++ I G +L G S
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPE--EILTRIGSGK-FTLSGGNWNTVSET 258
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
+ + L + +R TA Q+L HP++ + +
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 85/154 (55%), Gaps = 7/154 (4%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+K++ LG G+ G V Y + T ++ A+K + D P R +E++ILR
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 109 PFIVQCFGIFE-KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
I++ G E + + ++MEY+ G+L L ++ + +L A QI +G++YLH
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLH 134
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHR++ N+L++N+ + VKI DFG++K +
Sbjct: 135 AQHYIHRNLAARNVLLDNDRL-VKIGDFGLAKAV 167
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 13/183 (7%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVRRQVFREMEILRRTDSP 109
S EKL +G G G V+K +HR T + ALK V+ + RE++IL+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 110 FIVQCFGI-------FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
+V I + + G I ++ ++ + L N F+ ++ + +L G
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC-NSY---VGTCAYM 218
L Y+H +KI+HRD+K +N+L+ + + +K+ADFG+++ + ++ N Y V T Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 219 SPE 221
PE
Sbjct: 197 PPE 199
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 150 LHRDLKPSNLLL-NTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 16/187 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH----GDADPTVRRQVFREMEIL 103
+A S E + +G G GTVYK + + ALK V G + RE+ +L
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 104 RRTDS---PFIVQCFGIFEKPSGD----IAILMEYMDSGTLDTLLNKNGTFSEPK--LAH 154
RR ++ P +V+ + D + ++ E++D L T L+K P +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD 124
Query: 155 IASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGT 214
+ Q L+GL +LH + I+HRD+KP N+LV + VK+ADFG+++I + A V T
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQM-ALTPVVVT 182
Query: 215 CAYMSPE 221
Y +PE
Sbjct: 183 LWYRAPE 189
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 59 LGHGNGGTVYK--VQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIVQCF 115
LG GN GTV K Q + K A+K++ +A DP ++ ++ E ++++ D+P+IV+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
GI E S ++ME + G L+ L +N + + + Q+ G+ YL +HRD
Sbjct: 95 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 152
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIM 201
+ N+L+ + KI+DFG+SK +
Sbjct: 153 LAARNVLLVTQHY-AKISDFGLSKAL 177
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 6/223 (2%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHG-DADPTVRRQVFRE-MEILRRTDS 108
D E L+V+G G G V V+ + K++A+K+++ + FRE ++L DS
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLH 167
+I F+ ++ ++M+Y G L TLL+K E ++++ + +H
Sbjct: 134 KWITTLHYAFQD-DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVS-KIMCRSLDACNSYVGTCAYMSPERFDPD 226
+HRDIKP N+L++ N +++ADFG K+M + VGT Y+SPE
Sbjct: 193 QLHYVHRDIKPDNILMDMNG-HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLM 269
D WS G PF + +M
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 59 LGHGNGGTVYK--VQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIVQCF 115
LG GN GTV K Q + K A+K++ +A DP ++ ++ E ++++ D+P+IV+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
GI E S ++ME + G L+ L +N + + + Q+ G+ YL +HRD
Sbjct: 95 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 152
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIM 201
+ N+L+ + KI+DFG+SK +
Sbjct: 153 LAARNVLLVTQHY-AKISDFGLSKAL 177
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 119/287 (41%), Gaps = 25/287 (8%)
Query: 48 IAYSDLEKL-QVLGHGNGGTVYKVQHRCTHKIYALKVV---HGDADPTVRRQ-VFREMEI 102
+ + D+ +L +V+G G V + +R T + +A+K+V + P + + + RE I
Sbjct: 22 VLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI 81
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNG----TFSEPKLAHIASQ 158
P IV+ + G + ++ E+MD L + K +SE +H Q
Sbjct: 82 CHMLKHPHIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 159 ILKGLSYLHGHKIIHRDIKPSNLLV--NNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
IL+ L Y H + IIHRD+KP +L+ N+ VK+ FGV+ + S VGT
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 200
Query: 217 YMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGD 276
+M+PE D+W G PF +R L I G
Sbjct: 201 FMAPE-----VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-----LFEGIIKGK 250
Query: 277 ---PPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
P S + + L + ++R T + L HP+L + R
Sbjct: 251 YKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDR 297
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 85/154 (55%), Gaps = 7/154 (4%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L+K++ LG G+ G V Y + T ++ A+K + D P R +E++ILR
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYH 75
Query: 109 PFIVQCFGIFE-KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
I++ G E + + ++MEY+ G+L L ++ + +L A QI +G++YLH
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLH 134
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHR++ N+L++N+ + VKI DFG++K +
Sbjct: 135 SQHYIHRNLAARNVLLDNDRL-VKIGDFGLAKAV 167
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 59 LGHGNGGTVYK--VQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIVQCF 115
LG GN GTV K Q + K A+K++ +A DP ++ ++ E ++++ D+P+IV+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
GI E S ++ME + G L+ L +N + + + Q+ G+ YL +HRD
Sbjct: 85 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 142
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIM 201
+ N+L+ + KI+DFG+SK +
Sbjct: 143 LAARNVLLVTQHY-AKISDFGLSKAL 167
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 59 LGHGNGGTVYK--VQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIVQCF 115
LG GN GTV K Q + K A+K++ +A DP ++ ++ E ++++ D+P+IV+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
GI E S ++ME + G L+ L +N + + + Q+ G+ YL +HRD
Sbjct: 79 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 136
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIM 201
+ N+L+ + KI+DFG+SK +
Sbjct: 137 LAARNVLLVTQHY-AKISDFGLSKAL 161
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 59 LGHGNGGTVYK--VQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIVQCF 115
LG GN GTV K Q + K A+K++ +A DP ++ ++ E ++++ D+P+IV+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
GI E S ++ME + G L+ L +N + + + Q+ G+ YL +HRD
Sbjct: 79 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 136
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIM 201
+ N+L+ + KI+DFG+SK +
Sbjct: 137 LAARNVLLVTQHY-AKISDFGLSKAL 161
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 112/277 (40%), Gaps = 20/277 (7%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSP 109
Y LE +G G+ G V + T A K + V R +E+EI++ D P
Sbjct: 10 YYTLE--NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHP 66
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
I++ + FE + DI ++ME G L + F E A I +L ++Y H
Sbjct: 67 NIIRLYETFED-NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL 125
Query: 170 KIIHRDIKPSN--LLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
+ HRD+KP N L ++ + +K+ DFG++ + + VGT Y+SP+ +
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-RFKPGKMMRTKVGTPYYVSPQVLE--- 181
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAI---CFGDPPSLPDGA 284
D WS G+ PF P +M I F P
Sbjct: 182 ---GLYGPECDEWSAGVMMYVLLCGYPPFSAPTD----XEVMLKIREGTFTFPEKDWLNV 234
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRRS 321
SP+ S I L K +R T+ Q L H + K S
Sbjct: 235 SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 271
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 59 LGHGNGGTVYK--VQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIVQCF 115
LG GN GTV K Q + K A+K++ +A DP ++ ++ E ++++ D+P+IV+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
GI E S ++ME + G L+ L +N + + + Q+ G+ YL +HRD
Sbjct: 93 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 150
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIM 201
+ N+L+ + KI+DFG+SK +
Sbjct: 151 LAARNVLLVTQHY-AKISDFGLSKAL 175
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 112/277 (40%), Gaps = 20/277 (7%)
Query: 50 YSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSP 109
Y LE +G G+ G V + T A K + V R +E+EI++ D P
Sbjct: 27 YYTLE--NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHP 83
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
I++ + FE + DI ++ME G L + F E A I +L ++Y H
Sbjct: 84 NIIRLYETFED-NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL 142
Query: 170 KIIHRDIKPSN--LLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
+ HRD+KP N L ++ + +K+ DFG++ + + VGT Y+SP+ +
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA-RFKPGKMMRTKVGTPYYVSPQVLE--- 198
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAI---CFGDPPSLPDGA 284
D WS G+ PF P +M I F P
Sbjct: 199 ---GLYGPECDEWSAGVMMYVLLCGYPPFSAPTD----XEVMLKIREGTFTFPEKDWLNV 251
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRRS 321
SP+ S I L K +R T+ Q L H + K S
Sbjct: 252 SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 288
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 59 LGHGNGGTVYK--VQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIVQCF 115
LG GN GTV K Q + K A+K++ +A DP ++ ++ E ++++ D+P+IV+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
GI E S ++ME + G L+ L +N + + + Q+ G+ YL +HRD
Sbjct: 75 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 132
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIM 201
+ N+L+ + KI+DFG+SK +
Sbjct: 133 LAARNVLLVTQHY-AKISDFGLSKAL 157
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 59 LGHGNGGTVYK--VQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIVQCF 115
LG GN GTV K Q + K A+K++ +A DP ++ ++ E ++++ D+P+IV+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
GI E S ++ME + G L+ L +N + + + Q+ G+ YL +HRD
Sbjct: 73 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 130
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIM 201
+ N+L+ + KI+DFG+SK +
Sbjct: 131 LAARNVLLVTQHY-AKISDFGLSKAL 155
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 14 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G P +AI+ ++ + +L L+ T F KL IA Q +G+ YLH IIHR
Sbjct: 71 GYSTAPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA--CNSYVGTCAYMSPE 221
D+K +N+ + + ++ VKI DFG++ + R + G+ +M+PE
Sbjct: 129 DLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 34 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G KP +AI+ ++ + +L L+ T F KL IA Q +G+ YLH IIHR
Sbjct: 91 GYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 148
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCR--SLDACNSYVGTCAYMSPE 221
D+K +N+ + + ++ VKI DFG++ R G+ +M+PE
Sbjct: 149 DLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 196
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 42 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G KP +AI+ ++ + +L L+ T F KL IA Q +G+ YLH IIHR
Sbjct: 99 GYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCR--SLDACNSYVGTCAYMSPE 221
D+K +N+ + + ++ VKI DFG++ R G+ +M+PE
Sbjct: 157 DLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 204
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR-EMEILRRTDSPFIVQCF 115
Q +G G+ GTVYK + H A+K+++ A + Q F+ E+ +LR+T I+
Sbjct: 14 QRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHKIIHR 174
G KP +AI+ ++ + +L L+ T F KL IA Q +G+ YLH IIHR
Sbjct: 71 GYSTKPQ--LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA--CNSYVGTCAYMSPE 221
D+K +N+ + + ++ VKI DFG++ R + G+ +M+PE
Sbjct: 129 DLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 59 LGHGNGGTVYK--VQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIVQCF 115
LG GN GTV K Q + K A+K++ +A DP ++ ++ E ++++ D+P+IV+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
GI E S ++ME + G L+ L +N + + + Q+ G+ YL +HRD
Sbjct: 437 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 494
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSY--VGTCAYMSPERFDPDXXXXXXX 233
+ N+L+ + KI+DFG+SK +L A +Y T + + P+
Sbjct: 495 LAARNVLLVTQHY-AKISDFGLSK----ALRADENYYKAQTHGKWPVKWYAPECINYYKF 549
Query: 234 XXXXDIWS 241
D+WS
Sbjct: 550 SSKSDVWS 557
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 146 LHRDLKPSNLLL-NTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 146 LHRDLKPSNLLL-NTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 21/216 (9%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK------IYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+V+G G G V + + K I LKV + + RR E I+ + D P
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPN 78
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGH 169
I++ G+ K S + I+ E M++G+LD+ L K + F+ +L + I G+ YL
Sbjct: 79 IIRLEGVVTK-SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+HRD+ N+L+ N+N+ K++DFG+S+++ +A +Y + P+
Sbjct: 138 GYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEA--AYTTRGGKIPIRWTSPEAIA 194
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 195 YRKFTSASDVWSYGIVL-------WEVMSYGERPYW 223
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++L++++VLG G GTVYK V T KI A+K+++ P + E I+
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D P +V+ G+ P+ I ++ + M G L+ + L + QI KG+ Y
Sbjct: 98 DHPHLVRLLGVCLSPT--IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 155
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV + N VKI DFG+++++
Sbjct: 156 LEERRLVHRDLAARNVLVKSPN-HVKITDFGLARLL 190
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ E M++G+LD+ L K + F+ +L + I G+ YL +
Sbjct: 111 LEGVVTK-SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAV 169
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
HRD+ N+L+ N+N+ K++DFG+S+++ +A +Y + P+
Sbjct: 170 HRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEA--AYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 227 FTSASDVWSYGIVL-------WEVMSYGERPYW 252
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 146 LHRDLKPSNLLL-NTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 20/267 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
+ +G G V H T ++ A+K++ + + ++ E+E L+ I Q +
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDI 176
+ E + I +++EY G L + SE + + QI+ ++Y+H HRD+
Sbjct: 76 VLE-TANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDL 134
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSY-----VGTCAYMSPERFDPDXXXXX 231
KP NLL + + ++K+ DFG +C Y G+ AY +PE
Sbjct: 135 KPENLLFDEYH-KLKLIDFG----LCAKPKGNKDYHLQTCCGSLAYAAPELIQ----GKS 185
Query: 232 XXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSF 291
D+WS G PF + +M +P SP
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG-----KYDVPKWLSPSSILL 240
Query: 292 IECCLQKEFSKRWTASQLLTHPFLCKN 318
++ LQ + KR + LL HP++ ++
Sbjct: 241 LQQMLQVDPKKRISMKNLLNHPWIMQD 267
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 59 LGHGNGGTVYK--VQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDSPFIVQCF 115
LG GN GTV K Q + K A+K++ +A DP ++ ++ E ++++ D+P+IV+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
GI E S ++ME + G L+ L +N + + + Q+ G+ YL +HRD
Sbjct: 438 GICEAES--WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRD 495
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSY--VGTCAYMSPERFDPDXXXXXXX 233
+ N+L+ + KI+DFG+SK +L A +Y T + + P+
Sbjct: 496 LAARNVLLVTQHY-AKISDFGLSK----ALRADENYYKAQTHGKWPVKWYAPECINYYKF 550
Query: 234 XXXXDIWS 241
D+WS
Sbjct: 551 SSKSDVWS 558
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++L++++VLG G GTVYK V T KI A+K+++ P + E I+
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D P +V+ G+ P+ I ++ + M G L+ + L + QI KG+ Y
Sbjct: 75 DHPHLVRLLGVCLSPT--IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 132
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV + N VKI DFG+++++
Sbjct: 133 LEERRLVHRDLAARNVLVKSPN-HVKITDFGLARLL 167
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 20/270 (7%)
Query: 58 VLGHGNGGTVYKV---QHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQC 114
+LG G+ G V +V + C + LK P V +E+++LRR ++Q
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 115 FGI-FEKPSGDIAILMEYMDSGT---LDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+ + + + ++MEY G LD++ K F + Q++ GL YLH
Sbjct: 72 VDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR--FPVCQAHGYFCQLIDGLEYLHSQG 129
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM--CRSLDACNSYVGTCAYMSPERFDPDXX 228
I+H+DIKP NLL+ +KI+ GV++ + + D C + G+ A+ PE +
Sbjct: 130 IVHKDIKPGNLLLTTGGT-LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN---G 185
Query: 229 XXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEF 288
DIWS G +PF + + L I G ++P P
Sbjct: 186 LDTFSGFKVDIWSAGVTLYNITTGLYPF----EGDNIYKLFENIGKGS-YAIPGDCGPPL 240
Query: 289 RSFIECCLQKEFSKRWTASQLLTHPFLCKN 318
++ L+ E +KR++ Q+ H + K
Sbjct: 241 SDLLKGMLEYEPAKRFSIRQIRQHSWFRKK 270
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 29/263 (11%)
Query: 68 YKVQHRCTHKI----YALKVV-HGDADPTVRRQVFREMEIL-RRTDSPFIVQCFGIFEKP 121
Y V RC HK +A+K++ DPT E+EIL R P I+ +++
Sbjct: 35 YSVCKRCIHKATNXEFAVKIIDKSKRDPT------EEIEILLRYGQHPNIITLKDVYDD- 87
Query: 122 SGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNL 181
+ ++ E G L + + FSE + + + I K + YLH ++HRD+KPSN+
Sbjct: 88 GKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNI 147
Query: 182 LV---NNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXD 238
L + N ++I DFG +K L A N + T Y + P+ D
Sbjct: 148 LYVDESGNPESIRICDFGFAK----QLRAENGLLXTPCYTA-NFVAPEVLERQGYDAACD 202
Query: 239 IWSXXXXXXXXXXGHFPFLQ-PGQRPDWATLMCAICFGDPPSLPDG----ASPEFRSFIE 293
IWS G+ PF P P+ ++ I G SL G S + +
Sbjct: 203 IWSLGVLLYTXLTGYTPFANGPDDTPE--EILARIGSGK-FSLSGGYWNSVSDTAKDLVS 259
Query: 294 CCLQKEFSKRWTASQLLTHPFLC 316
L + +R TA+ +L HP++
Sbjct: 260 KXLHVDPHQRLTAALVLRHPWIV 282
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 150 LHRDLKPSNLLL-NTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 57 QVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G G V + + K A+K + RR E I+ + D P I++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLHGHKII 172
G+ K S + I+ E M++G+LD+ L K + F+ +L + I G+ YL +
Sbjct: 111 LEGVVTK-SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXX 232
HRD+ N+L+ N+N+ K++DFG+S+++ +A +Y + P+
Sbjct: 170 HRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEA--AYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 XXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
D+WS + + G+RP W
Sbjct: 227 FTSASDVWSYGIVL-------WEVMSYGERPYW 252
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 104/261 (39%), Gaps = 43/261 (16%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFEKPSG----DIAILMEYMDSGTLDTLLNKNGTFSE 149
++ +RE+ +L+ ++ +F + + L+ ++ L+ ++ K ++
Sbjct: 95 KRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV-KCQKLTD 153
Query: 150 PKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACN 209
+ + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 154 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMT 209
Query: 210 SYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLM 269
YV T Y +PE DIWS G F PG
Sbjct: 210 GYVATRWYRAPEIM----LNWMHYNMTVDIWSVGCIMAELLTGRTLF--PGTDHINQLQQ 263
Query: 270 CAICFGDPP-----------------SLPD-----------GASPEFRSFIECCLQKEFS 301
G PP SLP GA+P +E L +
Sbjct: 264 IMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTD 323
Query: 302 KRWTASQLLTHPFLCKNRRSD 322
KR TAS+ L HP+ + D
Sbjct: 324 KRITASEALAHPYFSQYHDPD 344
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 18/271 (6%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTD--SPFIV 112
L+ +G G V++V + +IYA+K V+ +AD E+ L + S I+
Sbjct: 13 LKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 71
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
+ + +E I ++ME + L++ L K + + +L+ + +H H I+
Sbjct: 72 RLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 129
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPERFD------ 224
H D+KP+N L+ + +K+ DFG++ M + +S VGT YM PE
Sbjct: 130 HSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 187
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
+ D+WS G PF Q + + L I PD
Sbjct: 188 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLHAIIDPNHEIEFPDIP 245
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + ++CCL+++ +R + +LL HP++
Sbjct: 246 EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 276
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 146 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 18/271 (6%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTD--SPFIV 112
L+ +G G V++V + +IYA+K V+ +AD E+ L + S I+
Sbjct: 17 LKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 75
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
+ + +E I ++ME + L++ L K + + +L+ + +H H I+
Sbjct: 76 RLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 133
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPERFD------ 224
H D+KP+N L+ + +K+ DFG++ M + +S VGT YM PE
Sbjct: 134 HSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 191
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
+ D+WS G PF Q + + L I PD
Sbjct: 192 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLHAIIDPNHEIEFPDIP 249
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + ++CCL+++ +R + +LL HP++
Sbjct: 250 EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 280
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 18/271 (6%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTD--SPFIV 112
L+ +G G V++V + +IYA+K V+ +AD E+ L + S I+
Sbjct: 33 LKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 91
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
+ + +E I ++ME + L++ L K + + +L+ + +H H I+
Sbjct: 92 RLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPERFD------ 224
H D+KP+N L+ + +K+ DFG++ M + +S VGT YM PE
Sbjct: 150 HSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
+ D+WS G PF Q + + L I PD
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKLHAIIDPNHEIEFPDIP 265
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + ++CCL+++ +R + +LL HP++
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 89
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 148 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 22/273 (8%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTD--SPFIV 112
L+ +G G V++V + +IYA+K V+ +AD E+ L + S I+
Sbjct: 61 LKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLD--TLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+ + +E I ++ME G +D + L K + + +L+ + +H H
Sbjct: 120 RLYD-YEITDQYIYMVME---CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPERFD---- 224
I+H D+KP+N L+ + +K+ DFG++ M + +S VGT YM PE
Sbjct: 176 IVHSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 225 --PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPD 282
+ D+WS G PF Q + + L I PD
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLHAIIDPNHEIEFPD 291
Query: 283 GASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + ++CCL+++ +R + +LL HP++
Sbjct: 292 IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 36 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 95
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 153
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 154 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 146 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 6/195 (3%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
+ + DL + +G GN G V+ + R + + A+K P ++ + +E IL++
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK-LAHIASQILKGLSYL 166
P IV+ G+ + I I+ME + G T L G K L + G+ YL
Sbjct: 171 HPNIVRLIGVCTQKQ-PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
IHRD+ N LV N+ +KI+DFG+S+ D + G + + P+
Sbjct: 230 ESKCCIHRDLAARNCLVTEKNV-LKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPE 285
Query: 227 XXXXXXXXXXXDIWS 241
D+WS
Sbjct: 286 ALNYGRYSSESDVWS 300
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 53 LEKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
L+ L+ +G G G+V R K+ K+ R+ +RE+ +L+ +
Sbjct: 30 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 112 VQCFGIFEKPSGDIAILME-YMDSGTLDTLLN---KNGTFSEPKLAHIASQILKGLSYLH 167
+ +F P+ I E Y+ + + LN K+ S+ + + Q+L+GL Y+H
Sbjct: 90 IGLLDVF-TPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN+ VN ++ +++I DFG+++ ++ + YV T Y +PE
Sbjct: 149 SAGIIHRDLKPSNVAVNEDS-ELRILDFGLAR---QADEEMTGYVATRWYRAPE 198
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 13/183 (7%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVRRQVFREMEILRRTDSP 109
S EKL +G G G V+K +HR T + ALK V+ + RE++IL+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 110 FIVQCFGI-------FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
+V I + + I ++ ++ + L N F+ ++ + +L G
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC-NSY---VGTCAYM 218
L Y+H +KI+HRD+K +N+L+ + + +K+ADFG+++ + ++ N Y V T Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 219 SPE 221
PE
Sbjct: 197 PPE 199
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 110/254 (43%), Gaps = 23/254 (9%)
Query: 59 LGHGNGGTVYKVQHRCTHKI--YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG GN G+V + +R K A+KV+ + ++ RE +I+ + D+P+IV+ G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 117 IFEKPSGDIAILMEYMDSGTLDT-LLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+ + + + ++ME G L L+ K +A + Q+ G+ YL +HRD
Sbjct: 78 VCQAEA--LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNS-YVGTCAYMSPER-FDPDXXXXXXX 233
+ N+L+ N + KI+DFG+SK +L A +S Y A P + + P+
Sbjct: 136 LAARNVLLVNRHY-AKISDFGLSK----ALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 234 XXXXDIWSXXXXXXXXXXGHFPFLQPGQRP----DWATLMCAICFGDPPSLPDGASPEFR 289
D+WS + L GQ+P +M I G P PE
Sbjct: 191 SSRSDVWSYGVTM-------WEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELY 243
Query: 290 SFIECCLQKEFSKR 303
+ + C ++ R
Sbjct: 244 ALMSDCWIYKWEDR 257
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 144 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 165
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 166 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 151 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 34 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 93
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 151
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 152 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 25 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 84
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 142
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 143 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 150 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 144 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 18/271 (6%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTD--SPFIV 112
L+ +G G V++V + +IYA+K V+ +AD E+ L + S I+
Sbjct: 14 LKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 72
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
+ + +E I ++ME + L++ L K + + +L+ + +H H I+
Sbjct: 73 RLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 130
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPERFD------ 224
H D+KP+N L+ + +K+ DFG++ M + +S VGT YM PE
Sbjct: 131 HSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 188
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
+ D+WS G PF Q + + L I PD
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLHAIIDPNHEIEFPDIP 246
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + ++CCL+++ +R + +LL HP++
Sbjct: 247 EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
+LG G V++ +H+ T ++A+KV + + RE E+L++ + IV+ F I
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 118 FEKPSGDIAIL-MEYMDSGTLDTLLNKNGT---FSEPKLAHIASQILKGLSYLHGHKIIH 173
E+ + +L ME+ G+L T+L + E + + ++ G+++L + I+H
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135
Query: 174 RDIKPSNLL--VNNNNMQV-KIADFGVSKIMCRSLDACNSYV---GTCAYMSPERFDPDX 227
R+IKP N++ + + V K+ DFG + R L+ +V GT Y+ P+ ++
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAA----RELEDDEQFVSLYGTEEYLHPDMYERAV 191
Query: 228 XX---XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW-ATLMCAICFGDPPSLPDG 283
D+WS G PF +P + P +M I G P G
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPF-RPFEGPRRNKEVMYKIITGKPSGAISG 250
Query: 284 A 284
Sbjct: 251 V 251
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 18/265 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDA-DPTVRRQVFREMEILRRTDS-PFIVQCFG 116
