Query 020658
Match_columns 323
No_of_seqs 133 out of 1417
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 04:08:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020658.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020658hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02280 IAA-amino acid hydrol 100.0 2.2E-55 4.8E-60 407.3 36.4 318 1-318 159-476 (478)
2 PLN02693 IAA-amino acid hydrol 100.0 4.8E-53 1E-57 389.5 36.6 316 1-319 109-424 (437)
3 COG1473 AbgB Metal-dependent a 100.0 6.1E-49 1.3E-53 351.4 35.4 311 3-318 78-391 (392)
4 PRK08588 succinyl-diaminopimel 100.0 2.1E-48 4.4E-53 355.4 30.0 300 1-317 66-377 (377)
5 TIGR01891 amidohydrolases amid 100.0 2.6E-46 5.5E-51 339.6 33.7 297 1-301 63-360 (363)
6 PRK06915 acetylornithine deace 100.0 1.1E-46 2.3E-51 348.9 29.3 299 1-319 100-421 (422)
7 PRK13013 succinyl-diaminopimel 100.0 2.2E-46 4.7E-51 347.5 30.2 297 1-318 91-424 (427)
8 TIGR01910 DapE-ArgE acetylorni 100.0 2.2E-46 4.7E-51 341.7 23.5 290 1-307 71-375 (375)
9 PRK07338 hypothetical protein; 100.0 2.9E-45 6.3E-50 337.4 30.4 293 1-318 99-400 (402)
10 PRK13009 succinyl-diaminopimel 100.0 3.2E-45 6.8E-50 334.4 29.2 295 1-316 65-374 (375)
11 TIGR01246 dapE_proteo succinyl 100.0 3.2E-45 7E-50 333.6 28.3 295 1-315 62-370 (370)
12 PRK13983 diaminopimelate amino 100.0 1.6E-45 3.4E-50 339.2 26.3 298 1-314 83-399 (400)
13 PRK06133 glutamate carboxypept 100.0 2.5E-44 5.3E-49 331.2 30.8 297 1-319 106-410 (410)
14 TIGR01880 Ac-peptdase-euk N-ac 100.0 2.5E-44 5.5E-49 330.8 29.0 302 1-317 78-399 (400)
15 PRK06837 acetylornithine deace 100.0 3.1E-44 6.8E-49 332.3 28.5 298 1-319 104-425 (427)
16 PRK08262 hypothetical protein; 100.0 8.6E-44 1.9E-48 334.6 29.8 304 1-317 118-485 (486)
17 PRK06446 hypothetical protein; 100.0 4.5E-44 9.7E-49 332.0 27.1 301 1-316 69-434 (436)
18 PRK08651 succinyl-diaminopimel 100.0 4.9E-44 1.1E-48 328.5 27.0 295 1-317 81-392 (394)
19 PRK09133 hypothetical protein; 100.0 7.9E-44 1.7E-48 333.7 28.0 297 1-317 108-470 (472)
20 PRK08596 acetylornithine deace 100.0 1.4E-43 3.1E-48 327.3 28.1 300 1-320 84-420 (421)
21 TIGR03526 selenium_YgeY putati 100.0 1.4E-43 2.9E-48 325.2 26.5 295 1-317 74-395 (395)
22 TIGR03320 ygeY M20/DapE family 100.0 1.4E-43 3.1E-48 325.2 26.6 295 1-317 74-395 (395)
23 PRK05111 acetylornithine deace 100.0 3.5E-43 7.6E-48 321.7 28.2 287 1-317 78-382 (383)
24 PRK00466 acetyl-lysine deacety 100.0 3.9E-43 8.4E-48 316.8 27.6 274 1-318 67-345 (346)
25 PRK13004 peptidase; Reviewed 100.0 2.7E-43 5.9E-48 323.6 26.8 298 1-318 76-398 (399)
26 TIGR01892 AcOrn-deacetyl acety 100.0 5.6E-43 1.2E-47 318.4 27.7 282 1-311 65-363 (364)
27 PRK08201 hypothetical protein; 100.0 1E-42 2.2E-47 325.0 27.8 301 1-316 86-454 (456)
28 PRK07473 carboxypeptidase; Pro 100.0 3.8E-42 8.2E-47 312.8 29.9 287 1-315 82-375 (376)
29 PRK07522 acetylornithine deace 100.0 1.2E-42 2.5E-47 318.5 26.6 287 1-316 71-384 (385)
30 PRK08737 acetylornithine deace 100.0 4.1E-42 8.9E-47 310.9 27.3 277 1-313 70-362 (364)
31 PRK08652 acetylornithine deace 100.0 7.9E-42 1.7E-46 308.9 27.0 280 1-317 62-346 (347)
32 TIGR01886 dipeptidase dipeptid 100.0 6.5E-42 1.4E-46 319.1 26.6 291 1-317 85-466 (466)
33 PRK09104 hypothetical protein; 100.0 1.5E-41 3.3E-46 317.6 27.9 301 1-316 89-462 (464)
34 COG0624 ArgE Acetylornithine d 100.0 1.2E-40 2.6E-45 307.3 28.9 303 1-317 82-408 (409)
35 PRK07079 hypothetical protein; 100.0 1.2E-40 2.7E-45 311.7 29.1 302 1-321 92-460 (469)
36 TIGR01900 dapE-gram_pos succin 100.0 1.8E-40 3.8E-45 301.8 28.7 276 1-297 59-373 (373)
37 PRK07906 hypothetical protein; 100.0 1E-40 2.2E-45 309.2 27.4 297 1-314 72-425 (426)
38 PRK07907 hypothetical protein; 100.0 1.6E-40 3.5E-45 309.4 28.1 301 1-316 90-447 (449)
39 KOG2275 Aminoacylase ACY1 and 100.0 2.6E-40 5.7E-45 287.0 25.6 301 1-317 95-419 (420)
40 PRK05469 peptidase T; Provisio 100.0 4.1E-40 8.9E-45 303.4 28.2 267 26-318 138-407 (408)
41 PRK13381 peptidase T; Provisio 100.0 4.7E-40 1E-44 302.6 27.2 270 20-316 123-403 (404)
42 PRK12891 allantoate amidohydro 100.0 1.4E-39 3E-44 300.0 29.9 286 1-319 83-412 (414)
43 PRK07318 dipeptidase PepV; Rev 100.0 2.4E-40 5.3E-45 309.3 25.2 293 1-317 86-466 (466)
44 PRK13007 succinyl-diaminopimel 100.0 5.9E-40 1.3E-44 297.1 26.2 272 1-312 68-351 (352)
45 PRK04443 acetyl-lysine deacety 100.0 6.7E-40 1.4E-44 295.8 25.8 274 1-315 66-348 (348)
46 TIGR01883 PepT-like peptidase 100.0 2.1E-39 4.6E-44 294.5 26.7 281 1-312 69-360 (361)
47 PRK12892 allantoate amidohydro 100.0 6.7E-39 1.4E-43 296.0 30.3 285 1-317 81-411 (412)
48 PRK07205 hypothetical protein; 100.0 1.8E-39 3.9E-44 302.0 26.2 295 1-318 82-444 (444)
49 PRK12893 allantoate amidohydro 100.0 6.1E-39 1.3E-43 296.2 29.0 285 1-317 83-410 (412)
50 PRK09290 allantoate amidohydro 100.0 2.5E-38 5.5E-43 291.8 31.7 286 1-318 80-412 (413)
51 PRK06156 hypothetical protein; 100.0 3.9E-39 8.4E-44 304.1 26.2 296 1-317 116-516 (520)
52 TIGR01882 peptidase-T peptidas 100.0 6.6E-39 1.4E-43 295.0 25.8 271 21-317 135-408 (410)
53 TIGR01902 dapE-lys-deAc N-acet 100.0 7.5E-39 1.6E-43 287.8 25.5 274 1-318 57-336 (336)
54 PRK12890 allantoate amidohydro 100.0 3.2E-37 6.9E-42 284.7 31.5 283 1-317 81-412 (414)
55 TIGR01879 hydantase amidase, h 100.0 4.8E-37 1E-41 282.1 28.8 283 1-315 74-401 (401)
56 TIGR01887 dipeptidaselike dipe 100.0 1.9E-37 4.1E-42 287.0 25.1 287 1-312 74-447 (447)
57 PRK08554 peptidase; Reviewed 100.0 1.7E-35 3.7E-40 273.5 24.6 297 1-317 70-438 (438)
58 TIGR03176 AllC allantoate amid 100.0 1.3E-34 2.8E-39 265.5 29.9 271 30-317 90-404 (406)
59 TIGR01893 aa-his-dipept aminoa 100.0 6.2E-35 1.3E-39 273.5 26.6 289 1-315 69-476 (477)
60 PRK15026 aminoacyl-histidine d 100.0 2.3E-34 5E-39 267.8 27.2 289 1-316 75-483 (485)
61 PRK13799 unknown domain/N-carb 100.0 1E-33 2.2E-38 269.7 29.7 286 1-317 258-590 (591)
62 PRK13590 putative bifunctional 100.0 1.4E-33 3E-38 269.1 29.5 285 1-318 258-589 (591)
63 KOG2276 Metalloexopeptidases [ 100.0 7E-30 1.5E-34 220.1 21.8 303 1-317 98-472 (473)
64 PF01546 Peptidase_M20: Peptid 99.9 4.1E-24 8.9E-29 176.5 8.6 172 1-313 4-188 (189)
65 COG2195 PepD Di- and tripeptid 99.9 4.5E-21 9.8E-26 172.2 16.8 265 24-316 140-412 (414)
66 PF07687 M20_dimer: Peptidase 99.8 5.1E-19 1.1E-23 133.1 12.8 104 104-207 2-110 (111)
67 COG4187 RocB Arginine degradat 99.4 3.2E-12 6.9E-17 112.6 11.2 200 1-205 85-326 (553)
68 TIGR03106 trio_M42_hydro hydro 98.7 1.5E-07 3.2E-12 84.3 12.7 49 19-67 172-222 (343)
69 PRK10199 alkaline phosphatase 98.5 4.5E-07 9.7E-12 80.3 9.6 69 1-74 116-188 (346)
70 PRK09961 exoaminopeptidase; Pr 98.5 3.3E-06 7.2E-11 75.9 13.4 77 229-315 254-333 (344)
71 PRK09864 putative peptidase; P 98.1 6.8E-05 1.5E-09 67.3 14.0 77 229-315 262-341 (356)
72 PF04389 Peptidase_M28: Peptid 97.5 0.00014 3E-09 59.2 5.1 57 31-87 29-88 (179)
73 TIGR03107 glu_aminopep glutamy 97.4 0.00026 5.7E-09 63.6 5.5 78 228-316 262-342 (350)
74 COG1363 FrvX Cellulase M and r 96.8 0.003 6.5E-08 56.5 5.9 79 229-317 267-348 (355)
75 PF05343 Peptidase_M42: M42 gl 96.7 0.0039 8.4E-08 54.8 6.5 64 19-87 123-189 (292)
76 TIGR03107 glu_aminopep glutamy 96.5 0.0094 2E-07 53.7 7.2 65 21-90 169-236 (350)
77 COG1363 FrvX Cellulase M and r 96.3 0.0095 2.1E-07 53.3 5.9 65 20-89 170-237 (355)
78 KOG2194 Aminopeptidases of the 94.8 0.036 7.9E-07 54.5 4.5 56 32-87 167-224 (834)
79 PF05343 Peptidase_M42: M42 gl 94.7 0.023 5.1E-07 49.9 2.7 70 228-307 220-292 (292)
80 TIGR01893 aa-his-dipept aminoa 93.9 0.33 7.1E-06 46.0 8.8 44 154-203 336-379 (477)
81 COG2234 Iap Predicted aminopep 93.1 0.2 4.3E-06 46.8 5.8 44 31-76 231-275 (435)
82 PF05450 Nicastrin: Nicastrin; 91.8 0.64 1.4E-05 39.4 6.8 43 31-73 27-73 (234)
83 PTZ00371 aspartyl aminopeptida 91.1 0.48 1E-05 44.5 5.8 82 229-319 373-459 (465)
84 PRK02256 putative aminopeptida 90.2 0.38 8.2E-06 45.1 4.2 75 230-313 381-460 (462)
85 PRK02813 putative aminopeptida 87.2 0.99 2.1E-05 42.0 4.8 76 229-313 346-426 (428)
86 KOG2195 Transferrin receptor a 76.8 6.4 0.00014 39.0 6.1 44 31-74 373-420 (702)
87 PRK15026 aminoacyl-histidine d 75.3 32 0.00068 32.8 10.3 75 156-241 344-419 (485)
88 cd06406 PB1_P67 A PB1 domain i 73.8 20 0.00043 24.7 6.2 57 175-236 8-64 (80)
89 PRK02256 putative aminopeptida 68.3 8.9 0.00019 36.1 4.8 42 21-66 251-294 (462)
90 PF06675 DUF1177: Protein of u 59.8 53 0.0012 28.0 7.2 60 30-89 57-131 (276)
91 cd06408 PB1_NoxR The PB1 domai 56.8 66 0.0014 22.6 6.4 57 179-242 13-69 (86)
92 PRK06156 hypothetical protein; 51.2 1.3E+02 0.0028 29.0 9.6 29 157-187 240-268 (520)
93 PRK02813 putative aminopeptida 47.6 28 0.0006 32.6 4.3 41 21-66 225-267 (428)
94 PTZ00371 aspartyl aminopeptida 46.0 36 0.00079 32.2 4.8 46 21-66 242-290 (465)
95 cd06411 PB1_p51 The PB1 domain 42.8 97 0.0021 21.3 5.2 32 175-206 4-35 (78)
96 KOG2526 Predicted aminopeptida 39.1 70 0.0015 29.7 5.2 62 26-87 234-304 (555)
97 PF03668 ATP_bind_2: P-loop AT 34.7 67 0.0015 28.1 4.3 30 157-187 161-190 (284)
98 PRK13562 acetolactate synthase 33.8 1.7E+02 0.0036 20.5 5.3 44 157-202 27-70 (84)
99 PF03755 YicC_N: YicC-like fam 28.8 2.9E+02 0.0063 21.7 7.2 64 177-244 30-94 (159)
100 PF09650 PHA_gran_rgn: Putativ 25.4 1.7E+02 0.0036 20.5 4.3 34 181-214 2-35 (87)
101 TIGR03687 pupylate_cterm ubiqu 24.7 1.4E+02 0.0029 16.6 2.8 20 188-207 3-22 (33)
102 TIGR01887 dipeptidaselike dipe 24.5 1.4E+02 0.003 28.2 4.9 24 161-184 194-217 (447)
103 cd04870 ACT_PSP_1 CT domains f 23.3 2.3E+02 0.005 18.7 5.2 37 174-214 37-73 (75)
104 cd06407 PB1_NLP A PB1 domain i 22.7 2.6E+02 0.0057 19.3 4.9 60 179-243 11-70 (82)
105 TIGR01886 dipeptidase dipeptid 22.4 5.5E+02 0.012 24.2 8.6 23 160-182 204-226 (466)
106 PRK04439 S-adenosylmethionine 22.3 4.7E+02 0.01 24.2 7.5 74 128-204 304-380 (399)
107 cd04871 ACT_PSP_2 ACT domains 21.3 2.6E+02 0.0057 19.2 4.7 37 173-214 46-82 (84)
108 TIGR02159 PA_CoA_Oxy4 phenylac 20.7 4E+02 0.0086 20.7 6.0 65 174-249 25-90 (146)
109 cd04869 ACT_GcvR_2 ACT domains 20.3 2.7E+02 0.0059 18.4 4.9 38 173-214 42-79 (81)
No 1
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=2.2e-55 Score=407.26 Aligned_cols=318 Identities=56% Similarity=0.941 Sum_probs=279.8
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCccHHHHHHcCCCCCc
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENV 80 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~ 80 (323)
||+|+||+.+..+|+|+|+++|++||||||++++++++|+++|++++.+++++|.|+|++|||+|.|+++|+++|.++++
T Consensus 159 gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~ 238 (478)
T PLN02280 159 ADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDV 238 (478)
T ss_pred EecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCC
Confidence 79999999887789999999999999999999999999999999888788999999999999998899999999998888
Q ss_pred ceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEE
Q 020658 81 EAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSV 160 (323)
Q Consensus 81 d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v 160 (323)
|+++++|+.+.+|.+.+..+.+...+|..+++|+++|+++|+|.|+.|+||+..|++++..|+++..+...+....++++
T Consensus 239 d~~~~~h~~~~~p~g~ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnv 318 (478)
T PLN02280 239 EAIFAVHVSHEHPTAVIGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSV 318 (478)
T ss_pred CEEEEEecCCCCCCceeEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEE
Confidence 99999998766777777766677778999999999999999999999999999999999999887655545556678999
Q ss_pred EEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHH
Q 020658 161 AMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRV 240 (323)
Q Consensus 161 ~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 240 (323)
+.|+||...|+||++|++.+|+|+.|.++.+++.++|+++++..+..+++++++++.......+++..+++++++.++++
T Consensus 319 g~I~GG~~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~ 398 (478)
T PLN02280 319 TTMDGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGVFRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKV 398 (478)
T ss_pred EEEEccCCCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeccccCCCCCccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998888898887775322224577888899999999999
Q ss_pred HHHHhCCcccccCCCCCcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 020658 241 TAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 318 (323)
Q Consensus 241 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~~ 318 (323)
+.+.+|.+........+|++|+++|.+.+|++++++|+++..||....+|+++|++++++|..++++|+.++.+++..
T Consensus 399 a~~~~G~~~~~~~~~~~g~tD~~~~~~~vP~i~~glG~~~~~~G~~~~~Htp~e~id~~~L~~~~~~~~~~~~~~l~~ 476 (478)
T PLN02280 399 AIDLLGPANFTVVPPMMGAEDFSFYSQVVPAAFYYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAAVHAAIAERYLIE 476 (478)
T ss_pred HHHhcCccccccCCCCeeechHHHHHhhCCEEEEEEeecCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 988777654322235689999999999999988888987655565568999999999999999999999999998864
No 2
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=4.8e-53 Score=389.47 Aligned_cols=316 Identities=57% Similarity=0.919 Sum_probs=275.4
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCccHHHHHHcCCCCCc
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENV 80 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~ 80 (323)
||+|+||+.+.++|+|+|..+|++||||||++++++++|+++|++.+.+++++|.|+|++|||.++|++.++++|.+++.
T Consensus 109 ~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~~~~ 188 (437)
T PLN02693 109 ADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNV 188 (437)
T ss_pred eecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCCCCC
Confidence 79999999988889999988999999999999999999999999987778899999999999955699999999988777
Q ss_pred ceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEE
Q 020658 81 EAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSV 160 (323)
Q Consensus 81 d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v 160 (323)
|++++.|..+..+.|.+..+.|..++|..+++|+++|+++|+|.|+.|+|||..|++++..|+++..+..++....++++
T Consensus 189 ~~iig~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~ti~v 268 (437)
T PLN02693 189 EAIFGIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTV 268 (437)
T ss_pred CEEEEEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcEEEE
Confidence 88999888777777887777777788999999999999999999999999999999999999988655555556789999
Q ss_pred EEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHH
Q 020658 161 AMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRV 240 (323)
Q Consensus 161 ~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 240 (323)
+.|+||...|+||++|++.+|+|+.|.+ +.+.++|+++++..+..+++++++++.....++++++.+++++++.++++
T Consensus 269 g~i~GG~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~ 346 (437)
T PLN02693 269 SKVNGGNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAVHRCNASVNLTPNGREPMPPTVNNMDLYKQFKKV 346 (437)
T ss_pred EEEEcCCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHHhCCcEEEEEeecCccCCCCccCCHHHHHHHHHH
Confidence 9999999999999999999999999974 58999999999998888888888776432235677788899999999999
Q ss_pred HHHHhCCcccccCCCCCcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhcc
Q 020658 241 TAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNS 319 (323)
Q Consensus 241 ~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~~~ 319 (323)
+++++|.+++.......|++|+++|.+.+|++++++|++++. ......|+++|+++.+.+..++++|+.++.++++..
T Consensus 347 ~~~~~G~~~~~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~~-~~~~~~H~~~f~~de~~l~~~~~~~~~~~~~~l~~~ 424 (437)
T PLN02693 347 VRDLLGQEAFVEAAPEMGSEDFSYFAETIPGHFSLLGMQDET-NGYASSHSPLYRINEDVLPYGAAIHATMAVQYLKEK 424 (437)
T ss_pred HHHhcCCcceeecCCCceechHHHHHHHhhhhEEEEecCCCC-CCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 999889875422345679999999999999998889987531 112468999999999999999999999999998753
No 3
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=6.1e-49 Score=351.36 Aligned_cols=311 Identities=46% Similarity=0.753 Sum_probs=284.9
Q ss_pred CCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCccHHHHHHcCCCCC-cc
Q 020658 3 NGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLEN-VE 81 (323)
Q Consensus 3 ~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~-~d 81 (323)
+|.+|..+++++||+++.+|++|+|||++++++.|++++.|++...+++++|+|+|+|+||.++|+..|+++|.+++ +|
T Consensus 78 ~DALPi~E~t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD 157 (392)
T COG1473 78 MDALPIQEETGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVD 157 (392)
T ss_pred cccCccccccCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCcccccc
Confidence 79999999999999999999999999999999999999999998778999999999999999889999999999999 99
Q ss_pred eeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEE
Q 020658 82 AIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVA 161 (323)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~ 161 (323)
++|++|+.++.|.|.+.++.|....+...++++++|+++|++.|+.++||+..++.++..|+.+.+|..++.....++++
T Consensus 158 ~v~g~H~~p~~~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg 237 (392)
T COG1473 158 AVFGLHPGPGLPVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVG 237 (392)
T ss_pred EEEEecCCCCCCCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEE
Confidence 99999998877889999999988889999999999999999999999999999999999999999998888888899999
Q ss_pred EEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHH
Q 020658 162 MINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVT 241 (323)
Q Consensus 162 ~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 241 (323)
.+++|.+.|+||+.+++..++|.+..+..+++.++|+++++..+..+|+++++.+. ..+|++.+|+.+.+.+++++
T Consensus 238 ~~~aG~a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~~----~~~p~~~Nd~~~~~~~~~~~ 313 (392)
T COG1473 238 KIEAGTAANVIPDSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDYE----RGYPPVVNDPALTDLLAEAA 313 (392)
T ss_pred EecCCCcCCcCCCeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEec----CCCCCccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999886 56788999999999999999
Q ss_pred HHHhCCcccc--cCCCCCcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 020658 242 AEILGEENVK--LAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 318 (323)
Q Consensus 242 ~~~~g~~~~~--~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~~ 318 (323)
++..|.+.+. ....+.|++|+++|.+.+|..++++|..... +.....|+|...++.+.+..+++++..++..++..
T Consensus 314 ~~~~~~~~~~~~~~~~~~gsEDf~~~~~~~Pg~~~~lG~~~~~-~~~~~~H~p~~~~de~~l~~g~~~~~~~~~~~~~~ 391 (392)
T COG1473 314 EEVGGEEVVVVELPPSMAGSEDFGYYLEKVPGAFFFLGTGSAD-GGTYPLHHPKFDFDEAALATGVKLLAALALLYLAK 391 (392)
T ss_pred HHhccccceecccCCCCCccchHHHHHHhCCeeEEEeecCcCC-CCcccccCCcCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 9997644322 2334569999999999999999899977643 11235899999999999999999999999888753
No 4
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.1e-48 Score=355.44 Aligned_cols=300 Identities=20% Similarity=0.263 Sum_probs=245.8
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+++.+.|.++| .++|+|||||+ ||++++++.|+++|++.+..++++|.|+|++|||+|+ |+.+++
T Consensus 66 ~H~DtVp~~~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~ 145 (377)
T PRK08588 66 GHMDVVAAGDVDKWTYDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLT 145 (377)
T ss_pred eeecccCCCCcccCcCCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHH
Confidence 799999997767895544 57899999996 8999999999999999888889999999999999986 999999
Q ss_pred HcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhcc---
Q 020658 73 QEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE--- 149 (323)
Q Consensus 73 ~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~--- 149 (323)
+++.+.++|++++.++. . ..+. ..++|..+++|+++|+++|+|.|+.|.|||..+++++..|+++..+.
T Consensus 146 ~~~~~~~~d~~i~~ep~--~--~~i~----~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~ 217 (377)
T PRK08588 146 EKGYADDLDALIIGEPS--G--HGIV----YAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKH 217 (377)
T ss_pred hcCccCCCCEEEEecCC--C--ceeE----EEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhccc
Confidence 99887778888765432 1 1222 34579999999999999999999999999999999999998764322
Q ss_pred CCCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCccc
Q 020658 150 IDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMN 229 (323)
Q Consensus 150 ~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 229 (323)
......++++++.++||...|+||++|++++|+|+.|.++.+++.++|++++++.+...++++++++... .+++ ..+.
T Consensus 218 ~~~~~~~t~~v~~i~gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~-~~p~-~~~~ 295 (377)
T PRK08588 218 NPYLGGLTHVVTIINGGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQEIINEVNQNGAAQLSLDIYSN-HRPV-ASDK 295 (377)
T ss_pred CccCCCCceeeeEEeCCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEecC-CCCc-CCCC
Confidence 1224467999999999999999999999999999999999999999999999987665667777765421 1222 2234
Q ss_pred CHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccc-eEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 020658 230 DVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPG-SFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIH 308 (323)
Q Consensus 230 ~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~-~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~ 308 (323)
++++++.+++++++++|.++. .....|++|++++....|. ..+.+||+. ...+|++||+++++++.+++++|
T Consensus 296 ~~~l~~~~~~~~~~~~g~~~~--~~~~~g~tD~~~~~~~~~~ip~i~~Gpg~-----~~~~H~~~E~i~~~~l~~~~~~~ 368 (377)
T PRK08588 296 DSKLVQLAKDVAKSYVGQDIP--LSAIPGATDASSFLKKKPDFPVIIFGPGN-----NLTAHQVDEYVEKDMYLKFIDIY 368 (377)
T ss_pred CCHHHHHHHHHHHHhhCCCCc--eecCCCcccHHHHhhhcCCCCEEEECCCC-----CccCCCCCceeEHHHHHHHHHHH
Confidence 678999999999998887653 4668899999999864333 123478763 25699999999999999999999
Q ss_pred HHHHHHHHh
Q 020658 309 AAFAHSYLV 317 (323)
Q Consensus 309 ~~~~~~~~~ 317 (323)
..++.++|+
T Consensus 369 ~~~~~~~~~ 377 (377)
T PRK08588 369 KEIIIQYLK 377 (377)
T ss_pred HHHHHHHhC
Confidence 999998874
No 5
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=2.6e-46 Score=339.64 Aligned_cols=297 Identities=42% Similarity=0.715 Sum_probs=249.0
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCccHHHHHHcCCCCCc
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENV 80 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~ 80 (323)
||+||||+.++..+||.+.+||++||||++++++++++|++.|++.+..++++|.|+|++|||.+.|+.++++++.++++
T Consensus 63 gH~DtVp~~~~~~~pf~~~~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~ 142 (363)
T TIGR01891 63 ADMDALPIQEQTDLPYKSTNPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDV 142 (363)
T ss_pred eccCCCCcccccCCCcccCCCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCc
Confidence 79999999877678888777899999999999999999999999877778899999999999997799999998877778
Q ss_pred ceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEE
Q 020658 81 EAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSV 160 (323)
Q Consensus 81 d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v 160 (323)
|+++++++.+..+.+.+.+..+..++|..+++|+++|+++|++.|+.|.||+..|++++..|+++..+........++++
T Consensus 143 d~~i~~e~~~~~~~~~~~~~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i 222 (363)
T TIGR01891 143 DAILGLHPDPSIPAGTVGLRPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTV 222 (363)
T ss_pred CEEEEECCCCCCCCeEEEECCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEE
Confidence 99999988766677766556677888999999999999999999999999999999999999876433222333568999
Q ss_pred EEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHH
Q 020658 161 AMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRV 240 (323)
Q Consensus 161 ~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 240 (323)
+.++||...|+||++|++.+|+|+.|.++.+++.++|++++++.+...+++++++... .+++...++++++.++++
T Consensus 223 ~~i~gG~~~nvvP~~~~~~~diR~~~~~~~e~~~~~i~~~~~~~~~~~~~~ve~~~~~----~~p~~~~~~~l~~~l~~a 298 (363)
T TIGR01891 223 GIIEAGGAPNVIPDKASMSGTVRSLDPEVRDQIIDRIERIVEGAAAMYGAKVELNYDR----GLPAVTNDPALTQILKEV 298 (363)
T ss_pred EEEEcCCCCcEECCeeEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEec----CCCCccCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999887778888887653 234455688999999999
Q ss_pred HHHHhCCcccc-cCCCCCcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCCCCCCch
Q 020658 241 TAEILGEENVK-LAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVL 301 (323)
Q Consensus 241 ~~~~~g~~~~~-~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~ 301 (323)
+++++|..+.. .+..++|++|++++++.+|+++.|+|....+-+.....|++|+-.+.+.+
T Consensus 299 ~~~~~g~~~~~~~~~~~~gg~Da~~~~~~~P~~~~f~~~~~~~~~~~~~~h~~~~~~~~~~~ 360 (363)
T TIGR01891 299 ARHVVGPENVAEDPEVTMGSEDFAYYSQKVPGAFFFLGIGNEGTGLSHPLHHPRFDIDEEAL 360 (363)
T ss_pred HHHhcCccceeccCCCCccccCHHHHHHhCCeeEEEEecCCCCCCCCCCCCCCCCcCChHHh
Confidence 99987854321 23568999999999999999988888764210123578999888776544
No 6
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=1.1e-46 Score=348.89 Aligned_cols=299 Identities=20% Similarity=0.209 Sum_probs=242.2
Q ss_pred CCCCccccccCCCCC---ccc-CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWE---HKS-KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~---~~~-~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+.+.+.|+ |.+ +++|++||||+ ||+++++|.|+++|++++.+++++|.|+|++|||+|+ |+.+++
T Consensus 100 ~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~~ 179 (422)
T PRK06915 100 GHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIFQSVIEEESGGAGTLAAI 179 (422)
T ss_pred eeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEecccccCCcchHHHH
Confidence 799999998877894 554 57999999996 7999999999999999888889999999999999886 888888
Q ss_pred HcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhc----
Q 020658 73 QEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR---- 148 (323)
Q Consensus 73 ~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~---- 148 (323)
+++. +.|+++..+ |++.. ...+++|..+++|+++|+++|+|.|+.|.||+..+++++..|+++..+
T Consensus 180 ~~~~--~~d~~i~~e-----p~~~~---i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~~~~~~~~~l~~l~~~~~~~ 249 (422)
T PRK06915 180 LRGY--KADGAIIPE-----PTNMK---FFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIEKSMFVIDHLRKLEEKRNDR 249 (422)
T ss_pred hcCc--CCCEEEECC-----CCCcc---ceeecccEEEEEEEEEeeccccCCCCcCcCHHHHHHHHHHHHHHHHHHhccc
Confidence 8764 468888643 33321 224568999999999999999999999999999999999999877431
Q ss_pred cCCCC-----CCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHc----CCeEEEEeecc
Q 020658 149 EIDPL-----DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVH----RCSAEVDFSGR 219 (323)
Q Consensus 149 ~~~~~-----~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~----g~~~~~~~~~~ 219 (323)
...+. .+.+++++.|+||...|+||++|++.+|+|+.|.++.+++.++|++.+++.+... +..+++++...
T Consensus 250 ~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~~l~~~~~~~~~~~~~~~~v~~~~~ 329 (422)
T PRK06915 250 ITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFENWIAELNDVDEWFVEHPVEVEWFGA 329 (422)
T ss_pred cCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHhccChhhhcCCceEEeecc
Confidence 11111 1358999999999999999999999999999999999999999999998865431 23344443211
Q ss_pred CCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh--hccceEEEecccCCCCCCCCCCCCCCCCCC
Q 020658 220 EHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD--EIPGSFLLLGMLNDSVGSLYPLHSPYFTID 297 (323)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~ 297 (323)
...+ .+++.++++++.+++++++++|.++. ...+++++|+++|.+ ++|+++ +||+. ...+|++||+++
T Consensus 330 ~~~~-~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~g~tD~~~~~~~~giP~v~--fGpg~-----~~~aH~~dE~v~ 399 (422)
T PRK06915 330 RWVP-GELEENHPLMTTLEHNFVEIEGNKPI--IEASPWGTDGGLLTQIAGVPTIV--FGPGE-----TKVAHYPNEYIE 399 (422)
T ss_pred cCCc-ccCCCCCHHHHHHHHHHHHHhCCCCe--eceeeeeccHHHHhccCCCCEEE--ECCCC-----ccccCCCCceeE
Confidence 1122 24556889999999999998888764 456789999999998 499964 67653 257999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhcc
Q 020658 298 EHVLPIGAVIHAAFAHSYLVNS 319 (323)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~ 319 (323)
++++.+++++|+.++.++|+.+
T Consensus 400 ~~~l~~~~~~~~~ll~~~~~~~ 421 (422)
T PRK06915 400 VDKMIAAAKIIALTLLDWCEVK 421 (422)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999998754
No 7
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=2.2e-46 Score=347.51 Aligned_cols=297 Identities=14% Similarity=0.161 Sum_probs=237.6
Q ss_pred CCCCccccccCCCC---Cccc-CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc--cHHHH
Q 020658 1 MPNGSASLQELVEW---EHKS-KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w---~~~~-~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~ 71 (323)
||+||||+++ .| ||.+ ++||+|||||+ ||+++++|+|+++|++.+.+++++|.|+|++|||+|+ |..++
T Consensus 91 gH~DvVp~~~--~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~l 168 (427)
T PRK13013 91 SHHDVVEVGH--GWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEESGGFGGVAYL 168 (427)
T ss_pred eccccCCCCC--CCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCChhHHHHH
Confidence 7999999964 56 5655 67899999884 8999999999999999888889999999999999874 78888
Q ss_pred HHcCCCC--CcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhc-
Q 020658 72 IQEGVLE--NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR- 148 (323)
Q Consensus 72 ~~~~~~~--~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~- 148 (323)
++++.+. ++|+++..++.. ...+. ..++|..+++|+++|+++|+|.|+.|.|||..|+++|..|++...+
T Consensus 169 ~~~~~~~~~~~d~~i~~ep~~---~~~i~----~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~~l~~~~~~~ 241 (427)
T PRK13013 169 AEQGRFSPDRVQHVIIPEPLN---KDRIC----LGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAEIEERLFPL 241 (427)
T ss_pred HhcCCccccCCCEEEEecCCC---CCceE----EeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHHHHHHHhhhh
Confidence 8887765 568888654321 11222 3467999999999999999999999999999999999999765311
Q ss_pred ----cC-CC-----CCCeeEEEEEEEcCCcc----------ccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHc
Q 020658 149 ----EI-DP-----LDSQVVSVAMINGGSSY----------NMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVH 208 (323)
Q Consensus 149 ----~~-~~-----~~~~~~~v~~i~gg~~~----------n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~ 208 (323)
.. .+ ....+++++.|+||... |+||++|++++|+|+.|.++.+++.++|++++++.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~~i~~~~~~~ 321 (427)
T PRK13013 242 LATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITALLERLKRAR 321 (427)
T ss_pred hhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHhhC
Confidence 00 01 13578999999999766 999999999999999999999999999999999876533
Q ss_pred -CCeEEEEeeccCCCCCCC--cccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhh--ccceEEEecccCCCC
Q 020658 209 -RCSAEVDFSGREHPTLPP--TMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE--IPGSFLLLGMLNDSV 283 (323)
Q Consensus 209 -g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~G~~~~~~ 283 (323)
+++++++... .+++ .+.++++++.+.+++++.+|.++. ...+++++|++++.+. +|.++ .|||+.
T Consensus 322 ~~~~~~~~~~~----~~~p~~~~~~~~lv~~l~~a~~~~~g~~~~--~~~~~g~~D~~~~~~~g~~~~~v-~fGPg~--- 391 (427)
T PRK13013 322 PGFAYEIRDLF----EVLPTMTDRDAPVVRSVAAAIERVLGRQAD--YVVSPGTYDQKHIDRIGKLKNCI-AYGPGI--- 391 (427)
T ss_pred CCceeEEEEcc----cCCcccCCCCCHHHHHHHHHHHHhhCCCCc--eeecCccCCHHHHHhcCCCCCEE-EECCCC---
Confidence 4555554321 2233 344568999999999998898763 4567899999999884 44333 478754
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 020658 284 GSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 318 (323)
Q Consensus 284 ~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~~ 318 (323)
...+|++|||++++++.+++++|+.++.+||+.
T Consensus 392 --~~~aH~~nE~v~i~~l~~~~~~l~~~l~~~~~~ 424 (427)
T PRK13013 392 --LDLAHQPDEWVGIADMVDSAKVMALVLADLLAG 424 (427)
T ss_pred --ccccCCCCceeEHHHHHHHHHHHHHHHHHHhcc
Confidence 257999999999999999999999999999874
No 8
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=2.2e-46 Score=341.74 Aligned_cols=290 Identities=20% Similarity=0.250 Sum_probs=237.1
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+|+||+.+.++|+++| +++|++||||+ |++++++|+|++.|++.+.+++++|.|+|+++||.|+ |+..++
T Consensus 71 ~H~DtVp~~~~~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~ 150 (375)
T TIGR01910 71 GHYDVVPAGDLELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLL 150 (375)
T ss_pred cccccccCCChhhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHH
Confidence 799999998666785544 57899999996 8999999999999999888889999999999999886 999999
Q ss_pred HcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccC--
Q 020658 73 QEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI-- 150 (323)
Q Consensus 73 ~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~-- 150 (323)
+++.+.++|++++.++.. .+.+. ..++|..+++|+++|+++|+|.|+.|.||+..|+++|..|.++.....
T Consensus 151 ~~~~~~~~d~~i~~~~~~---~~~v~----~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~ 223 (375)
T TIGR01910 151 QRGYFKDADGVLIPEPSG---GDNIV----IGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYAR 223 (375)
T ss_pred HcCCCCCCCEEEECCCCC---CCceE----EEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhc
Confidence 988776678888654321 12332 235699999999999999999999999999999999999987642211
Q ss_pred ----CCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCC
Q 020658 151 ----DPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPP 226 (323)
Q Consensus 151 ----~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (323)
.....++++++.++||...|+||++|++.+|+|+.|.++.++++++|++++++.+...+++++++.... .+....
T Consensus 224 ~~~~~~~~~~t~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 302 (375)
T TIGR01910 224 NSYGFIPGPITFNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIEDVVKALSKSDGWLYENEPVVK-WSGPNE 302 (375)
T ss_pred ccccccCCCccccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhcCcHHhhCCCeee-ecCCcC
Confidence 112357899999999999999999999999999999999999999999999987655666665543221 121234
Q ss_pred cccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHH
Q 020658 227 TMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGA 305 (323)
Q Consensus 227 ~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~ 305 (323)
.+.++++++++++++++.+|.++. +..++|++|++++.+ ++|++. +||+. ...+|++|||++++++.+++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~-----~~~~H~~~E~v~~~~~~~~~ 373 (375)
T TIGR01910 303 TPPDSRLVKALEAIIKKVRGIEPE--VLVSTGGTDARFLRKAGIPSIV--YGPGD-----LETAHQVNEYISIKNLVEST 373 (375)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCe--EeeeccchhHHHHHHcCCcEEE--ECCCC-----ccccCCCCceeEHHHHHHHh
Confidence 567888999999999998888764 466889999999998 499865 67753 25799999999999999988
Q ss_pred HH
Q 020658 306 VI 307 (323)
Q Consensus 306 ~~ 307 (323)
++
T Consensus 374 ~~ 375 (375)
T TIGR01910 374 KV 375 (375)
T ss_pred hC
Confidence 64
No 9
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-45 Score=337.36 Aligned_cols=293 Identities=19% Similarity=0.201 Sum_probs=237.9
Q ss_pred CCCCccccccCCCCCccc---CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS---KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQ 73 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~---~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~ 73 (323)
||+||||+.. .||.+ ++||+|||||+ ||+++++|+|+++|++.+.+++++|.|+|++|||+|+ |+..+++
T Consensus 99 gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~ 175 (402)
T PRK07338 99 GHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLINPDEEIGSPASAPLLA 175 (402)
T ss_pred eecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEECCcccCChhhHHHHH
Confidence 7999999953 78876 57899999994 8999999999999998887888999999999999986 8888888
Q ss_pred cCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCC-CCCCCcHHHHHHHHHHHHHHhhhccCCC
Q 020658 74 EGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-PQHCIDPILAVSSSVISLQNIVSREIDP 152 (323)
Q Consensus 74 ~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~-p~~g~nAi~~~~~~l~~l~~~~~~~~~~ 152 (323)
+.. .+.++++.+++ ..+.+.+. ..++|..+++|+++|+++|+|. |+.|.||+..|++++..|+++..+
T Consensus 176 ~~~-~~~~~~i~~ep--~~~~~~v~----~~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~~~~i~~l~~l~~~---- 244 (402)
T PRK07338 176 ELA-RGKHAALTYEP--ALPDGTLA----GARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAAAELALALHALNGQ---- 244 (402)
T ss_pred HHh-ccCcEEEEecC--CCCCCcEE----eecceeEEEEEEEEeEcccCCCCcccCccHHHHHHHHHHHHHhhhcc----
Confidence 743 24577776654 32334432 2346899999999999999996 899999999999999999876322
Q ss_pred CCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHH
Q 020658 153 LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVR 232 (323)
Q Consensus 153 ~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 232 (323)
....+++++.|+||...|+||++|++.+|+|+.|.++.+++.++|++++++.+...+++++++... ..+++...+.+++
T Consensus 245 ~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~ 323 (402)
T PRK07338 245 RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKKLIAQVNQRHGVSLHLHGGF-GRPPKPIDAAQQR 323 (402)
T ss_pred CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHHHHhccccCCCeEEEEEccc-cCCCCCCCcchHH
Confidence 234689999999999999999999999999999999999999999999988655556666554221 1123222334568
Q ss_pred HHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 020658 233 IYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAF 311 (323)
Q Consensus 233 ~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~ 311 (323)
+++.++++.++. |.++. +..++|++|++++.. ++|++. ++||+. ..+|++|||++++++.+++++|+.+
T Consensus 324 l~~~~~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~-~~Gpg~------~~~H~~~E~v~i~~l~~~~~~~~~~ 393 (402)
T PRK07338 324 LFEAVQACGAAL-GLTID--WKDSGGVCDGNNLAAAGLPVVD-TLGVRG------GNIHSEDEFVILDSLVERAQLSALI 393 (402)
T ss_pred HHHHHHHHHHHc-CCCcc--cccCCccchHHHHhhcCCCeEe-ccCCCC------CCCCCccceEehhhHHHHHHHHHHH
Confidence 999999988775 87763 567899999999987 489874 477754 4589999999999999999999999
Q ss_pred HHHHHhc
Q 020658 312 AHSYLVN 318 (323)
Q Consensus 312 ~~~~~~~ 318 (323)
+.+|+..
T Consensus 394 l~~~~~~ 400 (402)
T PRK07338 394 LMRLAQG 400 (402)
T ss_pred HHHHhcC
Confidence 9999764
No 10
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.2e-45 Score=334.35 Aligned_cols=295 Identities=18% Similarity=0.196 Sum_probs=235.0
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc--cHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~ 71 (323)
||+||||+++.+.|.++| .+||++||||+ ||++++++.|++.|++.+..++++|.|+|++|||.++ |++.+
T Consensus 65 ~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~ 144 (375)
T PRK13009 65 GHTDVVPPGDLEAWTSPPFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKV 144 (375)
T ss_pred eecccCCCCCcccCCCCCCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHH
Confidence 799999998767885554 57899999986 8999999999999999887889999999999999863 88888
Q ss_pred HHcCC--CCCcceeeEeccCCCCCcc-EEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhc
Q 020658 72 IQEGV--LENVEAIFGLHLVHKYPTG-VVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR 148 (323)
Q Consensus 72 ~~~~~--~~~~d~~~~~~~~~~~~~g-~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~ 148 (323)
++... ..++|+++..++......+ .+ ...++|..+++|+++|+++|+|.|+.|.||+..+++++..|+....+
T Consensus 145 ~~~~~~~~~~~d~~i~~ep~~~~~~~~~i----~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~ 220 (375)
T PRK13009 145 LEWLKARGEKIDYCIVGEPTSTERLGDVI----KNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWD 220 (375)
T ss_pred HHHHHHcCcCCCEEEEcCCCcccCCCCeE----EEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhcc
Confidence 75311 1246888876643222222 12 23356999999999999999999999999999999999999875322
Q ss_pred cC-CCCCCeeEEEEEEEcCC-ccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCC
Q 020658 149 EI-DPLDSQVVSVAMINGGS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPP 226 (323)
Q Consensus 149 ~~-~~~~~~~~~v~~i~gg~-~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (323)
.. ..+...+++++.|++|. ..|+||++|++.+|+|++|.++.+++.++|++.+++ .++++++++.. ...|.
T Consensus 221 ~~~~~~~~~~~~i~~i~~G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~~~~~----~~~~~~~~~~~---~~~p~ 293 (375)
T PRK13009 221 EGNEFFPPTSLQITNIDAGTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK----HGLDYTLEWTL---SGEPF 293 (375)
T ss_pred CCCccCCCceEEEEEEecCCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHHHHHh----cCCCeEEEEec---CCCcc
Confidence 11 22345689999999886 789999999999999999999999999999999874 36677766532 11122
Q ss_pred cccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHH
Q 020658 227 TMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGA 305 (323)
Q Consensus 227 ~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~ 305 (323)
..+++++++.+++++++.+|.++. +..++|++|++++.+ ++|++. +||+. ..+|++||+++++++.+++
T Consensus 294 ~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~g~tda~~~~~~g~p~v~--~Gp~~------~~~H~~~E~i~~~~l~~~~ 363 (375)
T PRK13009 294 LTPPGKLVDAVVAAIEAVTGITPE--LSTSGGTSDARFIADYGAQVVE--FGPVN------ATIHKVNECVSVADLEKLT 363 (375)
T ss_pred cCCCcHHHHHHHHHHHHHhCCCce--eeccCCCccHHHHHHcCCCeEE--eccCc------ccCCCCCCcEEHHHHHHHH
Confidence 222378999999999998898874 466788999999988 477754 77764 4599999999999999999
Q ss_pred HHHHHHHHHHH
Q 020658 306 VIHAAFAHSYL 316 (323)
Q Consensus 306 ~~~~~~~~~~~ 316 (323)
++|..++.+|+
T Consensus 364 ~~~~~~~~~~~ 374 (375)
T PRK13009 364 RIYERILERLL 374 (375)
T ss_pred HHHHHHHHHHh
Confidence 99999999886
No 11
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=3.2e-45 Score=333.56 Aligned_cols=295 Identities=19% Similarity=0.201 Sum_probs=233.3
Q ss_pred CCCCccccccCCCCC---ccc-CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc--cHHHH
Q 020658 1 MPNGSASLQELVEWE---HKS-KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~---~~~-~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~ 71 (323)
||+||||+++.+.|. |.+ .+||++||||+ ||++++++.|++.|++.+..++++|.|+|++|||.++ |+..+
T Consensus 62 ~H~DtVp~~~~~~W~~~p~~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~ 141 (370)
T TIGR01246 62 GHTDVVPAGPEEQWSSPPFEPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKV 141 (370)
T ss_pred ccccccCCCCccccccCCCCcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHH
Confidence 799999998766785 444 57899999985 7999999999999998887888999999999999863 88887
Q ss_pred HHcCC--CCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhcc
Q 020658 72 IQEGV--LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE 149 (323)
Q Consensus 72 ~~~~~--~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~ 149 (323)
++... ...+|+++..++....+.+.. ...+++|..+++++++|+++|++.|+.+.||+..|++++..|.+.....
T Consensus 142 ~~~~~~~~~~~d~~i~~ep~~~~~~~~~---i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~ 218 (370)
T TIGR01246 142 VETLMARDELIDYCIVGEPSSVKKLGDV---IKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDE 218 (370)
T ss_pred HHHHHhcCCCCCEEEEcCCCCcccCCce---EEEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhcc
Confidence 75311 124788887765332222221 1234579999999999999999999999999999999999997653211
Q ss_pred -CCCCCCeeEEEEEEEcCC-ccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCc
Q 020658 150 -IDPLDSQVVSVAMINGGS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPT 227 (323)
Q Consensus 150 -~~~~~~~~~~v~~i~gg~-~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 227 (323)
.......+++++.++||. ..|+||++|++.+|+|+.|.++.+++.++|++++++ .++++++++.. ...|..
T Consensus 219 ~~~~~~~~t~~i~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~~~~~v~~~~---~~~p~~ 291 (370)
T TIGR01246 219 GNEFFPPTSLQITNIHAGTGANNVIPGELYVQFNLRFSTEVSDEILKQRVEAILDQ----HGLDYDLEWSL---SGEPFL 291 (370)
T ss_pred CCccCCCCceEeeeeecCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCEEEEEec---CCccee
Confidence 112345689999999996 689999999999999999999999999999998864 46677666542 111222
Q ss_pred ccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 020658 228 MNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAV 306 (323)
Q Consensus 228 ~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~ 306 (323)
.+++++++.+++++++.+|.++. +..++|++|++++.. ++|++. +||+. ..+|++||+++++++.++++
T Consensus 292 ~~~~~~~~~~~~a~~~~~g~~~~--~~~~~g~~d~~~~~~~g~p~~~--~Gp~~------~~~H~~~E~i~i~~l~~~~~ 361 (370)
T TIGR01246 292 TNDGKLIDKAREAIEETNGIKPE--LSTGGGTSDGRFIALMGAEVVE--FGPVN------ATIHKVNECVSIEDLEKLSD 361 (370)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCc--eecCCCCchHHHHHHcCCCEEE--ecCCc------ccCCCCCceeEHHHHHHHHH
Confidence 23788999999999998898763 566789999999987 477753 78764 45899999999999999999
Q ss_pred HHHHHHHHH
Q 020658 307 IHAAFAHSY 315 (323)
Q Consensus 307 ~~~~~~~~~ 315 (323)
+|+.++.+|
T Consensus 362 ~~~~~l~~~ 370 (370)
T TIGR01246 362 VYQDLLENL 370 (370)
T ss_pred HHHHHHHhC
Confidence 999999764
No 12
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-45 Score=339.22 Aligned_cols=298 Identities=20% Similarity=0.221 Sum_probs=239.7
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc--cHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~ 71 (323)
||+||||+.+.+.|.++| .++|+|||||+ |++++++++|+++|++.+..++++|.|+|++|||.|+ |+.++
T Consensus 83 ~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~ 162 (400)
T PRK13983 83 SHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYL 162 (400)
T ss_pred eeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHH
Confidence 799999998767786655 46899999994 8999999999999999888899999999999999875 89999
Q ss_pred HHc--CCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHH-hhhc
Q 020658 72 IQE--GVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQN-IVSR 148 (323)
Q Consensus 72 ~~~--~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~-~~~~ 148 (323)
++. +.+.+.|++++.+ .+.|++... ..+++|..+++|+++|+++|+|.|+.|+||+..+++++..|++ +...
T Consensus 163 ~~~~~~~~~~~d~~i~~~--~~~~~~~~i---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~ 237 (400)
T PRK13983 163 LKKHPELFKKDDLILVPD--AGNPDGSFI---EIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEK 237 (400)
T ss_pred HhhcccccCCCCEEEEec--CCCCCCcee---EEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 987 5555678777643 344555421 2345799999999999999999999999999999999999987 3211
Q ss_pred c--CCC---CCCeeEEEEEEEcC-CccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCC
Q 020658 149 E--IDP---LDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHP 222 (323)
Q Consensus 149 ~--~~~---~~~~~~~v~~i~gg-~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~ 222 (323)
. ..+ ....+++++.+.+| ...|+||++|++++|+|+.|+++.++++++|++++++.+...+.+++++.... ..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~~~~~~~~~~~~~v~~~~~~~-~~ 316 (400)
T PRK13983 238 FNAKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKEIADEFEEEYGVKIEVEIVQR-EQ 316 (400)
T ss_pred hcccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHHHHHHhccccCcceeEEEeec-cC
Confidence 1 111 11246677888877 58999999999999999999999999999999999987666666777665321 12
Q ss_pred CCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCch
Q 020658 223 TLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVL 301 (323)
Q Consensus 223 ~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~ 301 (323)
+..+.+.++++++.+.+++++++|.++. +..++|+||++++.. ++|++. +||+. ..+|++||+++++++
T Consensus 317 ~~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~td~~~~~~~gip~v~--~Gp~~------~~~H~~nE~v~i~~l 386 (400)
T PRK13983 317 APPPTPPDSEIVKKLKRAIKEVRGIEPK--VGGIGGGTVAAFLRKKGYPAVV--WSTLD------ETAHQPNEYAKISNL 386 (400)
T ss_pred CccCCCCCcHHHHHHHHHHHHhcCCCce--eeeecCcHHHHHHHHcCCCEEE--eCCcc------ccCCCCCceeeHHHH
Confidence 2334567899999999999998898774 466789999999986 589865 46653 469999999999999
Q ss_pred HHHHHHHHHHHHH
Q 020658 302 PIGAVIHAAFAHS 314 (323)
Q Consensus 302 ~~~~~~~~~~~~~ 314 (323)
.+++++|..++.+
T Consensus 387 ~~~~~~~~~~~~~ 399 (400)
T PRK13983 387 IEDAKVFALLLLE 399 (400)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998864
No 13
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=2.5e-44 Score=331.17 Aligned_cols=297 Identities=19% Similarity=0.281 Sum_probs=237.9
Q ss_pred CCCCccccccCCCCCccc--CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHc
Q 020658 1 MPNGSASLQELVEWEHKS--KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQE 74 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~--~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~ 74 (323)
||+||||+.+ .|.++| .++|++||||+ |++++++|+|++.|++.+.+++++|.|+|+++||.|+ |+..++++
T Consensus 106 ~H~D~Vp~~~--~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~ 183 (410)
T PRK06133 106 AHMDTVYLPG--MLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSRELIAE 183 (410)
T ss_pred eecCccCCCC--ccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHHHHH
Confidence 7999999965 476665 67899999994 8999999999999999887788999999999999886 99999986
Q ss_pred CCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccC-CCCCCCcHHHHHHHHHHHHHHhhhccCCCC
Q 020658 75 GVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPL 153 (323)
Q Consensus 75 ~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss-~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~ 153 (323)
. ..++|++|+.++. .+.+.+.+ .++|..+++|+++|+++||+ .|+.|.||+..+++++..|+++.. ..
T Consensus 184 ~-~~~~d~~i~~ep~--~~~~~v~~----~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~----~~ 252 (410)
T PRK06133 184 L-AAQHDVVFSCEPG--RAKDALTL----ATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGD----PA 252 (410)
T ss_pred H-hccCCEEEEeCCC--CCCCCEEE----eccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccC----CC
Confidence 3 2357899888643 22233432 34699999999999999986 699999999999999999887632 22
Q ss_pred CCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHH
Q 020658 154 DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRI 233 (323)
Q Consensus 154 ~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 233 (323)
...+++++.++||...|+||++|++.+|+|+.|.++.+++.++|++++++ +...++++++++.. ..+++...+.++++
T Consensus 253 ~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 330 (410)
T PRK06133 253 KGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN-KLVPDTEVTLRFER-GRPPLEANAASRAL 330 (410)
T ss_pred CCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-cCCCCeEEEEEecc-ccCCcccCcchHHH
Confidence 34689999999999999999999999999999999999999999999987 33456676665532 11222222345578
Q ss_pred HHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 020658 234 YQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFA 312 (323)
Q Consensus 234 ~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~ 312 (323)
++.+++++++. |.++...+..+++++|++++.. ++|.+++++|+.. ..+|++||+++++++..++++|..++
T Consensus 331 ~~~~~~~~~~~-~~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G~~~------~~aH~~nE~i~i~~~~~~~~~~~~~~ 403 (410)
T PRK06133 331 AEHAQGIYGEL-GRRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFGLVG------FGAHSNDEYIELNSIVPRLYLLTRMI 403 (410)
T ss_pred HHHHHHHHHHc-CCCccccccCCCCCchHHHHHhcCCCceEecccCCC------CCCCCCCcEEEcccHHHHHHHHHHHH
Confidence 88888888775 7654211255889999999998 4888776566643 46999999999999999999999999
Q ss_pred HHHHhcc
Q 020658 313 HSYLVNS 319 (323)
Q Consensus 313 ~~~~~~~ 319 (323)
.++|+++
T Consensus 404 ~~~~~~~ 410 (410)
T PRK06133 404 MELSRDK 410 (410)
T ss_pred HHhhcCC
Confidence 9999863
No 14
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=2.5e-44 Score=330.78 Aligned_cols=302 Identities=19% Similarity=0.211 Sum_probs=233.0
Q ss_pred CCCCccccccCCCC---Cccc-C-CCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc--cHHH
Q 020658 1 MPNGSASLQELVEW---EHKS-K-IDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKD 70 (323)
Q Consensus 1 ~~~D~vP~~~~~~w---~~~~-~-~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~ 70 (323)
||+||||+.+ ..| ||.+ . +||++||||+ |++++++|+|+++|++.+..++++|.|+|++|||.|+ |+++
T Consensus 78 ~H~DvVp~~~-~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~ 156 (400)
T TIGR01880 78 SHTDVVPVFR-EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEK 156 (400)
T ss_pred cccccCCCCc-ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHH
Confidence 7999999976 356 4554 3 5899999997 7999999999999999888889999999999999874 9999
Q ss_pred HHHcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhh---
Q 020658 71 MIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVS--- 147 (323)
Q Consensus 71 ~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~--- 147 (323)
+++++.+...|..++++.+...|.+.. ..+.+++|..+++|+++|+++|+|.|. ..||+..|++++..|.++..
T Consensus 157 ~~~~~~~~~~~~~~~~d~g~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~ 233 (400)
T TIGR01880 157 FAKTDEFKALNLGFALDEGLASPDDVY--RVFYAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQF 233 (400)
T ss_pred HHHhhhccCCceEEEEcCCCccccccc--ceeEEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHH
Confidence 998866656677777653322334322 234567899999999999999999864 46999999999998866421
Q ss_pred ---cc---CCCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCC
Q 020658 148 ---RE---IDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREH 221 (323)
Q Consensus 148 ---~~---~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~ 221 (323)
+. ......++++++.++||...|+||++|++.+|+|+.|.++.+++.++|++++++. ..++++++.... ..