LG G V + + T + YA K + R ++ E+ +L S P ++
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLL--NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHR 174
++E S +I +++EY G + +L SE + + QIL+G+ YLH + I+H
Sbjct: 97 VYENTS-EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHL 155
Query: 175 DIKPSNLLVNNNN--MQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE--RFDPDXXXX 230
D+KP N+L+++ +KI DFG+S+ + + + +GT Y++PE +DP
Sbjct: 156 DLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-LREIMGTPEYLAPEILNYDP----- 209
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
D+W+ PF+ + + + + S
Sbjct: 210 --ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI-SQVNVDYSEETFSSVSQLATD 266
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
FI+ L K KR TA L+H +L
Sbjct: 267 FIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 77
Query: 114 CFGIF-EKPSGDIAILMEYMDSG-TLDTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+MEYM G LD L + G + P+L +A+QI G++Y+
Sbjct: 78 LYAVVSEEP---IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 135 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 189 YGRFTIKSDVWS 200
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 6/195 (3%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
+ + DL + +G GN G V+ + R + + A+K P ++ + +E IL++
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK-LAHIASQILKGLSYL 166
P IV+ G+ + I I+ME + G T L G K L + G+ YL
Sbjct: 171 HPNIVRLIGVCTQKQ-PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
IHRD+ N LV N+ +KI+DFG+S+ D + G + + P+
Sbjct: 230 ESKCCIHRDLAARNCLVTEKNV-LKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPE 285
Query: 227 XXXXXXXXXXXDIWS 241
D+WS
Sbjct: 286 ALNYGRYSSESDVWS 300
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 117/271 (43%), Gaps = 18/271 (6%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTD--SPFIV 112
L+ +G G V++V + +IYA+K V+ +AD E+ L + S I+
Sbjct: 33 LKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 91
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
+ + +E I ++ME + L++ L K + + +L+ + +H H I+
Sbjct: 92 RLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPERFD------ 224
H D+KP+N L+ + +K+ DFG++ M +S VGT YM PE
Sbjct: 150 HSDLKPANFLIVDG--MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
+ D+WS G PF Q + + L I PD
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKLHAIIDPNHEIEFPDIP 265
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + ++CCL+++ +R + +LL HP++
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 9/156 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L++++ LG G+ G V Y + T + A+K + ++ + +E+EILR
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 70
Query: 109 PFIVQCFGIFEKPSGD-IAILMEYMDSGTLDTLL--NKNGTFSEPKLAHIASQILKGLSY 165
IV+ GI + G+ I ++ME++ SG+L L NKN + +L + A QI KG+ Y
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY-AVQICKGMDY 129
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L + +HRD+ N+LV + + QVKI DFG++K +
Sbjct: 130 LGSRQYVHRDLAARNVLVESEH-QVKIGDFGLTKAI 164
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 87/156 (55%), Gaps = 9/156 (5%)
Query: 53 LEKLQVLGHGNGGTV----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
L++++ LG G+ G V Y + T + A+K + ++ + +E+EILR
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 82
Query: 109 PFIVQCFGIFEKPSGD-IAILMEYMDSGTLDTLL--NKNGTFSEPKLAHIASQILKGLSY 165
IV+ GI + G+ I ++ME++ SG+L L NKN + +L + A QI KG+ Y
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY-AVQICKGMDY 141
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L + +HRD+ N+LV + + QVKI DFG++K +
Sbjct: 142 LGSRQYVHRDLAARNVLVESEH-QVKIGDFGLTKAI 176
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
+LG G V++ +H+ T ++A+KV + + RE E+L++ + IV+ F I
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 118 FEKPSGDIAIL-MEYMDSGTLDTLLNKNGT---FSEPKLAHIASQILKGLSYLHGHKIIH 173
E+ + +L ME+ G+L T+L + E + + ++ G+++L + I+H
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135
Query: 174 RDIKPSNLL--VNNNNMQV-KIADFGVSKIMCRSLDACNSYV---GTCAYMSPERFDPDX 227
R+IKP N++ + + V K+ DFG + R L+ +V GT Y+ P+ ++
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAA----RELEDDEQFVXLYGTEEYLHPDMYERAV 191
Query: 228 XX---XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW-ATLMCAICFGDPPSLPDG 283
D+WS G PF +P + P +M I G P G
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPF-RPFEGPRRNKEVMYKIITGKPSGAISG 250
Query: 284 A 284
Sbjct: 251 V 251
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 114/292 (39%), Gaps = 42/292 (14%)
Query: 56 LQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQC 114
LQ +G G G V V R K+ K+ ++ +RE+ +L+ ++
Sbjct: 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL 89
Query: 115 FGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+F D ++M +M GT L K+ E ++ + Q+LKGL Y+H
Sbjct: 90 LDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA 147
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
IIHRD+KP NL V N + ++KI DFG+++ ++ V T Y +PE
Sbjct: 148 GIIHRDLKPGNLAV-NEDCELKILDFGLAR---QADSEMXGXVVTRWYRAPEVI----LN 199
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPF--------------------------LQPGQRP 263
DIWS G F LQ +
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259
Query: 264 DWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
++ + + D S+ ASP + +E L + +R TA + L HP+
Sbjct: 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 14 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 70
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 71 LYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 127
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 128 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 181
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 182 YGRFTIKSDVWS 193
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 18/271 (6%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTD--SPFIV 112
L+ +G G V++V + +IYA+K V+ +AD E+ L + S I+
Sbjct: 61 LKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
+ + +E I ++ME + L++ L K + + +L+ + +H H I+
Sbjct: 120 RLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPERFD------ 224
H D+KP+N L+ + +K+ DFG++ M + +S VGT YM PE
Sbjct: 178 HSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
+ D+WS G PF Q + + L I PD
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLHAIIDPNHEIEFPDIP 293
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + ++CCL+++ +R + +LL HP++
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++M+ M G LD + L + QI KG++Y
Sbjct: 79 DNPHVCRLLGICL--TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 171
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++M+ M G L D + L + QI KG++Y
Sbjct: 76 DNPHVCRLLGICL--TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 168
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++M+ M G LD + L + QI KG++Y
Sbjct: 76 DNPHVCRLLGICL--TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 168
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A++ + T ++ RE++IL R I+
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 150 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 77
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I++EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 78 LYAVVSEEP---IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 135 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 189 YGRFTIKSDVWS 200
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++M+ M G LD + L + QI KG++Y
Sbjct: 75 DNPHVCRLLGICL--TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 167
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++M+ M G LD + L + QI KG++Y
Sbjct: 77 DNPHVCRLLGICL--TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 169
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 11/151 (7%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 11 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 67
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 68 LYAVVSEEP---IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 124
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+HRD++ +N+LV N+ K+ADFG+++++
Sbjct: 125 YVHRDLRAANILV-GENLVCKVADFGLARLI 154
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 243
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 244 LYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 301 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 354
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 355 YGRFTIKSDVWS 366
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++M+ M G LD + L + QI KG++Y
Sbjct: 78 DNPHVCRLLGIC--LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 170
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 243
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 244 LYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 301 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 354
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 355 YGRFTIKSDVWS 366
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 28/203 (13%)
Query: 59 LGHGNGGTVYKVQ--HRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LG G G V+ + + C + + A+K + DA R+ RE E+L IV+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLK-DASDNARKDFHREAELLTNLQHEHIVK 79
Query: 114 CFGIFEKPSGD-IAILMEYMDSGTLDTLLNKNG-------------TFSEPKLAHIASQI 159
+G+ + GD + ++ EYM G L+ L +G ++ ++ HIA QI
Sbjct: 80 FYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
G+ YL +HRD+ N LV N+ VKI DFG M R + + + Y M
Sbjct: 138 AAGMVYLASQHFVHRDLATRNCLV-GENLLVKIGDFG----MSRDVYSTDYYRVGGHTML 192
Query: 220 PERF-DPDXXXXXXXXXXXDIWS 241
P R+ P+ D+WS
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWS 215
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 55 KLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQC 114
+LQ +G G G V A+K + T ++ RE++IL R ++
Sbjct: 47 QLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGI 106
Query: 115 FGIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
I + D+ I+ + M++ L K+ S + + QIL+GL Y+H
Sbjct: 107 RDILRASTLEAMRDVYIVQDLMETDLYKLL--KSQQLSNDHICYFLYQILRGLKYIHSAN 164
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
++HRD+KPSNLL+ N +KI DFG+++I D V T Y +PE
Sbjct: 165 VLHRDLKPSNLLI-NTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 74
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM+ G+L D L + G + P+L +++QI G++Y+
Sbjct: 75 LYAVVSEEP---IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN 131
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 132 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 185
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 186 YGRFTIKSDVWS 197
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 28/268 (10%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGD--------ADPTVRRQVFREMEILRRTDSPF 110
LG G G V+ + +K +K + + DP + + V E+ IL R +
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK-VTLEIAILSRVEHAN 90
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGT-LDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
I++ IFE G ++ME SG L ++++ EP ++I Q++ + YL
Sbjct: 91 IIKVLDIFEN-QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK 149
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
IIHRDIK N+++ + +K+ DFG + + R ++ GT Y +PE
Sbjct: 150 DIIHRDIKDENIVI-AEDFTIKLIDFGSAAYLERG-KLFYTFCGTIEYCAPEVL----MG 203
Query: 230 XXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFR 289
++WS PF + + T+ AI PP L S E
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEENPFCELEE-----TVEAAI---HPPYL---VSKELM 252
Query: 290 SFIECCLQKEFSKRWTASQLLTHPFLCK 317
S + LQ +R T +L+T P++ +
Sbjct: 253 SLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
I L+ ++ LG+G G V+ K+ + G P E +I+++
Sbjct: 6 IPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP---ESFLEEAQIMKKLK 62
Query: 108 SPFIVQCFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNG-TFSEPKLAHIASQILKGLS 164
+VQ + + E+P I I+ EYM+ G+L D L + G P L +A+Q+ G++
Sbjct: 63 HDKLVQLYAVVSEEP---IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA 119
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
Y+ IHRD++ +N+LV N + KIADFG+++++
Sbjct: 120 YIERMNYIHRDLRSANILV-GNGLICKIADFGLARLI 155
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KCQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 150 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 326
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 327 LYAVVSEEP---IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 383
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 384 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 437
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 438 YGRFTIKSDVWS 449
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 10 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 66
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 67 LYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 123
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 124 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 177
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 178 YGRFTIKSDVWS 189
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 6/223 (2%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHG-DADPTVRRQVFRE-MEILRRTDS 108
D E ++V+G G G V V+ + T +IYA+K+++ + FRE ++L D
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLH 167
+I F+ + + ++M+Y G L TLL+K E +++ + +H
Sbjct: 150 QWITALHYAFQDEN-HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSY-VGTCAYMSPERFDPD 226
+HRDIKP N+L++ N +++ADFG M +S VGT Y+SPE
Sbjct: 209 QLHYVHRDIKPDNVLLDVNG-HIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLM 269
D WS G PF + +M
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 310
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 116/274 (42%), Gaps = 28/274 (10%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPK--------LAHI---ASQIL 160
G KP G + +++E+ G L T L +K F K L H+ + Q+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D YV P
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNV-VKIXDFGLARDIYKDPD----YVRKGDARLP 209
Query: 221 ERF-DPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICFGDPP 278
++ P+ D+WS G P+ PG + D + G
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFXRRLKEGTRM 266
Query: 279 SLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
PD +PE + C E S+R T S+L+ H
Sbjct: 267 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 6/223 (2%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHG-DADPTVRRQVFRE-MEILRRTDS 108
D E ++V+G G G V V+ + T +IYA+K+++ + FRE ++L D
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 109 PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK-NGTFSEPKLAHIASQILKGLSYLH 167
+I F+ + + ++M+Y G L TLL+K E +++ + +H
Sbjct: 134 QWITALHYAFQDEN-HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSY-VGTCAYMSPERFDPD 226
+HRDIKP N+L++ N +++ADFG M +S VGT Y+SPE
Sbjct: 193 QLHYVHRDIKPDNVLLDVNG-HIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 227 XXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLM 269
D WS G PF + +M
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 12 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 68
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 69 LYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 125
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 126 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 179
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 180 YGRFTIKSDVWS 191
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKIRHEKLVQ 77
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 78 LYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 135 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 189 YGRFTIKSDVWS 200
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL I+
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+N + +KI DFG++++ D YV T Y +PE
Sbjct: 148 LHRDLKPSNLLLNTTS-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 77
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 78 LYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 135 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 189 YGRFTIKSDVWS 200
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 53 LEKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
L+ L+ +G G G+V R K+ K+ R+ +RE+ +L+ +
Sbjct: 30 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 112 VQCFGIFEKPSGDIAILME-YMDSGTLDTLLN---KNGTFSEPKLAHIASQILKGLSYLH 167
+ +F P+ I E Y+ + + LN K S+ + + Q+L+GL Y+H
Sbjct: 90 IGLLDVF-TPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN+ VN ++ +++I DFG+++ ++ + YV T Y +PE
Sbjct: 149 SAGIIHRDLKPSNVAVNEDS-ELRILDFGLAR---QADEEMTGYVATRWYRAPE 198
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G+ P +E +++++ +VQ
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA---FLQEAQVMKKLRHEKLVQ 244
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 245 LYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 301
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+ +++ N Y P ++ P+
Sbjct: 302 YVHRDLRAANILV-GENLVCKVADFGLGRLI-----EDNEYTARQGAKFPIKWTAPEAAL 355
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 356 YGRFTIKSDVWS 367
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 243
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 244 LYAVVSEEP---IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 300
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 301 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 354
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 355 YGRFTIKSDVWS 366
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
S+L +Q +G G G V+ K+ A+K + A E E++ + P
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGA--MSEEDFIEEAEVMMKLSHPK 63
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+VQ +G+ + + I ++ E+M+ G L D L + G F+ L + + +G++YL
Sbjct: 64 LVQLYGVCLEQA-PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGT---CAYMSPERFDPD 226
+IHRD+ N LV N + +K++DFG+++ + D S GT + SPE F
Sbjct: 123 SVIHRDLAARNCLVGENQV-IKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEVFS-- 177
Query: 227 XXXXXXXXXXXDIWS 241
D+WS
Sbjct: 178 ---FSRYSSKSDVWS 189
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKI--YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
LG GN G+V + +R K A+KV+ + ++ RE +I+ + D+P+IV+ G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 117 IFEKPSGDIAILMEYMDSGTLDT-LLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
+ + + + ++ME G L L+ K +A + Q+ G+ YL +HR+
Sbjct: 404 VCQAEA--LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN 461
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNS-YVGTCAYMSPER-FDPDXXXXXXX 233
+ N+L+ N + KI+DFG+SK +L A +S Y A P + + P+
Sbjct: 462 LAARNVLLVNRHY-AKISDFGLSK----ALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 234 XXXXDIWS 241
D+WS
Sbjct: 517 SSRSDVWS 524
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 116/274 (42%), Gaps = 28/274 (10%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPK--------LAHI---ASQIL 160
G KP G + +++E+ G L T L +K F K L H+ + Q+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D YV P
Sbjct: 155 KGMEFLASRKXIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPD----YVRKGDARLP 209
Query: 221 ERF-DPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICFGDPP 278
++ P+ D+WS G P+ PG + D + G
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKEGTRM 266
Query: 279 SLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
PD +PE + C E S+R T S+L+ H
Sbjct: 267 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 77
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I++EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 78 LYAVVSEEP---IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+HRD++ +N+LV N+ K+ADFG+++++
Sbjct: 135 YVHRDLRAANILV-GENLVCKVADFGLARLI 164
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++M+ M G LD + L + QI KG++Y
Sbjct: 79 DNPHVCRLLGICL--TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG +K++
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLL 171
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 74
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM+ G+L D L + G + P+L +++QI G++Y+
Sbjct: 75 LYAVVSEEP---IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN 131
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+HRD++ +N+LV N+ K+ADFG+++++
Sbjct: 132 YVHRDLRAANILV-GENLVCKVADFGLARLI 161
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++M+ M G LD + L + QI KG++Y
Sbjct: 77 DNPHVCRLLGICL--TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG +K++
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLL 169
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE-----V 196
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP-PSLPDGASP 286
DIWS G F W ++ + G P P P
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL--GTPSPEFMKKLQP 254
Query: 287 EFRSFIE 293
R+++E
Sbjct: 255 TVRTYVE 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 77
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 78 LYAVVSEEP---IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 135 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 189 YGRFTIKSDVWS 200
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL I+
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 148 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ ++ M + L K S + + QIL+GL Y+H +
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLMGADLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 165
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC---NSYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D YV T Y +PE
Sbjct: 166 LHRDLKPSNLLL-NTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++M+ M G LD + L + QI KG++Y
Sbjct: 77 DNPHVCRLLGIC--LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG +K++
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLL 169
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 117/271 (43%), Gaps = 18/271 (6%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVH-GDADPTVRRQVFREMEILRRTD--SPFIV 112
L+ +G G V++V + +IYA+K V+ +AD E+ L + S I+
Sbjct: 61 LKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
+ + +E I ++ME + L++ L K + + +L+ + +H H I+
Sbjct: 120 RLYD-YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPERFD------ 224
H D+KP+N L+ + +K+ DFG++ M + +S VG YM PE
Sbjct: 178 HSDLKPANFLIVDG--MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR 235
Query: 225 PDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGA 284
+ D+WS G PF Q + + L I PD
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLHAIIDPNHEIEFPDIP 293
Query: 285 SPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ + ++CCL+++ +R + +LL HP++
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 77
Query: 114 CFGIF-EKPSGDIAILMEYMDSG-TLDTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G LD L + G + P+L +A+QI G++Y+
Sbjct: 78 LYAVVSEEP---IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD++ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 135 YVHRDLRAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 189 YGRFTIKSDVWS 200
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 17/192 (8%)
Query: 55 KLQV-LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+L+V LG G G V+ T ++ + G P +E +++++ +VQ
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMKKLRHEKLVQ 77
Query: 114 CFGIF-EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHK 170
+ + E+P I I+ EYM G+L D L + G + P+L +A+QI G++Y+
Sbjct: 78 LYAVVSEEP---IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN 134
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD+ +N+LV N+ K+ADFG+++++ N Y P ++ P+
Sbjct: 135 YVHRDLAAANILV-GENLVCKVADFGLARLI-----EDNEYTARQGAKFPIKWTAPEAAL 188
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 189 YGRFTIKSDVWS 200
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 119/312 (38%), Gaps = 60/312 (19%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDA----DPTVRRQVFREMEILRRTDSPFIVQ 113
+G G+ G V T I A+K+++ + +P ++ E+ ++++ P I +
Sbjct: 33 AIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR 92
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNK-----------------------------N 144
+ ++E I ++ME G L LN N
Sbjct: 93 LYEVYEDEQY-ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 145 GTF-----------SEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNN-NMQVKI 192
G+ E +++I QI L YLH I HRDIKP N L + N + ++K+
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKL 211
Query: 193 ADFGVSKIMCR----SLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXX 248
DFG+SK + + GT +++PE + D WS
Sbjct: 212 VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLN---TTNESYGPKCDAWSAGVLLHL 268
Query: 249 XXXGHFPFLQPGQRPD---WATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWT 305
G PF PG L +CF +P + SP R + L + +R+
Sbjct: 269 LLMGAVPF--PGVNDADTISQVLNKKLCFENPNY--NVLSPLARDLLSNLLNRNVDERFD 324
Query: 306 ASQLLTHPFLCK 317
A + L HP++ +
Sbjct: 325 AMRALQHPWISQ 336
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 13/134 (9%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K+ +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KSQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCR-SLDA 207
+ + + QIL+GL Y+H IIHRD+KPSNL VN ++ ++KI DFG +CR + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS-ELKILDFG----LCRHTDDE 178
Query: 208 CNSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 179 MTGYVATRWYRAPE 192
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 10/174 (5%)
Query: 53 LEKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
L+ L+ +G G G+V R K+ K+ R+ +RE+ +L+ +
Sbjct: 22 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 112 VQCFGIFEKPSGDIAILME-YMDSGTLDTLLN---KNGTFSEPKLAHIASQILKGLSYLH 167
+ +F P+ I E Y+ + + LN K S+ + + Q+L+GL Y+H
Sbjct: 82 IGLLDVF-TPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN+ V N + +++I DFG+++ ++ + YV T Y +PE
Sbjct: 141 SAGIIHRDLKPSNVAV-NEDCELRILDFGLAR---QADEEMTGYVATRWYRAPE 190
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
S+L +Q +G G G V+ + + A+K + A E E++ + P
Sbjct: 10 SELTFVQEIGSGQFGLVH-LGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPK 66
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+VQ +G+ + + I ++ E+M+ G L D L + G F+ L + + +G++YL
Sbjct: 67 LVQLYGVCLEQA-PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGT---CAYMSPERFDPD 226
+IHRD+ N LV N + +K++DFG+++ + D S GT + SPE F
Sbjct: 126 CVIHRDLAARNCLVGENQV-IKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEVFS-- 180
Query: 227 XXXXXXXXXXXDIWS 241
D+WS
Sbjct: 181 ---FSRYSSKSDVWS 192
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
S+L +Q +G G G V+ K+ A+K + A E E++ + P
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGA--MSEEDFIEEAEVMMKLSHPK 61
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+VQ +G+ + + I ++ E+M+ G L D L + G F+ L + + +G++YL
Sbjct: 62 LVQLYGVCLEQA-PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGT---CAYMSPERFDPD 226
+IHRD+ N LV N + +K++DFG+++ + D S GT + SPE F
Sbjct: 121 CVIHRDLAARNCLVGENQV-IKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEVFS-- 175
Query: 227 XXXXXXXXXXXDIWS 241
D+WS
Sbjct: 176 ---FSRYSSKSDVWS 187
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 85 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 177
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
S+L +Q +G G G V+ + + A+K + A E E++ + P
Sbjct: 7 SELTFVQEIGSGQFGLVH-LGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPK 63
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+VQ +G+ + + I ++ E+M+ G L D L + G F+ L + + +G++YL
Sbjct: 64 LVQLYGVCLEQA-PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGT---CAYMSPERFDPD 226
+IHRD+ N LV N + +K++DFG+++ + D S GT + SPE F
Sbjct: 123 CVIHRDLAARNCLVGENQV-IKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEVFS-- 177
Query: 227 XXXXXXXXXXXDIWS 241
D+WS
Sbjct: 178 ---FSRYSSKSDVWS 189
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 116/278 (41%), Gaps = 34/278 (12%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPK----------LAHI---ASQ 158
G KP G + +++E+ G L T L +K F K L H+ + Q
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 159 ILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGT--CA 216
+ KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 217 YMSPER-FDPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICF 274
+M+PE FD D+WS G P+ PG + D +
Sbjct: 216 WMAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKE 266