T Consensus 234 ~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~~i~~~--~~~~~~~~~~~~-~~ 310 (400)
T TIGR01880 234 QLLQSNPDLAIGDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDEWCADA--GEGVTYEFSQHS-GK 310 (400)
T ss_pred HHHhcCccccccccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHHHHhcc--CCceEEEEeecC-CC
Confidence 00 1111247999999999999999999999999999999999999999999999862 123444433211 11
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCc
Q 020658 222 PTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHV 300 (323)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~ 300 (323)
++..+.+.++++++.+++++++. +.++. +..+.|+||++++.+ ++|++. |||+.. ....+|++||++++++
T Consensus 311 ~~~~~~~~~~~lv~~l~~a~~~~-~~~~~--~~~~~g~tDa~~~~~~gip~v~--fgp~~~---~~~~aH~~dE~i~i~~ 382 (400)
T TIGR01880 311 PLVTPHDDSNPWWVAFKDAVKEM-GCTFK--PEILPGSTDSRYIRAAGVPALG--FSPMNN---TPVLLHDHNEFLNEAV 382 (400)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHc-CCeec--ceeecCcchHHHHHhCCCCeEE--ECCccC---CcccccCCCCceEHHH
Confidence 11112345788999999999996 65432 456889999999997 589854 676531 1246999999999999
Q ss_pred hHHHHHHHHHHHHHHHh
Q 020658 301 LPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 301 ~~~~~~~~~~~~~~~~~ 317 (323)
+.+++++|.+++.++.+
T Consensus 383 l~~~~~~~~~~l~~~~~ 399 (400)
T TIGR01880 383 FLRGIEIYQTLISALAS 399 (400)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999998864
No 15
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.1e-44 Score=332.32 Aligned_cols=298 Identities=18% Similarity=0.126 Sum_probs=237.5
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+++.+.|+++| +++|+|||||+ ||+++++|.|+++|++++..++++|.|+|+++||.++ |+..++
T Consensus 104 gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~g~~~~~ 183 (427)
T PRK06837 104 GHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARVHFQSVIEEESTGNGALSTL 183 (427)
T ss_pred eecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCHhHHHHH
Confidence 799999998656775444 57899999996 7999999999999999888889999999999999775 888888
Q ss_pred HcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccC--
Q 020658 73 QEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI-- 150 (323)
Q Consensus 73 ~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~-- 150 (323)
.++. ..|+++..+ |.+.. ....++|..+++|+++|+++|+|.|+.|.||+..|++++..|+++.....
T Consensus 184 ~~~~--~~d~~iv~e-----p~~~~---i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~ 253 (427)
T PRK06837 184 QRGY--RADACLIPE-----PTGEK---LVRAQVGVIWFRLRVRGAPVHVREAGTGANAIDAAYHLIQALRELEAEWNAR 253 (427)
T ss_pred hcCc--CCCEEEEcC-----CCCCc---cccccceeEEEEEEEEeeccccCCcccCcCHHHHHHHHHHHHHHHHHHHhhc
Confidence 7764 468877654 22211 12345799999999999999999999999999999999999977632110
Q ss_pred ---C-----CCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHc----CCeEEEEeec
Q 020658 151 ---D-----PLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVH----RCSAEVDFSG 218 (323)
Q Consensus 151 ---~-----~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~----g~~~~~~~~~ 218 (323)
. .....+++++.|+||...|+||++|++.+++|+.|+++++++.++|++++++.+... +...++++..
T Consensus 254 ~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (427)
T PRK06837 254 KASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEACLAAAARDDRFLSNNPPEVVWSG 333 (427)
T ss_pred ccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHHHHHHHHhcChhhhhCCCeEEEEe
Confidence 0 112458999999999999999999999999999999999999999999998754332 2223444321
Q ss_pred cCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh--hccceEEEecccCCCCCCCCCCCCCCCCC
Q 020658 219 REHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD--EIPGSFLLLGMLNDSVGSLYPLHSPYFTI 296 (323)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~v 296 (323)
...++ ..+..++++++.+.+++++.+|.++. +..++|++|++++.. ++|++. +||+. ..+|++||++
T Consensus 334 ~~~~p-~~~~~~~~~~~~~~~a~~~~~g~~~~--~~~~~g~tDa~~~~~~~gip~v~--~Gp~~------~~~H~~nE~i 402 (427)
T PRK06837 334 FLAEG-YVLEPGSEAEAALARAHAAVFGGPLR--SFVTTAYTDTRFYGLYYGIPALC--YGPSG------EGIHGFDERV 402 (427)
T ss_pred cccCC-cCCCCCCHHHHHHHHHHHHHhCCCCe--eeEEeeccchHHHhccCCCCEEE--ECCCC------CccCCCCceE
Confidence 01122 23345678999999999998898763 567899999999984 588764 78764 4599999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhcc
Q 020658 297 DEHVLPIGAVIHAAFAHSYLVNS 319 (323)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~ 319 (323)
+++++.+++++|+.++.++|+.+
T Consensus 403 ~i~~l~~~~~~~~~~l~~~~~~~ 425 (427)
T PRK06837 403 DLESVRKVTKTIALFVAEWCGVE 425 (427)
T ss_pred EHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999998643
No 16
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=8.6e-44 Score=334.56 Aligned_cols=304 Identities=16% Similarity=0.212 Sum_probs=231.1
Q ss_pred CCCCccccccC--CCC---Cccc-CCCCceecCc---chHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHH
Q 020658 1 MPNGSASLQEL--VEW---EHKS-KIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKD 70 (323)
Q Consensus 1 ~~~D~vP~~~~--~~w---~~~~-~~~g~~~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~ 70 (323)
||+||||+.+. ..| ||.+ ++||+||||| |||+++++|.|++.|++.+.+++++|.|+|++|||+|+ |+.+
T Consensus 118 gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~ 197 (486)
T PRK08262 118 AHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARA 197 (486)
T ss_pred CcccccCCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHH
Confidence 79999999753 468 5554 5789999999 69999999999999999888899999999999999986 8888
Q ss_pred HHHcCC--CCCcceee------Eecc--CCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHH
Q 020658 71 MIQEGV--LENVEAIF------GLHL--VHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVI 140 (323)
Q Consensus 71 ~~~~~~--~~~~d~~~------~~~~--~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~ 140 (323)
+++.-. ..+.|+++ ..++ ....|++.+ +.+++|..+++|+++|+++|||.|+. .||+..|+++|.
T Consensus 198 l~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~p~~~i----~~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~ 272 (486)
T PRK08262 198 IAELLKERGVRLAFVLDEGGAITEGVLPGVKKPVALI----GVAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALT 272 (486)
T ss_pred HHHHHHHhcCCEEEEEeCCceecccccCCCCceEEee----EEeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHH
Confidence 776310 01234433 1111 112343333 34567999999999999999999988 999999999999
Q ss_pred HHHHhhh----------------cc----------------------------CCCCCCeeEEEEEEEcCCccccccCce
Q 020658 141 SLQNIVS----------------RE----------------------------IDPLDSQVVSVAMINGGSSYNMIPDSA 176 (323)
Q Consensus 141 ~l~~~~~----------------~~----------------------------~~~~~~~~~~v~~i~gg~~~n~iP~~~ 176 (323)
+|++... +. ......++++++.|+||...|+||++|
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a 352 (486)
T PRK08262 273 RLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRA 352 (486)
T ss_pred HHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCcc
Confidence 9976310 00 001235789999999999999999999
Q ss_pred EEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCC
Q 020658 177 TVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIF 256 (323)
Q Consensus 177 ~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~ 256 (323)
++.+|+|+.|+++.+++.++|++.+++. +++ +++......+..+.+.++++++.+++++++++|.... .+..+
T Consensus 353 ~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~--v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~~~~-~~~~~ 425 (486)
T PRK08262 353 TATVNFRILPGDSVESVLAHVRRAVADD----RVE--IEVLGGNSEPSPVSSTDSAAYKLLAATIREVFPDVVV-APYLV 425 (486)
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHhccC----ceE--EEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCcc-cccee
Confidence 9999999999999999999999998752 344 4433211122334556889999999999998774222 24557
Q ss_pred CcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 020658 257 TGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 257 ~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
.|++|++++....|.++.+ ++...+|++...+|++||+++++++.+++++|..++.++++
T Consensus 426 ~g~tDa~~~~~~~p~~~~~-~~~~~gpg~~~~~Ht~dE~i~i~~l~~~~~i~~~~l~~~~~ 485 (486)
T PRK08262 426 VGATDSRHYSGISDNVYRF-SPLRLSPEDLARFHGTNERISVANYARMIRFYYRLIENAAG 485 (486)
T ss_pred cccccHHHHHHhcCCeEEE-CCccCCcccccCCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 8999999998877765443 33222345556799999999999999999999999998864
No 17
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=4.5e-44 Score=331.96 Aligned_cols=301 Identities=16% Similarity=0.173 Sum_probs=229.2
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||++..++|.++| ++||+|||||+ ||+++++|+|++.|++.+ .++.+|.|+|++|||.|+ |+..++
T Consensus 69 gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l 147 (436)
T PRK06446 69 NHYDVQPVDPLSEWKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFI 147 (436)
T ss_pred ecccCCCCCccccccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHH
Confidence 799999998766786555 67999999995 899999999999998764 578899999999999987 888777
Q ss_pred HcCC-CCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEe--CCCccCCCCCCCcHHHHHHHHHHHHHHhhh--
Q 020658 73 QEGV-LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISG--KGGHAAIPQHCIDPILAVSSSVISLQNIVS-- 147 (323)
Q Consensus 73 ~~~~-~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G--~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~-- 147 (323)
++.. ..++|++++ ++....+.+.-.+ ..+++|..+++++++| +++|||.|+.+.||+..|++++.+|.+...
T Consensus 148 ~~~~~~~~~d~vi~-E~~~~~~~~~~~i--~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~ 224 (436)
T PRK06446 148 EKNKNKLKADSVIM-EGAGLDPKGRPQI--VLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRV 224 (436)
T ss_pred HHHHHHhCCCEEEE-CCCCccCCCCeEE--EEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCE
Confidence 6521 224677764 4332223332111 2346799999999998 999999999999999999999999964310
Q ss_pred --------------------cc-----------C---------------CCCCCeeEEEEEEEcC----CccccccCceE
Q 020658 148 --------------------RE-----------I---------------DPLDSQVVSVAMINGG----SSYNMIPDSAT 177 (323)
Q Consensus 148 --------------------~~-----------~---------------~~~~~~~~~v~~i~gg----~~~n~iP~~~~ 177 (323)
+. . .....+++|++.+++| ...|+||++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~ 304 (436)
T PRK06446 225 LIPGFYDDVRELTEEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAF 304 (436)
T ss_pred EccchhcCCCCCCHHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceE
Confidence 00 0 0112478999999887 36799999999
Q ss_pred EEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCC
Q 020658 178 VAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFT 257 (323)
Q Consensus 178 ~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~ 257 (323)
+.+|+|++|+++.+++.++|++++++. +..+++++... .+++ ..+.++++++++++++++++|.++.. .....
T Consensus 305 ~~~d~R~~p~~~~~~v~~~l~~~~~~~----~~~~~~~~~~~-~~p~-~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~~~ 377 (436)
T PRK06446 305 AKLDFRLVPNQDPYKIFELLKKHLQKV----GFNGEIIVHGF-EYPV-RTSVNSKVVKAMIESAKRVYGTEPVV-IPNSA 377 (436)
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHHHHc----CCCeEEEEcCC-ccee-ecCCCCHHHHHHHHHHHHHhCCCCce-ecCCC
Confidence 999999999999999999999998762 34555555431 1222 23457899999999999998887642 23445
Q ss_pred cCCcHHHHHh--hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 020658 258 GSEDFAFFLD--EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 316 (323)
Q Consensus 258 g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~ 316 (323)
|++|+++|.+ ++|+++..+|++.+. ..+|++||+++++++.+++++|.+++.++.
T Consensus 378 g~~d~~~~~~~~gip~v~~~~g~g~~~----~~~H~~dE~i~i~~l~~~~~~~~~~~~~~~ 434 (436)
T PRK06446 378 GTQPMGLFVYKLGIRDIVSAIGVGGYY----SNAHAPNENIRIDDYYKAIKHTEEFLKLYS 434 (436)
T ss_pred CcchHHHHHHHhCCCcceeecccCCCC----cCCcCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 6678888865 588865445654422 579999999999999999999999998774
No 18
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.9e-44 Score=328.49 Aligned_cols=295 Identities=20% Similarity=0.214 Sum_probs=237.8
Q ss_pred CCCCccccccC--CCCCccc-CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHH
Q 020658 1 MPNGSASLQEL--VEWEHKS-KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQ 73 (323)
Q Consensus 1 ~~~D~vP~~~~--~~w~~~~-~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~ 73 (323)
||+||||+.+. ...||.+ +++|++||||+ |++++++|+|++.|++.+ +++|.|+|+++||+|+ |+.++++
T Consensus 81 ~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~ 157 (394)
T PRK08651 81 GHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVE 157 (394)
T ss_pred eeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHh
Confidence 79999999753 2235555 47899999996 899999999999998765 7999999999999986 9999999
Q ss_pred cCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccC---
Q 020658 74 EGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI--- 150 (323)
Q Consensus 74 ~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~--- 150 (323)
++.+ ++|+++..++... +.+. .+++|..+++|+++|+++|++.|+.|.||+..|++++..|++...+..
T Consensus 158 ~~~~-~~d~~i~~~~~~~---~~i~----~~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~ 229 (394)
T PRK08651 158 EGKV-TPDYVIVGEPSGL---DNIC----IGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKY 229 (394)
T ss_pred ccCC-CCCEEEEecCCCC---CceE----EecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhccc
Confidence 8654 3677776543211 1232 245699999999999999999999999999999999999976432111
Q ss_pred ----CCCCCeeEEEEE--EEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCC
Q 020658 151 ----DPLDSQVVSVAM--INGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTL 224 (323)
Q Consensus 151 ----~~~~~~~~~v~~--i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~ 224 (323)
......+++++. ++||...|+||++|++.+|+|+.|.++.+++.++|++++++.+..++++++++.... .+++
T Consensus 230 ~~~~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~i~~~~~-~~~~ 308 (394)
T PRK08651 230 EYDDERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEALLDEVAPELGIEVEFEITPF-SEAF 308 (394)
T ss_pred cccccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHHHhhccCCCeeEEEecc-cCCc
Confidence 112345778888 999999999999999999999999999999999999999998877887777765421 1221
Q ss_pred CCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhh-ccceEEEecccCCCCCCCCCCCCCCCCCCCCchHH
Q 020658 225 PPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 303 (323)
Q Consensus 225 ~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~ 303 (323)
..+.++++++.+++++++++|.++. +..+.|++|++++... +|+++ +||+. ...+|++||+++++++.+
T Consensus 309 -~~~~~~~l~~~~~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~-----~~~~H~~~E~i~~~~l~~ 378 (394)
T PRK08651 309 -VTDPDSELVKALREAIREVLGVEPK--KTISLGGTDARFFGAKGIPTVV--YGPGE-----LELAHAPDEYVEVKDVEK 378 (394)
T ss_pred -cCCCCCHHHHHHHHHHHHHhCCCCc--eeeecCcccHHHHhhCCCcEEE--ECCCC-----hHhcCCCCceeEHHHHHH
Confidence 2234668999999999998898764 4668899999999985 89864 57654 247999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 020658 304 GAVIHAAFAHSYLV 317 (323)
Q Consensus 304 ~~~~~~~~~~~~~~ 317 (323)
++++|..++.++.+
T Consensus 379 ~~~i~~~~i~~l~~ 392 (394)
T PRK08651 379 AAKVYEEVLKRLAK 392 (394)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999999865
No 19
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=7.9e-44 Score=333.66 Aligned_cols=297 Identities=16% Similarity=0.196 Sum_probs=230.7
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCC-CCc-cHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEE-RGT-GAKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-~g~-G~~~~ 71 (323)
||+||||++++ +|.++| ++||+|||||+ ||+++++|+|+++|++.+..++++|.|+|++||| .|+ |+.++
T Consensus 108 ~H~DtVp~~~~-~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l 186 (472)
T PRK09133 108 AHMDVVEAKRE-DWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWL 186 (472)
T ss_pred eecccCCCChh-cCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHH
Confidence 79999999753 586655 57899999995 8999999999999999888899999999999999 665 89998
Q ss_pred HHcCC-CCCcceeeEeccCC------CCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHH
Q 020658 72 IQEGV-LENVEAIFGLHLVH------KYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQN 144 (323)
Q Consensus 72 ~~~~~-~~~~d~~~~~~~~~------~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~ 144 (323)
+++.. ..+.|+++. +++. ++|+.. ....+++|..+++|+++|+++|||.|+ +.|||..|+++|..|++
T Consensus 187 ~~~~~~~~~~~~~i~-e~~~~~~~~~gept~~---~i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~ 261 (472)
T PRK09133 187 AENHRDLIDAEFALN-EGGGGTLDEDGKPVLL---TVQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAA 261 (472)
T ss_pred HHHHhhccCeEEEEE-CCCccccCCCCCceEE---EeeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhh
Confidence 87632 124577776 5432 223221 223567899999999999999999997 48999999999999875
Q ss_pred hhhc----------------------------------------------cCCCCCCeeEEEEEEEcCCccccccCceEE
Q 020658 145 IVSR----------------------------------------------EIDPLDSQVVSVAMINGGSSYNMIPDSATV 178 (323)
Q Consensus 145 ~~~~----------------------------------------------~~~~~~~~~~~v~~i~gg~~~n~iP~~~~~ 178 (323)
+..+ .......++++++.|+||...|+||++|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~ 341 (472)
T PRK09133 262 YRFPVMLNDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATA 341 (472)
T ss_pred CCCCCccCCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEE
Confidence 3100 000013578999999999999999999999
Q ss_pred EEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHh-CCcccccCCCCC
Q 020658 179 AGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEIL-GEENVKLAPIFT 257 (323)
Q Consensus 179 ~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~-g~~~~~~~~~~~ 257 (323)
.+|+|+.|+++.+++.++|++++++ . .++++.... ..+.++.+.+.++++.+++++++++ |.+. .+..+.
T Consensus 342 ~lDiR~~p~~~~e~v~~~I~~~i~~----~--~v~v~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~g~~~--~~~~~~ 412 (472)
T PRK09133 342 NVNCRIFPGDTIEAVRATLKQVVAD----P--AIKITRIGD-PSPSPASPLRPDIMKAVEKLTAAMWPGVPV--IPSMST 412 (472)
T ss_pred EEEEEeCCchhHHHHHHHHHHHhcC----C--CEEEEEccC-CCCCCCCCCCcHHHHHHHHHHHHHCCCCce--eccccc
Confidence 9999999999999999999998864 2 344443221 1222345667889999999999987 5543 245688
Q ss_pred cCCcHHHHHh-hccceEE--EecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 020658 258 GSEDFAFFLD-EIPGSFL--LLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 258 g~tD~~~~~~-~~p~~~~--~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
|+||++++.. ++|++.+ .+||. ....+|++|||++++++.+++++|..++.++++
T Consensus 413 ggtDa~~~~~~gip~~~~~~i~gp~-----~~~~aH~~dE~v~i~~l~~~~~~l~~~l~~l~~ 470 (472)
T PRK09133 413 GATDGRYLRAAGIPTYGVSGLFGDP-----DDTFAHGLNERIPVASFYEGRDFLYELVKDLAG 470 (472)
T ss_pred cccchHHHHhcCCCceeecCcccCc-----ccccCCCCCCceeHHHHHHHHHHHHHHHHHhhc
Confidence 9999999987 4887421 13432 236799999999999999999999999999876
No 20
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=1.4e-43 Score=327.35 Aligned_cols=300 Identities=18% Similarity=0.178 Sum_probs=236.0
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+++.++|+++| ++||+|||||+ ||+++++++|+++|++++..++++|.|+|++|||.|+ |+.+++
T Consensus 84 ~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~~~~ 163 (421)
T PRK08596 84 GHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTLQCC 163 (421)
T ss_pred ccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHHHHH
Confidence 799999998877796555 57899999997 8999999999999999988899999999999999986 999999
Q ss_pred HcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeC----------CCccCCCCCCCcHHHHHHHHHHHH
Q 020658 73 QEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGK----------GGHAAIPQHCIDPILAVSSSVISL 142 (323)
Q Consensus 73 ~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~----------~~Hss~p~~g~nAi~~~~~~l~~l 142 (323)
+++. .+|++++.++.. ... .+++|...++++++|+ .+|++.|+.|.||+..|++++..|
T Consensus 164 ~~~~--~~d~~i~~ep~~-----~~~----~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i~~l 232 (421)
T PRK08596 164 ERGY--DADFAVVVDTSD-----LHM----QGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKIIQSL 232 (421)
T ss_pred hcCC--CCCEEEECCCCC-----Ccc----ccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHHHHH
Confidence 9864 368888765422 111 2345776667777765 479999999999999999999999
Q ss_pred HHhhhc-----cC--CCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHc----CCe
Q 020658 143 QNIVSR-----EI--DPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVH----RCS 211 (323)
Q Consensus 143 ~~~~~~-----~~--~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~----g~~ 211 (323)
+.+... .. ......+++++.|+||...|+||++|++.+|+|+.|+++.+++.++|++++++.+... ...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~ 312 (421)
T PRK08596 233 QELERHWAVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEEYIGKVAAADPWLRENP 312 (421)
T ss_pred HHHHHHHhhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHHHHHHHHhcChhhhhCC
Confidence 876311 11 1123478999999999999999999999999999999999999999999998754311 001
Q ss_pred EEEEee-----ccCCCCCCC--cccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCC
Q 020658 212 AEVDFS-----GREHPTLPP--TMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSV 283 (323)
Q Consensus 212 ~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~ 283 (323)
+++++. ......+++ .+.++++++++.+++++++|.++. +....++||++++.. ++|++. +||+.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~--~~~~~g~tD~~~~~~~gip~v~--~Gpg~--- 385 (421)
T PRK08596 313 PQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKNAI--LDMSTTVTDGGWFAEFGIPAVI--YGPGT--- 385 (421)
T ss_pred ceeEEecccccccccccCCCccCCCCchHHHHHHHHHHHHhCCCCe--eeEEeeecchhhhhhcCCCEEE--ECCCc---
Confidence 122211 000012233 355789999999999999888763 566789999999987 589864 57653
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhccC
Q 020658 284 GSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNSG 320 (323)
Q Consensus 284 ~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~~~~ 320 (323)
...+|++||+++++++.+++++|..++.++|+-++
T Consensus 386 --~~~~H~~~E~v~i~~~~~~~~~~~~~l~~~~~~~~ 420 (421)
T PRK08596 386 --LEEAHSVNEKVEIEQLIEYTKVITAFIYEWCHTKK 420 (421)
T ss_pred --ccccCCCCceEEHHHHHHHHHHHHHHHHHHhCCCC
Confidence 25799999999999999999999999999997654
No 21
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=1.4e-43 Score=325.19 Aligned_cols=295 Identities=18% Similarity=0.162 Sum_probs=230.5
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCc---chHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCC-c-cHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-T-GAKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~-G~~~~ 71 (323)
||+||||+++.+.|.++| .++|++|||| |||+++++|+|++.|++.+..++.++.|+++++||.+ + |+.++
T Consensus 74 ~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~ 153 (395)
T TIGR03526 74 AHIDTVGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYI 153 (395)
T ss_pred eeccccCCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHH
Confidence 799999998877897666 4789999999 6999999999999999988777889999999999953 3 66777
Q ss_pred HHcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhcc-C
Q 020658 72 IQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE-I 150 (323)
Q Consensus 72 ~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~-~ 150 (323)
++++.+ ++|++++.++. . ..+. ..++|..+++|+++|+++|+|.|+.|.|||..|++++..|+++.... .
T Consensus 154 ~~~~~~-~~d~~i~~ep~--~--~~i~----~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~ 224 (395)
T TIGR03526 154 IEEDKI-KPEFVVITEPT--D--MNIY----RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVE 224 (395)
T ss_pred HhccCC-CCCEEEecCCC--C--ceEE----EEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcC
Confidence 776544 46888865431 1 1222 23579999999999999999999999999999999999998764321 1
Q ss_pred CC-CCCeeEEEEEEEcCC-ccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCC------
Q 020658 151 DP-LDSQVVSVAMINGGS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHP------ 222 (323)
Q Consensus 151 ~~-~~~~~~~v~~i~gg~-~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~------ 222 (323)
++ ....+++++.+++|. ..|+||++|++++|+|+.|+++.++++++|+++++.. +..+++++.....+
T Consensus 225 ~~~~~~~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 300 (395)
T TIGR03526 225 DPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAEVEMYEYDRPSYTGLV 300 (395)
T ss_pred CcccCccceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHhc----CCcceEEEeccccccccccc
Confidence 22 234689999999875 8999999999999999999999999999999987642 22333332210001
Q ss_pred -----CCCC--cccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHH-HHHh-hccceEEEecccCCCCCCCCCCCCCC
Q 020658 223 -----TLPP--TMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFA-FFLD-EIPGSFLLLGMLNDSVGSLYPLHSPY 293 (323)
Q Consensus 223 -----~~~~--~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~-~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~d 293 (323)
.+++ ++.++++++++++++++++|.++. .....+++|++ ++.+ ++|++. +||+. ...+|++|
T Consensus 301 ~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~Gpg~-----~~~aH~~d 371 (395)
T TIGR03526 301 YPTECYFPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FGPGD-----EDQAHAPN 371 (395)
T ss_pred cccccccCccccCCCCHHHHHHHHHHHHHhCCCCc--eeeeeeecccceehhhcCCCEEE--ECCcc-----hhhccCCC
Confidence 1232 456789999999999999888764 34567777875 4444 588864 77754 35799999
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHh
Q 020658 294 FTIDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 294 E~v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
||++++++.+++++|..++.++|+
T Consensus 372 E~i~i~~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03526 372 EKTWKEDLVKAAAMYAAIPTVYLQ 395 (395)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999874
No 22
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=1.4e-43 Score=325.15 Aligned_cols=295 Identities=18% Similarity=0.155 Sum_probs=230.1
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCcc--HHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG--AKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G--~~~~ 71 (323)
||+||||+++.++|.++| ++||++||||+ ||+++++++|+++|++.+..++++|.|++++|||.++| ..++
T Consensus 74 ~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~ 153 (395)
T TIGR03320 74 AHIDTVGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYI 153 (395)
T ss_pred ecccccCCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHH
Confidence 799999998877896666 57899999994 99999999999999998877889999999999997654 4566
Q ss_pred HHcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhcc-C
Q 020658 72 IQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE-I 150 (323)
Q Consensus 72 ~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~-~ 150 (323)
+++..+ .+|++++.++.. ..+. ..++|..+++|+++|+++|+|.|+.|.||+..+++++..|+++.... .
T Consensus 154 ~~~~~~-~~d~~iv~ep~~----~~i~----~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~ 224 (395)
T TIGR03320 154 IEEDGI-KPEFVVITEPTD----MNIY----RGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVE 224 (395)
T ss_pred HHhcCC-CCCEEEEcCCCc----cceE----EecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcC
Confidence 665333 468888654311 2222 24579999999999999999999999999999999999998764321 1
Q ss_pred CC-CCCeeEEEEEEEcCC-ccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCC-------
Q 020658 151 DP-LDSQVVSVAMINGGS-SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREH------- 221 (323)
Q Consensus 151 ~~-~~~~~~~v~~i~gg~-~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~------- 221 (323)
++ .+..+++++.+++|. ..|+||++|++.+|+|+.|+++.+++.++|++++... +..+++++.....
T Consensus 225 ~~~~~~~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 300 (395)
T TIGR03320 225 DPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNLPAVQ----GAEAKVEMYNYDRPSYTGLV 300 (395)
T ss_pred CcccCcCceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHHHhhc----CCCceEeeeccCcccccccc
Confidence 22 234688999999875 8999999999999999999999999999999986532 2233333221000
Q ss_pred ----CCCCC--cccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcH-HHHHh-hccceEEEecccCCCCCCCCCCCCCC
Q 020658 222 ----PTLPP--TMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDF-AFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPY 293 (323)
Q Consensus 222 ----~~~~~--~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~-~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~d 293 (323)
..+++ ++.++++++++++++++++|.++. .....+++|. +++.+ ++|++. +||+. ...+|++|
T Consensus 301 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~p~v~--~Gpg~-----~~~aH~~n 371 (395)
T TIGR03320 301 YPTECYFPTWVLPEDHLITKAALETYKRLFGKEPG--VDKWTFSTNGVSIMGRHGIPVIG--FGPGD-----EDQAHAPN 371 (395)
T ss_pred cccccccCccccCCCCHHHHHHHHHHHHHhCCCCc--eeecceecccceehhhcCCCEEE--ECCCc-----hhhccCCC
Confidence 11233 356789999999999999888764 3456777787 45555 588764 77754 36799999
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHh
Q 020658 294 FTIDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 294 E~v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
||++++++.+++++|..++.+||+
T Consensus 372 E~v~i~~l~~~~~~~~~~~~~~~~ 395 (395)
T TIGR03320 372 EKTWKEDLVRAAAMYAAIPTVYLE 395 (395)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999984
No 23
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.5e-43 Score=321.69 Aligned_cols=287 Identities=18% Similarity=0.254 Sum_probs=226.9
Q ss_pred CCCCccccccCCCC---Cccc-CCCCceecCc---chHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEW---EHKS-KIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w---~~~~-~~~g~~~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+.+ ..| ||.+ ++||++|||| |||+++++|+|++.|++. .++++|.|+|++|||.|+ |+++++
T Consensus 78 ~H~Dvvp~~~-~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~ 154 (383)
T PRK05111 78 GHTDTVPFDE-GRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFA 154 (383)
T ss_pred eeeceecCCC-CcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHH
Confidence 7999999965 356 4554 5789999999 499999999999999874 467899999999999886 999999
Q ss_pred HcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhh----c
Q 020658 73 QEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVS----R 148 (323)
Q Consensus 73 ~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~----~ 148 (323)
+++.+. .|+++..+ |++.. +..+++|..+++|+++|+++|+|.|+.|.||+..+++++..|+.+.. +
T Consensus 155 ~~~~~~-~d~~i~~e-----p~~~~---~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~ 225 (383)
T PRK05111 155 EATAIR-PDCAIIGE-----PTSLK---PVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQER 225 (383)
T ss_pred hcCCCC-CCEEEEcC-----CCCCc---eeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhcc
Confidence 986543 47777543 33211 12345799999999999999999999999999999999999976531 1
Q ss_pred cCCC---CCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCC
Q 020658 149 EIDP---LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLP 225 (323)
Q Consensus 149 ~~~~---~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (323)
...+ ...++++++.++||...|+||++|++.+|+|+.|.++.+++.++|++.+++.+..++++++++... ..++
T Consensus 226 ~~~~~~~~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~---~~~~ 302 (383)
T PRK05111 226 YHNPAFTVPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREALAPVSERWPGRITVAPLH---PPIP 302 (383)
T ss_pred CCCccCCCCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeccc---cCCC
Confidence 1111 235789999999999999999999999999999999999999999999998877777777665321 1223
Q ss_pred C--cccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhh-ccceEEEecccCCCCCCCCCCCCCCCCCCCCchH
Q 020658 226 P--TMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLP 302 (323)
Q Consensus 226 ~--~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~ 302 (323)
+ .+.++++++.+++++ |.++ ....+++|+.++... +|++. +|++. ...+|++||+++++++.