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
G PD +PE + C E S+R T S+L+ H
Sbjct: 267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G L D + L + QI KG++Y
Sbjct: 75 DNPHVCRLLGICL--TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 167
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 75 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 167
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACN---SYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D V T Y +PE
Sbjct: 150 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
S+L +Q +G G G V+ + + A+K + A E E++ + P
Sbjct: 8 SELTFVQEIGSGQFGLVH-LGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPK 64
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+VQ +G+ + + I ++ E+M+ G L D L + G F+ L + + +G++YL
Sbjct: 65 LVQLYGVCLEQA-PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGT---CAYMSPERFDPD 226
+IHRD+ N LV N + +K++DFG+++ + D S GT + SPE F
Sbjct: 124 CVIHRDLAARNCLVGENQV-IKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEVFS-- 178
Query: 227 XXXXXXXXXXXDIWS 241
D+WS
Sbjct: 179 ---FSRYSSKSDVWS 190
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 75 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 167
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L +G G G V A+K + T ++ RE++IL R I+
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I P+ D+ I+ + M++ L K S + + QIL+GL Y+H +
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACN---SYVGTCAYMSPE 221
+HRD+KPSNLL+ N +KI DFG++++ D V T Y +PE
Sbjct: 151 LHRDLKPSNLLL-NTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 77 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 169
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 78 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 170
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VL G GTVYK + KI A+K + P +++ E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++M+ M G LD + L + QI KG++Y
Sbjct: 82 DNPHVCRLLGIC--LTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 174
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 78 DNPHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 170
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 69 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 161
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE-----V 196
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP-PSLPDGASP 286
DIWS G F W ++ + G P P P
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL--GTPSPEFMKKLQP 254
Query: 287 EFRSFIE 293
R+++E
Sbjct: 255 TVRTYVE 261
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 78 DNPHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 170
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 82 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 174
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 81 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 173
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 100 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 192
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KXQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDXELKILDFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 41/278 (14%)
Query: 57 QVLGHGNGGTVYK-----VQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
+ LG G G V K ++ R + A+K++ +A P+ R + E +L++ + P +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNG------------------------TF 147
++ +G + G + +++EY G+L L ++
Sbjct: 89 IKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 148 SEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA 207
+ L A QI +G+ YL K++HRD+ N+LV ++KI+DFG+S R +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR-KMKISDFGLS----RDVYE 202
Query: 208 CNSYVGTCAYMSPERFDP-DXXXXXXXXXXXDIWS-XXXXXXXXXXGHFPFLQPGQRPDW 265
+SYV P ++ + D+WS G P+ PG P+
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPPE- 259
Query: 266 ATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKR 303
L + G PD S E + C ++E KR
Sbjct: 260 -RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 30/277 (10%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLA------------HI---A 156
G KP G + +++E+ G L T L +K F K+A H+ +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
Q+ KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D A
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRK---GDA 201
Query: 217 YMSPERFDPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICFG 275
+ + P+ D+WS G P+ PG + D + G
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKEG 258
Query: 276 DPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
PD +PE + C E S+R T S+L+ H
Sbjct: 259 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 59 LGHGNGGTVYKVQ--HRCTHKIYALKVVHGDADPTV--RRQVFREMEILRRTDSPFIVQC 114
LG G G V+ + + K L V DPT+ R+ RE E+L IV+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 115 FGIFEKPSGD-IAILMEYMDSGTLDTLLNKNG------TFSEPKLA----------HIAS 157
+G+ GD + ++ EYM G L+ L +G +P+ A HIAS
Sbjct: 83 YGVC--GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 158 QILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAY 217
QI G+ YL +HRD+ N LV N+ VKI DFG M R + + + Y
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLV-GANLLVKIGDFG----MSRDVYSTDYYRVGGHT 195
Query: 218 MSPERF-DPDXXXXXXXXXXXDIWS 241
M P R+ P+ D+WS
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWS 220
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 30/277 (10%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLA------------HI---A 156
G KP G + +++E+ G L T L +K F K+A H+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
Q+ KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D A
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRK---GDA 210
Query: 217 YMSPERFDPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICFG 275
+ + P+ D+WS G P+ PG + D + G
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKEG 267
Query: 276 DPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
PD +PE + C E S+R T S+L+ H
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 117/278 (42%), Gaps = 32/278 (11%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLA------------HI---A 156
G KP G + +++E+ G L T L +K F K+A H+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
Q+ KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D YV
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPD----YVRKGD 209
Query: 217 YMSPERF-DPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICF 274
P ++ P+ D+WS G P+ PG + D +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKE 266
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
G PD +PE + C E S+R T S+L+ H
Sbjct: 267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 117/278 (42%), Gaps = 32/278 (11%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLA------------HI---A 156
G KP G + +++E+ G L T L +K F K+A H+ +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
Q+ KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D YV
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPD----YVRKGD 246
Query: 217 YMSPERF-DPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICF 274
P ++ P+ D+WS G P+ PG + D +
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKE 303
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
G PD +PE + C E S+R T S+L+ H
Sbjct: 304 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE-----V 196
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP-PSLPDGASP 286
DIWS G F W ++ + G P P P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL--GTPSPEFMKKLQP 254
Query: 287 EFRSFIE 293
R+++E
Sbjct: 255 TVRTYVE 261
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 21 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCAKLTDDHVQFLIYQILRGLKYIH 138
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DFG+++ + D YV T Y +PE
Sbjct: 139 SADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPE 188
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL----NKNGTFSEPK--------LAHI---AS 157
G KP G + +++E+ G L T L N+ + P+ L H+ +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 158 QILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAY 217
Q+ KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D A
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRK---GDAR 211
Query: 218 MSPERFDPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICFGD 276
+ + P+ D+WS G P+ PG + D + G
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKEGT 268
Query: 277 PPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
PD +PE + C E S+R T S+L+ H
Sbjct: 269 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 28/224 (12%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR---QVFREMEILR 104
I +++L +++G G G VY+ A+K D D + + V +E ++
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 105 RTDSPFIVQCFGI-FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK-LAHIASQILKG 162
P I+ G+ ++P ++ ++ME+ G L+ +L+ G P L + A QI +G
Sbjct: 62 MLKHPNIIALRGVCLKEP--NLCLVMEFARGGPLNRVLS--GKRIPPDILVNWAVQIARG 117
Query: 163 LSYLHGHKI---IHRDIKPSNLLV-------NNNNMQVKIADFGVSKIMCRSLDACNSYV 212
++YLH I IHRD+K SN+L+ + +N +KI DFG+++ R+ S
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM--SAA 175
Query: 213 GTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPF 256
G A+M+PE D+WS G PF
Sbjct: 176 GAYAWMAPEVI-----RASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
+L+ LQ +G G G V +R A+K + DA + E ++ + +
Sbjct: 13 ELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDA---TAQAFLAEASVMTQLRHSNL 67
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGH 169
VQ G+ + G + I+ EYM G+L L G L + + + + YL G+
Sbjct: 68 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 127
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+HRD+ N+LV+ +N+ K++DFG++K + D V A P+
Sbjct: 128 NFVHRDLAARNVLVSEDNV-AKVSDFGLTKEASSTQDTGKLPVKWTA--------PEALR 178
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 179 EAAFSTKSDVWS 190
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 70
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I++E+M G L L + S L ++A+QI + YL
Sbjct: 71 LVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 130 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAPES 183
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 184 LAYNKFSIKSDVWA 197
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 70
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I++E+M G L L + S L ++A+QI + YL
Sbjct: 71 LVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 130 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAPES 183
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 184 LAYNKFSIKSDVWA 197
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 115/277 (41%), Gaps = 30/277 (10%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLA------------HI---A 156
G KP G + +++E+ G L T L +K F K+A H+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
Q+ KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D A
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDXVRK---GDA 210
Query: 217 YMSPERFDPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICFG 275
+ + P+ D+WS G P+ PG + D + G
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKEG 267
Query: 276 DPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
PD +PE + C E S+R T S+L+ H
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 116/278 (41%), Gaps = 32/278 (11%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLA------------HI---A 156
G KP G + ++ E+ G L T L +K F K+A H+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
Q+ KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D YV
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPD----YVRKGD 200
Query: 217 YMSPERF-DPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICF 274
P ++ P+ D+WS G P+ PG + D +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKE 257
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
G PD +PE + C E S+R T S+L+ H
Sbjct: 258 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 116/278 (41%), Gaps = 32/278 (11%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLA------------HI---A 156
G KP G + ++ E+ G L T L +K F K+A H+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
Q+ KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D YV
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPD----YVRKGD 200
Query: 217 YMSPERF-DPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICF 274
P ++ P+ D+WS G P+ PG + D +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKE 257
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
G PD +PE + C E S+R T S+L+ H
Sbjct: 258 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 103/261 (39%), Gaps = 21/261 (8%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
+L+ LQ +G G G V +R A+K + DA + E ++ + +
Sbjct: 194 ELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDA---TAQAFLAEASVMTQLRHSNL 248
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGH 169
VQ G+ + G + I+ EYM G+L L G L + + + + YL G+
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+HRD+ N+LV+ +N+ K++DFG++K + D V A P+
Sbjct: 309 NFVHRDLAARNVLVSEDNV-AKVSDFGLTKEASSTQDTGKLPVKWTA--------PEALR 359
Query: 230 XXXXXXXXDIWS-XXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEF 288
D+WS G P+ R ++ + G PDG P
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGRVPY----PRIPLKDVVPRVEKGYKMDAPDGCPPAV 415
Query: 289 RSFIECCLQKEFSKRWTASQL 309
++ C + + R T QL
Sbjct: 416 YDVMKNCWHLDAATRPTFLQL 436
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 129
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL VN ++ ++KI DFG+++ + D
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS-ELKILDFGLAR---HTDDEM 185
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 186 TGYVATRWYRAPE 198
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 125
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL VN ++ ++KI DFG+++ + D
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS-ELKILDFGLAR---HTDDEM 181
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 182 TGYVATRWYRAPE 194
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 77 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG +K++
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLL 169
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 195
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 75 DNPHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG +K++
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLL 167
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 68
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I++E+M G L L + S L ++A+QI + YL
Sbjct: 69 LVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC 202
IHRD+ N LV N++ VK+ADFG+S++M
Sbjct: 128 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT 160
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 9/177 (5%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVRRQVFREMEILRR-TDSPFI 111
E ++ LG G G V+K R T ++ A+K + + T ++ FRE+ IL + I
Sbjct: 12 ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI 71
Query: 112 VQCFGIFEKPSG-DIAILMEYMDSGTLDTLLNKNGTFSEP-KLAHIASQILKGLSYLHGH 169
V + + D+ ++ +YM++ L ++ N EP ++ Q++K + YLH
Sbjct: 72 VNLLNVLRADNDRDVYLVFDYMETD-LHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPD 226
++HRD+KPSN+L+ N VK+ADFG+S+ N+ + + E FD D
Sbjct: 129 GLLHRDMKPSNILL-NAECHVKVADFGLSRSFVNIRRVTNN-IPLSINENTENFDDD 183
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 114/277 (41%), Gaps = 30/277 (10%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLA------------HI---A 156
G KP G + ++ E+ G L T L +K F K+A H+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
Q+ KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D A
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRK---GDA 201
Query: 217 YMSPERFDPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICFG 275
+ + P+ D+WS G P+ PG + D + G
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKEG 258
Query: 276 DPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
PD +PE + C E S+R T S+L+ H
Sbjct: 259 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
S+L +Q +G G G V+ K+ + G E E++ + P
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS---EDDFIEEAEVMMKLSHPK 83
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+VQ +G+ + + I ++ E+M+ G L D L + G F+ L + + +G++YL
Sbjct: 84 LVQLYGVCLEQA-PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGT---CAYMSPERFDPD 226
+IHRD+ N LV N + +K++DFG+++ + D S GT + SPE F
Sbjct: 143 CVIHRDLAARNCLVGENQV-IKVSDFGMTRFVLD--DQYTSSTGTKFPVKWASPEVFS-- 197
Query: 227 XXXXXXXXXXXDIWS 241
D+WS
Sbjct: 198 ---FSRYSSKSDVWS 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 11/197 (5%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYK---VQHRCTHKIYALKVVHGDADPTVRRQVFREMEILR 104
IA D+ ++LG G G VY+ H+ A+K D + + E I++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGL 163
D P IV+ GI E+ I+ME G L L +N + L + QI K +
Sbjct: 65 NLDHPHIVKLIGIIEEEP--TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 122
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL +HRDI N+LV + VK+ DFG+S R ++ + Y + + +
Sbjct: 123 AYLESINCVHRDIAVRNILVASPEC-VKLGDFGLS----RYIEDEDYYKASVTRLPIKWM 177
Query: 224 DPDXXXXXXXXXXXDIW 240
P+ D+W
Sbjct: 178 SPESINFRRFTTASDVW 194
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KXQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
+L+ LQ +G G G V +R A+K + DA + E ++ + +
Sbjct: 7 ELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDATA---QAFLAEASVMTQLRHSNL 61
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGH 169
VQ G+ + G + I+ EYM G+L L G L + + + + YL G+
Sbjct: 62 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 121
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+HRD+ N+LV+ +N+ K++DFG++K + D V A P+
Sbjct: 122 NFVHRDLAARNVLVSEDNV-AKVSDFGLTKEASSTQDTGKLPVKWTA--------PEALR 172
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 173 EKKFSTKSDVWS 184
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
+L+ LQ +G G G V +R A+K + DA + E ++ + +
Sbjct: 22 ELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDATA---QAFLAEASVMTQLRHSNL 76
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNG--TFSEPKLAHIASQILKGLSYLHGH 169
VQ G+ + G + I+ EYM G+L L G L + + + + YL G+
Sbjct: 77 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXX 229
+HRD+ N+LV+ +N+ K++DFG++K + D V A P+
Sbjct: 137 NFVHRDLAARNVLVSEDNV-AKVSDFGLTKEASSTQDTGKLPVKWTA--------PEALR 187
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 188 EKKFSTKSDVWS 199
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 116/278 (41%), Gaps = 32/278 (11%)
Query: 59 LGHGNGGTV-----YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF-IV 112
LG G G V + + T + A+K++ A + R + E++IL +V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPK------------LAHI---A 156
G KP G + +++E+ G L T L +K F K L H+ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
Q+ KG+ +L K IHRD+ N+L++ N+ VKI DFG+++ + + D YV
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPD----YVRKGD 211
Query: 217 YMSPERF-DPDXXXXXXXXXXXDIWSXXXXX-XXXXXGHFPFLQPGQRPDWATLMCAICF 274
P ++ P+ D+WS G P+ PG + D +
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY--PGVKID-EEFCRRLKE 268
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTH 312
G PD +PE + C E S+R T S+L+ H
Sbjct: 269 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI +G++Y
Sbjct: 72 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 164
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 11/197 (5%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYK---VQHRCTHKIYALKVVHGDADPTVRRQVFREMEILR 104
IA D+ ++LG G G VY+ H+ A+K D + + E I++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGL 163
D P IV+ GI E+ I+ME G L L +N + L + QI K +
Sbjct: 69 NLDHPHIVKLIGIIEEEP--TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 126
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL +HRDI N+LV + VK+ DFG+S R ++ + Y + + +
Sbjct: 127 AYLESINCVHRDIAVRNILVASPEC-VKLGDFGLS----RYIEDEDYYKASVTRLPIKWM 181
Query: 224 DPDXXXXXXXXXXXDIW 240
P+ D+W
Sbjct: 182 SPESINFRRFTTASDVW 198
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 11/197 (5%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYK---VQHRCTHKIYALKVVHGDADPTVRRQVFREMEILR 104
IA D+ ++LG G G VY+ H+ A+K D + + E I++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-GTFSEPKLAHIASQILKGL 163
D P IV+ GI E+ I+ME G L L +N + L + QI K +
Sbjct: 81 NLDHPHIVKLIGIIEEEP--TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 138
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL +HRDI N+LV + VK+ DFG+S R ++ + Y + + +
Sbjct: 139 AYLESINCVHRDIAVRNILVASPEC-VKLGDFGLS----RYIEDEDYYKASVTRLPIKWM 193
Query: 224 DPDXXXXXXXXXXXDIW 240
P+ D+W
Sbjct: 194 SPESINFRRFTTASDVW 210
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+K + P +++ E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 82 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG +K++
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGRAKLL 174
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 17/182 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 20 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 71
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQI 159
IV+ F +K + ++++Y+ + + + ++ Q+
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
+ L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + SY+ + Y +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRA 190
Query: 220 PE 221
PE
Sbjct: 191 PE 192
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 130
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTADEM 186
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 187 TGYVATRWYRAPE 199
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 7/156 (4%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR-RQVFREMEILRRTDSPFIVQCF 115
++G G+ G VY + T K A+K V+ + + +++ RE+ IL R S +I++ +
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLY 91
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
+ ++ I++E DS L L +E + I +L G +++H I
Sbjct: 92 DLIIPDDLLKFDELYIVLEIADSD-LKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGI 150
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA 207
IHRD+KP+N L+ N + VK+ DFG+++ + D
Sbjct: 151 IHRDLKPANCLL-NQDCSVKVCDFGLARTINSEKDT 185
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE-----V 196
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP-PSLPDGASP 286
DIWS G F W ++ + G P P P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL--GTPSPEFMKKLQP 254
Query: 287 EFRSFIE 293
R+++E
Sbjct: 255 TVRTYVE 261
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 128
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDXELKILDFGLAR---HTDDEM 184
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 185 TGYVATRWYRAPE 197
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 134
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 135 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDXELKILDFGLAR---HTDDEM 190
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 191 TGYVATRWYRAPE 203
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFEKPSGDI-----AILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F P+ + L+ ++ L+ ++ K +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLT 130
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTADEM 186
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 187 TGYVATRWYRAPE 199
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 128
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDXELKILDFGLAR---HTDDEM 184
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 185 TGYVATRWYRAPE 197
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 21 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DFG+++ + D YV T Y +PE
Sbjct: 139 SADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPE 188
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DFG+++ + D YV T Y +PE
Sbjct: 143 SADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPE 192
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFEKPSGDI-----AILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F P+ + L+ ++ L+ ++ K +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVF-TPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLT 130
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTADEM 186
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 187 TGYVATRWYRAPE 199
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 70
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + S L ++A+QI + YL
Sbjct: 71 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 130 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAPES 183
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 184 LAYNKFSIKSDVWA 197
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 70
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + S L ++A+QI + YL
Sbjct: 71 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 130 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAPES 183
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 184 LAYNKFSIKSDVWA 197
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 75
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + S L ++A+QI + YL
Sbjct: 76 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 134
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 135 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAPES 188
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 189 LAYNKFSIKSDVWA 202
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 35 QNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 94
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 95 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIH 152
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DFG+++ + D YV T Y +PE
Sbjct: 153 SADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPE 202
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 17/182 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 33 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 84
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQI 159
IV+ F +K + ++++Y+ + + + ++ Q+
Sbjct: 85 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 144
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
+ L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + SY+ + Y +
Sbjct: 145 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRA 203
Query: 220 PE 221
PE
Sbjct: 204 PE 205
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 44 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 103
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIH 161
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DFG+++ + D YV T Y +PE
Sbjct: 162 SADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPE 211
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VLG G GTVYK + KI A+ + P +++ E ++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 109 DNPHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 166
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 167 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 201
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 35/180 (19%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCT-----HKIYALKVVHGDADPTVRRQVFREMEILRR 105
+++E ++ +G G G V++ + + A+K++ +A ++ RE ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 106 TDSPFIVQCFGI--FEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAH--------- 154
D+P IV+ G+ KP + +L EYM G L+ L + L+H
Sbjct: 107 FDNPNIVKLLGVCAVGKP---MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 155 ---------------IASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSK 199
IA Q+ G++YL K +HRD+ N LV NM VKIADFG+S+
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV-GENMVVKIADFGLSR 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 45 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DFG+++ + D YV T Y +PE
Sbjct: 163 SADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPE 212
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE-----V 196
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP-PSLPDGASP 286
DIWS G F W ++ + G P P P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL--GTPCPEFMKKLQP 254
Query: 287 EFRSFIE 293
R+++E
Sbjct: 255 TVRTYVE 261
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 68
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + S L ++A+QI + YL
Sbjct: 69 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC 202