T Consensus 303 ~~~~~~~~~l~~~~~~~~----g~~~----~~~~~~~Da~~~~~~g~p~v~--~G~g~-----~~~~H~~~E~v~~~~l~ 367 (383)
T PRK05111 303 GYECPADHQLVRVVEKLL----GHKA----EVVNYCTEAPFIQQLGCPTLV--LGPGS-----IEQAHQPDEYLELSFIK 367 (383)
T ss_pred CcCCCCCCHHHHHHHHHh----CCCC----ceeeeeccHHHHHhcCCCEEE--ECCCc-----hHhCcCCCCcccHHHHH
Confidence 2 345677888776544 5543 234578999998774 78765 66653 24699999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 020658 303 IGAVIHAAFAHSYLV 317 (323)
Q Consensus 303 ~~~~~~~~~~~~~~~ 317 (323)
+++++|..++.+++.
T Consensus 368 ~~~~i~~~~~~~~~~ 382 (383)
T PRK05111 368 PTRELLRQLIHHFCL 382 (383)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999874
No 24
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=3.9e-43 Score=316.79 Aligned_cols=274 Identities=15% Similarity=0.137 Sum_probs=220.3
Q ss_pred CCCCccccccCCCCCccc-CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHcC
Q 020658 1 MPNGSASLQELVEWEHKS-KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEG 75 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~-~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~ 75 (323)
||+||||. | |.+ .++|+|||||+ ||+++++++|+++|++.+ .++.|+|++|||+|+ |++++++++
T Consensus 67 gH~DtVp~-----~-~~~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~ 136 (346)
T PRK00466 67 SHVDTVPG-----Y-IEPKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKG 136 (346)
T ss_pred eccccCCC-----C-CCceeeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcC
Confidence 89999995 2 444 67899999994 899999999999998865 468999999999886 999999986
Q ss_pred CCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCCCC
Q 020658 76 VLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDS 155 (323)
Q Consensus 76 ~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~ 155 (323)
. ++|++++.+ |++... ...+++|..+++|+++|+++|+|.|+ .||+..|++++.+|.+.. .....
T Consensus 137 ~--~~d~~i~~e-----p~~~~~--i~~~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~----~~~~~ 201 (346)
T PRK00466 137 F--NFKHIIVGE-----PSNGTD--IVVEYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQP----ENYDK 201 (346)
T ss_pred C--CCCEEEEcC-----CCCCCc--eEEEeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhcc----ccCCC
Confidence 3 468877654 333211 12346799999999999999999986 499999999999987642 22334
Q ss_pred eeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHH
Q 020658 156 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQ 235 (323)
Q Consensus 156 ~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (323)
.+++++.++||...|+||++|++++|+|+.|+++.+++.++|++.+++ +++++ .. ..++ ...+.++++++
T Consensus 202 ~t~~~~~i~gG~~~NvvP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~~~~--~~-~~~~-~~~~~~~~lv~ 271 (346)
T PRK00466 202 PSIVPTIIRAGESYNVTPAKLYLHFDVRYAINNKRDDLISEIKDKFQE------CGLKI--VD-ETPP-VKVSINNPVVK 271 (346)
T ss_pred CcceeeEEecCCcCcccCCceEEEEEEEeCCCCCHHHHHHHHHHHHhh------CcEee--cc-CCCC-cccCCCCHHHH
Confidence 689999999999999999999999999999999999999999998864 33332 21 1122 23445689999
Q ss_pred HHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 020658 236 HVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 315 (323)
Q Consensus 236 ~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~ 315 (323)
.+.+++++. |.++. +..++|+||++++.+..|.++ .|||+. ...+|++|||++++++.+++++|..++.+|
T Consensus 272 ~l~~a~~~~-g~~~~--~~~~~g~tD~~~~~~~~~~~v-~fGpg~-----~~~aH~~nE~i~i~~l~~~~~~~~~~i~~l 342 (346)
T PRK00466 272 ALMRALLKQ-NIKPR--LVRKAGTSDMNILQKITTSIA-TYGPGN-----SMLEHTNQEKITLDEIYIAVKTYMLAIEEL 342 (346)
T ss_pred HHHHHHHHh-CCCce--EEecCCcCcHHHHHHhCCCEE-EECCCC-----cccccCCCceeeHHHHHHHHHHHHHHHHHH
Confidence 999999986 87763 566789999999998655443 378654 367999999999999999999999999999
Q ss_pred Hhc
Q 020658 316 LVN 318 (323)
Q Consensus 316 ~~~ 318 (323)
+++
T Consensus 343 ~~~ 345 (346)
T PRK00466 343 WQK 345 (346)
T ss_pred Hhc
Confidence 875
No 25
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=2.7e-43 Score=323.58 Aligned_cols=298 Identities=15% Similarity=0.124 Sum_probs=232.8
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCC-c-cHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-T-GAKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-~-G~~~~ 71 (323)
||+||||..+.++|.++| .++|++||||+ |++++++|+|++.|++.+..++++|.|+|++|||.+ + |+.++
T Consensus 76 ~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~ 155 (399)
T PRK13004 76 AHIDTVGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYI 155 (399)
T ss_pred eccCccCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHH
Confidence 799999997766787665 46899999996 799999999999999998888999999999999975 3 67888
Q ss_pred HHcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhc--c
Q 020658 72 IQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR--E 149 (323)
Q Consensus 72 ~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~--~ 149 (323)
+++..+ ++|++++.++.. ..+. ..++|..+++|+++|+++|+|.|+.|.||+..|++++..|+.+... .
T Consensus 156 ~~~~~~-~~d~~i~~e~~~----~~i~----~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~ 226 (399)
T PRK13004 156 IEEDKI-KPDFVVITEPTD----LNIY----RGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKE 226 (399)
T ss_pred HHhcCC-CCCEEEEccCCC----CceE----EecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhcccccc
Confidence 887444 468888765321 1222 2356999999999999999999999999999999999999876432 1
Q ss_pred CCCCCCeeEEEEEEEcC-CccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeec---------c
Q 020658 150 IDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSG---------R 219 (323)
Q Consensus 150 ~~~~~~~~~~v~~i~gg-~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~---------~ 219 (323)
.......+++++.+.+| .+.|+||++|++.+|+|+.|.++.+++.++|+++++. ...+.++++.... .
T Consensus 227 ~~~~~~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~ 304 (399)
T PRK13004 227 DPFLGKGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRALPAV--KKANAKVSMYNYDRPSYTGLVYP 304 (399)
T ss_pred CCcCCCceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHHHhh--ccccceEEEecccCCCccccccc
Confidence 12233467899998876 5899999999999999999999999999999998432 1234444432110 0
Q ss_pred CCCCCCC--cccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh--hccceEEEecccCCCCCCCCCCCCCCCC
Q 020658 220 EHPTLPP--TMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD--EIPGSFLLLGMLNDSVGSLYPLHSPYFT 295 (323)
Q Consensus 220 ~~~~~~~--~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~ 295 (323)
....+|+ .+.++++++.+++++++++|.++. .....+++|++.+.+ ++|++. +||+. ...+|++||+
T Consensus 305 ~~~~~p~~~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~~~td~~~~~~~~Gip~v~--~Gpg~-----~~~aH~~nE~ 375 (399)
T PRK13004 305 TECYFPTWLYPEDHEFVKAAVEAYKGLFGKAPE--VDKWTFSTNGVSIAGRAGIPTIG--FGPGK-----EPLAHAPNEY 375 (399)
T ss_pred ccccccccccCCCCHHHHHHHHHHHHHhCCCCe--ecccccccCCeEEehhcCCCEEE--ECCCc-----ccccCCCCce
Confidence 0011233 345789999999999999888763 355677888877753 588864 67653 2579999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHhc
Q 020658 296 IDEHVLPIGAVIHAAFAHSYLVN 318 (323)
Q Consensus 296 v~~~~~~~~~~~~~~~~~~~~~~ 318 (323)
++++++.+++++|..++.+||++
T Consensus 376 i~i~~l~~~~~~~~~~~~~~~~~ 398 (399)
T PRK13004 376 TWKEQLVKAAAMYAAIPKSLLKK 398 (399)
T ss_pred eEHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999964
No 26
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=5.6e-43 Score=318.39 Aligned_cols=282 Identities=18% Similarity=0.268 Sum_probs=222.3
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCc---chHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||..+ +.|.++| +++|++|||| |||+++++|+|+++|++. .++++|.|+|++|||.|+ |+.+++
T Consensus 65 ~H~Dtvp~~~-~~w~~~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~g~~G~~~~~ 141 (364)
T TIGR01892 65 GHTDVVPYDD-AAWTRDPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTADEEVGCTGAPKMI 141 (364)
T ss_pred cccccccCCC-CcCCCCCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEeccccCCcCHHHHH
Confidence 7999999976 4775544 6789999999 799999999999999975 468899999999999985 999999
Q ss_pred HcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccC--
Q 020658 73 QEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI-- 150 (323)
Q Consensus 73 ~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~-- 150 (323)
+++.+ ++|++++. +|.+... ..+++|..+++|+++|+++|++.|+.|.||+..+++++..|+++.....
T Consensus 142 ~~~~~-~~d~~i~~-----ep~~~~~---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~ 212 (364)
T TIGR01892 142 EAGAG-RPRHAIIG-----EPTRLIP---VRAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLRE 212 (364)
T ss_pred HhcCC-CCCEEEEC-----CCCCcee---EEeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccC
Confidence 98653 46777754 3444322 1245699999999999999999999999999999999999987632111
Q ss_pred ---CC--CCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHH-HcCCeEEEEeeccCCCCC
Q 020658 151 ---DP--LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAA-VHRCSAEVDFSGREHPTL 224 (323)
Q Consensus 151 ---~~--~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~-~~g~~~~~~~~~~~~~~~ 224 (323)
.. ...++++++.++||...|+||++|++.+|+|+.|.++.+++.++|+++++..+. .++++++++.... .+++
T Consensus 213 ~~~~~~~~~~~~~~i~~i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 291 (364)
T TIGR01892 213 DLDEGFTPPYTTLNIGVIQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLETIAQALVRDEPGFEVQIEVVST-DPGV 291 (364)
T ss_pred CCCccCCCCCceEEEeeeecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhhCCCceEEEEEccC-CCCc
Confidence 01 124689999999999999999999999999999999999999999999987653 3566776655321 1222
Q ss_pred CCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHH
Q 020658 225 PPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 303 (323)
Q Consensus 225 ~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~ 303 (323)
..+.++++++.+++++ |.++ ...+++||++++.. ++|++. +||+. ...+|++||+++++++.+
T Consensus 292 -~~~~~~~~v~~~~~~~----~~~~----~~~~~~tD~~~~~~~gip~v~--~Gpg~-----~~~~H~~~E~i~i~~l~~ 355 (364)
T TIGR01892 292 -NTEPDAELVAFLEELS----GNAP----EVVSYGTEAPQFQELGAEAVV--CGPGD-----IRQAHQPDEYVEIEDLVR 355 (364)
T ss_pred -CCCCCCHHHHHHHHHh----CCCC----ceecccccHHHHHhCCCcEEE--ECCCC-----hHhCCCCCceeeHHHHHH
Confidence 2345678888886543 5433 23567899999987 489764 67643 256999999999999999
Q ss_pred HHHHHHHH
Q 020658 304 GAVIHAAF 311 (323)
Q Consensus 304 ~~~~~~~~ 311 (323)
++++|..+
T Consensus 356 ~~~~~~~~ 363 (364)
T TIGR01892 356 CRAVLARL 363 (364)
T ss_pred HHHHHHHh
Confidence 99999876
No 27
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=1e-42 Score=325.00 Aligned_cols=301 Identities=19% Similarity=0.186 Sum_probs=225.4
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+++.+.|.++| +++|+|||||+ ||+++++++|+++|++.+..++++|.|+|++|||.|+ |+..++
T Consensus 86 gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l 165 (456)
T PRK08201 86 GHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPNLDSFV 165 (456)
T ss_pred eccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCccHHHHH
Confidence 799999998766786555 57899999994 8999999999999988777788899999999999986 888888
Q ss_pred HcCC-CCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCC--ccCCCCC-CCcHHHHHHHHHHHHHHhhhc
Q 020658 73 QEGV-LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGG--HAAIPQH-CIDPILAVSSSVISLQNIVSR 148 (323)
Q Consensus 73 ~~~~-~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~--Hss~p~~-g~nAi~~~~~~l~~l~~~~~~ 148 (323)
++.. ..+.|++++.++....+... . ...+++|..+++|+++|+++ |||.|.. +.||+..|+++|.+|++...+
T Consensus 166 ~~~~~~~~~d~~ii~e~~~~~~~~~-~--i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~~~~~~ 242 (456)
T PRK08201 166 EEEKDKLAADVVLISDTTLLGPGKP-A--ICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLHDEHGT 242 (456)
T ss_pred HhhHHhccCCEEEEeCCCcCCCCCE-E--EEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcCCCCCC
Confidence 7531 12458888776433222111 1 23457899999999999998 9998654 479999999999999653110
Q ss_pred c-----------------------------------CCC-------------CCCeeEEEEEEEcCCc----cccccCce
Q 020658 149 E-----------------------------------IDP-------------LDSQVVSVAMINGGSS----YNMIPDSA 176 (323)
Q Consensus 149 ~-----------------------------------~~~-------------~~~~~~~v~~i~gg~~----~n~iP~~~ 176 (323)
. ... ...+|++++.|+||.. .|+||++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~NvVP~~a 322 (456)
T PRK08201 243 VAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTVIPAEA 322 (456)
T ss_pred EecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceEECcce
Confidence 0 000 0135889999988753 79999999
Q ss_pred EEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCC
Q 020658 177 TVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIF 256 (323)
Q Consensus 177 ~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~ 256 (323)
++.+|+|+.|+++.+++.++|++++++.. ..+.++++.... ..++ ...+.++++++++++++++++|.++. .. .
T Consensus 323 ~~~~diR~~p~~~~e~v~~~i~~~l~~~~-~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~l~~a~~~~~g~~~~--~~-~ 396 (456)
T PRK08201 323 HAKITCRLVPDQDPQEILDLIEAHLQAHT-PAGVRVTIRRFD-KGPA-FVAPIDHPAIQAAARAYEAVYGTEAA--FT-R 396 (456)
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEECC-CcCc-eecCCCCHHHHHHHHHHHHHhCCCce--ec-C
Confidence 99999999999999999999999987631 223444443221 1122 23456789999999999999888763 22 3
Q ss_pred CcCC---cHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 020658 257 TGSE---DFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 316 (323)
Q Consensus 257 ~g~t---D~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~ 316 (323)
.+++ |+.+... ++|+++ +||+... .++|++|||++++++.+++++|..++.++.
T Consensus 397 ~gg~~~~~~~~~~~~gip~v~--~GpG~~~----~~~H~~nE~v~i~~l~~~~~~l~~~~~~~~ 454 (456)
T PRK08201 397 MGGSIPVVETFSSQLHIPIVL--MGFGLPS----ENFHAPNEHFHLENFDKGLRTLVEYWHQLA 454 (456)
T ss_pred CCCcHHHHHHHHHHhCCCEEE--ecCCCCC----CCCCCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 3444 5666654 588875 5665322 579999999999999999999999999874
No 28
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=3.8e-42 Score=312.85 Aligned_cols=287 Identities=16% Similarity=0.174 Sum_probs=223.1
Q ss_pred CCCCcccccc-CCCCCcccCCCCceecCc---chHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHcC
Q 020658 1 MPNGSASLQE-LVEWEHKSKIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEG 75 (323)
Q Consensus 1 ~~~D~vP~~~-~~~w~~~~~~~g~~~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~ 75 (323)
||+||||... ++.+||. +++|+||||| |||+++++|+|+++|++.+..++.+|.|+|++|||.|+ |+..+++++
T Consensus 82 gH~DtV~~~~~~~~~p~~-~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~ 160 (376)
T PRK07473 82 GHMDTVHPVGTLEKLPWR-REGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAE 160 (376)
T ss_pred ecCCCCCCCCCccCCCeE-EECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHh
Confidence 7999997543 3334554 7789999999 69999999999999999887778899999999999987 999999874
Q ss_pred CCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccC-CCCCCCcHHHHHHHHHHHHHHhhhccCCCCC
Q 020658 76 VLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREIDPLD 154 (323)
Q Consensus 76 ~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss-~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~ 154 (323)
.. +.|++++.++. ...+.+. .+++|..+++|+++|+++|++ .|+.|+||+..|++++..|+++.. .
T Consensus 161 ~~-~~d~~iv~ep~--~~~~~v~----~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~ 227 (376)
T PRK07473 161 AA-RNKYVLVPEPG--RPDNGVV----TGRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------E 227 (376)
T ss_pred hc-cCCEEEEeCCC--CCCCCEE----EECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------C
Confidence 33 46888877643 2222232 345799999999999999997 699999999999999999987632 1
Q ss_pred CeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHH
Q 020658 155 SQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIY 234 (323)
Q Consensus 155 ~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (323)
..+++++.|+||...|+||++|++.+++|....++.+++.+++.+.++. ..+++++++... ..+++.....+++++
T Consensus 228 ~~~~~vg~i~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 303 (376)
T PRK07473 228 DCTFSVGIVHGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSGT---EDDVTFTVTRGV-TRPVWEPDAGTMALY 303 (376)
T ss_pred CceEeEeeEEcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhCc---CCCeEEEEEccc-cCCCCCCChhHHHHH
Confidence 3588999999999999999999999999998888888777777666542 234444443211 123332222345788
Q ss_pred HHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 020658 235 QHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAH 313 (323)
Q Consensus 235 ~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~ 313 (323)
+.++++.++. |.++. ...++++||++++.. ++|++. ++||+. ..+|++|||++++++.+++++|+.++.
T Consensus 304 ~~~~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~giP~v~-g~Gpg~------~~~H~~dE~v~i~~l~~~~~vl~~~l~ 373 (376)
T PRK07473 304 EKARAIAGQL-GLSLP--HGSAGGGSDGNFTGAMGIPTLD-GLGVRG------ADYHTLNEHIEVDSLAERGRLMAGLLA 373 (376)
T ss_pred HHHHHHHHHc-CCCCc--cccCccccHhhhHHhcCCCEEE-eccCCC------CCCCCCCceEecccHHHHHHHHHHHHH
Confidence 8888876654 87763 467889999999987 589865 467764 458999999999999999999999987
Q ss_pred HH
Q 020658 314 SY 315 (323)
Q Consensus 314 ~~ 315 (323)
++
T Consensus 374 ~~ 375 (376)
T PRK07473 374 TL 375 (376)
T ss_pred hc
Confidence 54
No 29
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.2e-42 Score=318.54 Aligned_cols=287 Identities=18% Similarity=0.259 Sum_probs=223.3
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+.++ .|.++| .+||++||||+ ||+++++++|++.|++. .++++|.|+|++|||.|+ |+.+++
T Consensus 71 ~H~Dtv~~~~~-~W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~ 147 (385)
T PRK07522 71 GHTDVVPVDGQ-AWTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMI 147 (385)
T ss_pred eecccccCCCC-CCCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHH
Confidence 79999999764 675544 46899999995 99999999999999986 468899999999999885 999998
Q ss_pred HcCC--CCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccC
Q 020658 73 QEGV--LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI 150 (323)
Q Consensus 73 ~~~~--~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~ 150 (323)
++.. ..++|+++..+ |.+. .....++|..+++|+++|+++|+|.|+.+.||+..|++++..|+++..+..
T Consensus 148 ~~~~~~~~~~d~~i~~e-----p~~~---~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~ 219 (385)
T PRK07522 148 ARLPERGVKPAGCIVGE-----PTSM---RPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLA 219 (385)
T ss_pred HHhhhcCCCCCEEEEcc-----CCCC---eeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHh
Confidence 7522 12357777533 3321 112345799999999999999999999999999999999999987642211
Q ss_pred C-----C---CCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHH------HHHHcCCeEEEEe
Q 020658 151 D-----P---LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKG------QAAVHRCSAEVDF 216 (323)
Q Consensus 151 ~-----~---~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~------~~~~~g~~~~~~~ 216 (323)
. . ...++++++.++||...|+||++|++.+|+|+.|.++.++++++|++.+++ .+...+++++++.
T Consensus 220 ~~~~~~~~~~~~~~t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~v~~~~ 299 (385)
T PRK07522 220 APGPFDALFDPPYSTLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRAYAEAELLPEMRAVHPEAAIEFEP 299 (385)
T ss_pred hcCCCCcCCCCCcceeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHHHHHhhcchhhhhhcCCCcEEEEe
Confidence 1 1 113689999999999999999999999999999999999999999999987 2344567766654
Q ss_pred eccCCCCCCCc--ccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCC
Q 020658 217 SGREHPTLPPT--MNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPY 293 (323)
Q Consensus 217 ~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~d 293 (323)
.. .++++ +.++++++.+++++ +.++ .....+++|++++.. ++|++. +||+. ...+|++|
T Consensus 300 ~~----~~~~~~~~~~~~~v~~~~~~~----~~~~---~~~~~~~td~~~~~~~gip~v~--~Gpg~-----~~~~H~~~ 361 (385)
T PRK07522 300 LS----AYPGLDTAEDAAAARLVRALT----GDND---LRKVAYGTEAGLFQRAGIPTVV--CGPGS-----IEQAHKPD 361 (385)
T ss_pred cc----CCCCCCCCCCcHHHHHHHHHh----CCCC---cceEeeecchHHhccCCCCEEE--ECCCC-----hhhCCCCC
Confidence 32 23444 33577888887654 4333 233567899999987 488854 67643 25799999
Q ss_pred CCCCCCchHHHHHHHHHHHHHHH
Q 020658 294 FTIDEHVLPIGAVIHAAFAHSYL 316 (323)
Q Consensus 294 E~v~~~~~~~~~~~~~~~~~~~~ 316 (323)
|+++++++.+++++|..++.++.
T Consensus 362 E~i~i~~l~~~~~~~~~~~~~~~ 384 (385)
T PRK07522 362 EFVELAQLAACEAFLRRLLASLA 384 (385)
T ss_pred ccccHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998764
No 30
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=4.1e-42 Score=310.92 Aligned_cols=277 Identities=17% Similarity=0.175 Sum_probs=209.5
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc--cHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~ 71 (323)
||+||||+.+ .|.++| .+||+|||||+ ||++++++.|++. +.++|.|+|++|||.|+ |++.+
T Consensus 70 gH~DtVp~~~--~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~ 140 (364)
T PRK08737 70 VHLDTVPDSP--HWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAF 140 (364)
T ss_pred eeeCCCCCCC--CCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHH
Confidence 7999999964 575554 57899999995 8999999999863 35799999999999885 78888
Q ss_pred HHcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCC-CCCCcHHHHHHHHHHHHHHhhhcc-
Q 020658 72 IQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIP-QHCIDPILAVSSSVISLQNIVSRE- 149 (323)
Q Consensus 72 ~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p-~~g~nAi~~~~~~l~~l~~~~~~~- 149 (323)
++.+. +.|++++.+ |++.. ...+++|..+++|+++|+++|+|.| +.|+|||..|+++|.++.+.....
T Consensus 141 ~~~~~--~~~~~iv~E-----pt~~~---~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~ 210 (364)
T PRK08737 141 LARGI--PYEAVLVAE-----PTMSE---AVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLA 210 (364)
T ss_pred HHhCC--CCCEEEEcC-----CCCce---eEEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhh
Confidence 88764 468888654 33221 1245679999999999999999998 589999999999998875442111
Q ss_pred ---CCCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCC
Q 020658 150 ---IDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPP 226 (323)
Q Consensus 150 ---~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (323)
.......+++++.|+||.+.|+||++|++.+|+|+.|+++.++++++|+++++. ...++++.... +.+++
T Consensus 211 ~~~~~~~~~~t~~vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~~----~~~~~~~~~~~---~~~~~ 283 (364)
T PRK08737 211 HARFGGLTGLRFNIGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAEP----AAATFEETFRG---PSLPS 283 (364)
T ss_pred hhccCCCCCCceEEeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHHH----cCCceEEEecc---CCCCC
Confidence 122335689999999999999999999999999999999999999999877764 22333333221 23333
Q ss_pred ccc-CHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHH
Q 020658 227 TMN-DVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIG 304 (323)
Q Consensus 227 ~~~-~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~ 304 (323)
... ..+++..+.+.+.+..|.+. .....++||++++.. ++|+++ +||+. ..++|++|||+++++|.++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~tDa~~~~~~Gip~v~--~GpG~-----~~~aHt~dE~i~i~~l~~~ 353 (364)
T PRK08737 284 GDIARAEERRLAARDVADALDLPI---GNAVDFWTEASLFSAAGYTALV--YGPGD-----IAQAHTADEFVTLDQLQRY 353 (364)
T ss_pred cccCcchHHHHHHHHHHhhhcCCC---CceeccccCHHHHHHcCCCEEE--ECCCC-----hhhccCCCcceeHHHHHHH
Confidence 322 23566555444444447654 234567999999987 589875 67653 3579999999999999999
Q ss_pred HHHHHHHHH
Q 020658 305 AVIHAAFAH 313 (323)
Q Consensus 305 ~~~~~~~~~ 313 (323)
+++|..++.
T Consensus 354 ~~~~~~~~~ 362 (364)
T PRK08737 354 AESVHRIIN 362 (364)
T ss_pred HHHHHHHhc
Confidence 999999875
No 31
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=7.9e-42 Score=308.87 Aligned_cols=280 Identities=17% Similarity=0.099 Sum_probs=224.1
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHcCC
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGV 76 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~ 76 (323)
||+||||.... ++ .+||++||||+ ||+++++|+|++.|++. .++++|.|+|++|||.|+ |+++++++.
T Consensus 62 ~H~D~vp~~~~---~~--~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE~g~~G~~~~~~~~- 133 (347)
T PRK08652 62 VHYDTVPVRAE---FF--VDGVYVYGTGACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEEEGGRGSALFAERY- 133 (347)
T ss_pred ccccccCCCCC---CE--EECCEEEeccchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcccCChhHHHHHHhc-
Confidence 79999998541 11 46899999984 89999999999999864 346799999999999886 999998762
Q ss_pred CCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCCCCe
Q 020658 77 LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQ 156 (323)
Q Consensus 77 ~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~ 156 (323)
+.|+++..++.. +.+ ..+++|..+++|+++|+++|++.|+.|.||+..|++++..|+++........ ..
T Consensus 134 --~~d~~i~~ep~~----~~i----~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~-~~ 202 (347)
T PRK08652 134 --RPKMAIVLEPTD----LKV----AIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYF-DP 202 (347)
T ss_pred --CCCEEEEecCCC----Cce----eeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhccc-CC
Confidence 347877765421 222 2346799999999999999999999999999999999999987643221111 13
Q ss_pred eEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHH
Q 020658 157 VVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQH 236 (323)
Q Consensus 157 ~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
+++++.++||...|+||++|++.+|+|++|.++.+++.++|++++++ .++++++... .+++ +.+.++++++.
T Consensus 203 ~~~~~~i~gg~~~nviP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~----~~v~~~~~~~---~~~~-~~~~~~~lv~~ 274 (347)
T PRK08652 203 HIGIQEIIGGSPEYSIPALCRLRLDARIPPEVEVEDVLDEIDPILDE----YTVKYEYTEI---WDGF-ELDEDEEIVQL 274 (347)
T ss_pred CCcceeeecCCCCCccCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh----cCceEEEecc---CCcc-cCCCCCHHHHH
Confidence 56777899999999999999999999999999999999999999864 3455444321 1232 34568899999
Q ss_pred HHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 020658 237 VRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 315 (323)
Q Consensus 237 ~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~ 315 (323)
+++++++. |.++. +..+.|+||++++.+ ++|++. |||+. ...+|++|||++++++.+++++|.+++.++
T Consensus 275 l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~gip~v~--~Gpg~-----~~~~H~~nE~i~i~~l~~~~~~l~~~~~~~ 344 (347)
T PRK08652 275 LEKAMKEV-GLEPE--FTVMRSWTDAINFRYNGTKTVV--WGPGE-----LDLCHTKFERIDVREVEKAKEFLKALNEIL 344 (347)
T ss_pred HHHHHHHh-CCCCC--cCcCCccchhHHHHHCCCCEEE--ECCCc-----hhhcCCCCceeeHHHHHHHHHHHHHHHHHH
Confidence 99999998 88763 566789999999987 588864 67653 257999999999999999999999999988
Q ss_pred Hh
Q 020658 316 LV 317 (323)
Q Consensus 316 ~~ 317 (323)
++
T Consensus 345 ~~ 346 (347)
T PRK08652 345 LE 346 (347)
T ss_pred hc
Confidence 75
No 32
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=6.5e-42 Score=319.07 Aligned_cols=291 Identities=14% Similarity=0.097 Sum_probs=218.5
Q ss_pred CCCCccccccCCCCC---ccc-CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWE---HKS-KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~---~~~-~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+++ .|. |.+ ++||+|||||+ ||++++++.|+++|++.+.+++++|.|+|++|||+|+ |+.+++
T Consensus 85 gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~ 162 (466)
T TIGR01886 85 GHMDVVPAGE--GWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDMDYYF 162 (466)
T ss_pred eecccCCCCC--CCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccHHHHH
Confidence 7999999974 475 444 67899999995 8999999999999999999999999999999999986 999999
Q ss_pred HcCCCCCcceeeEeccCC----CCCccEEEee---------------------------------c-------------C
Q 020658 73 QEGVLENVEAIFGLHLVH----KYPTGVVASR---------------------------------P-------------G 102 (323)
Q Consensus 73 ~~~~~~~~d~~~~~~~~~----~~~~g~~~~~---------------------------------~-------------g 102 (323)
+++. .+|++|..+.+. +++ |...+. . .
T Consensus 163 ~~~~--~~d~~~~~d~~~~~~~ge~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~~~~ 239 (466)
T TIGR01886 163 KHEE--TPDFGFSPDAEFPIINGEK-GNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAAYESF 239 (466)
T ss_pred hcCc--CCCEEEECCCCceeEEEec-ceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHHHHH
Confidence 8754 245554322100 011 000000 0 0
Q ss_pred cceeee---------eEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHH-------------HHhhhc-----------c
Q 020658 103 DFLAGC---------GSFKAKISGKGGHAAIPQHCIDPILAVSSSVISL-------------QNIVSR-----------E 149 (323)
Q Consensus 103 ~~~~g~---------~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l-------------~~~~~~-----------~ 149 (323)
.+++|. .|++|+++|+++|||.|+.|+|||..|+++|..+ .++... .
T Consensus 240 ~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 319 (466)
T TIGR01886 240 LADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGEKLGIAFH 319 (466)
T ss_pred HhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcccCCCccc
Confidence 123333 2799999999999999999999999999988873 221100 0
Q ss_pred CCCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCccc
Q 020658 150 IDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMN 229 (323)
Q Consensus 150 ~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 229 (323)
......+++|++.|+||.. | ++|++.+|+|++|+++.+++.++|++.++. ..+ +++......++ ..+.
T Consensus 320 ~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-----~~~--v~~~~~~~~P~-~~~~ 387 (466)
T TIGR01886 320 DELMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-----IVD--VTYNGHFEEPH-YVPG 387 (466)
T ss_pred ccCcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-----ccE--EEEecccCCCc-ccCC
Confidence 1124567999999999965 4 799999999999999999999999998874 123 33321011222 2455
Q ss_pred CHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHH
Q 020658 230 DVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHA 309 (323)
Q Consensus 230 ~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~ 309 (323)
++++++.+.+++++++|.++. +..++|+||+++|...+|..+ +|| |++.++|++|||+++++|.+++++|.
T Consensus 388 ds~lv~~l~~a~~~v~G~~~~--~~~~~ggTDa~~~~~~i~~gv--~gP-----G~~~~aH~~dE~V~i~el~~a~~iy~ 458 (466)
T TIGR01886 388 SDPLVQTLLKVYEKHTGKKGH--EVIIGGGTYGRLLERGVAYGA--MFE-----GGPDVMHQANEFMMLDDLILAAAIYA 458 (466)
T ss_pred CCHHHHHHHHHHHHHhCCCCc--eeeecCccHHHhccccccccc--ccC-----CCCCCccCCCcceEHHHHHHHHHHHH
Confidence 779999999999999887653 456899999999987665433 454 44578999999999999999999999
Q ss_pred HHHHHHHh
Q 020658 310 AFAHSYLV 317 (323)
Q Consensus 310 ~~~~~~~~ 317 (323)
.++.+||+
T Consensus 459 ~~i~~l~~ 466 (466)
T TIGR01886 459 EAIYELAK 466 (466)
T ss_pred HHHHHHhC
Confidence 99999874
No 33
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=1.5e-41 Score=317.56 Aligned_cols=301 Identities=16% Similarity=0.172 Sum_probs=224.8
Q ss_pred CCCCccccccCCCCCccc----CCCC-----ceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-c
Q 020658 1 MPNGSASLQELVEWEHKS----KIDG-----KMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-G 67 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g-----~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G 67 (323)
||+||||+++.++|.++| +++| +|||||+ ||+++++|.|+++|++++..++++|.|+|++|||+|+ |
T Consensus 89 gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g 168 (464)
T PRK09104 89 GHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEESGSPS 168 (464)
T ss_pred ecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECccccCCcc
Confidence 799999998766786655 3443 5999995 8999999999999999877788999999999999986 7
Q ss_pred HHHHHHcC-CCCCcceeeEeccCCCCCc-cEEEeecCcceeeeeEEEEEEEe--CCCccCC-CCCCCcHHHHHHHHHHHH
Q 020658 68 AKDMIQEG-VLENVEAIFGLHLVHKYPT-GVVASRPGDFLAGCGSFKAKISG--KGGHAAI-PQHCIDPILAVSSSVISL 142 (323)
Q Consensus 68 ~~~~~~~~-~~~~~d~~~~~~~~~~~~~-g~~~~~~g~~~~g~~~~~i~~~G--~~~Hss~-p~~g~nAi~~~~~~l~~l 142 (323)
...++++. ...+.|++++.++....+. ..+ ..+++|..+++|+++| +++|||. |+.+.||+..|++++.+|
T Consensus 169 ~~~~l~~~~~~~~~d~~iv~E~~~~~~~~~~i----~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~~l~~l 244 (464)
T PRK09104 169 LVPFLEANAEELKADVALVCDTGMWDRETPAI----TTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTRILAGL 244 (464)
T ss_pred HHHHHHhhHHhcCCCEEEEeCCCCCCCCCeEE----EeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHHHHHhc
Confidence 77776642 2124688887764321111 122 2457899999999999 6899996 688999999999999998
Q ss_pred HHhhhcc------------------------------------CCC------------CCCeeEEEEEEEcCC----ccc
Q 020658 143 QNIVSRE------------------------------------IDP------------LDSQVVSVAMINGGS----SYN 170 (323)
Q Consensus 143 ~~~~~~~------------------------------------~~~------------~~~~~~~v~~i~gg~----~~n 170 (323)
.+...+. ..+ ...++++++.|+||. ..|
T Consensus 245 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~n 324 (464)
T PRK09104 245 HDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYTGEGFKT 324 (464)
T ss_pred cCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCCCCCCcc
Confidence 6531100 000 113688999999985 469
Q ss_pred cccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCccc
Q 020658 171 MIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENV 250 (323)
Q Consensus 171 ~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~ 250 (323)
+||++|++.+|+|++|+++++++.++|++++++.. ..+.++++.... ..+....+.++++++.+.+++++++|.++.
T Consensus 325 vvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~~-~~~~~v~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~ 401 (464)
T PRK09104 325 VIPAEASAKVSFRLVGGQDPAKIREAFRAYVRARL-PADCSVEFHDHG--GSPAIALPYDSPALAAAKAALSDEWGKPAV 401 (464)
T ss_pred EecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEecC--CCCceECCCCCHHHHHHHHHHHHHhCCCce
Confidence 99999999999999999999999999999997521 123344443221 112223466889999999999999888764
Q ss_pred ccCCCCCcCC-cHHHHHh--hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 020658 251 KLAPIFTGSE-DFAFFLD--EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 316 (323)
Q Consensus 251 ~~~~~~~g~t-D~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~ 316 (323)
...++|++ |++.|.+ ++|+++ +|++... ..+|++||+++++++.+++++|..++..++
T Consensus 402 --~~~~~g~~~~~~~~~~~~gip~v~--~g~G~~~----~~aH~~nE~i~i~~l~~~~~~~~~ll~~~~ 462 (464)
T PRK09104 402 --LIGSGGSIPIVGDFKRILGMDSLL--VGFGLDD----DRIHSPNEKYDLESFHKGIRSWARILAALA 462 (464)
T ss_pred --ecCCCCcHHHHHHHHHHhCCCEEE--ecCCCCC----CCCcCCCCCcCHHHHHHHHHHHHHHHHHhh
Confidence 33444554 3566654 488875 4554321 569999999999999999999999999886
No 34
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=307.26 Aligned_cols=303 Identities=21% Similarity=0.239 Sum_probs=227.7
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+++...|.++| .+||+|||||+ ||+++++++|++.|.+.+..++++|.++|++|||+|+ |+..++
T Consensus 82 ~H~DvVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~ 161 (409)
T COG0624 82 GHLDVVPAGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYL 161 (409)
T ss_pred ccccccCCCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHH
Confidence 799999999877885554 56799999996 8999999999999999888899999999999999997 777777
Q ss_pred HcCC---CCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCC--CCCCCcHHHHHHHHHHHHHHhhh
Q 020658 73 QEGV---LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI--PQHCIDPILAVSSSVISLQNIVS 147 (323)
Q Consensus 73 ~~~~---~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~--p~~g~nAi~~~~~~l~~l~~~~~ 147 (323)
+.+. ..++|+++..++......+.... .+++|..+++|+++|+++|+|. |+.+.|++..+...+.++.....
T Consensus 162 ~~~~~~~~~~~d~~i~~E~~~~~~~~~~~~---~~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~ 238 (409)
T COG0624 162 EEGEEALGIRPDYEIVGEPTLESEGGDIIV---VGHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELG 238 (409)
T ss_pred HhcchhhccCCCEEEeCCCCCcccCCCeEE---EcceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhc
Confidence 7643 23568888765411111222221 1568999999999999999998 88999955444444444433222
Q ss_pred ccCCC-CC-CeeEEEEEEEcCC--------ccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEee
Q 020658 148 REIDP-LD-SQVVSVAMINGGS--------SYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFS 217 (323)
Q Consensus 148 ~~~~~-~~-~~~~~v~~i~gg~--------~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~ 217 (323)
+.... .. ..+++++.+.++. ..|+||++|++.+|+|+.|.++.+++.++|++.++..+...+++++++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~ 318 (409)
T COG0624 239 DLAGEGFDGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAPKEGVEYEIEPG 318 (409)
T ss_pred ccccccccCCccccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHHHHHHhccccCceEEeccc
Confidence 11111 11 3556666555554 46999999999999999999999999999999998765434555555431
Q ss_pred ccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhh-ccceEEEecccCCCCCCCCCCCCCCCCC
Q 020658 218 GREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTI 296 (323)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~v 296 (323)
......+.+.++++++.+.+++++.+|.++ .....++++|+.++... +| + ..|||+. ...+|++|||+
T Consensus 319 --~~~~~~~~~~~~~~v~~l~~~~~~~~g~~~--~~~~~G~~~da~~~~~~~~~-~-~~fgp~~-----~~~~H~~~E~v 387 (409)
T COG0624 319 --LGEPPLPVPGDSPLVAALAEAAEELLGLPP--EVSTGGGTHDARFFARLGIP-A-VIFGPGD-----IGLAHQPNEYV 387 (409)
T ss_pred --cCCccccCCCchHHHHHHHHHHHHhhCCCc--eecCCCCcchHHHHHhcCCe-e-EEECCCC-----cccccCCCcee
Confidence 113334567788999999999999888774 24555577999999986 57 3 3477755 36899999999
Q ss_pred CCCchHHHHHHHHHHHHHHHh
Q 020658 297 DEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~ 317 (323)
+++++.+++++|+.++.+|++
T Consensus 388 ~i~~l~~~~~~~~~~l~~l~~ 408 (409)
T COG0624 388 ELEDLVKGAKVLARLLYELAE 408 (409)
T ss_pred eHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999975
No 35
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=311.68 Aligned_cols=302 Identities=15% Similarity=0.127 Sum_probs=225.3
Q ss_pred CCCCccccccCCCCC-----ccc-CCCCceecCcc---hHHHHHHHHHHHHHHhc-ccCCCCeEEEEEecCCCCCc-cHH
Q 020658 1 MPNGSASLQELVEWE-----HKS-KIDGKMHACGH---DAHVAMLLGAAKILQEM-RETLKGTVVLIFQPAEERGT-GAK 69 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~-----~~~-~~~g~~~g~G~---kg~~a~~l~a~~~l~~~-~~~~~~~i~~~~~~~EE~g~-G~~ 69 (323)
||+||||.+. +.|. |.+ ++||++||||+ ||+++++|+|+++|++. +.++.++|.|+|++|||+|+ |+.
T Consensus 92 gH~DvVp~~~-~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~dEE~g~~G~~ 170 (469)
T PRK07079 92 GHGDVVRGYD-EQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMGEEIGSPGLA 170 (469)
T ss_pred cccCCCCCCh-HHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCCccHH
Confidence 8999999865 3564 444 68899999995 89999999999998764 47788999999999999987 999
Q ss_pred HHHHcCC-CCCcceeeEeccCCCCCcc-EEEeecCcceeeeeEEEEEEEeC--CCccCCCCCC--CcHHHHHHHHHHHHH
Q 020658 70 DMIQEGV-LENVEAIFGLHLVHKYPTG-VVASRPGDFLAGCGSFKAKISGK--GGHAAIPQHC--IDPILAVSSSVISLQ 143 (323)
Q Consensus 70 ~~~~~~~-~~~~d~~~~~~~~~~~~~g-~~~~~~g~~~~g~~~~~i~~~G~--~~Hss~p~~g--~nAi~~~~~~l~~l~ 143 (323)
+++++.. ..+.|++|+.++....+.. .+ ..+++|..+++|+++|+ +.||+. +.| .||+..++++|.++.
T Consensus 171 ~l~~~~~~~~~~d~~iv~e~~~~~~~~~~i----~~g~kG~~~~~v~v~G~~~~~hs~~-~~g~~~nai~~l~~ai~~l~ 245 (469)
T PRK07079 171 EVCRQHREALAADVLIASDGPRLSAERPTL----FLGSRGAVNFRLRVNLRDGAHHSGN-WGGLLRNPGTVLAHAIASLV 245 (469)
T ss_pred HHHHHhHHhcCCCEEEEeCCCccCCCCeEE----EEecceEEEEEEEEeeCCCCCCCCc-cccccCCHHHHHHHHHHHhC
Confidence 9998742 1246888876542211111 22 24578999999999997 456664 444 699999999999985
Q ss_pred Hhhhcc------------------------C--------------------CCCCCeeEEEEEEEcCC---ccccccCce
Q 020658 144 NIVSRE------------------------I--------------------DPLDSQVVSVAMINGGS---SYNMIPDSA 176 (323)
Q Consensus 144 ~~~~~~------------------------~--------------------~~~~~~~~~v~~i~gg~---~~n~iP~~~ 176 (323)
+...+. . .....+++|++.|+||. ..|+||++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~~NvVP~~a 325 (469)
T PRK07079 246 DARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAPVNAIPGSA 325 (469)
T ss_pred CCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCcceEecCce
Confidence 321000 0 00123578999999994 689999999
Q ss_pred EEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCC
Q 020658 177 TVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRC-SAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPI 255 (323)
Q Consensus 177 ~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~ 255 (323)
++++|+|++|+++.+++.++|++++++. +. .+++++... .++ ...+.++++++.+++++++++|.++.. ...
T Consensus 326 ~~~vdiR~~P~~~~e~v~~~l~~~i~~~----~~~~v~~~~~~~-~~p-~~~~~~~~~v~~l~~a~~~~~g~~~~~-~~~ 398 (469)
T PRK07079 326 RAVCQLRFVVGTDWENLAPHLRAHLDAH----GFPMVEVTVERG-SPA-TRLDPDDPWVRWALASIARTTGKKPAL-LPN 398 (469)
T ss_pred EEEEEEEcCCCCCHHHHHHHHHHHHHhc----CCCCeEEEEeCC-CCc-eecCCCCHHHHHHHHHHHHHhCCCCce-ecC
Confidence 9999999999999999999999999863 22 345554321 122 124567889999999999998876531 234
Q ss_pred CCcCCcHHHHHh--hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhccCC
Q 020658 256 FTGSEDFAFFLD--EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNSGK 321 (323)
Q Consensus 256 ~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (323)
.++++|.++|.. ++|+++ +|++.+ + ..+|++|||++++++.+++++|..++.+++++.-.
T Consensus 399 ~~g~~d~~~~~~~~giP~v~--~g~~~~--~--~~~H~~dE~v~l~~l~~~~~~~~~~~~~~~~~~~~ 460 (469)
T PRK07079 399 LGGSLPNDVFADILGLPTLW--VPHSYP--A--CSQHAPNEHLLASVAREGLQIMAGLFWDLGEQGPA 460 (469)
T ss_pred CCcchhHHHHHHHhCCCEEE--ecCCCC--C--ccCcCCCCCCCHHHHHHHHHHHHHHHHHHhccCCc
Confidence 567779888875 589874 454432 2 35799999999999999999999999999876543
No 36
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=1.8e-40 Score=301.76 Aligned_cols=276 Identities=18% Similarity=0.150 Sum_probs=207.8
Q ss_pred CCCCccccccC--CCCCcc-----------c-CCCCceecCcc---hHHHHHHHHHHHHHHh--cccCCCCeEEEEEecC
Q 020658 1 MPNGSASLQEL--VEWEHK-----------S-KIDGKMHACGH---DAHVAMLLGAAKILQE--MRETLKGTVVLIFQPA 61 (323)
Q Consensus 1 ~~~D~vP~~~~--~~w~~~-----------~-~~~g~~~g~G~---kg~~a~~l~a~~~l~~--~~~~~~~~i~~~~~~~ 61 (323)
||+||||+.+. ..|.++ + ++||+|||||+ ||+++++|+|+++|++ .+..++++|.|+|++|
T Consensus 59 gH~DtVp~~~~~~~~W~~~p~~~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~d 138 (373)
T TIGR01900 59 GHIDTVPIADNFPPKWLEPGDSLIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDC 138 (373)
T ss_pred CccccccCCCCChhhhccCcccccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEec
Confidence 79999999752 357543 2 56899999996 7999999999999964 3556889999999999
Q ss_pred CCCC---ccHHHHHHcCC-CCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHH
Q 020658 62 EERG---TGAKDMIQEGV-LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSS 137 (323)
Q Consensus 62 EE~g---~G~~~~~~~~~-~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~ 137 (323)
||+| .|+..++++.. +.++|++++.++.. ..+ ...++|..+++|+++|+++|+|.|+.|.|||..|++
T Consensus 139 EE~~~~~~G~~~~~~~~~~~~~~d~~iv~Ept~----~~i----~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~ 210 (373)
T TIGR01900 139 EEVAAEKNGLGHIRDAHPDWLAADFAIIGEPTG----GGI----EAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAAD 210 (373)
T ss_pred ccccCCCCCHHHHHHhCcccccCCEEEEECCCC----Ccc----cccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHH
Confidence 9986 28999888642 23568888765422 122 245679999999999999999999999999999999
Q ss_pred HHHHHHHhhhccC--CC-CCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHH--------HHH
Q 020658 138 SVISLQNIVSREI--DP-LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKG--------QAA 206 (323)
Q Consensus 138 ~l~~l~~~~~~~~--~~-~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~--------~~~ 206 (323)
++..|+++..... .. ....+++++.|+||.+.|+||++|++.+|+|+.|+++.+++.+.|+++++. ..+
T Consensus 211 ~i~~l~~l~~~~~~~~~~~~~~t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~~~~~~~~~~~~~~~~~ 290 (373)
T TIGR01900 211 IINKLAAYEAAEVNIDGLDYREGLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMMGADAGAELGNGEHVAE 290 (373)
T ss_pred HHHHHHHhhcccccccCCcccceEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHHhhhhhhhhhHHHHHHh
Confidence 9999987642211 11 123689999999999999999999999999999999999999999766432 221
Q ss_pred H---cC-CeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCC
Q 020658 207 V---HR-CSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLND 281 (323)
Q Consensus 207 ~---~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~ 281 (323)
. .+ .+++++... ..+....+.+.++++.+.+++++++|.++. ...|+||++++.. ++|++. +||+.
T Consensus 291 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~g~tD~~~~~~~gip~v~--~Gpg~- 361 (373)
T TIGR01900 291 GGEFDGQDGIEIAMED--EAGGALPGLGAPLAQDLIDAVGEEKGRDPL----AKFGWTDVARFSALGIPALN--FGAGD- 361 (373)
T ss_pred hccccccccceEEEcc--cCCCCCCCCCCHHHHHHHHHHHhccCCCcc----cccCCccHHHHHhcCCCEEE--eCCCC-
Confidence 1 11 123333321 011111245778999999999998887652 2678899999886 488875 68754
Q ss_pred CCCCCCCCCCCCCCCC
Q 020658 282 SVGSLYPLHSPYFTID 297 (323)
Q Consensus 282 ~~~~~~~~H~~dE~v~ 297 (323)
..++|++|||+.
T Consensus 362 ----~~~aH~~dE~v~ 373 (373)
T TIGR01900 362 ----PLFAHKHDEQCP 373 (373)
T ss_pred ----hhhccCCCCCCC
Confidence 357999999984
No 37
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=1e-40 Score=309.24 Aligned_cols=297 Identities=16% Similarity=0.167 Sum_probs=217.1
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc--cHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~ 71 (323)
||+||||+.+. .|.++| ++||++||||+ ||+++++|+|+++|++.+..++++|.|+|++|||+|+ |+.++
T Consensus 72 ~H~DtVp~~~~-~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l 150 (426)
T PRK07906 72 GHLDVVPAEAA-DWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWL 150 (426)
T ss_pred cccccCCCCcc-cCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHH
Confidence 79999999654 686555 57899999995 8999999999999999988899999999999999974 89988
Q ss_pred HHcC--CCCCcceeeEeccCCC---CCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhh
Q 020658 72 IQEG--VLENVEAIFGLHLVHK---YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIV 146 (323)
Q Consensus 72 ~~~~--~~~~~d~~~~~~~~~~---~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~ 146 (323)
+++. .+...+.++ .+++.. .+..........+++|..+++|+++|+++|+|.|+. .|||..|+++|..|++..
T Consensus 151 ~~~~~~~~~~~~~ii-~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~ 228 (426)
T PRK07906 151 VDNHPELFEGVTEAI-SEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHR 228 (426)
T ss_pred HHHHHHhccchheEE-ECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCC
Confidence 8753 222233333 232110 111100112245678999999999999999999864 899999999999986431
Q ss_pred hcc--------------------CCCC-------------------CCeeEEEEEEEcCCccccccCceEEEEEEeccCh
Q 020658 147 SRE--------------------IDPL-------------------DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNK 187 (323)
Q Consensus 147 ~~~--------------------~~~~-------------------~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~ 187 (323)
.+. ..+. ..++++++.|+||.+.|+||++|++.+|+|+.|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~ 308 (426)
T PRK07906 229 WPLVLTPTVRAFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPG 308 (426)
T ss_pred CCcccCHHHHHHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCC
Confidence 100 0000 1368999999999999999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhC-CcccccCCCCCcCCcHHHHH
Q 020658 188 KRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILG-EENVKLAPIFTGSEDFAFFL 266 (323)
Q Consensus 188 ~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g-~~~~~~~~~~~g~tD~~~~~ 266 (323)
++ +++.++|++++. .++++++.. ..+++ .++.++++++.++++++++.+ ..+ .+....|+||++++.
T Consensus 309 ~~-~~i~~~i~~~~~-------~~v~~~~~~-~~~~~-~~~~~~~~v~~l~~a~~~~~~~~~~--~~~~~~ggtDa~~~~ 376 (426)
T PRK07906 309 RE-EEFLATVDELLG-------PDVEREWVH-RDPAL-ETPFDGPLVDAMNAALLAEDPGARV--VPYMLSGGTDAKAFS 376 (426)
T ss_pred Cc-HHHHHHHHHHhC-------CCeEEEEec-CCCCC-CCCCCcHHHHHHHHHHHHHCCCCeE--eeeeecccCcHHHHH
Confidence 86 566666666542 234554432 12222 345678999999999998853 222 234567889999999
Q ss_pred hh-ccceEEEecccCCCCC--CCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 020658 267 DE-IPGSFLLLGMLNDSVG--SLYPLHSPYFTIDEHVLPIGAVIHAAFAHS 314 (323)
Q Consensus 267 ~~-~p~~~~~~G~~~~~~~--~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~ 314 (323)
.. +|++. +||.....+ ....+|++||+++++++.+++++|+.++.+
T Consensus 377 ~~g~p~~~--~gp~~~~~~~~~~~~~H~~~E~v~~~~l~~~~~~~~~~l~~ 425 (426)
T PRK07906 377 RLGIRCYG--FAPLRLPPDLDFAALFHGVDERVPVDALRFGVRVLDRFLRT 425 (426)
T ss_pred hcCCceEE--EeccccCccccccccCcCCCCceeHHHHHHHHHHHHHHHHh
Confidence 74 77653 566431001 015799999999999999999999999875
No 38
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=309.44 Aligned_cols=301 Identities=18% Similarity=0.207 Sum_probs=222.7
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+++..+|.++| ++||+|||||+ ||+++++++|+++| +.+++++|.|++++|||+|+ |+.+++
T Consensus 90 gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~g~~~~l 166 (449)
T PRK07907 90 AHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSPSLERLL 166 (449)
T ss_pred cccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCccHHHHH
Confidence 799999997766786555 57999999995 89999999999999 34577899999999999986 899998
Q ss_pred HcCC-CCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEE--eCCCccCCC-CCCCcHHHHHHHHHHHHHHhhhc
Q 020658 73 QEGV-LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKIS--GKGGHAAIP-QHCIDPILAVSSSVISLQNIVSR 148 (323)
Q Consensus 73 ~~~~-~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~--G~~~Hss~p-~~g~nAi~~~~~~l~~l~~~~~~ 148 (323)
++.. ..+.|++++.+++... .+.-.+ ..+++|..+++++++ |+++|||.| ..+.||+..|+++|.+|.+...+
T Consensus 167 ~~~~~~~~~d~~iv~E~~~~~-~~~p~i--~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~l~~~~~~ 243 (449)
T PRK07907 167 AEHPDLLAADVIVIADSGNWS-VGVPAL--TTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLATLHDEDGN 243 (449)
T ss_pred HhchHhhcCCEEEEecCCcCC-CCCeEE--EEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHhhCCCCCC
Confidence 8632 1246888877653221 111111 234679999999998 899999974 56889999999999999754211
Q ss_pred c-------CCC---------------------------------CCCeeEEEEEEEc---CCccccccCceEEEEEEecc
Q 020658 149 E-------IDP---------------------------------LDSQVVSVAMING---GSSYNMIPDSATVAGTFRAF 185 (323)
Q Consensus 149 ~-------~~~---------------------------------~~~~~~~v~~i~g---g~~~n~iP~~~~~~~~~R~~ 185 (323)
. ..+ ...++++++.|++ |.+.|+||++|++++|+|+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~~~diR~~ 323 (449)
T PRK07907 244 VAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARARLSLRVA 323 (449)
T ss_pred EeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEEEEEEEcC
Confidence 0 000 1245788988886 46889999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcH-HH
Q 020658 186 NKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDF-AF 264 (323)
Q Consensus 186 p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~-~~ 264 (323)
|+++.+++.+.|++++++.. ..+.+++++.... .+++ ..+.++++++.+++++++++|.++. ....+|+++. ..
T Consensus 324 p~~~~e~v~~~l~~~l~~~~-~~~~~~~~~~~~~-~~p~-~~~~~~~~~~~l~~a~~~~~g~~~~--~~~~~g~~~~~~~ 398 (449)
T PRK07907 324 PGQDAAEAQDALVAHLEAHA-PWGAHVTVERGDA-GQPF-AADASGPAYDAARAAMREAWGKDPV--DMGMGGSIPFIAE 398 (449)
T ss_pred CCCCHHHHHHHHHHHHHhcC-CCCcEEEEEECCC-cCce-eCCCCCHHHHHHHHHHHHHhCCCce--ecCCCCcHHHHHH
Confidence 99999999999999987631 2245566554321 1222 2356789999999999999998764 3444555442 33
Q ss_pred HHhhccc-eEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 020658 265 FLDEIPG-SFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 316 (323)
Q Consensus 265 ~~~~~p~-~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~ 316 (323)
+.+..+. .+..+||+... .++|++||+++++++.+++++|+.++.+|.
T Consensus 399 ~~~~~~~~~~v~~Gpg~~~----~~aH~~nE~i~i~~l~~~~~~~~~~l~~~~ 447 (449)
T PRK07907 399 LQEAFPQAEILVTGVEDPK----TRAHSPNESVHLGELERAAVAEALLLARLA 447 (449)
T ss_pred HHHhcCCCcEEEeccCCCC----CCCcCCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 4443332 22337776432 579999999999999999999999999883
No 39
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-40 Score=287.00 Aligned_cols=301 Identities=21% Similarity=0.250 Sum_probs=238.2
Q ss_pred CCCCccccccCCCCCccc-----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc--cHHH
Q 020658 1 MPNGSASLQELVEWEHKS-----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKD 70 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~-----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~ 70 (323)
.|+||||+..+ .|+|+| .+||.|||||+ |+.++++|.|++.|+..|.+++++|.+.|++|||+|+ |++.
T Consensus 95 SH~DVVP~f~e-~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~ 173 (420)
T KOG2275|consen 95 SHTDVVPVFRE-KWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKE 173 (420)
T ss_pred ccccccCCCcc-cCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHH
Confidence 49999999886 898888 36799999996 8999999999999999999999999999999999985 8999
Q ss_pred HHHcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhh---
Q 020658 71 MIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVS--- 147 (323)
Q Consensus 71 ~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~--- 147 (323)
+++...+.+....+.++.+...+... +..+++++|.+|++|++.|+++|+|.|.. ..|+.++.++++++.+...