IHRD+ N LV N++ VK+ADFG+S++M
Sbjct: 128 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT 160
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 25/186 (13%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 48 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 99
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK-------LAHI 155
IV+ F +K + ++++Y+ +T+ +S K +
Sbjct: 100 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLY 155
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTC 215
Q+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + SY+ +
Sbjct: 156 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSR 214
Query: 216 AYMSPE 221
Y +PE
Sbjct: 215 YYRAPE 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 31 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIH 148
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DFG+++ + D YV T Y +PE
Sbjct: 149 SADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMTGYVATRWYRAPE 198
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 25/186 (13%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 54 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 105
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK-------LAHI 155
IV+ F +K + ++++Y+ +T+ +S K +
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLY 161
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTC 215
Q+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + SY+ +
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSR 220
Query: 216 AYMSPE 221
Y +PE
Sbjct: 221 YYRAPE 226
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
L+ LG G G V + + + + + G + F+E + + + P +V+ +
Sbjct: 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFY 69
Query: 116 GIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEP-KLAHIASQILKGLSYLHGHKIIHR 174
G+ K I I+ EY+ +G L L +G EP +L + + +G+++L H+ IHR
Sbjct: 70 GVCSKEY-PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR 128
Query: 175 DIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXXXXXX 233
D+ N LV + ++ VK++DFG+++ + LD + YV + P ++ P+
Sbjct: 129 DLAARNCLV-DRDLCVKVSDFGMTRYV---LD--DQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 234 XXXXDIWS 241
D+W+
Sbjct: 183 SSKSDVWA 190
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VL G GTVYK + KI A+K + P +++ E ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 75 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 167
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 97/187 (51%), Gaps = 27/187 (14%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 56 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 107
Query: 108 SPFIVQCFGIFEKPSGD------IAILMEYMDSGTLDTLLNKNGTFSEPK-------LAH 154
IV+ F SG+ + ++++Y+ +T+ +S K +
Sbjct: 108 HCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKL 162
Query: 155 IASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGT 214
Q+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + SY+ +
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICS 221
Query: 215 CAYMSPE 221
Y +PE
Sbjct: 222 RYYRAPE 228
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 106/263 (40%), Gaps = 47/263 (17%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPG-QRPDWAT 267
YV T Y +PE DIWS G F PG D
Sbjct: 180 TGYVATRWYRAPEIM----LNAMHYNQTVDIWSVGCIMAELLTGRTLF--PGTDHIDQLK 233
Query: 268 LMCAICFGDPPS--------------------LPD--------GASPEFRSFIECCLQKE 299
L+ + G P + +P GA+P +E L +
Sbjct: 234 LILRLV-GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 300 FSKRWTASQLLTHPFLCKNRRSD 322
KR TA+Q L H + + D
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPD 315
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 88 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 144
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 145 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE-----V 197
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP-PSLPDGASP 286
DIWS G F W ++ + G P P P
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL--GTPCPEFMKKLQP 255
Query: 287 EFRSFIE 293
R+++E
Sbjct: 256 TVRTYVE 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 68
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + S L ++A+QI + YL
Sbjct: 69 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC 202
IHRD+ N LV N++ VK+ADFG+S++M
Sbjct: 128 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT 160
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 25/186 (13%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 58 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 109
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK-------LAHI 155
IV+ F +K + ++++Y+ +T+ +S K +
Sbjct: 110 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLY 165
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTC 215
Q+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + SY+ +
Sbjct: 166 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSR 224
Query: 216 AYMSPE 221
Y +PE
Sbjct: 225 YYRAPE 230
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 75
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I++E+M G L L + + L ++A+QI + YL
Sbjct: 76 LVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 135 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 188
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 189 LAYNKFSIKSDVWA 202
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Query: 91 TVRRQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNG 145
T ++ +RE+ +L+ + I+ +F + D+ ++ME MD+ + +
Sbjct: 65 THAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HM 121
Query: 146 TFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSL 205
+++++ Q+L G+ +LH IIHRD+KPSN++V ++ +KI DFG+++ C +
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTACTNF 180
Query: 206 DACNSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 181 -MMTPYVVTRYYRAPE 195
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 25/186 (13%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 25 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 76
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK-------LAHI 155
IV+ F +K + ++++Y+ +T+ +S K +
Sbjct: 77 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLY 132
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTC 215
Q+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + SY+ +
Sbjct: 133 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSR 191
Query: 216 AYMSPE 221
Y +PE
Sbjct: 192 YYRAPE 197
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE-----V 196
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP-PSLPDGASP 286
DIWS G F W ++ + G P P P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL--GTPSPEFMKKLQP 254
Query: 287 EFRSFIE 293
R+++E
Sbjct: 255 TVRTYVE 261
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 71
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 72 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHRD++ +N+LV ++ + KIADFG+++++
Sbjct: 130 YIHRDLRAANILV-SDTLSCKIADFGLARLI 159
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 129
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 185
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 186 TGYVATRWYRAPE 198
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 16/196 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY + A+K + D + +E +++ P
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 89
Query: 111 IVQCFGI--FEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYL 166
+VQ G+ E P I+ EYM G L L + + L ++A+QI + YL
Sbjct: 90 LVQLLGVCTLEPP---FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-P 225
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P
Sbjct: 147 EKKNFIHRDLAARNCLVGENHV-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAP 200
Query: 226 DXXXXXXXXXXXDIWS 241
+ D+W+
Sbjct: 201 ESLAYNTFSIKSDVWA 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++ +K++VL G GTVYK + KI A+K + P +++ E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSY 165
D+P + + GI + + ++ + M G LD + L + QI KG++Y
Sbjct: 82 DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L +++HRD+ N+LV VKI DFG++K++
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQ-HVKITDFGLAKLL 174
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 120
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 121 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 176
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 177 TGYVATRWYRAPE 189
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 130
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 186
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 187 TGYVATRWYRAPE 199
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 125
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 181
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 182 TGYVATRWYRAPE 194
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 128
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 184
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 185 TGYVATRWYRAPE 197
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 65 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 122
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 123 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 178
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 179 TGYVATRWYRAPE 191
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 129
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 185
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 186 TGYVATRWYRAPE 198
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 64 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 121
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 122 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 177
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 178 TGYVATRWYRAPE 190
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE-----V 196
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP-PSLPDGASP 286
DIWS G F W ++ + G P P P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL--GTPSPEFMKKLQP 254
Query: 287 EFRSFIE 293
R+++E
Sbjct: 255 TVRTYVE 261
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 128
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 184
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 185 TGYVATRWYRAPE 197
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 125
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 181
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 182 TGYVATRWYRAPE 194
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 120
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 121 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 176
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 177 TGYVATRWYRAPE 189
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 125
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 181
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 182 TGYVATRWYRAPE 194
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 25/186 (13%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 99 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 150
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK-------LAHI 155
IV+ F +K + ++++Y+ +T+ +S K +
Sbjct: 151 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLY 206
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTC 215
Q+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + SY+ +
Sbjct: 207 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSR 265
Query: 216 AYMSPE 221
Y +PE
Sbjct: 266 YYRAPE 271
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 119
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 175
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 176 TGYVATRWYRAPE 188
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 134
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 135 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 190
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 191 TGYVATRWYRAPE 203
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 113/280 (40%), Gaps = 45/280 (16%)
Query: 57 QVLGHGNGGTVYK-----VQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
+ LG G G V K ++ R + A+K++ +A P+ R + E +L++ + P +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNG------------------------TF 147
++ +G + G + +++EY G+L L ++
Sbjct: 89 IKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 148 SEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA 207
+ L A QI +G+ YL K++HRD+ N+LV ++KI+DFG+S+ +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR-KMKISDFGLSRDVYEEDSX 206
Query: 208 CNSYVGT--CAYMSPER-FDPDXXXXXXXXXXXDIWS-XXXXXXXXXXGHFPFLQPGQRP 263
G +M+ E FD D+WS G P+ PG P
Sbjct: 207 VKRSQGRIPVKWMAIESLFD------HIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPP 258
Query: 264 DWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKR 303
+ L + G PD S E + C ++E KR
Sbjct: 259 E--RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 143
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 144 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 199
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 200 TGYVATRWYRAPE 212
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 135
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 191
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 192 TGYVATRWYRAPE 204
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 135
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 191
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 192 TGYVATRWYRAPE 204
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 142
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 143 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 198
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 199 TGYVATRWYRAPE 211
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 135
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 191
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 192 TGYVATRWYRAPE 204
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 195
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 146
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 147 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 202
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 203 TGYVATRWYRAPE 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 77
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 78 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
IHRD++ +N+LV ++ + KIADFG+++++ N Y P ++ P+
Sbjct: 136 YIHRDLRAANILV-SDTLSCKIADFGLARLI-----EDNEYTAREGAKFPIKWTAPEAIN 189
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 190 YGTFTIKSDVWS 201
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 20 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLH 136
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 137 SAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 188
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 24/252 (9%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVF-REMEILRRTDSPFIVQCFGI 117
LG G G V+ + + K+ + G T+ Q F E +++ +V+ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPG----TMSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 118 F--EKPSGDIAILMEYMDSGTLDTLL--NKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
E+P I I+ EYM G+L L ++ G PKL ++QI +G++Y+ IH
Sbjct: 77 VTREEP---IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 133
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXXXXX 232
RD++ +N+LV+ + M KIADFG+++++ N Y P ++ P+
Sbjct: 134 RDLRAANVLVSESLM-CKIADFGLARVI-----EDNEYTAREGAKFPIKWTAPEAINFGC 187
Query: 233 XXXXXDIWS-XXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRSF 291
D+WS G P+ PG+ A +M A+ G + E
Sbjct: 188 FTIKSDVWSFGILLYEIVTYGKIPY--PGRTN--ADVMTALSQGYRMPRVENCPDELYDI 243
Query: 292 IECCLQKEFSKR 303
++ C +++ +R
Sbjct: 244 MKMCWKEKAEER 255
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 70
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + + L ++A+QI + YL
Sbjct: 71 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 130 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 183
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 184 LAYNKFSIKSDVWA 197
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 71
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + + L ++A+QI + YL
Sbjct: 72 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 131 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAPAGAKFPIKWTAPES 184
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 185 LAYNKFSIKSDVWA 198
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 76
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 77 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 134
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
IHRD++ +N+LV ++ + KIADFG+++++ N Y P ++ P+
Sbjct: 135 YIHRDLRAANILV-SDTLSCKIADFGLARLI-----EDNEYTAREGAKFPIKWTAPEAIN 188
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 189 YGTFTIKSDVWS 200
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 27/190 (14%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFR---EMEILRRTDSP 109
L+ L+V G G V+K Q ++ A+K+ P +Q ++ E+ L
Sbjct: 26 LQLLEVKARGRFGCVWKAQ--LLNEYVAVKIF-----PIQDKQSWQNEYEVYSLPGMKHE 78
Query: 110 FIVQCFGIFEKPSG---DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYL 166
I+Q G ++ + D+ ++ + + G+L L N S +L HIA + +GL+YL
Sbjct: 79 NILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYL 137
Query: 167 H--------GHK--IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSY--VGT 214
H GHK I HRDIK N+L+ NN+ IADFG++ A +++ VGT
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLL-KNNLTACIADFGLALKFEAGKSAGDTHGQVGT 196
Query: 215 CAYMSPERFD 224
YM+PE +
Sbjct: 197 RRYMAPEVLE 206
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 70
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + + L ++A+QI + YL
Sbjct: 71 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 130 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 183
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 184 LAYNKFSIKSDVWA 197
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 81
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 82 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 139
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
IHRD++ +N+LV ++ + KIADFG+++++ N Y P ++ P+
Sbjct: 140 YIHRDLRAANILV-SDTLSCKIADFGLARLI-----EDNEYTAREGAKFPIKWTAPEAIN 193
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 194 YGTFTIKSDVWS 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 71
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I++E+M G L L + + L ++A+QI + YL
Sbjct: 72 LVQLLGVCTREP-PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC 202
IHRD+ N LV N++ VK+ADFG+S++M
Sbjct: 131 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT 163
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE-----V 196
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP-PSLPDGASP 286
DIWS G F W ++ + G P P P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL--GTPSPEFMKKLQP 254
Query: 287 EFRSFIE 293
R+++E
Sbjct: 255 TVRTYVE 261
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 71
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 72 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
IHRD++ +N+LV ++ + KIADFG+++++ N Y P ++ P+
Sbjct: 130 YIHRDLRAANILV-SDTLSCKIADFGLARLI-----EDNEYTAREGAKFPIKWTAPEAIN 183
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 184 YGTFTIKSDVWS 195
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 74
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + + L ++A+QI + YL
Sbjct: 75 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 133
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 134 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAPES 187
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 188 LAYNKFSIKSDVWA 201
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 195
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 75
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + + L ++A+QI + YL
Sbjct: 76 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 135 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 188
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 189 LAYNKFSIKSDVWA 202
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 83
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + + L ++A+QI + YL
Sbjct: 84 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 142
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 143 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAPES 196
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 197 LAYNKFSIKSDVWA 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 66
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 67 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 124
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
IHRD++ +N+LV ++ + KIADFG+++++ N Y P ++ P+
Sbjct: 125 YIHRDLRAANILV-SDTLSCKIADFGLARLI-----EDNEYTAREGAKFPIKWTAPEAIN 178
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 179 YGTFTIKSDVWS 190
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 75
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + + L ++A+QI + YL
Sbjct: 76 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 135 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAPES 188
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 189 LAYNKFSIKSDVWA 202
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 72
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + + L ++A+QI + YL
Sbjct: 73 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 132 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAPAGAKFPIKWTAPES 185
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 186 LAYNKFSIKSDVWA 199
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 146
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 147 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 202
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 203 XGYVATRWYRAPE 215
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++L KL+VLG G GTV+K + + KI +KV+ + + V M +
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSY 165
D IV+ G+ P + ++ +Y+ G+L D + G L + QI KG+ Y
Sbjct: 73 DHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 130
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L H ++HR++ N+L+ + + QV++ADFGV+ ++
Sbjct: 131 LEEHGMVHRNLAARNVLLKSPS-QVQVADFGVADLL 165
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 72
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + + L ++A+QI + YL
Sbjct: 73 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 132 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAPES 185
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 186 LAYNKFSIKSDVWA 199
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT---VRRQVFREMEILRRTDSPFIVQCF 115
+G G G VYK + A+K + D T +++Q +E++++ + +V+
Sbjct: 39 MGEGGFGVVYK--GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 116 GIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLA-----HIASQILKGLSYLHGH 169
G F D+ ++ YM +G+L D L +GT P L+ IA G+++LH +
Sbjct: 97 G-FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHEN 152
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPE 221
IHRDIK +N+L+ + KI+DFG+++ + + VGT AYM+PE
Sbjct: 153 HHIHRDIKSANILL-DEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE 205
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 59 LGHGNGGTVYKV--------QHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
LG G G V+ Q + + ALK +A + R+ RE E+L
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALK----EASESARQDFQREAELLTMLQHQH 81
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSE---------------PKLAHI 155
IV+ FG+ + + ++ EYM G L+ L +G ++ +L +
Sbjct: 82 IVRFFGVCTE-GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTC 215
ASQ+ G+ YL G +HRD+ N LV + VKI DFG M R + + + Y
Sbjct: 141 ASQVAAGMVYLAGLHFVHRDLATRNCLV-GQGLVVKIGDFG----MSRDIYSTDYYRVGG 195
Query: 216 AYMSPERF-DPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATL-----M 269
M P R+ P+ D+WS + G++P W L +
Sbjct: 196 RTMLPIRWMPPESILYRKFTTESDVWSFGVVL-------WEIFTYGKQP-WYQLSNTEAI 247
Query: 270 CAICFGDPPSLPDGASPEFRSFIECCLQKEFSKR 303
I G P PE + + C Q+E +R
Sbjct: 248 DCITQGRELERPRACPPEVYAIMRGCWQREPQQR 281
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 72
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + + L ++A+QI + YL
Sbjct: 73 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDX 227
IHRD+ N LV N++ VK+ADFG+S++M ++Y P ++ P+
Sbjct: 132 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAPES 185
Query: 228 XXXXXXXXXXDIWS 241
D+W+
Sbjct: 186 LAYNKFSIKSDVWA 199
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYK---VQHRCTHKI-YALKVVHGDADPTVRRQVFREMEILRRT 106
++L KL+VLG G GTV+K + + KI +KV+ + + V M +
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQILKGLSY 165
D IV+ G+ P + ++ +Y+ G+L D + G L + QI KG+ Y
Sbjct: 91 DHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 148
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L H ++HR++ N+L+ + + QV++ADFGV+ ++
Sbjct: 149 LEEHGMVHRNLAARNVLLKSPS-QVQVADFGVADLL 183
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 75
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYLHG 168
+VQ G+ + I+ E+M G L L + + L ++A+QI + YL
Sbjct: 76 LVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC 202
IHRD+ N LV N++ VK+ADFG+S++M
Sbjct: 135 KNFIHRDLAARNCLVGENHL-VKVADFGLSRLMT 167
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
+G G G V++ + A+K +VR + +E +R+ D P IV+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 116 GIF-EKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
G+ E P + I+ME G L + L + + L A Q+ L+YL + +H
Sbjct: 80 GVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 136
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIM 201
RDI N+LV++N+ VK+ DFG+S+ M
Sbjct: 137 RDIAARNVLVSSNDC-VKLGDFGLSRYM 163
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
+G G G V++ + A+K +VR + +E +R+ D P IV+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 116 GIF-EKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
G+ E P + I+ME G L + L + + L A Q+ L+YL + +H
Sbjct: 75 GVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 131
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIM 201
RDI N+LV++N+ VK+ DFG+S+ M
Sbjct: 132 RDIAARNVLVSSNDC-VKLGDFGLSRYM 158
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 5/160 (3%)
Query: 67 VYKVQHRCTHKIYALKVVHG--DADPTVRRQVFREMEILRRTDSPFIVQCFGIFEKPSGD 124
VY+ + +I ALK+ +DP R + RE R P +V F + G
Sbjct: 50 VYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHD-FGEIDGQ 108
Query: 125 IAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVN 184
+ + ++ L L + G + P+ I QI L H HRD+KP N+LV+
Sbjct: 109 LYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS 168
Query: 185 NNNMQVKIADFGV-SKIMCRSLDACNSYVGTCAYMSPERF 223
++ + DFG+ S L + VGT Y +PERF
Sbjct: 169 ADDF-AYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERF 207
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 59 LGHGNGGTVYKV--------QHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
LG G G V+ Q + + ALK +A + R+ RE E+L
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALK----EASESARQDFQREAELLTMLQHQH 75
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSE---------------PKLAHI 155
IV+ FG+ + + ++ EYM G L+ L +G ++ +L +
Sbjct: 76 IVRFFGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTC 215
ASQ+ G+ YL G +HRD+ N LV + VKI DFG M R + + + Y
Sbjct: 135 ASQVAAGMVYLAGLHFVHRDLATRNCLV-GQGLVVKIGDFG----MSRDIYSTDYYRVGG 189
Query: 216 AYMSPERF-DPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATL-----M 269
M P R+ P+ D+WS + G++P W L +
Sbjct: 190 RTMLPIRWMPPESILYRKFTTESDVWSFGVVL-------WEIFTYGKQP-WYQLSNTEAI 241
Query: 270 CAICFGDPPSLPDGASPEFRSFIECCLQKEFSKR 303
I G P PE + + C Q+E +R
Sbjct: 242 DCITQGRELERPRACPPEVYAIMRGCWQREPQQR 275
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 13/187 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
+G G G V++ + A+K +VR + +E +R+ D P IV+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 116 GIF-EKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
G+ E P + I+ME G L + L + + L A Q+ L+YL + +H
Sbjct: 78 GVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXX 233
RDI N+LV++N+ VK+ DFG+S+ M + Y + + + P+