T Consensus 174 fa~~~~~~~l~~~filDEG~~se~d~--~~vfyaEkg~w~~~v~~~G~~GHss~~~~-nTa~~~l~klv~~~~~fr~~q~ 250 (420)
T KOG2275|consen 174 FAKTEEFKKLNLGFILDEGGATENDF--ATVFYAEKGPWWLKVTANGTPGHSSYPPP-NTAIEKLEKLVESLEEFREKQV 250 (420)
T ss_pred HhhhhhhcccceeEEecCCCCCcccc--eeEEEEeeceeEEEEEecCCCCCCCCCCC-ccHHHHHHHHHHHHHHhHHHHH
Confidence 98855666666777776432223222 34578899999999999999999998533 3788888888888876531
Q ss_pred ------ccCCCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHH-HHHHHHHHHHcCCeEEEEeecc-
Q 020658 148 ------REIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERI-EEIIKGQAAVHRCSAEVDFSGR- 219 (323)
Q Consensus 148 ------~~~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i-~~~~~~~~~~~g~~~~~~~~~~- 219 (323)
......+.+|+|++.++||.+.|++|++.++.+|+|+.|..+.+++.+++ ++++++ ++-.++++....
T Consensus 251 ~~l~~~p~~~~~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~~----~~eg~t~~f~~~~ 326 (420)
T KOG2275|consen 251 DLLASGPKLALGDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAEE----AGEGVTLEFSQKV 326 (420)
T ss_pred HHhhcCCceeccceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhhh----cCCceEEeccCcc
Confidence 11222457899999999999999999999999999999999999999999 666654 444444544332
Q ss_pred --CCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhh-ccceEEEecccCCCCCCCCCCCCCCCCC
Q 020658 220 --EHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDE-IPGSFLLLGMLNDSVGSLYPLHSPYFTI 296 (323)
Q Consensus 220 --~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~-~p~~~~~~G~~~~~~~~~~~~H~~dE~v 296 (323)
..++..+...+.|++..+..++++. +.+. .+....|+||.++++.. +|..- |.+..+ .....|.-||++
T Consensus 327 ~~~~~~~t~~~~s~p~w~~~~~a~~~~-~~k~--~~~i~~gstdsr~~rn~gvp~~~-fsp~~n----t~~~~H~hnE~l 398 (420)
T KOG2275|consen 327 ILDYPPVTPTDDSNPFWTAFAGALKDE-GGKG--YPEIGPGSTDSRHIRNEGVPAIG-FSPIIN----TPMLLHDHNEFL 398 (420)
T ss_pred cCCCCCCCCCCCCChHHHHHHHHHHHh-cCcc--ceeecccccccchhhhcCcchhc-cccccc----ccceecchhhhh
Confidence 2233334455788999999999998 5444 36889999999999985 77632 233333 237899999999
Q ss_pred CCCchHHHHHHHHHHHHHHHh
Q 020658 297 DEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~ 317 (323)
..+.+.+++++|..++..+.+
T Consensus 399 ~~~~~l~gi~~~~~~i~~~~~ 419 (420)
T KOG2275|consen 399 NEKVFLRGIEIYYTIIVNLAN 419 (420)
T ss_pred CchhhhhhhhHHHHHHHhhcC
Confidence 999999999999998877643
No 40
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=4.1e-40 Score=303.39 Aligned_cols=267 Identities=16% Similarity=0.168 Sum_probs=210.4
Q ss_pred cCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCccHHHHHHcCCCCCcceeeEeccCCCCCccEEEeecCcce
Q 020658 26 ACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFL 105 (323)
Q Consensus 26 g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~ 105 (323)
|++|||+++++++|+++|++.+..++++|.|+|++|||+|.|+..++.++. +.++.+.++. .+.+.+.+. .
T Consensus 138 g~D~Kgglaa~l~a~~~l~~~~~~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~---~~~g~~~~~----~ 208 (408)
T PRK05469 138 GADDKAGIAEIMTALEYLIAHPEIKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDG---GPLGELEYE----N 208 (408)
T ss_pred cccchHHHHHHHHHHHHHHhCCCCCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecC---CCcceEEec----c
Confidence 366799999999999999988767889999999999998778888865432 3466665543 245554432 3
Q ss_pred eeeeEEEEEEEeCCCccCC-CCCCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcCCccccccCceEEEEEEec
Q 020658 106 AGCGSFKAKISGKGGHAAI-PQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRA 184 (323)
Q Consensus 106 ~g~~~~~i~~~G~~~Hss~-p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~ 184 (323)
+|..+++|+++|+++|++. |+.|.|||..+++++..|++............+++++.++|| |++|++.+++|+
T Consensus 209 ~g~~~~~i~v~Gk~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~ 282 (408)
T PRK05469 209 FNAASAKITIHGVNVHPGTAKGKMVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRD 282 (408)
T ss_pred CceeEEEEEEeeecCCCCCCcccccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEec
Confidence 5788999999999999875 899999999999999988765322111112235677778776 899999999999
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHc-CCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHH
Q 020658 185 FNKKRFNALRERIEEIIKGQAAVH-RCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFA 263 (323)
Q Consensus 185 ~p~~~~~~~~~~i~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~ 263 (323)
.|.++.+++.++|++++++.+..+ ++++++++.......+++..+++++++.+++++++. |.++. ...+.|++|++
T Consensus 283 ~~~e~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-g~~~~--~~~~~ggtD~~ 359 (408)
T PRK05469 283 FDREGFEARKALMQEIAKKVNAKYGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDL-GIEPI--IKPIRGGTDGS 359 (408)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHc-CCCcE--EecCCCcccHH
Confidence 999999999999999999988777 577777654311111234678899999999999985 87764 35678999999
Q ss_pred HHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 020658 264 FFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 318 (323)
Q Consensus 264 ~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~~ 318 (323)
++.. ++|+++ +|++. ..+|++||+++++++.+++++|..++..|+++
T Consensus 360 ~~~~~giP~v~--~gpG~------~~~H~~~E~v~i~~l~~~~~~~~~~~~~~~~~ 407 (408)
T PRK05469 360 QLSFMGLPCPN--IFTGG------HNFHGKFEFVSLESMEKAVEVIVEIAELTAER 407 (408)
T ss_pred HHhhCCCceEE--ECcCc------ccCcCcceeeEHHHHHHHHHHHHHHHHHHhcC
Confidence 9986 599976 45543 35999999999999999999999999998864
No 41
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=4.7e-40 Score=302.64 Aligned_cols=270 Identities=18% Similarity=0.170 Sum_probs=212.0
Q ss_pred CCCceecCc-------chHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHcCCCCCcceeeEeccCCC
Q 020658 20 IDGKMHACG-------HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHK 91 (323)
Q Consensus 20 ~~g~~~g~G-------~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~ 91 (323)
.+|++|||| |||+++++|.|+++|++++ .++++|.|+|+++||.|+ |+++++.++. ..|+++++|..
T Consensus 123 ~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~~-- 197 (404)
T PRK13381 123 GEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHGDIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDCC-- 197 (404)
T ss_pred CCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccccccHHHHHHhcC--CCCEEEEecCC--
Confidence 467899966 4899999999999999874 468899999999999985 9999887643 36777776532
Q ss_pred CCccEEEeecCcceeeeeEEEEEEEeCCCccCC-CCCCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcCCccc
Q 020658 92 YPTGVVASRPGDFLAGCGSFKAKISGKGGHAAI-PQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYN 170 (323)
Q Consensus 92 ~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~-p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg~~~n 170 (323)
++ +.+. ..++|..+++|+++|+++|++. |+.|.|||..|++++.+|+++..+........+++++.++++
T Consensus 198 ~~-~~i~----~~~~G~~~~~v~v~Gk~aHa~~~p~~g~NAI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~---- 268 (404)
T PRK13381 198 EL-GEVV----YENFNAASAEITITGVTAHPMSAKGVLVNPILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN---- 268 (404)
T ss_pred Cc-ceEE----EecCcceEEEEEEEeEecCCCCCcccCcCHHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC----
Confidence 33 3332 2357899999999999999885 888999999999999999776322221222345777777764
Q ss_pred cccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcC-CeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcc
Q 020658 171 MIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHR-CSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEEN 249 (323)
Q Consensus 171 ~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~ 249 (323)
|++|++.+|+|+.|.++.+++.++|++++++.++..+ +++++++..........++.++++++.+++++++. |.++
T Consensus 269 --p~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~-g~~~ 345 (404)
T PRK13381 269 --VNKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPTARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKEL-GIEP 345 (404)
T ss_pred --cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEEEeCCchhhcccccCHHHHHHHHHHHHHc-CCCe
Confidence 8999999999999999999999999999999887776 56766543211111123566899999999999875 8776
Q ss_pred cccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 020658 250 VKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 316 (323)
Q Consensus 250 ~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~ 316 (323)
. ...+.++||+++|.. ++|+++ +||+. ..+|++|||++++++.+++++|..++.++.
T Consensus 346 ~--~~~~~g~tDa~~~~~~giP~v~--~GpG~------~~aH~~dE~v~i~~l~~~~~v~~~~~~~~~ 403 (404)
T PRK13381 346 K--VIPMRGGTDGAALSAKGLPTPN--LFTGA------HNFHSRFEFLPVSSFVKSYEVTITICLLAA 403 (404)
T ss_pred e--eccCCccchHHHHhcCCCCeEE--ECccc------cCCcCcceeEEHHHHHHHHHHHHHHHHHhc
Confidence 3 456789999999986 599987 45543 349999999999999999999999998874
No 42
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.4e-39 Score=299.98 Aligned_cols=286 Identities=15% Similarity=0.139 Sum_probs=226.2
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc------cHH-----
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT------GAK----- 69 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~------G~~----- 69 (323)
||+||||.+.. .++|++++++++|+++|++.+.+++++|.|++++|||.|+ |+.
T Consensus 83 ~H~DtVp~gg~---------------~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~ 147 (414)
T PRK12891 83 SHADSQPTGGR---------------YDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGV 147 (414)
T ss_pred ecccCCCCCcc---------------ccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCC
Confidence 79999998531 3689999999999999999999999999999999999852 554
Q ss_pred -------------------HHHHcCCCC-------CcceeeEeccCCC---CCcc-EEEeecCcceeeeeEEEEEEEeCC
Q 020658 70 -------------------DMIQEGVLE-------NVEAIFGLHLVHK---YPTG-VVASRPGDFLAGCGSFKAKISGKG 119 (323)
Q Consensus 70 -------------------~~~~~~~~~-------~~d~~~~~~~~~~---~~~g-~~~~~~g~~~~g~~~~~i~~~G~~ 119 (323)
++.+.|+.. ..++.+.+|.+.+ ++.+ .+. ...+++|..+++|+++|++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~e~h~e~g~vle~~~~~~~--iv~~~kG~~~~~v~v~Gk~ 225 (414)
T PRK12891 148 YPLEYLLSRRDDTGRTLGEHLARIGYAGAEPVGGYPVHAAYELHIEQGAILERAGKTIG--VVTAGQGQRWYEVTLTGVD 225 (414)
T ss_pred CCHHHHHhccCCCCCCHHHHHHHCCCCcccccccCCCCEEEEEEeCCCHHHHHCCCcEE--EEeeccCcEEEEEEEEeEC
Confidence 334444321 1124444454332 1222 112 2355789999999999999
Q ss_pred CccC-CCC-CCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcC-CccccccCceEEEEEEeccChhHHHHHHHH
Q 020658 120 GHAA-IPQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRER 196 (323)
Q Consensus 120 ~Hss-~p~-~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg-~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~ 196 (323)
+|+| .|+ .+.|||..+++++..|+++..+. ....+++++.|+|| ...|+||++|++.+|+|+.|.++.+++.++
T Consensus 226 aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~~---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~ 302 (414)
T PRK12891 226 AHAGTTPMAFRRDALVGAARMIAFLDALGRRD---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAA 302 (414)
T ss_pred CCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHH
Confidence 9998 576 58999999999999998874321 12468999999997 699999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceEEEe
Q 020658 197 IEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLL 276 (323)
Q Consensus 197 i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~ 276 (323)
|++++++.+..++++++++.. ..+++...++++++.+++++++. |.++. ...+.+++|++++..++|+++. +
T Consensus 303 i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~lv~~l~~a~~~~-G~~~~--~~~~~ggtDa~~~~~giPt~~~-~ 374 (414)
T PRK12891 303 LRAELARIADETGLRADIEQI----FGYAPAPFAPGCIDAVRDAARAL-GLSHM--DIVSGAGHDACFAARGAPTGMI-F 374 (414)
T ss_pred HHHHHHHHHHHhCCEEEEEEE----ecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcchHHHHHHHhhCCEEEE-E
Confidence 999999888777888777654 23456677899999999999764 87663 4568899999998778998654 4
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhcc
Q 020658 277 GMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVNS 319 (323)
Q Consensus 277 G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~~~ 319 (323)
||+. ...+|++||++++++|..++++|+.++.+|.+.-
T Consensus 375 gp~~-----~~~aH~~dE~v~i~~l~~~~~il~~~l~~~~~~~ 412 (414)
T PRK12891 375 VPCV-----DGLSHNEAEAITPEWFAAGADVLLRAVLQSAQEA 412 (414)
T ss_pred EcCC-----CCCCCCccccCCHHHHHHHHHHHHHHHHHHhhhc
Confidence 4433 2468999999999999999999999999998754
No 43
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=2.4e-40 Score=309.31 Aligned_cols=293 Identities=17% Similarity=0.174 Sum_probs=214.9
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+++ .|.++| ++||+|||||+ ||+++++++|++.|++.+..++++|.|+|++|||+|+ |+++++
T Consensus 86 gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~G~~~l~ 163 (466)
T PRK07318 86 GHLDVVPAGD--GWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGWKCMDYYF 163 (466)
T ss_pred EecCCCCCCC--CCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCchhHHHHH
Confidence 7999999964 585555 57899999994 8999999999999999888889999999999999987 999999
Q ss_pred HcCCCCC----cce---eeEeccC-----------------------CCCCccEE------Eee---------------c
Q 020658 73 QEGVLEN----VEA---IFGLHLV-----------------------HKYPTGVV------ASR---------------P 101 (323)
Q Consensus 73 ~~~~~~~----~d~---~~~~~~~-----------------------~~~~~g~~------~~~---------------~ 101 (323)
+...... .|. ++..+++ ++.+.+.+ ... .
T Consensus 164 ~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 243 (466)
T PRK07318 164 EHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAAFEAFLA 243 (466)
T ss_pred HhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHHHHHHHh
Confidence 8742110 111 1111100 01111110 000 0
Q ss_pred Ccceeee-----eEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHH------hh----h--------------ccCCC
Q 020658 102 GDFLAGC-----GSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQN------IV----S--------------REIDP 152 (323)
Q Consensus 102 g~~~~g~-----~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~------~~----~--------------~~~~~ 152 (323)
..+++|. .|++|+++|+++|+|.|+.|.|||..|++++..|+. ++ . .....
T Consensus 244 ~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (466)
T PRK07318 244 ENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIAYEDDV 323 (466)
T ss_pred hcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCCcccCCC
Confidence 0134554 379999999999999999999999999999999864 10 0 00111
Q ss_pred CCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHH
Q 020658 153 LDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVR 232 (323)
Q Consensus 153 ~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 232 (323)
.+..++|++.++||... +|++.+|+|+.|+++.+++.++|++++++ .+ ++++... ..+++ ..+.+++
T Consensus 324 ~g~~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~----~~--~~~~~~~-~~~p~-~~~~d~~ 390 (466)
T PRK07318 324 MGDLTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV----TG--VELSEHE-HQKPH-YVPKDDP 390 (466)
T ss_pred ccCeEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh----cC--eEEEEcc-CCCce-eeCCCCH
Confidence 23568999999998431 79999999999999999999999999764 23 4444321 11221 2456789
Q ss_pred HHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 020658 233 IYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFA 312 (323)
Q Consensus 233 ~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~ 312 (323)
+++.+++++++++|.++. +..++|++|++++...+| +||.. |+...++|++|||++++++.+++++|+.++
T Consensus 391 lv~~l~~a~~~~~g~~~~--~~~~~ggtDa~~~~~~i~-----~Gp~~--pg~~~~aH~~dE~v~i~~l~~~~~v~~~~l 461 (466)
T PRK07318 391 LVKTLLKVYEKQTGLKGE--EQVIGGGTYARLLKRGVA-----FGAMF--PGSEDTMHQANEYIEIDDLIKAAAIYAEAI 461 (466)
T ss_pred HHHHHHHHHHHHhCCCCC--eeEEcchHhHhhCCCeEE-----eCCCC--CCCCCCCcCCCcceeHHHHHHHHHHHHHHH
Confidence 999999999998887763 456789999999976443 45433 344466999999999999999999999999
Q ss_pred HHHHh
Q 020658 313 HSYLV 317 (323)
Q Consensus 313 ~~~~~ 317 (323)
.++++
T Consensus 462 ~~~~~ 466 (466)
T PRK07318 462 YELAK 466 (466)
T ss_pred HHHhC
Confidence 99874
No 44
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=5.9e-40 Score=297.11 Aligned_cols=272 Identities=19% Similarity=0.185 Sum_probs=212.2
Q ss_pred CCCCccccccCCCCCccc-CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc---cHHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS-KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT---GAKDMIQ 73 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~-~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~---G~~~~~~ 73 (323)
||+||||+.+ +|++ .+||+|||||+ |++++++|+|+++|. +++++|.++|+++||+|+ |+..+++
T Consensus 68 ~H~Dtvp~~~----~~~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~ 139 (352)
T PRK13007 68 GHLDTVPVAD----NLPSRREGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAR 139 (352)
T ss_pred ccccccCCCC----CCCcceeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHH
Confidence 7999999965 3444 67899999997 799999999999994 378899999999999863 7888876
Q ss_pred cC-CCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccCC-
Q 020658 74 EG-VLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREID- 151 (323)
Q Consensus 74 ~~-~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~- 151 (323)
.. .+.++|++++.++.. +.+. .+++|..+++|+++|+++|||.|+.+.||+..+++++..|+++..+...
T Consensus 140 ~~~~~~~~d~~i~~ep~~----~~i~----~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~ 211 (352)
T PRK13007 140 EHPEWLAGDFAILLEPTD----GVIE----AGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVV 211 (352)
T ss_pred hcccccCCCEEEEecCCC----CceE----eeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhccccccc
Confidence 53 334578988776421 2232 3356999999999999999999999999999999999999876432211
Q ss_pred --CCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCccc
Q 020658 152 --PLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMN 229 (323)
Q Consensus 152 --~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 229 (323)
.....+++++.++||...|+||++|++.+|+|++|+++.+++.++|++++++. + ++++ .. ..+++. ...
T Consensus 212 ~~~~~~~~~~~~~i~gG~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~----~-~~~~--~~-~~~~~~-~~~ 282 (352)
T PRK13007 212 DGLTYREGLNAVRISGGVAGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGF----A-EVEV--TD-LAPGAR-PGL 282 (352)
T ss_pred CCCCccceeEeEeEecCCcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhccc----c-EEEe--ec-ccCCCC-CCC
Confidence 11135789999999999999999999999999999999999999999988642 1 3333 22 113332 345
Q ss_pred CHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHH
Q 020658 230 DVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIH 308 (323)
Q Consensus 230 ~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~ 308 (323)
++++++.+.+++ |.++ ....|++|++++.. ++|++. +||+. ...+|++||+++++++.+++++|
T Consensus 283 ~~~~~~~~~~~~----g~~~----~~~~g~td~~~~~~~Gip~v~--~Gpg~-----~~~~H~~~E~v~i~~l~~~~~~~ 347 (352)
T PRK13007 283 DHPAAAALVAAV----GGEV----RAKYGWTDVARFSALGIPAVN--FGPGD-----PALAHQRDEHVPVAQITACARIL 347 (352)
T ss_pred CCHHHHHHHHHh----CCCC----ccccccchHHHHHhCCCCEEE--eCCCc-----hhhccCCCCceEHHHHHHHHHHH
Confidence 777888888763 5443 33578899999987 488865 67644 35799999999999999999999
Q ss_pred HHHH
Q 020658 309 AAFA 312 (323)
Q Consensus 309 ~~~~ 312 (323)
..++
T Consensus 348 ~~~~ 351 (352)
T PRK13007 348 RRWL 351 (352)
T ss_pred HHHh
Confidence 9875
No 45
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=6.7e-40 Score=295.85 Aligned_cols=274 Identities=13% Similarity=0.043 Sum_probs=211.3
Q ss_pred CCCCccccccCCCCCcccCCCCceecCc---chHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHcCC
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGV 76 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~ 76 (323)
||+||||.. -||. +++|++|||| |||++++++.|+++| +.+++++|.|++++|||.|+ |...++.++.
T Consensus 66 ~H~DtVp~~----~p~~-~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~ 137 (348)
T PRK04443 66 GHIDTVPGD----IPVR-VEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE 137 (348)
T ss_pred eeccccCCC----CCcE-eeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc
Confidence 799999953 2332 5789999999 489999999999999 35688999999999999986 5555555543
Q ss_pred CCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhh---ccCCCC
Q 020658 77 LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVS---REIDPL 153 (323)
Q Consensus 77 ~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~---~~~~~~ 153 (323)
++|++++.++... +.+ ..+++|..+++|+++|+++|||.| +.||+..|++++..|.++.. ......
T Consensus 138 --~~d~~iv~Ept~~---~~i----~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~ 206 (348)
T PRK04443 138 --RPDAVIIGEPSGW---DGI----TLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVF 206 (348)
T ss_pred --CCCEEEEeCCCCc---cce----eeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccc
Confidence 5788887654221 122 235679999999999999999987 68999999999999987643 111123
Q ss_pred CCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHH
Q 020658 154 DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRI 233 (323)
Q Consensus 154 ~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 233 (323)
...+++++.++ ...|+||++|++.+|+|+.|+++.+++.++|++++. +.++++ .. ..+++ ..+.++++
T Consensus 207 ~~~~~~i~~i~--~~~n~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~------~~~~~~--~~-~~~~~-~~~~~~~~ 274 (348)
T PRK04443 207 DQVTPKLVDFD--SSSDGLTVEAEMTVGLRLPPGLSPEEAREILDALLP------TGTVTF--TG-AVPAY-MVSKRTPL 274 (348)
T ss_pred cccceeeeEEe--cCCCCCCceEEEEEEEccCCCCCHHHHHHHHHHhCC------CcEEEE--ec-CCCce-ecCCCCHH
Confidence 34678888888 367999999999999999999999999999999973 233333 21 11222 23567889
Q ss_pred HHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh--hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 020658 234 YQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD--EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAF 311 (323)
Q Consensus 234 ~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~ 311 (323)
++.++++++++.+ ++. .....|++|++++.+ ++|++. +||+. ...+|++|||++++++.+++++|..+
T Consensus 275 ~~~l~~~~~~~~~-~~~--~~~~~g~tD~~~~~~~~gip~v~--~Gpg~-----~~~~H~~dE~i~i~~l~~~~~~~~~~ 344 (348)
T PRK04443 275 ARAFRVAIREAGG-TPR--LKRKTGTSDMNVVAPAWGCPMVA--YGPGD-----SDLDHTPDEHLPLAEYLRAIAVLTDV 344 (348)
T ss_pred HHHHHHHHHHhcC-Ccc--eeccccCCcHHHHhhhcCCCEEE--ECCCC-----ccccCCCcccccHHHHHHHHHHHHHH
Confidence 9999999999855 432 355779999999975 478764 67654 25689999999999999999999999
Q ss_pred HHHH
Q 020658 312 AHSY 315 (323)
Q Consensus 312 ~~~~ 315 (323)
+.+|
T Consensus 345 ~~~l 348 (348)
T PRK04443 345 LERL 348 (348)
T ss_pred HhhC
Confidence 8764
No 46
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=2.1e-39 Score=294.46 Aligned_cols=281 Identities=19% Similarity=0.190 Sum_probs=225.0
Q ss_pred CCCCccccccCCCCCccc-CCCCceecCcc-------hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHH
Q 020658 1 MPNGSASLQELVEWEHKS-KIDGKMHACGH-------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~-~~~g~~~g~G~-------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~ 71 (323)
||+||||..+ .| .+ .++|++||||+ |++++++|++++.|++.+ .++++|.|+|++|||.|+ |+..+
T Consensus 69 ~H~D~V~~~~--~~--~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~ 143 (361)
T TIGR01883 69 GHMDTVPPGA--GP--EPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLF 143 (361)
T ss_pred eeccccCCCC--CC--CceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHh
Confidence 7999999854 33 34 57789999774 599999999999999875 578899999999999886 99888
Q ss_pred HHcCCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccC-CCCCCCcHHHHHHHHHHHHHHhhhccC
Q 020658 72 IQEGVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAA-IPQHCIDPILAVSSSVISLQNIVSREI 150 (323)
Q Consensus 72 ~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss-~p~~g~nAi~~~~~~l~~l~~~~~~~~ 150 (323)
.+.+. ..++.+.+++ ..+.+.+.. +++|..+++|+++|+++|++ .|+.|+||+..|++++..|... + .
T Consensus 144 ~~~~~--~~~~~~~~~~--~~~~~~i~~----~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~--~-~ 212 (361)
T TIGR01883 144 DESKI--TAAYGYCLDA--PGEVGNIQL----AAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLG--R-I 212 (361)
T ss_pred Chhhc--CcceeEEEeC--CCCcceEEe----cCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhcccc--C-C
Confidence 76532 2456655543 223344432 34689999999999999986 6999999999999999988642 1 1
Q ss_pred CCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccC
Q 020658 151 DPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMND 230 (323)
Q Consensus 151 ~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 230 (323)
....+++++.++||...|+||++|++.+++|..|..+.++++++|++.++..+...++++++++.. ..+++ ..+.+
T Consensus 213 --~~~~~~~i~~i~gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~-~~~~~-~~~~~ 288 (361)
T TIGR01883 213 --DEETTANIGSFSGGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRERFEQAAEKYGATLEEETRL-IYEGF-KIHPQ 288 (361)
T ss_pred --CCccccccceeecCCccCccCCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEEe-ccccc-cCCCC
Confidence 123678999999999999999999999999999999999999999999998887788887776542 11222 23457
Q ss_pred HHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHH
Q 020658 231 VRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHA 309 (323)
Q Consensus 231 ~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~ 309 (323)
+++++.+++++++. |.++. ...++|+||++++.. ++|+++ +||+. ..+|++||+++++++.+++++|.
T Consensus 289 ~~lv~~l~~a~~~~-g~~~~--~~~~~g~tD~~~~~~~giP~v~--~G~g~------~~~Hs~~E~v~i~~~~~~~~~~~ 357 (361)
T TIGR01883 289 HPLMNIFKKAAKKI-GLKTS--EIFSGGGSDANVLNEKGVPTVN--LSAGY------VHAHTEKETISIEQLVKLAELVI 357 (361)
T ss_pred CHHHHHHHHHHHHc-CCCcE--EEecCcccHHHHHhhCCCceEE--ECCCc------ccCcCcceeEEHHHHHHHHHHHH
Confidence 88999999999984 87764 466789999999996 599876 56643 46999999999999999999999
Q ss_pred HHH
Q 020658 310 AFA 312 (323)
Q Consensus 310 ~~~ 312 (323)
.++
T Consensus 358 ~~~ 360 (361)
T TIGR01883 358 ALA 360 (361)
T ss_pred HHh
Confidence 876
No 47
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=6.7e-39 Score=296.01 Aligned_cols=285 Identities=17% Similarity=0.126 Sum_probs=221.8
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCC-----c-cHHHHHHc
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-----T-GAKDMIQE 74 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-----~-G~~~~~~~ 74 (323)
||+||||.+ +| +|| +++++++|.|++.|++++..++++|.|++++|||.+ . |+++++++
T Consensus 81 gH~DtVp~~---g~---------~dg---~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~ 145 (412)
T PRK12892 81 SHLDSQNLG---GR---------YDG---ALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGR 145 (412)
T ss_pred ccccCCCCC---Cc---------ccc---hHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcC
Confidence 799999984 24 344 357999999999999999899999999999999984 2 88888753
Q ss_pred CCC-----------------------CCcceeeEe-----------ccCCC---CCccEEEeecCcceeeeeEEEEEEEe
Q 020658 75 GVL-----------------------ENVEAIFGL-----------HLVHK---YPTGVVASRPGDFLAGCGSFKAKISG 117 (323)
Q Consensus 75 ~~~-----------------------~~~d~~~~~-----------~~~~~---~~~g~~~~~~g~~~~g~~~~~i~~~G 117 (323)
... ...|+++.. |.+.+ ++.+. ......+++|..+++|+++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~-~~~i~~~~kG~~~~~i~v~G 224 (412)
T PRK12892 146 LDPADALAARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGL-PVGVVTGIVGIWQYRITVTG 224 (412)
T ss_pred CCHHHHHhCccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCC-cEEEEEEeccceEEEEEEEE
Confidence 110 001222222 11110 11121 01123567899999999999
Q ss_pred CCCccCC-CC-CCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcC-CccccccCceEEEEEEeccChhHHHHHH
Q 020658 118 KGGHAAI-PQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALR 194 (323)
Q Consensus 118 ~~~Hss~-p~-~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg-~~~n~iP~~~~~~~~~R~~p~~~~~~~~ 194 (323)
+++|+|. |+ .+.|||..+++++..|+++..+.. .+.+++++.|+|| ...|+||++|++.+|+|+.|.++.+++.
T Consensus 225 ~~aHa~~~p~~~g~nAi~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~ 301 (412)
T PRK12892 225 EAGHAGTTPMALRRDAGLAAAEMIAAIDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLV 301 (412)
T ss_pred ECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHH
Confidence 9999985 65 578999999999999987643322 2368999999987 7999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceEE
Q 020658 195 ERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFL 274 (323)
Q Consensus 195 ~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~ 274 (323)
++|+++++..+..+++++++... ..+++...++++++.+++++++ +|.++. +..++|++|+++|.+.+|+++.
T Consensus 302 ~~i~~~~~~~~~~~~~~~e~~~~----~~~~~~~~d~~lv~~~~~a~~~-~g~~~~--~~~~~g~tDa~~~~~~ip~~~~ 374 (412)
T PRK12892 302 ALLEALCREIARRRGCRVSVDRI----AEYAPAPCDAALVDALRAAAEA-AGGPYL--EMPSGAGHDAQNMARIAPSAML 374 (412)
T ss_pred HHHHHHHHHHHHHhCCeEEEEEE----ecCCCcCCCHHHHHHHHHHHHH-cCCCcc--ccCcchHHHHHHHHhHCCEEEE
Confidence 99999999987777888877654 2355666789999999999999 587764 4568899999999988887554
Q ss_pred EecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 020658 275 LLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 275 ~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
+||+. ...+|++||+++++++.+++++|+.++.++++
T Consensus 375 -~gp~~-----~~~~H~~~E~v~i~~l~~~~~il~~~l~~~~~ 411 (412)
T PRK12892 375 -FVPSK-----GGISHNPAEDTSPADLAQGARVLADTLRRLAR 411 (412)
T ss_pred -EeccC-----CCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 55543 24689999999999999999999999998865
No 48
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=302.04 Aligned_cols=295 Identities=14% Similarity=0.059 Sum_probs=206.9
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+++.+.|.++| ++||+|||||+ ||+++++|.|+++|++++.+++++|.|+|++|||+|+ |+..++
T Consensus 82 gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~ 161 (444)
T PRK07205 82 CHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYN 161 (444)
T ss_pred EeeccCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHH
Confidence 799999997766785544 67899999995 8999999999999999998899999999999999986 888887
Q ss_pred HcCCCC----Ccce---eeEeccC------CCCCccEEEeecC-----------------------cceeee----eEEE
Q 020658 73 QEGVLE----NVEA---IFGLHLV------HKYPTGVVASRPG-----------------------DFLAGC----GSFK 112 (323)
Q Consensus 73 ~~~~~~----~~d~---~~~~~~~------~~~~~g~~~~~~g-----------------------~~~~g~----~~~~ 112 (323)
+..... ..|. ++..+.+ .++|+..+....| .++.|. .+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~v~~~ekG~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~ 241 (444)
T PRK07205 162 EVEEQATMGFAPDSSFPLTYAEKGLLQAKLVGPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENE 241 (444)
T ss_pred hCCCCCCeeECCCCCCceEEEEeceEEEEEEeCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcE
Confidence 742111 1111 0000000 0111111100000 011221 2349
Q ss_pred EEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhh-----hcc--------------CC-CCCCeeEEEEEEEcCCccccc
Q 020658 113 AKISGKGGHAAIPQHCIDPILAVSSSVISLQNIV-----SRE--------------ID-PLDSQVVSVAMINGGSSYNMI 172 (323)
Q Consensus 113 i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~-----~~~--------------~~-~~~~~~~~v~~i~gg~~~n~i 172 (323)
|+++|+++|||.|+.|.|||..|++++..+++.. .+. .. ....+++|++. .|+|
T Consensus 242 v~v~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~------~nvv 315 (444)
T PRK07205 242 VTVLGKSVHAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAG------LTIT 315 (444)
T ss_pred EEEEeEEcccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEE------EEEE
Confidence 9999999999999999999999999998886421 000 01 12345667754 4899
Q ss_pred cCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCccccc
Q 020658 173 PDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKL 252 (323)
Q Consensus 173 P~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~ 252 (323)
|++|++.+|+|+.|+++.+++.++|++++++ .++. ++... ..+++ ..+.++++++.+++++++.+|.+..
T Consensus 316 P~~a~~~ld~R~~p~~~~e~v~~~i~~~~~~----~~v~--~~~~~-~~~p~-~~~~~~~lv~~l~~~~~~~~g~~~~-- 385 (444)
T PRK07205 316 KEKSEIRIDIRIPVLADKEKLVQQLSQKAQE----YGLT--YEEFD-YLAPL-YVPLDSELVSTLMSVYQEKTGDDSP-- 385 (444)
T ss_pred CCEEEEEEEEeCCCCCCHHHHHHHHHHHHHH----cCcE--EEEec-CCCce-eeCCCcHHHHHHHHHHHHHhCCCCc--
Confidence 9999999999999999999999999998764 3333 32221 11221 2456788999999999998887642
Q ss_pred CCCCCcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 020658 253 APIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 318 (323)
Q Consensus 253 ~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~~ 318 (323)
...++|++|...+ .|.+ .+||.. |++...+|++||+++++++.+++++|..++.+++++
T Consensus 386 ~~~~gg~~~~~~~---~~~i--~~G~~~--Pg~~~~aH~~nE~v~i~~l~~~~~~l~~~l~~l~~~ 444 (444)
T PRK07205 386 AQSSGGATFARTM---PNCV--AFGALF--PGAPQTEHQANEHIVLEDLYRAMDIYAEAIYRLTTD 444 (444)
T ss_pred eEEeccHHHHHhC---CCcE--EECCcc--CCCCCCCcCcccCccHHHHHHHHHHHHHHHHHHhcC
Confidence 3445565554432 2332 377553 355578999999999999999999999999999864
No 49
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=6.1e-39 Score=296.18 Aligned_cols=285 Identities=15% Similarity=0.168 Sum_probs=221.2
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCC-----c-cHHHHHHc
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-----T-GAKDMIQE 74 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-----~-G~~~~~~~ 74 (323)
||+||||.+. .+|| |++++++|+|+++|++.+..++++|.|+|++|||.| . |+.++.+.
T Consensus 83 ~H~DtVp~~g------------~~dg---k~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~ 147 (412)
T PRK12893 83 SHLDTQPTGG------------RFDG---ALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGA 147 (412)
T ss_pred ecccCCCCCC------------cccc---hhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCc
Confidence 7999999743 2233 678999999999999988889999999999999986 2 77777644
Q ss_pred CCC-------------------------------CCcceeeEeccCCC---CCccEEEeecCcceeeeeEEEEEEEeCCC
Q 020658 75 GVL-------------------------------ENVEAIFGLHLVHK---YPTGVVASRPGDFLAGCGSFKAKISGKGG 120 (323)
Q Consensus 75 ~~~-------------------------------~~~d~~~~~~~~~~---~~~g~~~~~~g~~~~g~~~~~i~~~G~~~ 120 (323)
... .+.+..+.+|..++ .+.+. ......+++|..+++|+++|+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~G~~a 226 (412)
T PRK12893 148 LPLDDALARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEVTVEGQAA 226 (412)
T ss_pred CChHHHHhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEEEEEEECC
Confidence 210 01122333332111 00010 01123567899999999999999
Q ss_pred ccCC-CC-CCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcC-CccccccCceEEEEEEeccChhHHHHHHHHH
Q 020658 121 HAAI-PQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRERI 197 (323)
Q Consensus 121 Hss~-p~-~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg-~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i 197 (323)
|+|. |+ .|.|||..|++++..|+++..+.. ...+++++.+++| ...|+||++|++.+|+|+.|+++.+++.++|
T Consensus 227 Has~~p~~~G~NAI~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i 303 (412)
T PRK12893 227 HAGTTPMAMRRDALVAAARIILAVERIAAALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAAL 303 (412)
T ss_pred CcCCCcchhccCHHHHHHHHHHHHHHHHHhcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHH
Confidence 9986 85 799999999999999988753321 1468899999974 7999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceEEEec
Q 020658 198 EEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLG 277 (323)
Q Consensus 198 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G 277 (323)
++++++.+..++++++++.. ..+++...++++++.+++++++. |.++. +..++|+||+++|.+.+|+++. +|
T Consensus 304 ~~~~~~~~~~~~~~v~~~~~----~~~~~~~~d~~l~~~l~~~~~~~-g~~~~--~~~~~g~tD~~~~~~~~p~~v~-~g 375 (412)
T PRK12893 304 RAACAKIAAARGVQVTVETV----WDFPPVPFDPALVALVEAAAEAL-GLSHM--RMVSGAGHDAMFLARVAPAAMI-FV 375 (412)
T ss_pred HHHHHHHHHHcCCeEEEEEE----ecCCCcCCCHHHHHHHHHHHHHc-CCCcc--ccCCccHHHHHHHHhhCCEEEE-Ee
Confidence 99999887777877776543 23556677899999999999875 87653 4668899999999988886554 55
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 020658 278 MLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 278 ~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
|+. ...+|++||+++++++.+++++|..++.+++.
T Consensus 376 p~~-----~~~~Hs~dE~v~i~~l~~~~~i~~~ll~~~~~ 410 (412)
T PRK12893 376 PCR-----GGISHNEAEDTEPADLAAGANVLLHAVLELAG 410 (412)
T ss_pred ecC-----CCCCCCccccCCHHHHHHHHHHHHHHHHHhhc
Confidence 543 14689999999999999999999999999875
No 50
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.5e-38 Score=291.82 Aligned_cols=286 Identities=15% Similarity=0.118 Sum_probs=221.7
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCC-----c-cHHHHHHc
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-----T-GAKDMIQE 74 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-----~-G~~~~~~~ 74 (323)
||+||||++.. .++|++++++++|+++|++.+..++++|.|++++|||.| . |++.++++
T Consensus 80 gH~DtVp~~g~---------------~d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~ 144 (413)
T PRK09290 80 SHLDTVPNGGR---------------FDGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGA 144 (413)
T ss_pred cCccCCCCCCC---------------cCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcc
Confidence 79999998431 134789999999999999988888999999999999984 2 77766532
Q ss_pred CC----------------------CCCcceeeEe--ccCC-----------C---CCccEEEeecCcceeeeeEEEEEEE
Q 020658 75 GV----------------------LENVEAIFGL--HLVH-----------K---YPTGVVASRPGDFLAGCGSFKAKIS 116 (323)
Q Consensus 75 ~~----------------------~~~~d~~~~~--~~~~-----------~---~~~g~~~~~~g~~~~g~~~~~i~~~ 116 (323)
.. -.+.|++++. +|.. + +|.+. ......+++|..+++|+++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~-~~~i~~~~kG~~~~~i~v~ 223 (413)
T PRK09290 145 LTPEDALALRDADGVSFAEALAAIGYDGDEAVGAARARRDIKAFVELHIEQGPVLEAEGL-PIGVVTGIVGQRRYRVTFT 223 (413)
T ss_pred cCHHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeccCHHHHHCCC-cEEEEeeeeccEEEEEEEE
Confidence 10 0123444422 1110 0 12211 0112356789999999999
Q ss_pred eCCCccC-CC-CCCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcC-CccccccCceEEEEEEeccChhHHHHH
Q 020658 117 GKGGHAA-IP-QHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNAL 193 (323)
Q Consensus 117 G~~~Hss-~p-~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg-~~~n~iP~~~~~~~~~R~~p~~~~~~~ 193 (323)
|+++|+| .| +.|.|||..+++++..|+++..+.. ...+++++.+.+| ...|+||++|++.+|+|+.|+++.+++
T Consensus 224 Gk~aHas~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v 300 (413)
T PRK09290 224 GEANHAGTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDAL 300 (413)
T ss_pred EECCCCCCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHH
Confidence 9999998 58 5789999999999999987643221 2367899999965 799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceE
Q 020658 194 RERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSF 273 (323)
Q Consensus 194 ~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~ 273 (323)
.++|++++++.+...+++++++.. ..++++..++++++.+++++++. |.++. ...+.|++|+++|.+.+|+++
T Consensus 301 ~~~i~~~~~~~~~~~~~~~e~~~~----~~~~~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~g~tDa~~~~~~iP~~~ 373 (413)
T PRK09290 301 VAELRAAAEAIAARRGVEVEIELI----SRRPPVPFDPGLVAALEEAAERL-GLSYR--RLPSGAGHDAQILAAVVPTAM 373 (413)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEE----ecCCCccCCHHHHHHHHHHHHHc-CCCcc--ccCCccchHHHHHhccCCEEE
Confidence 999999999887777887777654 23556667899999999999876 76653 456889999999987899865
Q ss_pred EEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 020658 274 LLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 318 (323)
Q Consensus 274 ~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~~ 318 (323)
+ +||.. ...+|++||+++++++.+++++|+.++.+|++.
T Consensus 374 ~-~gp~~-----~~~~H~~dE~v~i~~l~~~~~v~~~~l~~l~~~ 412 (413)
T PRK09290 374 I-FVPSV-----GGISHNPAEFTSPEDCAAGANVLLHALLELAEE 412 (413)
T ss_pred E-EeccC-----CCCCCCccccCCHHHHHHHHHHHHHHHHHHhcc
Confidence 4 44432 145899999999999999999999999999864
No 51
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-39 Score=304.09 Aligned_cols=296 Identities=13% Similarity=0.115 Sum_probs=219.8
Q ss_pred CCCCccccccCCCCCc-----cc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-c
Q 020658 1 MPNGSASLQELVEWEH-----KS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-G 67 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~-----~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G 67 (323)
||+||||++. ++|.+ +| ++||++||||+ ||+++++++|++.|++.+.+++++|.|+|++|||.|+ |
T Consensus 116 gH~DvVp~~~-~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G 194 (520)
T PRK06156 116 THADVVPANP-ELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDP 194 (520)
T ss_pred EecCccCCCC-ccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchh
Confidence 7999999965 36776 65 46899999995 8999999999999999888888999999999999987 9
Q ss_pred HHHHHHcCCCCCcceeeEeccC----CCCCc-----------------------------cE------EEeec-------
Q 020658 68 AKDMIQEGVLENVEAIFGLHLV----HKYPT-----------------------------GV------VASRP------- 101 (323)
Q Consensus 68 ~~~~~~~~~~~~~d~~~~~~~~----~~~~~-----------------------------g~------~~~~~------- 101 (323)
+..+++++.. .++.++++.+ .+++. +. ..+..
T Consensus 195 ~~~~~~~~~~--~~~~~~~D~~~~~~~~E~~~~~~~i~~~~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~ 272 (520)
T PRK06156 195 LKYYLERYTP--PDYNITLDAEYPVVTAEKGWGTIMATFPKRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALA 272 (520)
T ss_pred HHHHHHhcCC--CCeEEeeCCCCceEEEecceEEEEEEecCcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHH
Confidence 9998887532 2333322110 00110 00 00000
Q ss_pred ----------Ccceeeee---------EEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhc--------------
Q 020658 102 ----------GDFLAGCG---------SFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSR-------------- 148 (323)
Q Consensus 102 ----------g~~~~g~~---------~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~-------------- 148 (323)
-.+++|.. |++|+++|+++|+|.|+.|.|||..|++++..|++....
T Consensus 273 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHsS~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~ 352 (520)
T PRK06156 273 AALQAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHSSTPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLV 352 (520)
T ss_pred HHHHHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCCCCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhh
Confidence 00112333 899999999999999999999999999999998752100
Q ss_pred -------------cCCCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEE
Q 020658 149 -------------EIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVD 215 (323)
Q Consensus 149 -------------~~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~ 215 (323)
.....+..+++++.+.+|. +.|++.+|+|++|+++.+++.++|++.+++.+...++++++.
T Consensus 353 ~~~~~g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~ 426 (520)
T PRK06156 353 GLDYLGEKFGVAYKDDFMGPLTLSPTVVGQDD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDID 426 (520)
T ss_pred CCCCccCcCCccccCCCccCcEEeeeEEEEeC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEe
Confidence 0011234567888888774 689999999999999999999999999988665566666654
Q ss_pred eeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCC
Q 020658 216 FSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFT 295 (323)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~ 295 (323)
... .++ .....++++++.+++++++++|.++. +..++|+||++++.. + ..|||.. ||....+|++||+
T Consensus 427 ~~~--~~p-~~~~~d~~lv~~l~~a~~~~~G~~~~--~~~~~ggTDa~~~~~----~-v~fGP~~--~g~~~~aHt~dE~ 494 (520)
T PRK06156 427 YYW--GEP-MVRDPKGPWLKTLLDVFGHFTGLDAK--PVAIAGSTNAKLFPN----A-VSFGPAM--PGVKYTGHTENEF 494 (520)
T ss_pred ecC--CCc-eeeCCCCHHHHHHHHHHHHHhCCCCc--eeeecChhhhhhCCc----c-EEEcCCC--CCCCCCCcCcccC
Confidence 221 121 22345788999999999999898763 567889999988742 2 3478764 2333568999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHh
Q 020658 296 IDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 296 v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
++++++.+++++|+.++.++++
T Consensus 495 V~ie~l~~~~~i~~~~l~~l~~ 516 (520)
T PRK06156 495 KTVEQFMLDLQMYTEMLIRIGN 516 (520)
T ss_pred CCHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999986
No 52
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=6.6e-39 Score=294.99 Aligned_cols=271 Identities=16% Similarity=0.147 Sum_probs=208.4
Q ss_pred CCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCccHHHHHHcCCCCCcceeeEeccCCCCCccEEEee
Q 020658 21 DGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTGAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASR 100 (323)
Q Consensus 21 ~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~ 100 (323)
++.+||+||||++|++|+|++.|++.+..++++|.|+|++|||+|+|++.+..++. ++++.+.++ ++|+|.+.++
T Consensus 135 g~~l~G~D~KgglAa~l~A~~~L~e~~~~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i~---gep~g~i~~~ 209 (410)
T TIGR01882 135 GTTLLGADDKAGIAEIMTAADYLINHPEIKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTVD---GGPLGELEYE 209 (410)
T ss_pred CCEeecccCHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEeC---CCCCCeEEEc
Confidence 45999999999999999999999986444689999999999999878888765532 345555553 3566765433
Q ss_pred cCcceeeeeEEEEEEEeCCCccCCC-CCCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcCCccccccCceEEE
Q 020658 101 PGDFLAGCGSFKAKISGKGGHAAIP-QHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVA 179 (323)
Q Consensus 101 ~g~~~~g~~~~~i~~~G~~~Hss~p-~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~ 179 (323)
..|..+++|+++|+++|++.+ +.+.||+..+.+++..+.... .+ ..++.+.+.+++| ..|.+|++|++.
T Consensus 210 ----~~g~~~~~I~v~Gk~aHa~~~~~~g~nAi~~a~~~~~~l~~~~----~~-~~t~~~~g~i~~g-~i~giPd~a~l~ 279 (410)
T TIGR01882 210 ----TFSAAAAKITIQGNNVHPGTAKGKMINAAQIAIDLHNLLPEDD----RP-EYTEGREGFFHLL-SIDGTVEEAKLH 279 (410)
T ss_pred ----cccceEEEEEEEEEecCcccChHHHHHHHHHHHHHHHhcCCcC----CC-ccccceeEEEEEE-eEEEecCEEEEE
Confidence 247899999999999999975 678999999999877665321 11 0111122345555 467799999999
Q ss_pred EEEeccChhHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCc
Q 020658 180 GTFRAFNKKRFNALRERIEEIIKGQAAVHRC-SAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTG 258 (323)
Q Consensus 180 ~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g 258 (323)
+++|+.+.++.+++.++|++++++.++.+++ .+++++...........+.++++++.+.+++++. |.++. ...+.|
T Consensus 280 ~diR~~~~e~~e~i~~~i~~i~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~-G~~~~--~~~~~g 356 (410)
T TIGR01882 280 YIIRDFEKENFQERKELMKRIVEKMNNEYGQDRIKLDMNDQYYNMAEKIEKVMEIVDIAKQAMENL-GIEPK--ISPIRG 356 (410)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEEeeecChhhccCCCHHHHHHHHHHHHHh-CCCCc--ccccce
Confidence 9999999999999999999999998877764 4555543211111124567899999999999985 87763 456789
Q ss_pred CCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 020658 259 SEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 259 ~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
+||++++.. ++|++. +|++. ..+|++|||++++++.+++++|..++..+.+
T Consensus 357 gtDa~~~~~~Gip~~~--~G~G~------~~aHt~dE~v~i~~l~~~~~~~~~li~~~~~ 408 (410)
T TIGR01882 357 GTDGSQLSYMGLPTPN--IFAGG------ENMHGRFEYISVDNMVKAVDVIVEIAKLNEE 408 (410)
T ss_pred echHHHHHhCCCCCCe--EcCCc------ccCcCCceEEEHHHHHHHHHHHHHHHHHHhh
Confidence 999999987 589876 46543 4599999999999999999999999988754
No 53
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=7.5e-39 Score=287.85 Aligned_cols=274 Identities=14% Similarity=0.077 Sum_probs=209.7
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHcCC
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGV 76 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~ 76 (323)
||+||||. .|+.. .+||++||||+ ||+++++++|++.|++. ..+|.|+|++|||.|+ |+++++++..
T Consensus 57 ~H~D~vp~----~~~~~-~~~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~ 127 (336)
T TIGR01902 57 GHVDTVPG----YIPVK-IEGGLLYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY 127 (336)
T ss_pred ccccccCC----CcccE-EeCCEEEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC
Confidence 79999995 24322 57899999995 89999999999999864 4689999999999986 9999988743
Q ss_pred CCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCCCCe
Q 020658 77 LENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREIDPLDSQ 156 (323)
Q Consensus 77 ~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~ 156 (323)
.+++++.++.. .+.+ ..+++|..+++++++|+++|+|.|+ ||+..|.++++.|.+.... .......
T Consensus 128 ---~~~~ii~ept~---~~~i----~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~-~~~~~~~ 193 (336)
T TIGR01902 128 ---PFYVIVGEPSG---AEGI----TLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQ-PENYDKP 193 (336)
T ss_pred ---CCEEEEecCCC---Ccce----eeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhcc-ccCCCCC
Confidence 24666654321 1122 2456899999999999999999875 5999999999998732211 1112235
Q ss_pred eEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHH
Q 020658 157 VVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQH 236 (323)
Q Consensus 157 ~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
+++++.++||...|+||++|++++|+|+.|+++.+++.++|++. ...+ ++... ..+++ ..+.++++++.
T Consensus 194 ~~~~~~i~gg~~~nvIP~~a~~~idiR~~p~~~~~~~~~~i~~~-------~~~~--~~~~~-~~~p~-~~~~~~~lv~~ 262 (336)
T TIGR01902 194 SIVPTIIRFGESYNDTPAKLELHFDLRYPPNNKPEEAIKEITDK-------FPIC--LEIVD-ETPPY-KVSRNNPLVRA 262 (336)
T ss_pred cceeEEEEccCCCcCCCceEEEEEEEeeCCCCCHHHHHHHHHhc-------cCce--EEEEe-ccCce-ecCCCCHHHHH
Confidence 78899999999999999999999999999999999998888761 2233 33321 11222 23457889999
Q ss_pred HHHHHHHHhCCcccccCCCCCcCCcHHHHHhh--ccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Q 020658 237 VRRVTAEILGEENVKLAPIFTGSEDFAFFLDE--IPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHS 314 (323)
Q Consensus 237 ~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~--~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~ 314 (323)
++++++++ +.++. ...+.|++|++++.+. +|++ .+||+. ...+|++||+++++++.+++++|..++.+
T Consensus 263 ~~~a~~~~-~~~~~--~~~~~g~tD~~~~~~~~g~p~v--~~Gpg~-----~~~aH~~nE~v~i~~l~~~~~~~~~~l~~ 332 (336)
T TIGR01902 263 FVRAIRKQ-GMKPR--LKKKTGTSDMNILAPIWTVPMV--AYGPGD-----STLDHTPQEKISLAEYLIGIKTLMLAIEE 332 (336)
T ss_pred HHHHHHHc-CCCeE--EeeccccCccceeccccCCCeE--EECCCC-----cccCCCCcceeEHHHHHHHHHHHHHHHHH
Confidence 99999987 65543 3556788999999874 5655 377754 25689999999999999999999999999
Q ss_pred HHhc
Q 020658 315 YLVN 318 (323)
Q Consensus 315 ~~~~ 318 (323)
++++
T Consensus 333 l~~~ 336 (336)
T TIGR01902 333 LWQK 336 (336)
T ss_pred HhcC
Confidence 8763
No 54
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=3.2e-37 Score=284.70 Aligned_cols=283 Identities=16% Similarity=0.132 Sum_probs=218.1
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc------cHHHHHHc
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT------GAKDMIQE 74 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~------G~~~~~~~ 74 (323)
||+||||.+. . .++|++++++|+|++.|++.+..++++|.|++++|||.|+ |++.+.+.
T Consensus 81 ~H~DtVp~~g------------~---~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~ 145 (414)
T PRK12890 81 SHLDTVPNGG------------R---YDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGT 145 (414)
T ss_pred CcccCCCCCC------------C---cCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcc
Confidence 7999999842 1 3568899999999999999888889999999999999742 56544332
Q ss_pred ------------------------CCCCCcceeeE-------------eccCCC---CCccEEEeecCcceeeeeEEEEE
Q 020658 75 ------------------------GVLENVEAIFG-------------LHLVHK---YPTGVVASRPGDFLAGCGSFKAK 114 (323)
Q Consensus 75 ------------------------~~~~~~d~~~~-------------~~~~~~---~~~g~~~~~~g~~~~g~~~~~i~ 114 (323)
|. ..|.+.. +|...+ .+.+. ......+++|..+++|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~ 222 (414)
T PRK12890 146 LDVEAVLATRDDDGTTLAEALRRIGG--DPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVT 222 (414)
T ss_pred cChHHHHhccCCCCCCHHHHHHHcCC--ChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEE
Confidence 21 1222221 111110 00011 01123467899999999
Q ss_pred EEeCCCccCC-CC-CCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcC-CccccccCceEEEEEEeccChhHHH
Q 020658 115 ISGKGGHAAI-PQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFN 191 (323)
Q Consensus 115 ~~G~~~Hss~-p~-~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg-~~~n~iP~~~~~~~~~R~~p~~~~~ 191 (323)
++|+++|+|. |+ .+.|||..|++++..|+++..+.. ...+++++.+++| ...|+||++|++.+|+|+.|.++.+
T Consensus 223 v~Gk~aHas~~P~~~g~nAI~~~~~~i~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~ 299 (414)
T PRK12890 223 VEGEANHAGTTPMDLRRDALVAAAELVTAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLE 299 (414)
T ss_pred EEEECCCCCcCChhhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHH
Confidence 9999999985 85 458999999999999988753322 3567899999974 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccc
Q 020658 192 ALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPG 271 (323)
Q Consensus 192 ~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~ 271 (323)
++.++|++++++.+...+++++++.. ..+++...++++++.+.+++++. |.++. ...++|+||+++|.+..|.
T Consensus 300 ~i~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~-g~~~~--~~~~~g~tDa~~~~~~gp~ 372 (414)
T PRK12890 300 AAEAALLAELEAIAAARGVRIELERL----SRSEPVPCDPALVDAVEAAAARL-GYPSR--RMPSGAGHDAAAIARIGPS 372 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEEe----ecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCCcccHHHHHHHhhCCE
Confidence 99999999999887777887777653 23556677899999999999885 87653 4568899999999986666
Q ss_pred eEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 020658 272 SFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 272 ~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
++. +||+. ...+|++||++++++|.+++++|..++.+|.+
T Consensus 373 ~~~-~gp~~-----~~~aHs~dE~v~i~~l~~~~~i~~~ll~~l~~ 412 (414)
T PRK12890 373 AMI-FVPCR-----GGISHNPEEAMDPEDLAAGARVLLDAVLRLDR 412 (414)
T ss_pred EEE-EecCC-----CCCCCCcCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 544 45543 24699999999999999999999999999865
No 55
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=4.8e-37 Score=282.13 Aligned_cols=283 Identities=15% Similarity=0.148 Sum_probs=217.0
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCC-----Cc-cHHHHHHc
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER-----GT-GAKDMIQE 74 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-----g~-G~~~~~~~ 74 (323)
||+||||.+. +.+|+ .+++++|++++.|++.+.+++++|.|++++|||. |. |++.++.+
T Consensus 74 ~H~DtV~~gg------------~~dg~---~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~ 138 (401)
T TIGR01879 74 SHIDTVVNGG------------NFDGQ---LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGL 138 (401)
T ss_pred cccccCCCCC------------ccCCH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcc
Confidence 6999999842 23332 3789999999999999999999999999999997 33 78777642
Q ss_pred CCC---------------------------------CCcceeeEeccCCC---CCccEEEeecCcceeeeeEEEEEEEeC
Q 020658 75 GVL---------------------------------ENVEAIFGLHLVHK---YPTGVVASRPGDFLAGCGSFKAKISGK 118 (323)
Q Consensus 75 ~~~---------------------------------~~~d~~~~~~~~~~---~~~g~~~~~~g~~~~g~~~~~i~~~G~ 118 (323)
... .++++.+.+|.+.+ ++.|. ......+++|..|++|+++|+
T Consensus 139 ~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~Hieqg~~l~~~g~-~~~v~~~~~G~~~~~i~v~G~ 217 (401)
T TIGR01879 139 ANPEDVRNICDAKGISFAEAMKACGPDLPNQPLRPRGDIKAYVELHIEQGPVLESNGQ-PIGVVNAIAGQRWYKVTLNGE 217 (401)
T ss_pred cchhHHHhCcCCCCCCHHHHHHHcCCCcccccccccccccEEEEEEEcCCcChhhCCC-eEEEEEEecCcEEEEEEEEEE
Confidence 100 01122333333222 11111 112335678999999999999
Q ss_pred CCccCC-CC-CCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcC-CccccccCceEEEEEEeccChhHHHHHHH
Q 020658 119 GGHAAI-PQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNALRE 195 (323)
Q Consensus 119 ~~Hss~-p~-~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg-~~~n~iP~~~~~~~~~R~~p~~~~~~~~~ 195 (323)
++|++. |+ .+.||+..+++++..|+++..+.. ...+.+++.+++| ...|+||++|++.+|+|+.|+++.+++.+
T Consensus 218 ~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~ 294 (401)
T TIGR01879 218 SNHAGTTPMSLRRDPLVAASRIIHQVEEKAKRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQ 294 (401)
T ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHH
Confidence 999996 53 578999999999999988753321 2356789999985 77999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceEEE
Q 020658 196 RIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLL 275 (323)
Q Consensus 196 ~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~ 275 (323)
+|++++++.+...+++++++... .+++...|+++++.+++++++. |.++. ...++++||+++|.+..|..+ .