Sbjct: 135 RDIAARNVLVSSNDC-VKLGDFGLSRYM----EDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 234 XXXXDIW 240
D+W
Sbjct: 190 TSASDVW 196
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
+G G G V++ + A+K +VR + +E +R+ D P IV+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 116 GIF-EKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
G+ E P + I+ME G L + L + + L A Q+ L+YL + +H
Sbjct: 81 GVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 137
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIM 201
RDI N+LV++N+ VK+ DFG+S+ M
Sbjct: 138 RDIAARNVLVSSNDC-VKLGDFGLSRYM 164
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILR 104
I +E + +G G G V++ + A+K +VR + +E +R
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 105 RTDSPFIVQCFGIF-EKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKG 162
+ D P IV+ G+ E P + I+ME G L + L + + L A Q+
Sbjct: 67 QFDHPHIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
L+YL + +HRDI N+LV++N+ VK+ DFG+S+ M
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRYM 161
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 195
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 13/187 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
+G G G V++ + A+K +VR + +E +R+ D P IV+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 116 GIF-EKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
G+ E P + I+ME G L + L + + L A Q+ L+YL + +H
Sbjct: 78 GVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXX 233
RDI N+LV++N+ VK+ DFG+S+ M + Y + + + P+
Sbjct: 135 RDIAARNVLVSSNDC-VKLGDFGLSRYM----EDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 234 XXXXDIW 240
D+W
Sbjct: 190 TSASDVW 196
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSP 109
+E + +G G G V++ + A+K +VR + +E +R+ D P
Sbjct: 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 110 FIVQCFGIF-EKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKGLSYLH 167
IV+ G+ E P + I+ME G L + L + + L A Q+ L+YL
Sbjct: 77 HIVKLIGVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 133
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
+ +HRDI N+LV++N+ VK+ DFG+S+ M + Y + + + P+
Sbjct: 134 SKRFVHRDIAARNVLVSSNDC-VKLGDFGLSRYM----EDSTYYKASKGKLPIKWMAPES 188
Query: 228 XXXXXXXXXXDIW 240
D+W
Sbjct: 189 INFRRFTSASDVW 201
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
+G G G V++ + A+K +VR + +E +R+ D P IV+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 116 GIF-EKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
G+ E P + I+ME G L + L + + L A Q+ L+YL + +H
Sbjct: 106 GVITENP---VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 162
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIM 201
RDI N+LV++N+ VK+ DFG+S+ M
Sbjct: 163 RDIAARNVLVSSNDC-VKLGDFGLSRYM 189
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVF-REMEILRRTDSPFIVQCFGI 117
LG G G V+ + + K+ + G T+ Q F E +++ +V+ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPG----TMSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 118 FEKPSGDIAILMEYMDSGTLDTLL--NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRD 175
K I I+ E+M G+L L ++ G PKL ++QI +G++Y+ IHRD
Sbjct: 76 VTKEE-PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD 134
Query: 176 IKPSNLLVNNNNMQVKIADFGVSKIM 201
++ +N+LV+ + M KIADFG+++++
Sbjct: 135 LRAANVLVSESLM-CKIADFGLARVI 159
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DFG+++ + D +V T Y +PE
Sbjct: 143 SADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPE 192
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DFG+++ + D +V T Y +PE
Sbjct: 143 SADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPE 192
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 77
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 78 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHRD++ +N+LV ++ + KIADFG+++++
Sbjct: 136 YIHRDLRAANILV-SDTLSCKIADFGLARLI 165
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI D+G+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDYGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 29/252 (11%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE---RF- 223
IIHRD+KPSN++V ++ +KI DFG+++ GT M+PE R+
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLART-----------AGTSFMMTPEVVTRYY 191
Query: 224 -DPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP-PSLP 281
P+ DIWS G F W ++ + G P P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL--GTPCPEFM 249
Query: 282 DGASPEFRSFIE 293
P R+++E
Sbjct: 250 KKLQPTVRTYVE 261
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 107/274 (39%), Gaps = 47/274 (17%)
Query: 59 LGHGNGGTVYKV--------QHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
LG G G V+ Q + + ALK +A + R+ RE E+L
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALK----EASESARQDFQREAELLTMLQHQH 104
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSE---------------PKLAHI 155
IV+ FG+ + + ++ EYM G L+ L +G ++ +L +
Sbjct: 105 IVRFFGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTC 215
ASQ+ G+ YL G +HRD+ N LV + VKI DFG M R + + + Y
Sbjct: 164 ASQVAAGMVYLAGLHFVHRDLATRNCLV-GQGLVVKIGDFG----MSRDIYSTDYYRVGG 218
Query: 216 AYMSPERF-DPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATL-----M 269
M P R+ P+ D+WS + G++P W L +
Sbjct: 219 RTMLPIRWMPPESILYRKFTTESDVWSFGVVL-------WEIFTYGKQP-WYQLSNTEAI 270
Query: 270 CAICFGDPPSLPDGASPEFRSFIECCLQKEFSKR 303
I G P PE + + C Q+E +R
Sbjct: 271 DCITQGRELERPRACPPEVYAIMRGCWQREPQQR 304
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 80
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 81 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 138
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHRD++ +N+LV ++ + KIADFG+++++
Sbjct: 139 YIHRDLRAANILV-SDTLSCKIADFGLARLI 168
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 72
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 73 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 130
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHRD++ +N+LV ++ + KIADFG+++++
Sbjct: 131 YIHRDLRAANILV-SDTLSCKIADFGLARLI 160
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 71
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 72 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHRD++ +N+LV ++ + KIADFG+++++
Sbjct: 130 YIHRDLRAANILV-SDTLSCKIADFGLARLI 159
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 73
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 74 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 131
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHRD++ +N+LV ++ + KIADFG+++++
Sbjct: 132 YIHRDLRAANILV-SDTLSCKIADFGLARLI 161
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 19/183 (10%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVRRQVFREMEILRRT 106
++Y+D +V+G+G+ G VY+ + + ++ A+K V+ G A RE++I+R+
Sbjct: 20 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKL 70
Query: 107 DSPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQ 158
D IV+ F +K + ++++Y+ + + + ++ Q
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 159 ILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM 218
+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + SY+ + Y
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYR 189
Query: 219 SPE 221
+PE
Sbjct: 190 APE 192
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 71
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 72 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHRD++ +N+LV ++ + KIADFG+++++
Sbjct: 130 YIHRDLRAANILV-SDTLSCKIADFGLARLI 159
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 23 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 79
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 80 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 137
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
IHRD++ +N+LV ++ + KIADFG+++++
Sbjct: 138 YIHRDLRAANILV-SDTLSCKIADFGLARLI 167
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 21 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DFG+++ + D +V T Y +PE
Sbjct: 139 SADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMAGFVATRWYRAPE 188
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 94/183 (51%), Gaps = 19/183 (10%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVRRQVFREMEILRRT 106
++Y+D +V+G+G+ G VY+ + + ++ A+K V+ G A RE++I+R+
Sbjct: 20 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKL 70
Query: 107 DSPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQ 158
D IV+ F +K + ++++Y+ + + + ++ Q
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 159 ILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM 218
+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + SY+ + Y
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYR 189
Query: 219 SPE 221
+PE
Sbjct: 190 APE 192
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT---VRRQVFREMEILRRTDSPFIVQCF 115
+G G G VYK + A+K + D T +++Q +E++++ + +V+
Sbjct: 39 MGEGGFGVVYK--GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 116 GIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLA-----HIASQILKGLSYLHGH 169
G F D+ ++ YM +G+L D L +GT P L+ IA G+++LH +
Sbjct: 97 G-FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHEN 152
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPE 221
IHRDIK +N+L+ + KI+DFG+++ + VGT AYM+PE
Sbjct: 153 HHIHRDIKSANILL-DEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE 205
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 18/174 (10%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPT---VRRQVFREMEILRRTDSPFIVQCF 115
+G G G VYK + A+K + D T +++Q +E++++ + +V+
Sbjct: 33 MGEGGFGVVYK--GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 116 GIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLA-----HIASQILKGLSYLHGH 169
G F D+ ++ YM +G+L D L +GT P L+ IA G+++LH +
Sbjct: 91 G-FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLSWHMRCKIAQGAANGINFLHEN 146
Query: 170 KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPE 221
IHRDIK +N+L+ + KI+DFG+++ + VGT AYM+PE
Sbjct: 147 HHIHRDIKSANILL-DEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE 199
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 81 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 137
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 138 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 189
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 32 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 91
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 92 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 148
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 149 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 200
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 13/187 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
+G G G V++ + A+K +VR + +E +R+ D P IV+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 116 GIF-EKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
G+ E P + I+ME G L + L + + L A Q+ L+YL + +H
Sbjct: 458 GVITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXX 233
RDI N+LV++N+ VK+ DFG+S+ M + Y + + + P+
Sbjct: 515 RDIAARNVLVSSNDC-VKLGDFGLSRYM----EDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 234 XXXXDIW 240
D+W
Sbjct: 570 TSASDVW 576
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 16/196 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 277
Query: 111 IVQCFGI--FEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYL 166
+VQ G+ E P I+ E+M G L L + S L ++A+QI + YL
Sbjct: 278 LVQLLGVCTREPP---FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-P 225
IHR++ N LV N++ VK+ADFG+S++M ++Y P ++ P
Sbjct: 335 EKKNFIHRNLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAP 388
Query: 226 DXXXXXXXXXXXDIWS 241
+ D+W+
Sbjct: 389 ESLAYNKFSIKSDVWA 404
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 112/280 (40%), Gaps = 45/280 (16%)
Query: 57 QVLGHGNGGTVYK-----VQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
+ LG G G V K ++ R + A+K++ +A P+ R + E +L++ + P +
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 112 VQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNG------------------------TF 147
++ +G + G + +++EY G+L L ++
Sbjct: 89 IKLYGACSQ-DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 148 SEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDA 207
+ L A QI +G+ YL ++HRD+ N+LV ++KI+DFG+S+ +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGR-KMKISDFGLSRDVYEEDSX 206
Query: 208 CNSYVGT--CAYMSPER-FDPDXXXXXXXXXXXDIWS-XXXXXXXXXXGHFPFLQPGQRP 263
G +M+ E FD D+WS G P+ PG P
Sbjct: 207 VKRSQGRIPVKWMAIESLFD------HIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPP 258
Query: 264 DWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKR 303
+ L + G PD S E + C ++E KR
Sbjct: 259 E--RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 107/253 (42%), Gaps = 22/253 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEIL---R 104
+AY E L+V+G G+ G V K H+ ALK+V + RQ E+ IL R
Sbjct: 95 VAYR-YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLR 151
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEY-MDSGTLDTLLNKNG--TFSEPKLAHIASQILK 161
+ D + + E + I M + + S L L+ KN FS P + A IL+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 162 GLSYLHGHKIIHRDIKPSNLLVNNNNMQ-VKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
L LH ++IIH D+KP N+L+ +K+ DFG S C + + + Y +P
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRFYRAP 268
Query: 221 ERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAI-CFGDPPS 279
E D+WS G +P L PG+ + L C I G P
Sbjct: 269 E-----VILGARYGMPIDMWSLGCILAELLTG-YPLL-PGE-DEGDQLACMIELLGMPSQ 320
Query: 280 LPDGASPEFRSFI 292
AS ++F+
Sbjct: 321 KLLDASKRAKNFV 333
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 20 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 71
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQI 159
IV+ F +K + ++++Y+ + + + ++ Q+
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
+ L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + S + + Y +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRA 190
Query: 220 PE 221
PE
Sbjct: 191 PE 192
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 21 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 72
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQI 159
IV+ F +K + ++++Y+ + + + ++ Q+
Sbjct: 73 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 132
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
+ L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + S + + Y +
Sbjct: 133 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRA 191
Query: 220 PE 221
PE
Sbjct: 192 PE 193
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 20 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 71
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQI 159
IV+ F +K + ++++Y+ + + + ++ Q+
Sbjct: 72 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
+ L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + S + + Y +
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRA 190
Query: 220 PE 221
PE
Sbjct: 191 PE 192
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 50 YSDLEKLQVLGHGNGGTVYK--VQHRCTHKIYALKVVHGDADPTVRRQVFREMEIL-RRT 106
++D++ V+G GN G V K ++ A+K + A R E+E+L +
Sbjct: 14 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 73
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN----------------GTFSEP 150
P I+ G E G + + +EY G L L K+ T S
Sbjct: 74 HHPNIINLLGACEH-RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 151 KLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSK 199
+L H A+ + +G+ YL + IHRD+ N+LV N + KIADFG+S+
Sbjct: 133 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV-AKIADFGLSR 180
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 21/184 (11%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 20 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 71
Query: 108 SPFIVQCFGIFEKPSG---DIAILMEYMDSGTLDTLLNKNGTFSEPK-------LAHIAS 157
IV+ F SG D+ L +D +T+ +S K +
Sbjct: 72 HCNIVRLRYFFYS-SGEKKDVVYLNLVLDY-VPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 158 QILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAY 217
Q+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + S + + Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYY 188
Query: 218 MSPE 221
+PE
Sbjct: 189 RAPE 192
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 24/200 (12%)
Query: 59 LGHGNGGTVYK------VQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
LG G+ G VY+ V+ ++ A+K V+ A R + E +++ + +V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLL-------NKNGTFSEP---KLAHIASQILKG 162
+ G+ + + ++ME M G L + L N + P K+ +A +I G
Sbjct: 92 RLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
++YL+ +K +HRD+ N +V + VKI DFG M R + + Y + P R
Sbjct: 151 MAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 205
Query: 223 F-DPDXXXXXXXXXXXDIWS 241
+ P+ D+WS
Sbjct: 206 WMSPESLKDGVFTTYSDVWS 225
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKI-----YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LG G+ G VY+ + K A+K V+ A R + E +++ + +V+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-------NKNGTFSEP---KLAHIASQILKGL 163
G+ + + ++ME M G L + L N + P K+ +A +I G+
Sbjct: 84 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL+ +K +HRD+ N +V + VKI DFG M R + + Y + P R+
Sbjct: 143 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVRW 197
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ D+WS
Sbjct: 198 MSPESLKDGVFTTYSDVWS 216
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 53 LEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
L+ ++ LG G G V+ + K+ + G P E ++++ +V
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLMKQLQHQRLV 67
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGT-FSEPKLAHIASQILKGLSYLHGHK 170
+ + + + I I+ EYM++G+L D L +G + KL +A+QI +G++++
Sbjct: 68 RLYAVVTQEP--IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 125
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
IHR+++ +N+LV ++ + KIADFG+++++ N Y P ++ P+
Sbjct: 126 YIHRNLRAANILV-SDTLSCKIADFGLARLI-----EDNEYTAREGAKFPIKWTAPEAIN 179
Query: 230 XXXXXXXXDIWS 241
D+WS
Sbjct: 180 YGTFTIKSDVWS 191
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 107/253 (42%), Gaps = 22/253 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEIL---R 104
+AY E L+V+G G+ G V K H+ ALK+V + RQ E+ IL R
Sbjct: 95 VAYR-YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLR 151
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEY-MDSGTLDTLLNKNG--TFSEPKLAHIASQILK 161
+ D + + E + I M + + S L L+ KN FS P + A IL+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 162 GLSYLHGHKIIHRDIKPSNLLVNNNNMQ-VKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
L LH ++IIH D+KP N+L+ +K+ DFG S C + + + Y +P
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRFYRAP 268
Query: 221 ERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAI-CFGDPPS 279
E D+WS G +P L PG+ + L C I G P
Sbjct: 269 E-----VILGARYGMPIDMWSLGCILAELLTG-YPLL-PGE-DEGDQLACMIELLGMPSQ 320
Query: 280 LPDGASPEFRSFI 292
AS ++F+
Sbjct: 321 KLLDASKRAKNFV 333
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 50 YSDLEKLQVLGHGNGGTVYK--VQHRCTHKIYALKVVHGDADPTVRRQVFREMEIL-RRT 106
++D++ V+G GN G V K ++ A+K + A R E+E+L +
Sbjct: 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 83
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN----------------GTFSEP 150
P I+ G E G + + +EY G L L K+ T S
Sbjct: 84 HHPNIINLLGACEH-RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 151 KLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSK 199
+L H A+ + +G+ YL + IHRD+ N+LV N + KIADFG+S+
Sbjct: 143 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV-AKIADFGLSR 190
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 28 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 79
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQI 159
IV+ F +K + ++++Y+ + + + ++ Q+
Sbjct: 80 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 139
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
+ L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + S + + Y +
Sbjct: 140 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRA 198
Query: 220 PE 221
PE
Sbjct: 199 PE 200
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 29 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 88
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 89 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 145
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
IIHRD+KPSN++V ++ +KI DFG+++ S +V T Y +PE
Sbjct: 146 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMV-PFVVTRYYRAPE-----V 198
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP-PSLPDGASP 286
DIWS G F W ++ + G P P P
Sbjct: 199 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL--GTPCPEFMKKLQP 256
Query: 287 EFRSFIE 293
R+++E
Sbjct: 257 TVRTYVE 263
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKI-----YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LG G+ G VY+ + K A+K V+ A R + E +++ + +V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-------NKNGTFSEP---KLAHIASQILKGL 163
G+ + + ++ME M G L + L N + P K+ +A +I G+
Sbjct: 80 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL+ +K +HRD+ N +V + VKI DFG M R + + Y + P R+
Sbjct: 139 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVRW 193
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ D+WS
Sbjct: 194 MSPESLKDGVFTTYSDVWS 212
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKI-----YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LG G+ G VY+ + K A+K V+ A R + E +++ + +V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-------NKNGTFSEP---KLAHIASQILKGL 163
G+ + + ++ME M G L + L N + P K+ +A +I G+
Sbjct: 86 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL+ +K +HRD+ N +V + VKI DFG M R + + Y + P R+
Sbjct: 145 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVRW 199
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ D+WS
Sbjct: 200 MSPESLKDGVFTTYSDVWS 218
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKI-----YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LG G+ G VY+ + K A+K V+ A R + E +++ + +V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-------NKNGTFSEP---KLAHIASQILKGL 163
G+ + + ++ME M G L + L N + P K+ +A +I G+
Sbjct: 87 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL+ +K +HRD+ N +V + VKI DFG M R + + Y + P R+
Sbjct: 146 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVRW 200
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ D+WS
Sbjct: 201 MSPESLKDGVFTTYSDVWS 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 24 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 75
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQI 159
IV+ F +K + ++++Y+ + + + ++ Q+
Sbjct: 76 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 135
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
+ L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + S + + Y +
Sbjct: 136 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRA 194
Query: 220 PE 221
PE
Sbjct: 195 PE 196
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 39 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 90
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQI 159
IV+ F +K + ++++Y+ + + + ++ Q+
Sbjct: 91 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 150
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
+ L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + S + + Y +
Sbjct: 151 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRA 209
Query: 220 PE 221
PE
Sbjct: 210 PE 211
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIH 142
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DF +++ + D YV T Y +PE
Sbjct: 143 SADIIHRDLKPSNLAV-NEDCELKILDFYLAR---HTDDEMTGYVATRWYRAPE 192
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKI-----YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LG G+ G VY+ + K A+K V+ A R + E +++ + +V+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLN-------KNGTFSEP---KLAHIASQILKGL 163
G+ + + ++ME M G L + L N + P K+ +A +I G+
Sbjct: 83 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL+ +K +HRD+ N +V + VKI DFG M R + + Y + P R+
Sbjct: 142 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVRW 196
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ D+WS
Sbjct: 197 MSPESLKDGVFTTYSDVWS 215
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 24/200 (12%)
Query: 59 LGHGNGGTVYK------VQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
LG G+ G VY+ V+ ++ A+K V+ A R + E +++ + +V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 113 QCFGIFEKPSGDIAILMEYMDSGTLDTLLN-------KNGTFSEP---KLAHIASQILKG 162
+ G+ + + ++ME M G L + L N + P K+ +A +I G
Sbjct: 92 RLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPER 222
++YL+ +K +HRD+ N +V + VKI DFG M R + + Y + P R
Sbjct: 151 MAYLNANKFVHRDLAARNCMV-AEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVR 205
Query: 223 F-DPDXXXXXXXXXXXDIWS 241
+ P+ D+WS
Sbjct: 206 WMSPESLKDGVFTTYSDVWS 225
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 32 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 83
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQI 159
IV+ F +K + ++++Y+ + + + ++ Q+
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 143
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMS 219
+ L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + S + + Y +
Sbjct: 144 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRA 202
Query: 220 PE 221
PE
Sbjct: 203 PE 204
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKI-----YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LG G+ G VY+ + K A+K V+ A R + E +++ + +V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-------NKNGTFSEP---KLAHIASQILKGL 163
G+ + + ++ME M G L + L N + P K+ +A +I G+
Sbjct: 86 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL+ +K +HRD+ N +V + VKI DFG M R + + Y + P R+
Sbjct: 145 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVRW 199
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ D+WS
Sbjct: 200 MSPESLKDGVFTTYSDVWS 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 195
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 195
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 144
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 145 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 196
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 25/186 (13%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 32 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 83
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK-------LAHI 155
IV+ F +K + ++++Y+ +T+ +S K +
Sbjct: 84 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLY 139
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTC 215
Q+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + S + +
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSR 198
Query: 216 AYMSPE 221
Y +PE
Sbjct: 199 YYRAPE 204
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 26 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 85
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 86 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 142
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 143 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 194
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKI-----YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LG G+ G VY+ + K A+K V+ A R + E +++ + +V+
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-------NKNGTFSEP---KLAHIASQILKGL 163
G+ + + ++ME M G L + L N + P K+ +A +I G+
Sbjct: 115 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL+ +K +HRD+ N +V + VKI DFG M R + + Y + P R+
Sbjct: 174 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVRW 228
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ D+WS
Sbjct: 229 MSPESLKDGVFTTYSDVWS 247
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 137
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 138 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 189
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 20 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 136
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 137 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 188
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 137
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 138 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 189
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 25/186 (13%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
++Y+D +V+G+G+ G VY+ + + ++ A+K V D +R RE++I+R+ D
Sbjct: 54 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLD 105
Query: 108 SPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK-------LAHI 155
IV+ F +K + ++++Y+ +T+ +S K +
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLY 161
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTC 215
Q+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + S + +
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSR 220
Query: 216 AYMSPE 221
Y +PE
Sbjct: 221 YYRAPE 226
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 144
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 145 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 196
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 65 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 124
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 181
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 182 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 233
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 54 EKLQVLGHGNGGTV-YKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIV 112
+ L +G G G+V + H++ K+ ++ +RE+ +L+ ++
Sbjct: 45 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ M L+ ++ K ++ + + QIL+GL Y+H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLTDDHVQFLIYQILRGLKYIH 162
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSNL V N + ++KI DFG+++ + D V T Y +PE
Sbjct: 163 SADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEMXGXVATRWYRAPE 212
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI FG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILGFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 65 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 124
Query: 113 QCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F + D+ ++ME MD+ + +++++ Q+L G+ +LH
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 181
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
IIHRD+KPSN++V ++ +KI DFG+++ S YV T Y +PE
Sbjct: 182 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPE 233
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 16/196 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 259 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 316
Query: 111 IVQCFGI--FEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYL 166
+VQ G+ E P I+ E+M G L L + + L ++A+QI + YL
Sbjct: 317 LVQLLGVCTREPP---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-P 225
IHR++ N LV N++ VK+ADFG+S++M ++Y P ++ P
Sbjct: 374 EKKNFIHRNLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAP 427
Query: 226 DXXXXXXXXXXXDIWS 241
+ D+W+
Sbjct: 428 ESLAYNKFSIKSDVWA 443
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVR-RQVFREMEILRRTDSPFIVQCF 115
++G G+ G VY + +K A+K V+ + + +++ RE+ IL R S +I++
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLH 93
Query: 116 GIFEKPS----GDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
+ ++ I++E DS L L +E + I +L G ++H I
Sbjct: 94 DLIIPEDLLKFDELYIVLEIADSD-LKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGI 152
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLD 206
IHRD+KP+N L+ N + VKI DFG+++ + D
Sbjct: 153 IHRDLKPANCLL-NQDCSVKICDFGLARTINSDKD 186
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 91 TVRRQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNG 145
T ++ +RE+ +L+ + I+ +F + D+ ++ME MD+ + +
Sbjct: 63 THAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HM 119
Query: 146 TFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSL 205
+++++ Q+L G+ +LH IIHRD+KPSN++V ++ +KI DFG+++ +
Sbjct: 120 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTASTNF 178
Query: 206 DACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDW 265
YV T Y +PE DIWS G F W
Sbjct: 179 -MMTPYVVTRYYRAPE-----VILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQW 232
Query: 266 ATLMCAICFGDPPS-LPDGASPEFRSFIE 293
++ + G P + P R+++E
Sbjct: 233 NKVIEQL--GTPSAEFMAALQPTVRNYVE 259
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI DFG+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDFGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
V T Y +PE
Sbjct: 180 TGXVATRWYRAPE 192
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI D G+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDAGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
DL L+ LG G G V + R + + A+K++ + + E +++ +
Sbjct: 9 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGS--MSEDEFIEEAKVMMNLSHEKL 65
Query: 112 VQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
VQ +G+ K I I+ EYM +G L+ L F +L + + + + YL +
Sbjct: 66 VQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD+ N LVN+ + VK++DFG+S+ + LD + Y + P R+ P+
Sbjct: 125 FLHRDLAARNCLVNDQGV-VKVSDFGLSRYV---LD--DEYTSSVGSKFPVRWSPPEVLM 178
Query: 230 XXXXXXXXDIWS 241
DIW+
Sbjct: 179 YSKFSSKSDIWA 190
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 16/196 (8%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
+D+ LG G G VY+ + A+K + D + +E +++ P
Sbjct: 217 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--EEFLKEAAVMKEIKHPN 274
Query: 111 IVQCFGI--FEKPSGDIAILMEYMDSGTLDTLLNK--NGTFSEPKLAHIASQILKGLSYL 166
+VQ G+ E P I+ E+M G L L + + L ++A+QI + YL
Sbjct: 275 LVQLLGVCTREPP---FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-P 225
IHR++ N LV N++ VK+ADFG+S++M ++Y P ++ P
Sbjct: 332 EKKNFIHRNLAARNCLVGENHL-VKVADFGLSRLMT-----GDTYTAHAGAKFPIKWTAP 385
Query: 226 DXXXXXXXXXXXDIWS 241
+ D+W+
Sbjct: 386 ESLAYNKFSIKSDVWA 401
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
DL L+ LG G G V + R + + A+K++ + + E +++ +
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGS--MSEDEFIEEAKVMMNLSHEKL 81
Query: 112 VQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
VQ +G+ K I I+ EYM +G L+ L F +L + + + + YL +
Sbjct: 82 VQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD+ N LVN+ + VK++DFG+S+ + LD + Y + P R+ P+
Sbjct: 141 FLHRDLAARNCLVNDQGV-VKVSDFGLSRYV---LD--DEYTSSVGSKFPVRWSPPEVLM 194
Query: 230 XXXXXXXXDIWS 241
DIW+
Sbjct: 195 YSKFSSKSDIWA 206
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
DL L+ LG G G V + R + + A+K++ + + E +++ +
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGS--MSEDEFIEEAKVMMNLSHEKL 61
Query: 112 VQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
VQ +G+ K I I+ EYM +G L+ L F +L + + + + YL +
Sbjct: 62 VQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD+ N LVN+ + VK++DFG+S+ + LD + Y + P R+ P+
Sbjct: 121 FLHRDLAARNCLVNDQGV-VKVSDFGLSRYV---LD--DEYTSSVGSKFPVRWSPPEVLM 174
Query: 230 XXXXXXXXDIWS 241
DIW+
Sbjct: 175 YSKFSSKSDIWA 186
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
DL L+ LG G G V + R + + A+K++ + + E +++ +
Sbjct: 16 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGS--MSEDEFIEEAKVMMNLSHEKL 72
Query: 112 VQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
VQ +G+ K I I+ EYM +G L+ L F +L + + + + YL +
Sbjct: 73 VQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD+ N LVN+ + VK++DFG+S+ + LD + Y + P R+ P+
Sbjct: 132 FLHRDLAARNCLVNDQGV-VKVSDFGLSRYV---LD--DEYTSSVGSKFPVRWSPPEVLM 185
Query: 230 XXXXXXXXDIWS 241
DIW+
Sbjct: 186 YSKFSSKSDIWA 197
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
DL L+ LG G G V + R + + A+K++ + + E +++ +
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGS--MSEDEFIEEAKVMMNLSHEKL 66
Query: 112 VQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
VQ +G+ K I I+ EYM +G L+ L F +L + + + + YL +
Sbjct: 67 VQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD+ N LVN+ + VK++DFG+S+ + LD + Y + P R+ P+
Sbjct: 126 FLHRDLAARNCLVNDQGV-VKVSDFGLSRYV---LD--DEYTSSVGSKFPVRWSPPEVLM 179
Query: 230 XXXXXXXXDIWS 241
DIW+
Sbjct: 180 YSKFSSKSDIWA 191
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI D G+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDRGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 94 RQVFREMEILRRTDSPFIVQCFGIFE-----KPSGDIAILMEYMDSGTLDTLLNKNGTFS 148
++ +RE+ +L+ ++ +F + D+ ++ M L+ ++ K +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV-KCQKLT 123
Query: 149 EPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC 208
+ + + QIL+GL Y+H IIHRD+KPSNL V N + ++KI D G+++ + D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-NEDCELKILDGGLAR---HTDDEM 179
Query: 209 NSYVGTCAYMSPE 221
YV T Y +PE
Sbjct: 180 TGYVATRWYRAPE 192
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKI-----YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LG G+ G VY+ + K A+K V+ A R + E +++ + +V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-------NKNGTFSEP---KLAHIASQILKGL 163
G+ + + ++ME M G L + L N + P K+ +A +I G+
Sbjct: 80 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL+ +K +HRD+ N V + VKI DFG M R + + Y + P R+
Sbjct: 139 AYLNANKFVHRDLAARNCXV-AEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPVRW 193
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ D+WS
Sbjct: 194 MSPESLKDGVFTTYSDVWS 212
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 82/181 (45%), Gaps = 13/181 (7%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEIL---R 104
+AY E L+V+G G G V K H+ ALK+V + RQ E+ IL R
Sbjct: 95 VAYR-YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLR 151
Query: 105 RTDSPFIVQCFGIFEKPSGDIAILMEY-MDSGTLDTLLNKNG--TFSEPKLAHIASQILK 161
+ D + + E + I M + + S L L+ KN FS P + A IL+
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQ 211
Query: 162 GLSYLHGHKIIHRDIKPSNLLVNNNNMQ-VKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
L LH ++IIH D+KP N+L+ +K+ DFG S C + + Y +P
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYXXIQSRFYRAP 268
Query: 221 E 221
E
Sbjct: 269 E 269
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 23/269 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVR-----RQVFREME 101
+A +++E + +G G G V+K + + A+K ++ GD++ ++ RE+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 102 ILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQIL 160
I+ + P IV+ +G+ P ++ME++ G L LL+K + I
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPP---RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 161 KGLSYLHGHK--IIHRDIKPSNLLV----NNNNMQVKIADFGVSKIMCRSLDACNSYVGT 214
G+ Y+ I+HRD++ N+ + N + K+ADFG+S+ +S+ + + +G
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---QSVHSVSGLLGN 189
Query: 215 CAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICF 274
+M+PE + D +S G PF + M
Sbjct: 190 FQWMAPETIGAE---EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR-EE 245
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKR 303
G P++P+ P R+ IE C + KR
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 94/183 (51%), Gaps = 19/183 (10%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVRRQVFREMEILRRT 106
++Y+D +V+G+G+ G VY+ + + ++ A+K V+ G A RE++I+R+
Sbjct: 20 VSYTDT---KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKL 70
Query: 107 DSPFIVQCFGIF-----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA---SQ 158
D IV+ F +K + ++++Y+ + + + + ++ Q
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 159 ILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYM 218
+ + L+Y+H I HRDIKP NLL++ + +K+ DFG +K + R + S + + Y
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYR 189
Query: 219 SPE 221
+PE
Sbjct: 190 APE 192
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
+G G G V++ + A+K +VR + +E +R+ D P IV+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 116 GIF-EKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
G+ E P + I+ME G L + L + + L A Q+ L+YL + +H
Sbjct: 78 GVITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIM 201
RDI N+LV+ + VK+ DFG+S+ M
Sbjct: 135 RDIAARNVLVSATDC-VKLGDFGLSRYM 161
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE---RF- 223
IIHRD+KPSN++V ++ +KI DFG+++ GT M PE R+
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLART-----------AGTSFMMEPEVVTRYY 191
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ DIWS
Sbjct: 192 RAPEVILGMGYKENVDIWS 210
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHK---IYALKVVHGD--ADPTVRRQVFREMEI 102
I DL L+ LG G+ G V + + A+K + D + P RE+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
+ D +++ +G+ P + + + S LD L G F L+ A Q+ +G
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS-LLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLD 206
+ YL + IHRD+ NLL+ ++ VKI DFG+ + + ++ D
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDD 176
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 29/272 (10%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVR-----RQVFREME 101
+A +++E + +G G G V+K + + A+K ++ GD++ ++ RE+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 102 ILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQIL 160
I+ + P IV+ +G+ P ++ME++ G L LL+K + I
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPP---RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 161 KGLSYLHGHK--IIHRDIKPSNLLV----NNNNMQVKIADFGVSKIMCRSLDACNSYVGT 214
G+ Y+ I+HRD++ N+ + N + K+ADFG S+ +S+ + + +G
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---QSVHSVSGLLGN 189
Query: 215 CAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICF 274
+M+PE + D +S G PF + +
Sbjct: 190 FQWMAPETIGAE---EESYTEKADTYSFAMILYTILTGEGPF----DEYSYGKIKFINMI 242
Query: 275 ---GDPPSLPDGASPEFRSFIECCLQKEFSKR 303
G P++P+ P R+ IE C + KR
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 50 YSDLEKLQVLGHGNGGTVYK--VQHRCTHKIYALKVVHGDADPTVRRQVFREMEIL-RRT 106
++D++ V+G GN G V K ++ A+K + A R E+E+L +
Sbjct: 21 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 80
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN----------------GTFSEP 150
P I+ G E G + + +EY G L L K+ T S
Sbjct: 81 HHPNIINLLGACEH-RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 151 KLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSK 199
+L H A+ + +G+ YL + IHR++ N+LV N + KIADFG+S+
Sbjct: 140 QLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYV-AKIADFGLSR 187
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 99 EMEILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDT------LLNKNGTFSEP-- 150
E++I+ + + + C GI ++ I+ EYM++ ++ +L+KN T P
Sbjct: 93 ELQIITDIKNEYCLTCEGIITN-YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 151 KLAHIASQILKGLSYLHGHK-IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACN 209
+ I +L SY+H K I HRD+KPSN+L++ N +VK++DFG S+ M
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG-RVKLSDFGESEYMVDK--KIK 208
Query: 210 SYVGTCAYMSPERFDPDXXXXXXXXXXXDIWS 241
GT +M PE F + DIWS
Sbjct: 209 GSRGTYEFMPPEFFSNE---SSYNGAKVDIWS 237
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHK---IYALKVVHGD--ADPTVRRQVFREMEI 102
I DL L+ LG G+ G V + + A+K + D + P RE+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
+ D +++ +G+ P + + + S LD L G F L+ A Q+ +G
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS-LLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLD 206
+ YL + IHRD+ NLL+ ++ VKI DFG+ + + ++ D
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDD 176
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKI-----YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LG G+ G VY+ + K A+K V+ A R + E +++ + +V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-------NKNGTFSEP---KLAHIASQILKGL 163
G+ + + ++ME M G L + L N + P K+ +A +I G+
Sbjct: 87 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL+ +K +HRD+ N +V + VKI DFG M R + + + P R+
Sbjct: 146 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPVRW 200
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ D+WS
Sbjct: 201 MSPESLKDGVFTTYSDVWS 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 114/276 (41%), Gaps = 24/276 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVF-REMEILRRT 106
I + LE +++G G G VY H H A++++ + D + + F RE+ R+T
Sbjct: 30 IPFEQLEIGELIGKGRFGQVY---HGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQT 86
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSY 165
+V G P +AI+ TL +++ + K IA +I+KG+ Y
Sbjct: 87 RHENVVLFMGACMSPP-HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGY 145
Query: 166 LHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKI-----MCRSLDACNSYVGTCAYMSP 220
LH I+H+D+K N+ +N +V I DFG+ I R D G +++P
Sbjct: 146 LHAKGILHKDLKSKNVFYDNG--KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 221 E---RFDPDXXXXXX-XXXXXDIWSXXXXXXXXXXGHFPF-LQPGQRPDWATLMCAICFG 275
E + PD D+++ +PF QP + W + G
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW-----QMGTG 258
Query: 276 DPPSLPD-GASPEFRSFIECCLQKEFSKRWTASQLL 310
P+L G E + C E +R T ++L+
Sbjct: 259 MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLM 294
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
+A + +LG G G VYK + A+K + + Q E+E++
Sbjct: 35 VASDNFSNKNILGRGGFGKVYK-GRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAV 93
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT----FSEPKLAHIASQILKGL 163
+++ G P+ + ++ YM +G++ + L + PK IA +GL
Sbjct: 94 HRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGL 152
Query: 164 SYLHGH---KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM-CRSLDACNSYVGTCAYMS 219
+YLH H KIIHRD+K +N+L+ + + + DFG++K+M + + GT +++
Sbjct: 153 AYLHDHCDPKIIHRDVKAANILL-DEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIA 211
Query: 220 PE 221
PE
Sbjct: 212 PE 213
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 188
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFF------RQRVSSECQH 237
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 238 LIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHK---IYALKVVHGD--ADPTVRRQVFREMEI 102
I DL L+ LG G+ G V + + A+K + D + P RE+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
+ D +++ +G+ P + + + S LD L G F L+ A Q+ +G
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS-LLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLD 206
+ YL + IHRD+ NLL+ ++ VKI DFG+ + + ++ D
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDD 170
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKI-----YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LG G+ G VY+ + K A+K V+ A R + E +++ + +V+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-------NKNGTFSEP---KLAHIASQILKGL 163
G+ + + ++ME M G L + L N + P K+ +A +I G+
Sbjct: 78 LLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 164 SYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF 223
+YL+ +K +HRD+ N +V + VKI DFG M R + + + P R+
Sbjct: 137 AYLNANKFVHRDLAARNCMV-AEDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPVRW 191
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ D+WS
Sbjct: 192 MSPESLKDGVFTTYSDVWS 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
DL L+ LG G G V + R + + A+K++ + + E +++ +
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGS--MSEDEFIEEAKVMMNLSHEKL 66
Query: 112 VQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
VQ +G+ K I I+ EYM +G L+ L F +L + + + + YL +
Sbjct: 67 VQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD+ N LVN+ + VK++DFG+S+ + LD + Y + P R+ P+
Sbjct: 126 FLHRDLAARNCLVNDQGV-VKVSDFGLSRYV---LD--DEYTSSRGSKFPVRWSPPEVLM 179
Query: 230 XXXXXXXXDIWS 241
DIW+
Sbjct: 180 YSKFSSKSDIWA 191
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHK---IYALKVVHGD--ADPTVRRQVFREMEI 102
I DL L+ LG G+ G V + + A+K + D + P RE+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
+ D +++ +G+ P + + + S LD L G F L+ A Q+ +G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS-LLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLD 206
+ YL + IHRD+ NLL+ ++ VKI DFG+ + + ++ D
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDD 166
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 179
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHK---IYALKVVHGD--ADPTVRRQVFREMEI 102
I DL L+ LG G+ G V + + A+K + D + P RE+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
+ D +++ +G+ P + + + S LD L G F L+ A Q+ +G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS-LLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLD 206
+ YL + IHRD+ NLL+ ++ VKI DFG+ + + ++ D
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDD 166
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHK---IYALKVVHGD--ADPTVRRQVFREMEI 102
I DL L+ LG G+ G V + + A+K + D + P RE+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
+ D +++ +G+ P + + + S LD L G F L+ A Q+ +G
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS-LLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLD 206
+ YL + IHRD+ NLL+ ++ VKI DFG+ + + ++ D
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDD 170
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHK---IYALKVVHGD--ADPTVRRQVFREMEI 102
I DL L+ LG G+ G V + + A+K + D + P RE+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKG 162
+ D +++ +G+ P + + + S LD L G F L+ A Q+ +G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGS-LLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 163 LSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLD 206
+ YL + IHRD+ NLL+ ++ VKI DFG+ + + ++ D
Sbjct: 124 MGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDD 166
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 7/172 (4%)
Query: 55 KLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIVQ 113
++ LG G G VYK T++ A+K + + + V RE+ +L+ I++
Sbjct: 38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIE 97
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
+ + + ++ EY ++ L ++KN S + Q++ G+++ H + +H
Sbjct: 98 LKSVIHH-NHRLHLIFEYAEND-LKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLH 155
Query: 174 RDIKPSNLLVNNNNMQ----VKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
RD+KP NLL++ ++ +KI DFG+++ + + T Y PE
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPE 207
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFI 111
DL L+ LG G G V + R + + A+K++ + + E +++ +
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGS--MSEDEFIEEAKVMMNLSHEKL 81
Query: 112 VQCFGIFEKPSGDIAILMEYMDSG-TLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
VQ +G+ K I I+ EYM +G L+ L F +L + + + + YL +
Sbjct: 82 VQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXX 229
+HRD+ N LVN+ + VK++DFG+S+ + D S VG+ P R+ P+
Sbjct: 141 FLHRDLAARNCLVNDQGV-VKVSDFGLSRYVLD--DEETSSVGS---KFPVRWSPPEVLM 194
Query: 230 XXXXXXXXDIWS 241
DIW+
Sbjct: 195 YSKFSSKSDIWA 206
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 13/187 (6%)
Query: 59 LGHGNGGTVYKVQHRCTHK---IYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
+G G G V++ + A+K +VR + +E +R+ D P IV+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 116 GIF-EKPSGDIAILMEYMDSGTLDTLLN-KNGTFSEPKLAHIASQILKGLSYLHGHKIIH 173
G+ E P + I+ME G L + L + + L A Q+ L+YL + +H
Sbjct: 458 GVITENP---VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXXXXX 233
RDI N+LV+ + VK+ DFG+S+ M + Y + + + P+
Sbjct: 515 RDIAARNVLVSATDC-VKLGDFGLSRYM----EDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 234 XXXXDIW 240
D+W
Sbjct: 570 TSASDVW 576
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 203
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSSECQH 252
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 253 LIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 184
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF + G S E +
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------IIGGQVFFRQRVSSECQH 233
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 234 LIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 216
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF + G S E +
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------IIGGQVFFRQRVSSECQH 265
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 266 LIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 128/315 (40%), Gaps = 60/315 (19%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
IAY++ +V+G+G+ G V++ + + ++ KV+ +R RE++I+R
Sbjct: 40 IAYTNC---KVIGNGSFGVVFQAKLVESDEVAIKKVLQD------KRFKNRELQIMRIVK 90
Query: 108 SPFIVQCFGIFEKPSGD------IAILMEYMDSGTLDTLLNKNGTFSEPK-------LAH 154
P +V F +GD + +++EY+ +T+ + +++ K +
Sbjct: 91 HPNVVDLKAFFYS-NGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKL 145
Query: 155 IASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGT 214
Q+L+ L+Y+H I HRDIKP NLL++ + +K+ DFG +KI+ + S + +
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG-EPNVSXICS 204
Query: 215 CAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICF 274
Y +PE DIWS G F PG+ +
Sbjct: 205 RYYRAPELI----FGATNYTTNIDIWSTGCVMAELMQGQPLF--PGESGIDQLVEIIKVL 258
Query: 275 GDP---------PSLPDGASPEFR-----------------SFIECCLQKEFSKRWTASQ 308
G P P+ + P+ R I L+ S R TA +
Sbjct: 259 GTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIE 318
Query: 309 LLTHPFLCKNRRSDC 323
L HPF + R +
Sbjct: 319 ALCHPFFDELRTGEA 333
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 204
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSSECQH 253
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 254 LIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 189
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSSECQH 238
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 239 LIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 188
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 189 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSSECQH 237
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 238 LIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 115/277 (41%), Gaps = 39/277 (14%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRR---QVF----REMEILRRTDS-P 109
VLGHG GT+ + + + D V+R + F RE+++LR +D P
Sbjct: 31 VLGHGAEGTI------------VYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHP 78
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGH 169
+++ F EK I +E + + + K+ + + Q GL++LH
Sbjct: 79 NVIRYFCT-EKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL 137
Query: 170 KIIHRDIKPSNLLVNNNNMQVK----IADFGVSKIMC---RSLDACNSYVGTCAYMSPER 222
I+HRD+KP N+L++ N K I+DFG+ K + S + GT +++PE
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM 197
Query: 223 FDPDXXXXXXXXXXXDIWSXX-XXXXXXXXGHFPFLQPGQRPDWATLMCAICFGD---PP 278
D DI+S G PF + QR A ++ C D P
Sbjct: 198 LSED--CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--QANILLGACSLDCLHPE 253
Query: 279 SLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
D + R IE + + KR +A +L HPF
Sbjct: 254 KHEDVIA---RELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 54 EKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGD-ADPTVRRQVFREMEILRRTDSPFIV 112
+ L+ +G G G V + A+K + + T ++ +RE+ +++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 113 QCFGIFEKPSG-----DIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
+F D+ I+ME MD+ + +++++ Q+L G+ +LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH 143
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE---RF- 223
IIHRD+KPSN++V ++ +KI DFG+++ GT M PE R+
Sbjct: 144 SAGIIHRDLKPSNIVV-KSDCTLKILDFGLART-----------AGTSFMMEPEVVTRYY 191
Query: 224 -DPDXXXXXXXXXXXDIWS 241
P+ D+WS
Sbjct: 192 RAPEVILGMGYKENVDLWS 210
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 217
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF + G S E +
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------IIGGQVFFRQRVSSECQH 266
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 267 LIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 204
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 205 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSXECQH 253
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 254 LIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 203
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 204 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSXECQH 252
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 253 LIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 216
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF + G S E +
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------IIGGQVFFRQRVSSECQH 265
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 266 LIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHK-----IYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
L+ LG G+ G VY+ R K A+K V+ A R + E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLN------KNGTFSEP----KLAHIASQIL 160
+V+ G+ K + ++ME M G L + L +N P ++ +A++I
Sbjct: 82 VVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
G++YL+ K +HRD+ N +V ++ VKI DFG M R + + Y + P
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLP 195
Query: 221 ERF-DPDXXXXXXXXXXXDIWS 241
R+ P+ D+WS
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWS 217
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 216
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSSECQH 265
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 266 LIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 217
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF + G S E +
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------IIGGQVFFRQRVSSECQH 266
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 267 LIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 216
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF + G S E +
Sbjct: 217 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------IIGGQVFFRQRVSXECQH 265
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 266 LIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 169
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 223
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 224 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSSECQH 272
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 273 LIRWCLALRPSDRPTFEEIQNHPWM 297
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 231
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSXECQH 280
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 281 LIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 189
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSSECQH 238
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 239 LIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 217
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF + G S E +
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------IIGGQVFFRQRVSXECQH 266
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 267 LIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 189
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 190 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSSECQH 238
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 239 LIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 217
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF + G S E +
Sbjct: 218 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------IIGGQVFFRQRVSXECQH 266
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 267 LIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 231
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSSECQH 280
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 281 LIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 133
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 187
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 188 RYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFF------RQRVSSECQH 236
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 237 LIRWCLALRPSDRPTFEEIQNHPWM 261
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 184
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 185 RYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFF------RQRVSSECQH 233
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 234 LIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPE 221
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 199
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHK-----IYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
L+ LG G+ G VY+ R K A+K V+ A R + E +++
Sbjct: 21 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 80
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLN------KNGTFSEP----KLAHIASQIL 160
+V+ G+ K + ++ME M G L + L +N P ++ +A++I
Sbjct: 81 VVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
G++YL+ K +HRD+ N +V ++ VKI DFG M R + + Y + P
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLP 194
Query: 221 ERF-DPDXXXXXXXXXXXDIWS 241
R+ P+ D+WS
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWS 216
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 182
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 236
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 237 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSXECQH 285
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 286 LIRWCLALRPSDRPTFEEIQNHPWM 310
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 24/265 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGD-----ADPTVRRQVFREMEILRRTDSPF-- 110
+LG G G+VY + A+K V D + +V E+ +L++ S F
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHK 170
+++ FE+P + IL L + + G E Q+L+ + + H
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 157
Query: 171 IIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDXXXX 230
++HRDIK N+L++ N ++K+ DFG ++ ++ + GT Y PE
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI----RYH 211
Query: 231 XXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPEFRS 290
+WS G PF D + + F S E +
Sbjct: 212 RYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR------QRVSXECQH 260
Query: 291 FIECCLQKEFSKRWTASQLLTHPFL 315
I CL S R T ++ HP++
Sbjct: 261 LIRWCLALRPSDRPTFEEIQNHPWM 285
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 86/216 (39%), Gaps = 28/216 (12%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYK------VQHRCTHKIYALKVVHGDADPTVRRQVFREME 101
I+ S + ++ LG G VYK T + A+K + A+ +R + E
Sbjct: 23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAV-AIKTLKDKAEGPLREEFRHEAM 81
Query: 102 ILRRTDSPFIVQCFGIFEKPS-----------GDIAILM----EYMDSGTLDTLLNKNGT 146
+ R P +V G+ K GD+ + + D G+ D
Sbjct: 82 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 141
Query: 147 FSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLD 206
P H+ +QI G+ YL H ++H+D+ N+LV + + VKI+D G + R +
Sbjct: 142 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV-YDKLNVKISDLG----LFREVY 196
Query: 207 ACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
A + Y + P R+ P+ DIWS
Sbjct: 197 AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWS 232
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 23/269 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVR-----RQVFREME 101
+A +++E + +G G G V+K + + A+K ++ GD++ ++ RE+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 102 ILRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAHIASQIL 160
I+ + P IV+ +G+ P ++ME++ G L LL+K + I
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPP---RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 161 KGLSYLHGHK--IIHRDIKPSNLLV----NNNNMQVKIADFGVSKIMCRSLDACNSYVGT 214
G+ Y+ I+HRD++ N+ + N + K+ADF +S+ +S+ + + +G
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---QSVHSVSGLLGN 189
Query: 215 CAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICF 274
+M+PE + D +S G PF + M
Sbjct: 190 FQWMAPETIGAE---EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR-EE 245
Query: 275 GDPPSLPDGASPEFRSFIECCLQKEFSKR 303
G P++P+ P R+ IE C + KR
Sbjct: 246 GLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 22/202 (10%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHK-----IYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
L+ LG G+ G VY+ R K A+K V+ A R + E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLN------KNGTFSEP----KLAHIASQIL 160
+V+ G+ K + ++ME M G L + L +N P ++ +A++I
Sbjct: 82 VVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
G++YL+ K +HRD+ N +V ++ VKI DFG M R + Y + P
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFG----MTRDIYETAYYRKGGKGLLP 195
Query: 221 ERF-DPDXXXXXXXXXXXDIWS 241
R+ P+ D+WS
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWS 217
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 86/216 (39%), Gaps = 28/216 (12%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYK------VQHRCTHKIYALKVVHGDADPTVRRQVFREME 101
I+ S + ++ LG G VYK T + A+K + A+ +R + E
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAV-AIKTLKDKAEGPLREEFRHEAM 64
Query: 102 ILRRTDSPFIVQCFGIFEKPS-----------GDIAILM----EYMDSGTLDTLLNKNGT 146
+ R P +V G+ K GD+ + + D G+ D
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 147 FSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLD 206
P H+ +QI G+ YL H ++H+D+ N+LV + + VKI+D G + R +
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV-YDKLNVKISDLG----LFREVY 179
Query: 207 ACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
A + Y + P R+ P+ DIWS
Sbjct: 180 AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWS 215
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTD 107
+A + +LG G G VYK + A+K + + Q E+E++
Sbjct: 27 VASDNFXNKNILGRGGFGKVYK-GRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAV 85
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT----FSEPKLAHIASQILKGL 163
+++ G P+ + ++ YM +G++ + L + PK IA +GL
Sbjct: 86 HRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGL 144
Query: 164 SYLHGH---KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIM-CRSLDACNSYVGTCAYMS 219
+YLH H KIIHRD+K +N+L+ + + + DFG++K+M + + G +++
Sbjct: 145 AYLHDHCDPKIIHRDVKAANILL-DEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIA 203
Query: 220 PE 221
PE
Sbjct: 204 PE 205
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 20/180 (11%)
Query: 59 LGHGNGGTVYKVQHRCTHKI--YALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
+G G G VYK + + YALK + G + RE+ +LR P ++
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQK 85
Query: 117 IF-EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPK--------LAHIASQILKGLSYLH 167
+F + +L +Y + + + + K + + QIL G+ YLH
Sbjct: 86 VFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145
Query: 168 GHKIIHRDIKPSNLLVNNNNMQ---VKIADFGVSKIM---CRSLDACNSYVGTCAYMSPE 221
+ ++HRD+KP+N+LV + VKIAD G +++ + L + V T Y +PE
Sbjct: 146 ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 57 QVLGHGNGGTVY------KVQHRCTHKIYALKVVHGDADPTVRRQV---FREMEILRRTD 107
+V+G G+ G VY + Q+R I +L + T +QV RE ++R +
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI------TEMQQVEAFLREGLLMRGLN 80
Query: 108 SPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLL---NKNGTFSEPKLAHIASQILKGLS 164
P ++ GI P G +L+ YM G L + +N T + L Q+ +G+
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKD--LISFGLQVARGME 138
Query: 165 YLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSK 199
YL K +HRD+ N ++ + + VK+ADFG+++
Sbjct: 139 YLAEQKFVHRDLAARNCML-DESFTVKVADFGLAR 172
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQHRCTHK-----IYALKVVHGDADPTVRRQVFREMEI 102
++ + L+ LG G+ G VY+ R K A+K V+ A R + E +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLN------KNGTFSEP----KL 152
++ +V+ G+ K + ++ME M G L + L +N P ++
Sbjct: 74 MKGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 153 AHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYV 212
+A++I G++YL+ K +HRD+ N +V ++ VKI DFG M R + +
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFG----MTRDIXETDXXR 187
Query: 213 GTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
+ P R+ P+ D+WS
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWS 217
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 22/202 (10%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHK-----IYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
L+ LG G+ G VY+ R K A+K V+ A R + E +++
Sbjct: 19 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 78
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLN------KNGTFSEP----KLAHIASQIL 160
+V+ G+ K + ++ME M G L + L +N P ++ +A++I
Sbjct: 79 VVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
G++YL+ K +HRD+ N +V ++ VKI DFG M R + + + P
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLP 192
Query: 221 ERF-DPDXXXXXXXXXXXDIWS 241
R+ P+ D+WS
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWS 214
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHK-----IYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
L+ LG G+ G VY+ R K A+K V+ A R + E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLN------KNGTFSEP----KLAHIASQIL 160
+V+ G+ K + ++ME M G L + L +N P ++ +A++I
Sbjct: 82 VVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
G++YL+ K +HR++ N +V ++ VKI DFG M R + + Y + P
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCMV-AHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLP 195
Query: 221 ERF-DPDXXXXXXXXXXXDIWS 241
R+ P+ D+WS
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWS 217
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 22/202 (10%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHK-----IYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
L+ LG G+ G VY+ R K A+K V+ A R + E +++
Sbjct: 22 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLN------KNGTFSEP----KLAHIASQIL 160
+V+ G+ K + ++ME M G L + L +N P ++ +A++I
Sbjct: 82 VVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
G++YL+ K +HRD+ N +V ++ VKI DFG M R + + + P
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMV-AHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLP 195
Query: 221 ERF-DPDXXXXXXXXXXXDIWS 241
R+ P+ D+WS
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWS 217
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHK-----IYALKVVHGDADPTVRRQVFREMEILRRTDSPF 110
L+ LG G+ G VY+ R K A+K V+ A R + E +++
Sbjct: 23 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 82
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLN------KNGTFSEP----KLAHIASQIL 160
+V+ G+ K + ++ME M G L + L +N P ++ +A++I
Sbjct: 83 VVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 161 KGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSP 220
G++YL+ K +HR++ N +V ++ VKI DFG M R + + Y + P
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCMV-AHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLP 196
Query: 221 ERF-DPDXXXXXXXXXXXDIWS 241
R+ P+ D+WS
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWS 218
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 60 GHGNGGTVYKVQHRCTHKIYALKVVHGDADPT---VRRQVFREMEILRRTDSPFIVQCFG 116
G G G VYK + A+K + D T +++Q +E+++ + +V+ G
Sbjct: 31 GEGGFGVVYK--GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 117 IFEKPSGDIAILMEYMDSGTL-DTLLNKNGT--FSEPKLAHIASQILKGLSYLHGHKIIH 173
F D+ ++ Y +G+L D L +GT S IA G+++LH + IH
Sbjct: 89 -FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIH 147
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDAC--NSYVGTCAYMSPE 221
RDIK +N+L+ + KI+DFG+++ + + VGT AY +PE
Sbjct: 148 RDIKSANILL-DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE 196
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALK-VVHGDADPTVRRQVFREMEILRRTDSPFIVQCF 115
++G G+ G V + + ++ A+K ++ D +++ RE+ IL R + +V+
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 116 GIF----EKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHGHKI 171
I + ++ +++E DS L +E + + +L G+ Y+H I
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADSD-FKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGI 177
Query: 172 IHRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
+HRD+KP+N LV N + VK+ DFG+++ +
Sbjct: 178 LHRDLKPANCLV-NQDCSVKVCDFGLARTV 206
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ YL K +
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 147
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
HRD+ N ++ + VK+ADFG+++ M
Sbjct: 148 HRDLAARNCML-DEKFTVKVADFGLARDM 175
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ YL K +
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 174
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
HRD+ N ++ + VK+ADFG+++ M
Sbjct: 175 HRDLAARNCML-DEKFTVKVADFGLARDM 202
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ YL K +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
HRD+ N ++ + VK+ADFG+++ M
Sbjct: 155 HRDLAARNCML-DEKFTVKVADFGLARDM 182
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 85/219 (38%), Gaps = 19/219 (8%)
Query: 99 EMEILRRTDSPF--IVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIA 156
E+ +L++ S F +++ FE+P + IL L + + G E
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCA 216
Q+L+ + + H ++HRDIK N+L++ N ++K+ DFG ++ ++ + GT
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRV 221
Query: 217 YMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGD 276
Y PE +WS G PF D + + F
Sbjct: 222 YSPPEWI----RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-----DEEIIRGQVFFR- 271
Query: 277 PPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFL 315
S E + I CL S R T ++ HP++
Sbjct: 272 -----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ YL K +
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 173
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
HRD+ N ++ + VK+ADFG+++ M
Sbjct: 174 HRDLAARNCML-DEKFTVKVADFGLARDM 201
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ YL K +
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
HRD+ N ++ + VK+ADFG+++ M
Sbjct: 151 HRDLAARNCML-DEKFTVKVADFGLARDM 178
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ YL K +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
HRD+ N ++ + VK+ADFG+++ M
Sbjct: 156 HRDLAARNCML-DEKFTVKVADFGLARDM 183
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ YL K +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 153
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
HRD+ N ++ + VK+ADFG+++ M
Sbjct: 154 HRDLAARNCML-DEKFTVKVADFGLARDM 181
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ YL K +
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 152
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
HRD+ N ++ + VK+ADFG+++ M
Sbjct: 153 HRDLAARNCML-DEKFTVKVADFGLARDM 180
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ YL K +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
HRD+ N ++ + VK+ADFG+++ M
Sbjct: 155 HRDLAARNCML-DEKFTVKVADFGLARDM 182
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ YL K +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIM 201
HRD+ N ++ + VK+ADFG+++ M
Sbjct: 156 HRDLAARNCML-DEKFTVKVADFGLARDM 183
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
LG G G V+ + K+ + G E +++ +V+ +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDKLVKLHAVV 79
Query: 119 EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHKIIHRDI 176
K I I+ E+M G+L D L + G+ PKL ++QI +G++++ IHRD+
Sbjct: 80 TKEP--IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXXXXXXXX 235
+ +N+LV + ++ KIADFG+++++ N Y P ++ P+
Sbjct: 138 RAANILV-SASLVCKIADFGLARVI-----EDNEYTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 236 XXDIWS 241
D+WS
Sbjct: 192 KSDVWS 197
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 8/190 (4%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ +L K +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDACNSYVGTCAYMSPERFDPDXXXXX 231
HRD+ N ++ + VK+ADFG+++ M + D+ ++ G A + + +
Sbjct: 157 HRDLAARNCML-DEKFTVKVADFGLARDMLDKEFDSVHNKTG--AKLPVKWMALESLQTQ 213
Query: 232 XXXXXXDIWS 241
D+WS
Sbjct: 214 KFTTKSDVWS 223
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 48/298 (16%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKV----VHGDADP-TVRRQVFREMEILRR 105
++ +L+ +G G G+V+K R IYA+K + G D R+V+ + +
Sbjct: 7 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH 66
Query: 106 TDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN----GTFSEPKLAHIASQILK 161
+ +V+ F + + + I EY + G+L +++N F E +L + Q+ +
Sbjct: 67 S---HVVRYFSAWAE-DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 162 GLSYLHGHKIIHRDIKPSNLLVN------------------NNNMQVKIADFG-VSKIMC 202
GL Y+H ++H DIKPSN+ ++ +N + KI D G V++I
Sbjct: 123 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 182
Query: 203 RSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQR 262
++ G +++ E + DI++ G P + G +
Sbjct: 183 PQVEE-----GDSRFLANEVLQEN----YTHLPKADIFA-LALTVVXAAGAEPLPRNGDQ 232
Query: 263 PDWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
W I G P +P S EF ++ + + +R +A L+ H L R
Sbjct: 233 --WHE----IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 284
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 79/151 (52%), Gaps = 9/151 (5%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRR-TDSP 109
D + ++ LG G V++ + ++ +K++ P + ++ RE++IL P
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKNKIKREIKILENLRGGP 92
Query: 110 FIVQCFGIFEKP-SGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLHG 168
I+ I + P S A++ E++++ L T ++ + +ILK L Y H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHS 149
Query: 169 HKIIHRDIKPSNLLVNNNNMQVKIADFGVSK 199
I+HRD+KP N+++++ + ++++ D+G+++
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 180
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 28/268 (10%)
Query: 58 VLGHGNGGTVYKVQHRCTHKI-YALKV-----VHGDADPTVRRQVFREMEILRRTDS--- 108
+LG G GTV+ HR T ++ A+KV V G + + E+ +L + +
Sbjct: 38 LLGKGGFGTVF-AGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG 96
Query: 109 -PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHIASQILKGLSYLH 167
P +++ FE G + +L + + L + + G E Q++ + + H
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH 156
Query: 168 GHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFDPDX 227
++HRDIK N+L++ K+ DFG ++ + + GT Y PE
Sbjct: 157 SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD--EPYTDFDGTRVYSPPEWIS--- 211
Query: 228 XXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDPPSLPDGASPE 287
+WS G PF + D L + F P SP+
Sbjct: 212 -RHQYHALPATVWSLGILLYDMVCGDIPFER-----DQEILEAELHF------PAHVSPD 259
Query: 288 FRSFIECCLQKEFSKRWTASQLLTHPFL 315
+ I CL + S R + ++L P++
Sbjct: 260 CCALIRRCLAPKPSSRPSLEEILLDPWM 287
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
LG G G V+ + K+ + G E +++ +V+ +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDKLVKLHAVV 252
Query: 119 EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHKIIHRDI 176
K I I+ E+M G+L D L + G+ PKL ++QI +G++++ IHRD+
Sbjct: 253 TKEP--IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD-PDXXXXXXXXX 235
+ +N+LV + ++ KIADFG+++++ N Y P ++ P+
Sbjct: 311 RAANILV-SASLVCKIADFGLARVI-----EDNEYTAREGAKFPIKWTAPEAINFGSFTI 364
Query: 236 XXDIWS 241
D+WS
Sbjct: 365 KSDVWS 370
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 8/190 (4%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ +L K +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDACNSYVGTCAYMSPERFDPDXXXXX 231
HRD+ N ++ + VK+ADFG+++ M + D+ ++ G A + + +
Sbjct: 157 HRDLAARNCML-DEKFTVKVADFGLARDMYDKEFDSVHNKTG--AKLPVKWMALESLQTQ 213
Query: 232 XXXXXXDIWS 241
D+WS
Sbjct: 214 KFTTKSDVWS 223
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 8/190 (4%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ +L K +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDACNSYVGTCAYMSPERFDPDXXXXX 231
HRD+ N ++ + VK+ADFG+++ M + D+ ++ G A + + +
Sbjct: 156 HRDLAARNCML-DEKFTVKVADFGLARDMYDKEFDSVHNKTG--AKLPVKWMALESLQTQ 212
Query: 232 XXXXXXDIWS 241
D+WS
Sbjct: 213 KFTTKSDVWS 222
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 8/190 (4%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ +L K +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDACNSYVGTCAYMSPERFDPDXXXXX 231
HRD+ N ++ + VK+ADFG+++ M + D+ ++ G A + + +
Sbjct: 156 HRDLAARNCML-DEKFTVKVADFGLARDMYDKEFDSVHNKTG--AKLPVKWMALESLQTQ 212
Query: 232 XXXXXXDIWS 241
D+WS
Sbjct: 213 KFTTKSDVWS 222
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 8/190 (4%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ +L K +
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 160
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDACNSYVGTCAYMSPERFDPDXXXXX 231
HRD+ N ++ + VK+ADFG+++ M + D+ ++ G A + + +
Sbjct: 161 HRDLAARNCML-DEKFTVKVADFGLARDMYDKEFDSVHNKTG--AKLPVKWMALESLQTQ 217
Query: 232 XXXXXXDIWS 241
D+WS
Sbjct: 218 KFTTKSDVWS 227
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ +L K +
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 214
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDACNSYVGT 214
HRD+ N ++ + VK+ADFG+++ M + D+ ++ G
Sbjct: 215 HRDLAARNCML-DEKFTVKVADFGLARDMYDKEFDSVHNKTGA 256
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 8/190 (4%)
Query: 57 QVLGHGNGGTVY--KVQHRCTHKIY-ALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+V+G G+ G VY + KI+ A+K ++ D Q E I++ P ++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLL-NKNGTFSEPKLAHIASQILKGLSYLHGHKII 172
GI + G +++ YM G L + N+ + L Q+ KG+ +L K +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 153
Query: 173 HRDIKPSNLLVNNNNMQVKIADFGVSKIMC-RSLDACNSYVGTCAYMSPERFDPDXXXXX 231
HRD+ N ++ + VK+ADFG+++ M + D+ ++ G A + + +
Sbjct: 154 HRDLAARNCML-DEKFTVKVADFGLARDMYDKEFDSVHNKTG--AKLPVKWMALESLQTQ 210
Query: 232 XXXXXXDIWS 241
D+WS
Sbjct: 211 KFTTKSDVWS 220
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 49 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 107
Query: 139 TLL----------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLL 182
L N S L A Q+ +G+ YL K IHRD+ N+L
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 167
Query: 183 VNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
V +N+ +KIADFG + R + + Y T P ++ P+ D+WS
Sbjct: 168 VTEDNV-MKIADFG----LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 222
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 122/298 (40%), Gaps = 48/298 (16%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKV----VHGDADP-TVRRQVFREMEILRR 105
++ +L+ +G G G+V+K R IYA+K + G D R+V+ + +
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH 68
Query: 106 TDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN----GTFSEPKLAHIASQILK 161
+ +V+ F + + + I EY + G+L +++N F E +L + Q+ +
Sbjct: 69 S---HVVRYFSAWAE-DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 162 GLSYLHGHKIIHRDIKPSNLLVN------------------NNNMQVKIADFG-VSKIMC 202
GL Y+H ++H DIKPSN+ ++ +N + KI D G V++I
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 184
Query: 203 RSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQR 262
++ G +++ E + DI++ G P + G +
Sbjct: 185 PQVEE-----GDSRFLANEVLQEN----YTHLPKADIFA-LALTVVCAAGAEPLPRNGDQ 234
Query: 263 PDWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
W I G P +P S EF ++ + + +R +A L+ H L R
Sbjct: 235 --WHE----IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 286
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 122/298 (40%), Gaps = 48/298 (16%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKV----VHGDADP-TVRRQVFREMEILRR 105
++ +L+ +G G G+V+K R IYA+K + G D R+V+ + +
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH 68
Query: 106 TDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN----GTFSEPKLAHIASQILK 161
+ +V+ F + + + I EY + G+L +++N F E +L + Q+ +
Sbjct: 69 S---HVVRYFSAWAE-DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 162 GLSYLHGHKIIHRDIKPSNLLVN------------------NNNMQVKIADFG-VSKIMC 202
GL Y+H ++H DIKPSN+ ++ +N + KI D G V++I
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 184
Query: 203 RSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQR 262
++ G +++ E + DI++ G P + G +
Sbjct: 185 PQVEE-----GDSRFLANEVLQEN----YTHLPKADIFA-LALTVVCAAGAEPLPRNGDQ 234
Query: 263 PDWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
W I G P +P S EF ++ + + +R +A L+ H L R
Sbjct: 235 --WHE----IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 286
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 122
Query: 139 TLL----------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLL 182
L N S L A Q+ +G+ YL K IHRD+ N+L
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 183 VNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
V +N+ +KIADFG + R + + Y T P ++ P+ D+WS
Sbjct: 183 VTEDNV-MKIADFG----LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 57 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 115
Query: 139 TLL----------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLL 182
L N S L A Q+ +G+ YL K IHRD+ N+L
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 175
Query: 183 VNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
V +N+ +KIADFG + R + + Y T P ++ P+ D+WS
Sbjct: 176 VTEDNV-MKIADFG----LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 230
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 53 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 111
Query: 139 TLL----------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLL 182
L N S L A Q+ +G+ YL K IHRD+ N+L
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 171
Query: 183 VNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
V +N+ +KIADFG + R + + Y T P ++ P+ D+WS
Sbjct: 172 VTEDNV-MKIADFG----LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 226
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 122/298 (40%), Gaps = 48/298 (16%)
Query: 51 SDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKV----VHGDADP-TVRRQVFREMEILRR 105
++ +L+ +G G G+V+K R IYA+K + G D R+V+ + +
Sbjct: 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH 70
Query: 106 TDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN----GTFSEPKLAHIASQILK 161
+ +V+ F + + + I EY + G+L +++N F E +L + Q+ +
Sbjct: 71 S---HVVRYFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 162 GLSYLHGHKIIHRDIKPSNLLVN------------------NNNMQVKIADFG-VSKIMC 202
GL Y+H ++H DIKPSN+ ++ +N + KI D G V++I
Sbjct: 127 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186
Query: 203 RSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQR 262
++ G +++ E + DI++ G P + G +
Sbjct: 187 PQVEE-----GDSRFLANEVLQEN----YTHLPKADIFA-LALTVVCAAGAEPLPRNGDQ 236
Query: 263 PDWATLMCAICFGDPPSLPDGASPEFRSFIECCLQKEFSKRWTASQLLTHPFLCKNRR 320
W I G P +P S EF ++ + + +R +A L+ H L R
Sbjct: 237 --WHE----IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 288
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 122
Query: 139 TLL----------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLL 182
L N S L A Q+ +G+ YL K IHRD+ N+L
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 183 VNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
V +N+ +KIADFG + R + + Y T P ++ P+ D+WS
Sbjct: 183 VTEDNV-MKIADFG----LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 56 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 114
Query: 139 TLL----------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLL 182
L N S L A Q+ +G+ YL K IHRD+ N+L
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 174
Query: 183 VNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
V +N+ +KIADFG + R + + Y T P ++ P+ D+WS
Sbjct: 175 VTEDNV-MKIADFG----LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 229
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 122
Query: 139 TLL----------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLL 182
L N S L A Q+ +G+ YL K IHRD+ N+L
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 183 VNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
V +N+ +KIADFG + R + + Y T P ++ P+ D+WS
Sbjct: 183 VTEDNV-MKIADFG----LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 59 LGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGIF 118
LG G G V+ + K+ + G E +++ +V+ +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDKLVKLHAVV 246
Query: 119 EKPSGDIAILMEYMDSGTL-DTLLNKNGTFSE-PKLAHIASQILKGLSYLHGHKIIHRDI 176
K I I+ E+M G+L D L + G+ PKL ++QI +G++++ IHRD+
Sbjct: 247 TKEP--IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 177 KPSNLLVNNNNMQVKIADFGVSKIMCR 203
+ +N+LV + ++ KIADFG++++ +
Sbjct: 305 RAANILV-SASLVCKIADFGLARVGAK 330
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 105 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 163
Query: 139 TLL----------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLL 182
L N S L A Q+ +G+ YL K IHRD+ N+L
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 223
Query: 183 VNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
V +N+ +KIADFG + R + + Y T P ++ P+ D+WS
Sbjct: 224 VTEDNV-MKIADFG----LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 278
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEI 102
+ ++ ++ LGHG G VY+ Q + + A+K + E I
Sbjct: 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 86
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHI 155
+ + + IV+C G+ + S ILME M G L + L + + + L H+
Sbjct: 87 ISKFNHQNIVRCIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYV- 212
A I G YL + IHRDI N L+ KI DFG+++ + R+ SY
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----SYYR 200
Query: 213 -GTCAYMSPERFDPDXXXXXXXXXXXDIWS 241
G CA + + P+ D WS
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 230
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
++GHG G VYK R K+ ALK ++ + E+E L P +V G
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFE-TEIETLSFCRHPHLVSLIG- 102
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNG----TFSEPKLAHIASQILKGLSYLHGHKIIH 173
F ++ ++ +YM++G L L + + S + I +GL YLH IIH
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIH 162
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYV---GTCAYMSPERF 223
RD+K N+L++ N + KI DFG+SK LD + GT Y+ PE F
Sbjct: 163 RDVKSINILLDENFVP-KITDFGISK-KGTELDQTHLXXVVKGTLGYIDPEYF 213
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 30/193 (15%)
Query: 54 EKLQVLGHGNGGTVYK-VQHRCTHKIYALKVVHG-DADPTVRRQVFREMEILRRTDSPFI 111
E + LG G G V + + H+ + A+K+V D R + +E L TD
Sbjct: 17 EIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNST 76
Query: 112 VQCFGIFE--KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHI---ASQILKGLSYL 166
+C + E + G I I+ E + T D + +NG F +L HI A QI K +++L
Sbjct: 77 FRCVQMLEWFEHHGHICIVFELLGLSTYD-FIKENG-FLPFRLDHIRKMAYQICKSVNFL 134
Query: 167 HGHKIIHRDIKPSNLLVNNN------------------NMQVKIADFGVSKIMCRSLDAC 208
H +K+ H D+KP N+L + N +K+ DFG + +
Sbjct: 135 HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY---DDEHH 191
Query: 209 NSYVGTCAYMSPE 221
++ V T Y +PE
Sbjct: 192 STLVSTRHYRAPE 204
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 52 DLEKLQVLGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEILRRT 106
++ ++ LGHG G VY+ Q + + A+K + E I+ +
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHIASQI 159
+ IV+C G+ + S ILME M G L + L + + + L H+A I
Sbjct: 106 NHQNIVRCIGVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYV--GTC 215
G YL + IHRDI N L+ KI DFG+++ + R+ SY G C
Sbjct: 165 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----SYYRKGGC 219
Query: 216 AYMSPERFDPDXXXXXXXXXXXDIWS 241
A + + P+ D WS
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWS 245
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 122
Query: 139 TLL----------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSNLL 182
L N S L A Q+ +G+ YL K IHRD+ N+L
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 182
Query: 183 VNNNNMQVKIADFGVSK 199
V +N+ +KIADFG+++
Sbjct: 183 VTEDNV-MKIADFGLAR 198
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 36/220 (16%)
Query: 52 DLEKLQVLGHGNGG-----TVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRT 106
+LE +VLG G G T Y + A+K++ AD + R + E++++ +
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 107 DS-PFIVQCFGIFEKPSGDIAILMEYMDSGTL-DTLLNKNGTFSEPKLAH---------- 154
S IV G SG I ++ EY G L + L +K FSE ++ +
Sbjct: 106 GSHENIVNLLGAC-TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 155 ------------IASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSK-IM 201
A Q+ KG+ +L +HRD+ N+LV + + VKI DFG+++ IM
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKV-VKICDFGLARDIM 223
Query: 202 CRSLDACNSYVGTCAYMSPERFDPDXXXXXXXXXXXDIWS 241
S N V A + + P+ D+WS
Sbjct: 224 SDS----NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWS 259
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 28/209 (13%)
Query: 52 DLEKLQVLGHGNGGTVYKVQ--------HRCTHKIYALKVVHGDADPTVRRQVFREMEIL 103
++ ++ LGHG G VY+ Q + L V+ + D E I+
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQD---ELDFLMEALII 102
Query: 104 RRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHIA 156
+ + IV+C G+ + S IL+E M G L + L + + + L H+A
Sbjct: 103 SKFNHQNIVRCIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 157 SQILKGLSYLHGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYV-- 212
I G YL + IHRDI N L+ KI DFG+++ + R+ SY
Sbjct: 162 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----SYYRK 216
Query: 213 GTCAYMSPERFDPDXXXXXXXXXXXDIWS 241
G CA + + P+ D WS
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWS 245
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 58 VLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFGI 117
++GHG G VYK R K+ ALK ++ + E+E L P +V G
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFE-TEIETLSFCRHPHLVSLIG- 102
Query: 118 FEKPSGDIAILMEYMDSGTLDTLLNKNG----TFSEPKLAHIASQILKGLSYLHGHKIIH 173
F ++ ++ +YM++G L L + + S + I +GL YLH IIH
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIH 162
Query: 174 RDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYV-----GTCAYMSPERF 223
RD+K N+L++ N + KI DFG+SK + + +++ GT Y+ PE F
Sbjct: 163 RDVKSINILLDENFVP-KITDFGISK---KGTELGQTHLXXVVKGTLGYIDPEYF 213
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 29/208 (13%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
A+ + + G G V KV A+K++ A + + E++I+
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKV---------AVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 109 -PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--------------NGTFSEPKLA 153
IV G G + ++ EY G L L + N T S L
Sbjct: 109 HENIVNLLGACTH-GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 154 HIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVG 213
H +SQ+ +G+++L IHRD+ N+L+ N ++ KI DFG+++ + ++ N V
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV-AKIGDFGLARDI---MNDSNYIVK 223
Query: 214 TCAYMSPERFDPDXXXXXXXXXXXDIWS 241
A + + P+ D+WS
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWS 251
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 27/191 (14%)
Query: 52 DLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVH--GDADPTVRRQVFREMEILRRTDSP 109
+L+ L+++G G G VYK + A+KV + + ++R + +
Sbjct: 14 NLKLLELIGRGRYGAVYK--GSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIAR 71
Query: 110 FIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKNGT--FSEPKLAHIASQILKGLSYLH 167
FIV + + ++MEY +G+L L+ + + S +LAH + +GL+YLH
Sbjct: 72 FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAH---SVTRGLAYLH 128
Query: 168 GH---------KIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMC--------RSLDACNS 210
I HRD+ N+LV N+ V I+DFG+S + +A S
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCV-ISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 211 YVGTCAYMSPE 221
VGT YM+PE
Sbjct: 188 EVGTIRYMAPE 198
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 22/206 (10%)
Query: 52 DLEKLQVLGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEILRRT 106
++ ++ LGHG G VY+ Q + + A+K + E I+ +
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 107 DSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHIASQI 159
+ IV+C G+ + S IL+E M G L + L + + + L H+A I
Sbjct: 106 NHQNIVRCIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 160 LKGLSYLHGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYV--GTC 215
G YL + IHRDI N L+ KI DFG+++ + R+ SY G C
Sbjct: 165 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----SYYRKGGC 219
Query: 216 AYMSPERFDPDXXXXXXXXXXXDIWS 241
A + + P+ D WS
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWS 245
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 35/210 (16%)
Query: 59 LGHGNGGTVYKVQHRCTHK-------IYALKVVHGDADPTVRRQVFREMEILRRTDS-PF 110
LG G G V + K A+K++ DA + EME+++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLL------------------NKNGTFSEPKL 152
I+ G + G + +++EY G L L + TF + L
Sbjct: 103 IINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD--L 159
Query: 153 AHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYV 212
Q+ +G+ YL K IHRD+ N+LV NN+ +KIADFG + R ++ + Y
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFG----LARDINNIDYYK 214
Query: 213 GTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
T P ++ P+ D+WS
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEI 102
+ ++ ++ LGHG G VY+ Q + + A+K + E I
Sbjct: 19 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 78
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHI 155
+ + + IV+C G+ + S IL+E M G L + L + + + L H+
Sbjct: 79 ISKFNHQNIVRCIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYV- 212
A I G YL + IHRDI N L+ KI DFG+++ + R+ SY
Sbjct: 138 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----SYYR 192
Query: 213 -GTCAYMSPERFDPDXXXXXXXXXXXDIWS 241
G CA + + P+ D WS
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 222
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEI 102
+ ++ ++ LGHG G VY+ Q + + A+K + E I
Sbjct: 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 86
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHI 155
+ + + IV+C G+ + S IL+E M G L + L + + + L H+
Sbjct: 87 ISKFNHQNIVRCIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYV- 212
A I G YL + IHRDI N L+ KI DFG+++ + R+ SY
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----SYYR 200
Query: 213 -GTCAYMSPERFDPDXXXXXXXXXXXDIWS 241
G CA + + P+ D WS
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 230
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LGHG G VY+ Q + + A+K + E I+ + + IV+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHIASQILKGLSYL 166
C G+ + S IL+E M G L + L + + + L H+A I G YL
Sbjct: 99 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 167 HGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYV--GTCAYMSPER 222
+ IHRDI N L+ KI DFG+++ + R+ SY G CA + +
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----SYYRKGGCAMLPVKW 212
Query: 223 FDPDXXXXXXXXXXXDIWS 241
P+ D WS
Sbjct: 213 MPPEAFMEGIFTSKTDTWS 231
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 27/168 (16%)
Query: 54 EKLQVLGHGNGGTVYK-VQHRCTHKIYALKVVHG-DADPTVRRQVFREMEILRRTDSPFI 111
E + LG G G V + + H+ + A+K+V D R + +E L TD
Sbjct: 17 EIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNST 76
Query: 112 VQCFGIFE--KPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAHI---ASQILKGLSYL 166
+C + E + G I I+ E + T D + +NG F +L HI A QI K +++L
Sbjct: 77 FRCVQMLEWFEHHGHICIVFELLGLSTYD-FIKENG-FLPFRLDHIRKMAYQICKSVNFL 134
Query: 167 HGHKIIHRDIKPSNLLVNNN------------------NMQVKIADFG 196
H +K+ H D+KP N+L + N +K+ DFG
Sbjct: 135 HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 58 AVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 116
Query: 139 TLL------------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSN 180
L + TF + L Q+ +G+ YL K IHRD+ N
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKD--LVSCTYQLARGMEYLASQKCIHRDLTARN 174
Query: 181 LLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDI 239
+LV NN+ +KIADFG++ R ++ + Y T P ++ P+ D+
Sbjct: 175 VLVTENNV-MKIADFGLA----RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 229
Query: 240 WS 241
WS
Sbjct: 230 WS 231
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 28/182 (15%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 117 AVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 175
Query: 139 TLL------------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSN 180
L + TF + L Q+ +G+ YL K IHRD+ N
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKD--LVSCTYQLARGMEYLASQKCIHRDLAARN 233
Query: 181 LLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDI 239
+LV NN+ +KIADFG + R ++ + Y T P ++ P+ D+
Sbjct: 234 VLVTENNV-MKIADFG----LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 288
Query: 240 WS 241
WS
Sbjct: 289 WS 290
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 35/210 (16%)
Query: 59 LGHGNGGTVYKVQHRCTHK-------IYALKVVHGDADPTVRRQVFREMEILRRTDS-PF 110
LG G G V + K A+K++ DA + EME+++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLL------------------NKNGTFSEPKL 152
I+ G + G + +++EY G L L + TF + L
Sbjct: 103 IINLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD--L 159
Query: 153 AHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYV 212
Q+ +G+ YL K IHRD+ N+LV NN+ +KIADFG + R ++ + Y
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFG----LARDINNIDYYK 214
Query: 213 GTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
T P ++ P+ D+WS
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 35/210 (16%)
Query: 59 LGHGNGGTVYKVQHRCTHK-------IYALKVVHGDADPTVRRQVFREMEILRRTDS-PF 110
LG G G V + K A+K++ DA + EME+++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLL------------------NKNGTFSEPKL 152
I+ G + G + +++EY G L L + TF + L
Sbjct: 103 IIHLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD--L 159
Query: 153 AHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYV 212
Q+ +G+ YL K IHRD+ N+LV NN+ +KIADFG + R ++ + Y
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFG----LARDINNIDYYK 214
Query: 213 GTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
T P ++ P+ D+WS
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 60 AVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 118
Query: 139 TLL------------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSN 180
L + TF + L Q+ +G+ YL K IHRD+ N
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKD--LVSCTYQLARGMEYLASQKCIHRDLAARN 176
Query: 181 LLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDI 239
+LV NN+ +KIADFG++ R ++ + Y T P ++ P+ D+
Sbjct: 177 VLVTENNV-MKIADFGLA----RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 231
Query: 240 WS 241
WS
Sbjct: 232 WS 233
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LGHG G VY+ Q + + A+K + E I+ + + IV+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHIASQILKGLSYL 166
C G+ + S IL+E M G L + L + + + L H+A I G YL
Sbjct: 115 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 167 HGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYV--GTCAYMSPER 222
+ IHRDI N L+ KI DFG+++ + R+ SY G CA + +
Sbjct: 174 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----SYYRKGGCAMLPVKW 228
Query: 223 FDPDXXXXXXXXXXXDIWS 241
P+ D WS
Sbjct: 229 MPPEAFMEGIFTSKTDTWS 247
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 35/210 (16%)
Query: 59 LGHGNGGTVYKVQHRCTHK-------IYALKVVHGDADPTVRRQVFREMEILRRTDS-PF 110
LG G G V + K A+K++ DA + EME+++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 111 IVQCFGIFEKPSGDIAILMEYMDSGTLDTLL------------------NKNGTFSEPKL 152
I+ G + G + +++EY G L L + TF + L
Sbjct: 103 IITLLGACTQ-DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD--L 159
Query: 153 AHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYV 212
Q+ +G+ YL K IHRD+ N+LV NN+ +KIADFG + R ++ + Y
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV-MKIADFG----LARDINNIDYYK 214
Query: 213 GTCAYMSPERF-DPDXXXXXXXXXXXDIWS 241
T P ++ P+ D+WS
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 22/210 (10%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEI 102
+ ++ ++ LGHG G VY+ Q + + A+K + E I
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 87
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHI 155
+ + + IV+C G+ + S IL+E M G L + L + + + L H+
Sbjct: 88 ISKFNHQNIVRCIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYV- 212
A I G YL + IHRDI N L+ KI DFG+++ + R+ SY
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----SYYR 201
Query: 213 -GTCAYMSPERFDPDXXXXXXXXXXXDIWS 241
G CA + + P+ D WS
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 231
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 80 ALKVVHGDADPTVRRQVFREMEILRRTDS-PFIVQCFGIFEKPSGDIAILMEYMDSGTLD 138
A+K++ DA + EME+++ I+ G + G + +++EY G L
Sbjct: 63 AVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYVIVEYASKGNLR 121
Query: 139 TLL------------------NKNGTFSEPKLAHIASQILKGLSYLHGHKIIHRDIKPSN 180
L + TF + L Q+ +G+ YL K IHRD+ N
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKD--LVSCTYQLARGMEYLASQKCIHRDLAARN 179
Query: 181 LLVNNNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERF-DPDXXXXXXXXXXXDI 239
+LV NN+ +KIADFG++ R ++ + Y T P ++ P+ D+
Sbjct: 180 VLVTENNV-MKIADFGLA----RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 234
Query: 240 WS 241
WS
Sbjct: 235 WS 236
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 78/197 (39%), Gaps = 18/197 (9%)
Query: 59 LGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LGHG G VY+ Q + + A+K + E I+ + + IV+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHIASQILKGLSYL 166
C G+ + S IL+E M G L + L + + + L H+A I G YL
Sbjct: 125 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 167 HGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
+ IHRDI N L+ KI DFG+++ + R A G CA + +
Sbjct: 184 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---ASYYRKGGCAMLPVKWMP 240
Query: 225 PDXXXXXXXXXXXDIWS 241
P+ D WS
Sbjct: 241 PEAFMEGIFTSKTDTWS 257
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
++LG+G+ GTV Q + A+K + D E+++L +D V +
Sbjct: 39 KILGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY 93
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAH------IASQILKGLSYLHGHK 170
E + I +E + D + +KN + KL + QI G+++LH K
Sbjct: 94 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 153
Query: 171 IIHRDIKPSNLLVNNN------------NMQVKIADFGVSKIMCRSLDA--------CNS 210
IIHRD+KP N+LV+ + N+++ I+DFG +C+ LD+ N+
Sbjct: 154 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG----LCKKLDSGQXXFRXNLNN 209
Query: 211 YVGTCAYMSPE 221
GT + +PE
Sbjct: 210 PSGTSGWRAPE 220
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LGHG G VY+ Q + + A+K + E I+ + + IV+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHIASQILKGLSYL 166
C G+ + S IL+E M G L + L + + + L H+A I G YL
Sbjct: 105 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 167 HGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYV--GTCAYMSPER 222
+ IHRDI N L+ KI DFG+++ + R+ SY G CA + +
Sbjct: 164 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----SYYRKGGCAMLPVKW 218
Query: 223 FDPDXXXXXXXXXXXDIWS 241
P+ D WS
Sbjct: 219 MPPEAFMEGIFTSKTDTWS 237
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 22/199 (11%)
Query: 59 LGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LGHG G VY+ Q + + A+K + E I+ + + IV+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHIASQILKGLSYL 166
C G+ + S IL+E M G L + L + + + L H+A I G YL
Sbjct: 99 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 167 HGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYV--GTCAYMSPER 222
+ IHRDI N L+ KI DFG+++ + R+ SY G CA + +
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA-----SYYRKGGCAMLPVKW 212
Query: 223 FDPDXXXXXXXXXXXDIWS 241
P+ D WS
Sbjct: 213 MPPEAFMEGIFTSKTDTWS 231
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
++LG+G+ GTV Q + A+K + D E+++L +D V +
Sbjct: 39 KILGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY 93
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAH------IASQILKGLSYLHGHK 170
E + I +E + D + +KN + KL + QI G+++LH K
Sbjct: 94 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 153
Query: 171 IIHRDIKPSNLLVNNN------------NMQVKIADFGVSKIMCRSLDA--------CNS 210
IIHRD+KP N+LV+ + N+++ I+DFG +C+ LD+ N+
Sbjct: 154 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG----LCKKLDSGQXXFRXNLNN 209
Query: 211 YVGTCAYMSPE 221
GT + +PE
Sbjct: 210 PSGTSGWRAPE 220
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 29/208 (13%)
Query: 49 AYSDLEKLQVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDS 108
A+ + + G G V KV A+K++ A + + E++I+
Sbjct: 58 AFGKVVEATAFGLGKEDAVLKV---------AVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 109 -PFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNK--------------NGTFSEPKLA 153
IV G G + ++ EY G L L + N T S L
Sbjct: 109 HENIVNLLGACTH-GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 154 HIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVG 213
H +SQ+ +G+++L IHRD+ N+L+ N ++ KI DFG+++ + ++ N V
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV-AKIGDFGLARDI---MNDSNYIVK 223
Query: 214 TCAYMSPERFDPDXXXXXXXXXXXDIWS 241
A + + P+ D+WS
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWS 251
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
++LG+G+ GTV Q + A+K + D E+++L +D V +
Sbjct: 21 KILGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY 75
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAH------IASQILKGLSYLHGHK 170
E + I +E + D + +KN + KL + QI G+++LH K
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 135
Query: 171 IIHRDIKPSNLLVNNN------------NMQVKIADFGVSKIMCRSLDA--------CNS 210
IIHRD+KP N+LV+ + N+++ I+DFG +C+ LD+ N+
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG----LCKKLDSGQXXFRXNLNN 191
Query: 211 YVGTCAYMSPE 221
GT + +PE
Sbjct: 192 PSGTSGWRAPE 202
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 57 QVLGHGNGGTVYKVQHRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQCFG 116
++LG+G+ GTV Q + A+K + D E+++L +D V +
Sbjct: 21 KILGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY 75
Query: 117 IFEKPSGDIAILMEYMDSGTLDTLLNKNGTFSEPKLAH------IASQILKGLSYLHGHK 170
E + I +E + D + +KN + KL + QI G+++LH K
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 135
Query: 171 IIHRDIKPSNLLVNNN------------NMQVKIADFGVSKIMCRSLDA--------CNS 210
IIHRD+KP N+LV+ + N+++ I+DFG +C+ LD+ N+
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG----LCKKLDSGQSSFRTNLNN 191
Query: 211 YVGTCAYMSPE 221
GT + +PE
Sbjct: 192 PSGTSGWRAPE 202
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 48 IAYSDLEKLQVLGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEI 102
+ ++ ++ LGHG G VY+ Q + + A+K + E I
Sbjct: 45 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 104
Query: 103 LRRTDSPFIVQCFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHI 155
+ + + IV+C G+ + S IL+E M G L + L + + + L H+
Sbjct: 105 ISKFNHQNIVRCIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 156 ASQILKGLSYLHGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVG 213
A I G YL + IHRDI N L+ KI DFG+++ + R A G
Sbjct: 164 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---AGYYRKG 220
Query: 214 TCAYMSPERFDPDXXXXXXXXXXXDIWS 241
CA + + P+ D WS
Sbjct: 221 GCAMLPVKWMPPEAFMEGIFTSKTDTWS 248
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 78/197 (39%), Gaps = 18/197 (9%)
Query: 59 LGHGNGGTVYKVQ-----HRCTHKIYALKVVHGDADPTVRRQVFREMEILRRTDSPFIVQ 113
LGHG G VY+ Q + + A+K + E I+ + + IV+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 114 CFGIFEKPSGDIAILMEYMDSGTLDTLLNKN-------GTFSEPKLAHIASQILKGLSYL 166
C G+ + S IL+E M G L + L + + + L H+A I G YL
Sbjct: 139 CIGVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 167 HGHKIIHRDIKPSNLLVN--NNNMQVKIADFGVSKIMCRSLDACNSYVGTCAYMSPERFD 224
+ IHRDI N L+ KI DFG+++ + R A G CA + +
Sbjct: 198 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---AGYYRKGGCAMLPVKWMP 254
Query: 225 PDXXXXXXXXXXXDIWS 241
P+ D WS
Sbjct: 255 PEAFMEGIFTSKTDTWS 271
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 94 RQVFREMEILRRTDSPFIV---QCFGIFEKPS-GDIAILMEYMDSGTLDTLLNKNGTFSE 149
++V RE+ +L P I+ F FE+P+ + ++ E M + + ++ S
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 150 PKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACN 209
+ + IL GL LH ++HRD+ P N+L+ +NN + I DF +++ + DA
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN-DITICDFNLAR--EDTADANK 190
Query: 210 S-YVGTCAYMSPE 221
+ YV Y +PE
Sbjct: 191 THYVTHRWYRAPE 203
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 92/242 (38%), Gaps = 24/242 (9%)
Query: 56 LQVLGHGNGGTVYKVQHRCTHKIYALKVV--HGDADPTVRRQVFREMEILRRTDSPFIVQ 113
+Q LG G V V+ YALK + H D R + RE ++ R + P I++
Sbjct: 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD---REEAQREADMHRLFNHPNILR 90
Query: 114 CFGIFEKPSG---DIAILMEYMDSGTL----DTLLNKNGTFSEPKLAHIASQILKGLSYL 166
+ G + +L+ + GTL + L +K +E ++ + I +GL +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 167 HGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACNSYVG---------TCAY 217
H HRD+KP+N+L+ + V + D G C ++ + T +Y
Sbjct: 151 HAKGYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 218 MSPERFDPDXXXXXXXXXXXDIWSXXXXXXXXXXGHFPFLQPGQRPDWATLMCAICFGDP 277
+PE F D+WS G P+ Q+ D L P
Sbjct: 210 RAPELF--SVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP 267
Query: 278 PS 279
S
Sbjct: 268 QS 269
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 94 RQVFREMEILRRTDSPFIV---QCFGIFEKPS-GDIAILMEYMDSGTLDTLLNKNGTFSE 149
++V RE+ +L P I+ F FE+P+ + ++ E M + + ++ S
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 150 PKLAHIASQILKGLSYLHGHKIIHRDIKPSNLLVNNNNMQVKIADFGVSKIMCRSLDACN 209
+ + IL GL LH ++HRD+ P N+L+ +NN + I DF +++ + DA
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNN-DITICDFNLAR--EDTADANK 190
Query: 210 S-YVGTCAYMSPE 221
+ YV Y +PE
Sbjct: 191 THYVTHRWYRAPE 203
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.139 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,945,237
Number of Sequences: 62578
Number of extensions: 340359
Number of successful extensions: 3480
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 952
Number of HSP's gapped (non-prelim): 1277
length of query: 323
length of database: 14,973,337
effective HSP length: 99
effective length of query: 224
effective length of database: 8,778,115
effective search space: 1966297760
effective search space used: 1966297760
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)