T Consensus 295 ~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~lv~~l~~a~~~~-g~~~~--~~~~~ggtDa~~~~~~~~~~v-~ 366 (401)
T TIGR01879 295 QLENDIKAISDERDIGIDIERWM----DEEPVPCSEELVAALTELCERL-GYNAR--VMVSGAGHDAQILAPIVPIGM-I 366 (401)
T ss_pred HHHHHHHHHHHHcCceEEEEEee----cCCCcCCCHHHHHHHHHHHHHc-CCCcc--ccccchHHHHHHHHhhCCEEE-E
Confidence 99999998877778888776542 3456677999999999999976 77663 456889999999998655433 3
Q ss_pred ecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 020658 276 LGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 315 (323)
Q Consensus 276 ~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~ 315 (323)
+||+. ...+|++||+++++++.+++++|+.++.++
T Consensus 367 fgPg~-----~~~aH~~dE~v~~e~l~~~~~vl~~~i~~l 401 (401)
T TIGR01879 367 FIPSI-----NGISHNPAEWSNITDCAEGAKVLYLMVYQL 401 (401)
T ss_pred EecCC-----CCCcCCCCccCCHHHHHHHHHHHHHHHHhC
Confidence 67654 256899999999999999999999998764
No 56
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=1.9e-37 Score=286.98 Aligned_cols=287 Identities=18% Similarity=0.142 Sum_probs=204.5
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||||+++ .|.++| +++|+|||||+ ||+++++++|++.|++.+.+++++|.|+|++|||+|+ |+.+++
T Consensus 74 gH~D~Vp~~~--~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l 151 (447)
T TIGR01887 74 GHLDVVPAGD--GWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYF 151 (447)
T ss_pred eecCCCCCCC--CCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHH
Confidence 7999999975 575444 57899999995 8999999999999999988889999999999999987 888888
Q ss_pred HcCCCCC----cce---eeEeccC----------------------CCCCccEE------Eee-c---------------
Q 020658 73 QEGVLEN----VEA---IFGLHLV----------------------HKYPTGVV------ASR-P--------------- 101 (323)
Q Consensus 73 ~~~~~~~----~d~---~~~~~~~----------------------~~~~~g~~------~~~-~--------------- 101 (323)
+...... .|. ++..+++ .++|++.+ .+. .
T Consensus 152 ~~~~~~~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~ 231 (447)
T TIGR01887 152 EHEEAPDIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIA 231 (447)
T ss_pred HhcCCCCEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhh
Confidence 7633211 121 2211110 12333321 110 0
Q ss_pred ----CcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHH--Hhhhc---------------------c-CCCC
Q 020658 102 ----GDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQ--NIVSR---------------------E-IDPL 153 (323)
Q Consensus 102 ----g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~--~~~~~---------------------~-~~~~ 153 (323)
|..+++..+++|+++|+++|+|.|+.|.|||..|++++..+. +...+ . ....
T Consensus 232 ~~~~g~~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 311 (447)
T TIGR01887 232 KELEGSFEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVS 311 (447)
T ss_pred cCcceEEEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCc
Confidence 111222237999999999999999999999999999999986 22100 0 0012
Q ss_pred CCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHH
Q 020658 154 DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRI 233 (323)
Q Consensus 154 ~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 233 (323)
+.+++|++.|++| +|++|++.+|+|++|+++.+++++++.+.+. +. ..+.... ..+++ ..+.++++
T Consensus 312 ~~~t~nvg~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~------~~-~~~~~~~-~~~p~-~~~~~~~l 377 (447)
T TIGR01887 312 GDLTMNVGVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNELAKES------GI-VEVTENG-YLKPL-YVPKDDPL 377 (447)
T ss_pred CCcEEEEEEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh------Cc-EEEEEcc-CCCCe-EECCCCHH
Confidence 4568999999988 4899999999999999999987777774432 21 2222111 11222 22457899
Q ss_pred HHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHH
Q 020658 234 YQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFA 312 (323)
Q Consensus 234 ~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~ 312 (323)
++.+.+++++.+|.++. +....|+||++++. .. +.+||.. ||++.++|++||++++++|..++++|..++
T Consensus 378 v~~l~~~~~~~~g~~~~--~~~~~ggtda~~~~----~~-i~~Gp~~--pG~~~~aH~~dE~v~i~~l~~~~~i~~~~~ 447 (447)
T TIGR01887 378 VQTLMKVYEKQTGDEGT--PVAIGGGTYARLME----NG-VAFGALF--PGEEDTMHQANEYIMIDDLLLATAIYAEAI 447 (447)
T ss_pred HHHHHHHHHHHhCCCCC--eeEecchhhhhhCC----Cc-EEeCCCC--CCCCCCccCCCcceeHHHHHHHHHHHHHhC
Confidence 99999999999887763 45567888877653 33 3367654 455678999999999999999999998763
No 57
>PRK08554 peptidase; Reviewed
Probab=100.00 E-value=1.7e-35 Score=273.54 Aligned_cols=297 Identities=17% Similarity=0.126 Sum_probs=205.6
Q ss_pred CCCCcccccc--CCCCCccc-CCCCceecCc---chHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHH
Q 020658 1 MPNGSASLQE--LVEWEHKS-KIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQ 73 (323)
Q Consensus 1 ~~~D~vP~~~--~~~w~~~~-~~~g~~~g~G---~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~ 73 (323)
||+||||+.+ |..+||.+ +++|++|||| |||+++++++|+++|++. .++++|.|+|++|||+|+ ++..+++
T Consensus 70 gH~DtVp~~~~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~i~l~~~~dEE~g~~~~~~~~~ 147 (438)
T PRK08554 70 AHFDVVPVNPEEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGKVIFAFTGDEEIGGAMAMHIAE 147 (438)
T ss_pred eccccCCCCccccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCCEEEEEEcccccCccccHHHHH
Confidence 7999999975 23335555 5789999999 699999999999999874 367899999999999986 4446554
Q ss_pred cC--CCCCcceeeEeccCCCCCccEEEeecCcc-----------eeee---eEEEEEEEeCC-CccCCCCCCC--cHHHH
Q 020658 74 EG--VLENVEAIFGLHLVHKYPTGVVASRPGDF-----------LAGC---GSFKAKISGKG-GHAAIPQHCI--DPILA 134 (323)
Q Consensus 74 ~~--~~~~~d~~~~~~~~~~~~~g~~~~~~g~~-----------~~g~---~~~~i~~~G~~-~Hss~p~~g~--nAi~~ 134 (323)
.. ....+|++|+.++....+. +..+.|.. -.|. .++.+++.|.+ +|++.+..+. ||+..
T Consensus 148 ~~~~~~~~~~~~iv~Ept~~~~~--~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~ 225 (438)
T PRK08554 148 KLREEGKLPKYMINADGIGMKPI--IRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIA 225 (438)
T ss_pred HHHhcCCCCCEEEEeCCCCCcch--hhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHH
Confidence 31 1124688888765332211 11111100 0122 35566666665 9999776655 46888
Q ss_pred HHHHHHHHHHhhhccC-----C--CCCCeeEEEEEEEcCC-----------------------------------ccccc
Q 020658 135 VSSSVISLQNIVSREI-----D--PLDSQVVSVAMINGGS-----------------------------------SYNMI 172 (323)
Q Consensus 135 ~~~~l~~l~~~~~~~~-----~--~~~~~~~~v~~i~gg~-----------------------------------~~n~i 172 (323)
+.+++.++........ . .....++++....+|. ..|++
T Consensus 226 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~ 305 (438)
T PRK08554 226 ASHFLRESNVLAVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVY 305 (438)
T ss_pred HHHHHhhcCceEEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceE
Confidence 8887777654311000 0 0111233332223333 55665
Q ss_pred ---cCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcc
Q 020658 173 ---PDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEEN 249 (323)
Q Consensus 173 ---P~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~ 249 (323)
|++|++++|+|+.| .+.+++.++|+++++.. ..+++++++... ..+...++.++++++.+++++++. |.++
T Consensus 306 ~i~~g~a~~~~DiR~~~-~~~e~v~~~i~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~lv~~~~~~~~~~-g~~~ 379 (438)
T PRK08554 306 SFAEGKHVLKLDIRAMS-YSKEDIERTLKEVLEFN--LPEAEVEIRTNE--KAGYLFTPPDEEIVKVALRVLKEL-GEDA 379 (438)
T ss_pred EecCCeEEEEEEEEecC-CCHHHHHHHHHHHhhcc--CCCceEEEEecc--CCCCcCCCCChHHHHHHHHHHHHh-CCCc
Confidence 99999999999988 68899999999988643 135555554332 123334556899999999999884 8776
Q ss_pred cccCCCCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 020658 250 VKLAPIFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 250 ~~~~~~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
.+...+|+||+++++. ++|++. +||+. ..+|++|||+++++|.+++++|..++.+|+.
T Consensus 380 --~~~~~~GgtDa~~~~~~Gip~v~--~Gp~~------~~~H~~~E~v~i~~l~~~~~i~~~~i~~l~~ 438 (438)
T PRK08554 380 --EPVEGPGASDSRYFTPYGVKAID--FGPKG------GNIHGPNEYVEIDSLKKMPEVYKRIALRLLG 438 (438)
T ss_pred --EEEecCCchHHHHHHhcCCCceE--ECCCC------CCCCCCcceEEHHHHHHHHHHHHHHHHHHhC
Confidence 3677899999999976 699865 67754 4689999999999999999999999998863
No 58
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=1.3e-34 Score=265.52 Aligned_cols=271 Identities=15% Similarity=0.138 Sum_probs=212.9
Q ss_pred hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCC-----c-cHHHHHH------------------------cCC---
Q 020658 30 DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-----T-GAKDMIQ------------------------EGV--- 76 (323)
Q Consensus 30 kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-----~-G~~~~~~------------------------~~~--- 76 (323)
..++++.|++++.|++++.+++++|.+++.++||.+ . |++.+.- .|+
T Consensus 90 ~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~ 169 (406)
T TIGR03176 90 QFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLR 169 (406)
T ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCcc
Confidence 357899999999999999999999999999999975 2 5655541 111
Q ss_pred -----CCCcceeeEeccCCC--CC-ccEEEeecCcceeeeeEEEEEEEeCCCccCCCCC--CCcHHHHHHHHHHHHHHhh
Q 020658 77 -----LENVEAIFGLHLVHK--YP-TGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQH--CIDPILAVSSSVISLQNIV 146 (323)
Q Consensus 77 -----~~~~d~~~~~~~~~~--~~-~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~--g~nAi~~~~~~l~~l~~~~ 146 (323)
..++++.+.+|.+.+ .+ .|. .+...++++|..+++|+++|+++|+|.|.. +.||+..+++++..+.+..
T Consensus 170 ~~~~~~~~~~~~~elHieqG~~Le~~g~-~igiv~~~~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~l~~~~ 248 (406)
T TIGR03176 170 KAPTVRDDIKAFVELHIEQGCVLESEGQ-SIGVVNAIVGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQSIERA 248 (406)
T ss_pred cccccccccceEEEEEECCCcchHHCCC-eEEEEeecccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 013456677786443 11 222 112235667999999999999999997554 3799999999999998764
Q ss_pred hccCCCCCCeeEEEEEEE-cCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCC
Q 020658 147 SREIDPLDSQVVSVAMIN-GGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLP 225 (323)
Q Consensus 147 ~~~~~~~~~~~~~v~~i~-gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (323)
.+. ....+++++.|+ +|.+.|+||++|++.+|+|+.|.++.+++.++|++.+++.+...+++++++... .. +
T Consensus 249 ~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~~ia~~~g~~~ei~~~~---~~-~ 321 (406)
T TIGR03176 249 KEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMKAIADEMDITIDIDLWM---DE-A 321 (406)
T ss_pred Hhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEe---cC-C
Confidence 321 223589999999 578999999999999999999999999999999999999988888888776532 22 3
Q ss_pred CcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHH
Q 020658 226 PTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGA 305 (323)
Q Consensus 226 ~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~ 305 (323)
+...++++++.+++++++. +.++ ....+++++|+++|.+.+|+++. +||..+ ..+|++||+++++++..++
T Consensus 322 p~~~d~~lv~~l~~a~~~~-~~~~--~~~~sggg~Da~~~~~~vP~~~i-fgp~~~-----g~~H~p~E~v~~e~l~~g~ 392 (406)
T TIGR03176 322 PVPMNKEIVAIIEQLAKAE-KLNY--RLMHSGAGHDAQIFAPRVPTAMI-FVPSIG-----GISHNPAERTNIEDLVEGV 392 (406)
T ss_pred CCCCCHHHHHHHHHHHHHc-CCCc--eecCcccHHHHHHHHHHCCEEEE-EEeCCC-----CCCCCccccCCHHHHHHHH
Confidence 3456789999999999987 4443 24678899999999999999765 444331 4589999999999999999
Q ss_pred HHHHHHHHHHHh
Q 020658 306 VIHAAFAHSYLV 317 (323)
Q Consensus 306 ~~~~~~~~~~~~ 317 (323)
++|..++.++++
T Consensus 393 ~vl~~~l~~l~~ 404 (406)
T TIGR03176 393 KTLADMLYELAY 404 (406)
T ss_pred HHHHHHHHHHhc
Confidence 999999999976
No 59
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=6.2e-35 Score=273.50 Aligned_cols=289 Identities=17% Similarity=0.192 Sum_probs=207.8
Q ss_pred CCCCccccccC---CCCC---ccc-CCCCceecCcc------hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-
Q 020658 1 MPNGSASLQEL---VEWE---HKS-KIDGKMHACGH------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT- 66 (323)
Q Consensus 1 ~~~D~vP~~~~---~~w~---~~~-~~~g~~~g~G~------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~- 66 (323)
||+||||.... ..|. |.+ .+||++||||+ |++++++|++++. .+ .++++|.++|++|||+|.
T Consensus 69 ~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~ 144 (477)
T TIGR01893 69 GHMDMVCEKNEDSLHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMD 144 (477)
T ss_pred eeccccCCCCCCCCCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCch
Confidence 79999998753 3564 444 57899999885 5888888887654 33 356799999999999985
Q ss_pred cHHHHHHcCCCCCcceeeEeccCC------CCCccE-E--E--eecCcceeeeeEEEEEEEe-CCCccCC-CCCCC-cHH
Q 020658 67 GAKDMIQEGVLENVEAIFGLHLVH------KYPTGV-V--A--SRPGDFLAGCGSFKAKISG-KGGHAAI-PQHCI-DPI 132 (323)
Q Consensus 67 G~~~~~~~~~~~~~d~~~~~~~~~------~~~~g~-~--~--~~~g~~~~g~~~~~i~~~G-~~~Hss~-p~~g~-nAi 132 (323)
|++.+..... ..++++..+... +.+.+. + . +.....++|..+++|+++| +++|||. |+.+. ||+
T Consensus 145 Gs~~l~~~~~--~~~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi 222 (477)
T TIGR01893 145 GALGLDENWL--SGKILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANAN 222 (477)
T ss_pred hhhhcChhhc--CCcEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHH
Confidence 9999876532 235555543211 011110 0 0 0011124688999999999 9999985 88885 999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHH--cCC
Q 020658 133 LAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAV--HRC 210 (323)
Q Consensus 133 ~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~--~g~ 210 (323)
..|+++|..|++.. ..+++.+.||.+.|+||++|++++++|.......+.+.+++.+.+++.+.. .++
T Consensus 223 ~~aa~~i~~l~~~~----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 292 (477)
T TIGR01893 223 KLMARVLNELKENL----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQSKFKSEYSELEPNI 292 (477)
T ss_pred HHHHHHHHhhhhcC----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccCCCe
Confidence 99999999987652 267888999999999999999999999777777777777666665544311 111
Q ss_pred --------------------------------------------------------------------------------
Q 020658 211 -------------------------------------------------------------------------------- 210 (323)
Q Consensus 211 -------------------------------------------------------------------------------- 210 (323)
T Consensus 293 ~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~t~n~g~i~~~~~~~~~~i~~R~~~~~~~~~i~~~ 372 (477)
T TIGR01893 293 TIEVSKRENSVKVFSENTTDKLINALNGLPNGVQSVSDEEPGLVESSLNLGVVKTKENKVIFTFLIRSSVESDKDYVTEK 372 (477)
T ss_pred EEEEEECCCcccccCHHHHHHHHHHHHHCCccceeeccCCCCeEEeeeeEEEEEEcCCEEEEEEEeCCCCchhHHHHHHH
Confidence
Q ss_pred --------eEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccce-EEEecccCC
Q 020658 211 --------SAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGS-FLLLGMLND 281 (323)
Q Consensus 211 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~-~~~~G~~~~ 281 (323)
.++++... ..++ ...+.++++++.+.+++++.+|.++. ...++|++|+++|.+.+|.+ ...+||..
T Consensus 373 i~~~~~~~~~~v~~~~-~~~p-~~~~~d~plv~~l~~a~~~~~g~~~~--~~~~~Ggtd~~~~~~~~~~i~~v~~Gp~~- 447 (477)
T TIGR01893 373 IESIAKLAGARVEVSA-GYPS-WQPDPQSNLLDTARKVYSEMFGEDPE--VKVIHAGLECGIISSKIPDIDMISIGPNI- 447 (477)
T ss_pred HHHHhhhcCeEEEEec-CCCc-ccCCCCCHHHHHHHHHHHHHHCCCCe--EEEeecCccHHHHHhhCCCceEEEeCCCC-
Confidence 12222221 1122 12346789999999999999998764 46788999999998865553 34578754
Q ss_pred CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHH
Q 020658 282 SVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSY 315 (323)
Q Consensus 282 ~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~ 315 (323)
..+|++||+++++++.+++++|..++.++
T Consensus 448 -----~~~H~~nE~i~i~~l~~~~~~~~~ll~~~ 476 (477)
T TIGR01893 448 -----YDPHSPNERVSISSVEKVWDFLVKVLERL 476 (477)
T ss_pred -----CCCCCCCceeeHHHHHHHHHHHHHHHHhc
Confidence 46999999999999999999999998654
No 60
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=2.3e-34 Score=267.82 Aligned_cols=289 Identities=16% Similarity=0.168 Sum_probs=213.0
Q ss_pred CCCCccccccC---CCCC---ccc-CCCCceecCcc------hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-
Q 020658 1 MPNGSASLQEL---VEWE---HKS-KIDGKMHACGH------DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT- 66 (323)
Q Consensus 1 ~~~D~vP~~~~---~~w~---~~~-~~~g~~~g~G~------kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~- 66 (323)
||+|+||..+. .+|. |.+ +++|++||||. |++++++|+++ ++.+. ++++|.++|++|||+|+
T Consensus 75 gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ 150 (485)
T PRK15026 75 AHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMD 150 (485)
T ss_pred eeecccCCCCCCccccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcH
Confidence 79999998653 2574 444 47889998885 57888877665 44444 38899999999999996
Q ss_pred cHHHHHHcCCCCCcceeeEeccCCCCCccEEEee-cC-------------cceeeeeEEEEEEEe-CCCccC-CCCCCC-
Q 020658 67 GAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASR-PG-------------DFLAGCGSFKAKISG-KGGHAA-IPQHCI- 129 (323)
Q Consensus 67 G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~-~g-------------~~~~g~~~~~i~~~G-~~~Hss-~p~~g~- 129 (323)
|+..+.. .. .+.+++|.+++. ..|.+... .| ...+|..+++|+++| +++||+ .|+.|+
T Consensus 151 ga~~l~~-~~-~~~~~~i~~e~~---~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~ 225 (485)
T PRK15026 151 GAFGLQS-NW-LQADILINTDSE---EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLG 225 (485)
T ss_pred hHHHhhh-cc-CCcCEEEEeCCC---CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCc
Confidence 9998865 33 357899988753 22333211 11 012477789999999 999999 599999
Q ss_pred cHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHc-
Q 020658 130 DPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVH- 208 (323)
Q Consensus 130 nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~- 208 (323)
|||..|+++|..+.+ .++++++.|+||.+.|+||++|++.+++|....+..+.+.+.+++.+.+.....
T Consensus 226 nAi~~la~~l~~~~~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (485)
T PRK15026 226 NANKLLVRFLAGHAE----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQEILKNELAEKE 295 (485)
T ss_pred cHHHHHHHHHHHhHh----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHHHHHHHHhcccC
Confidence 999999999998541 257899999999999999999999999999887777777777766655322110
Q ss_pred ----------------------------------CC---------eEE----------------EEeec-----------
Q 020658 209 ----------------------------------RC---------SAE----------------VDFSG----------- 218 (323)
Q Consensus 209 ----------------------------------g~---------~~~----------------~~~~~----------- 218 (323)
|+ -++ +.+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Gv~~~s~~~~g~v~~S~Nlg~v~~~~~~~~i~~~~Rs~~~~~~~~i 375 (485)
T PRK15026 296 KNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRNSDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYV 375 (485)
T ss_pred CCeEEEEEEccccccccCHHHHHHHHHHHHHCCcccEEeccCCCCeEEeeeEEEEEEEeCCEEEEEEEecCCCchHHHHH
Confidence 11 000 00000
Q ss_pred ---------------cCCCCCCCcc--cCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccc-eEEEecccC
Q 020658 219 ---------------REHPTLPPTM--NDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPG-SFLLLGMLN 280 (323)
Q Consensus 219 ---------------~~~~~~~~~~--~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~-~~~~~G~~~ 280 (323)
.....+|++. .|+++++.++++|++++|.++. +....+++|++.|.+..|. .+..|||..
T Consensus 376 ~~~i~~~~~~~g~~~~~~~~~p~w~~~~ds~lv~~l~~~y~e~~G~~~~--~~~ihaglEcG~~~~~~p~i~~VsfGP~~ 453 (485)
T PRK15026 376 VSMLDSLGKLAGAKTEAKGAYPGWQPDANSPVMHLVRETYQRLFNKTPN--IQIIHAGLECGLFKKPYPEMDMVSIGPTI 453 (485)
T ss_pred HHHHHHHHHHcCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCe--EEEEEEEehHHHHHhhCCCCCEEEECCCC
Confidence 0001355553 4688999999999999998873 5678999999999987666 234488876
Q ss_pred CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 020658 281 DSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 316 (323)
Q Consensus 281 ~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~ 316 (323)
..+|++||+++++++.+.++++..++.++.
T Consensus 454 ------~~~HspdE~v~I~s~~~~~~~l~~~l~~~~ 483 (485)
T PRK15026 454 ------TGPHSPDEQVHIESVGHYWTLLTELLKEIP 483 (485)
T ss_pred ------CCCCCCCcEEEhHHHHHHHHHHHHHHHhhh
Confidence 458999999999999888888888888773
No 61
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=1e-33 Score=269.68 Aligned_cols=286 Identities=16% Similarity=0.170 Sum_probs=222.5
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCC-----Cc-cHHHHH--
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEER-----GT-GAKDMI-- 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~-----g~-G~~~~~-- 72 (323)
.|.|+||. +|+.+|+ .++++.|.+++.|++++.+++++|.++..++||. +. |++.+.
T Consensus 258 SHlDTV~~------------gG~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~ 322 (591)
T PRK13799 258 SHYDTVRN------------GGKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGD 322 (591)
T ss_pred ccccccCC------------CCccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCC
Confidence 37787754 5566666 7899999999999999999999999999999997 22 565554
Q ss_pred ------H----cCC---------------C-------CCcceeeEeccCCC---CCcc-EEEeecCcceeeeeEEEEEEE
Q 020658 73 ------Q----EGV---------------L-------ENVEAIFGLHLVHK---YPTG-VVASRPGDFLAGCGSFKAKIS 116 (323)
Q Consensus 73 ------~----~~~---------------~-------~~~d~~~~~~~~~~---~~~g-~~~~~~g~~~~g~~~~~i~~~ 116 (323)
+ +|. . .++++.|-+|.+.+ +..+ .+. ..++++|..+++|+++
T Consensus 323 ~~~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~ig--vV~g~~G~~~~~Itv~ 400 (591)
T PRK13799 323 FNMELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLG--IVTSIAGSARYICEFI 400 (591)
T ss_pred ChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcEE--EEeeeccceEEEEEEE
Confidence 1 122 0 13445666666554 1111 122 2345679999999999
Q ss_pred eCCCccCC-CC-CCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcC-CccccccCceEEEEEEeccChhHHHHH
Q 020658 117 GKGGHAAI-PQ-HCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGG-SSYNMIPDSATVAGTFRAFNKKRFNAL 193 (323)
Q Consensus 117 G~~~Hss~-p~-~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg-~~~n~iP~~~~~~~~~R~~p~~~~~~~ 193 (323)
|+++|+|. |. .+.||+..+++++..++++..+. +....+++++.|+++ .+.|+||++|++.+|+|+.|.++.+.+
T Consensus 401 GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l 478 (591)
T PRK13799 401 GMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAA 478 (591)
T ss_pred EECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHH
Confidence 99999996 53 47899999999999998875432 122357788888753 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceE
Q 020658 194 RERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSF 273 (323)
Q Consensus 194 ~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~ 273 (323)
.++|++.+++.++..++++++++. ...+++.+++++++.+++++++. |.++. ...+++++|+++|.+..|..+
T Consensus 479 ~~~i~~~i~~ia~~~g~~~ei~~~----~~~~~~~~d~~lv~~~~~a~~~~-G~~~~--~~~sgag~Da~~~a~~~p~am 551 (591)
T PRK13799 479 VADILAEIAAIAARRGIEYKAELA----MKAAAAPCAPELMKQLEAATDAA-GVPLF--ELASGAGHDAMKIAEIMDQAM 551 (591)
T ss_pred HHHHHHHHHHHHHHhCCeEEEEEE----ecCCCcCCCHHHHHHHHHHHHHc-CCCce--ecCcchHHHHHHHHhhCCEEE
Confidence 999999999998888888877664 23456778899999999998874 87763 457889999999999887766
Q ss_pred EEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 020658 274 LLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 274 ~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
.|++.++. ..+|++||+++++++..++++|..++..+.+
T Consensus 552 if~~~g~~-----g~sHsp~E~v~~edL~~g~~vl~~~l~~l~~ 590 (591)
T PRK13799 552 LFTRCGNA-----GISHNPLESMTADDMELSADAFLDFLNNFAE 590 (591)
T ss_pred EEEecCCC-----CCCCCccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 65544331 3589999999999999999999999998864
No 62
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=1.4e-33 Score=269.09 Aligned_cols=285 Identities=12% Similarity=0.107 Sum_probs=220.6
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcchHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCC-----c-cHHH----
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGHDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERG-----T-GAKD---- 70 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g-----~-G~~~---- 70 (323)
+|+|+||.+ |+.+ .++|+++.|.+++.|++.+..++++|.+++.++||.+ . |++.
T Consensus 258 sHlDTV~~g------------G~~D---G~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~ 322 (591)
T PRK13590 258 SHYDTVRNG------------GKYD---GRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIGD 322 (591)
T ss_pred cccccCCCC------------CCcc---cHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhCC
Confidence 488888663 3332 3488999999999999999999999999999999973 1 5553
Q ss_pred ----HHH---------------cCC-----------CCCcceeeEeccCCCC---Ccc-EEEeecCcceeeeeEEEEEEE
Q 020658 71 ----MIQ---------------EGV-----------LENVEAIFGLHLVHKY---PTG-VVASRPGDFLAGCGSFKAKIS 116 (323)
Q Consensus 71 ----~~~---------------~~~-----------~~~~d~~~~~~~~~~~---~~g-~~~~~~g~~~~g~~~~~i~~~ 116 (323)
+++ .|+ ..++.+.|-+|.+++. ..| .+. ..++++|..+++|+++
T Consensus 323 ~~~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~~~g--vV~~~~G~~~~~v~v~ 400 (591)
T PRK13590 323 FDPAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDLPLG--IVTSINGSVRYVGEMI 400 (591)
T ss_pred ChHHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCceE--EEeeeeccEEEEEEEE
Confidence 222 111 0123456667766541 111 122 2245679999999999
Q ss_pred eCCCccCC-CCC-CCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEc-CCccccccCceEEEEEEeccChhHHHHH
Q 020658 117 GKGGHAAI-PQH-CIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMING-GSSYNMIPDSATVAGTFRAFNKKRFNAL 193 (323)
Q Consensus 117 G~~~Hss~-p~~-g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~g-g~~~n~iP~~~~~~~~~R~~p~~~~~~~ 193 (323)
|+++|+|. |.. +.||+..+++++..+++.... ....+++++.+.+ |.+.|+||++|++++|+|+.+.++.+.+
T Consensus 401 GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v 476 (591)
T PRK13590 401 GMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAM 476 (591)
T ss_pred eECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHH
Confidence 99999996 544 579999999999999876322 1234678888873 5689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHhhccceE
Q 020658 194 RERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLDEIPGSF 273 (323)
Q Consensus 194 ~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~~~p~~~ 273 (323)
.++|++.+++.+...+++++++.. ...++...|+++++.+.+++++. |.++. ...+++++|+++|.+.+|..+
T Consensus 477 ~~~i~~~i~~ia~~~g~~vei~~~----~~~~~~~~d~~lv~~~~~aa~~~-G~~~~--~~~sggg~Da~~~a~~~p~~m 549 (591)
T PRK13590 477 VADVLAELEAICERRGLRYTLEET----MRAAAAPSAPAWQQRWEAAVAAL-GLPLF--RMPSGAGHDAMKLHEIMPQAM 549 (591)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEe----ecCCCcCCCHHHHHHHHHHHHHc-CCCcc--cCCcchhHHHHHHHHHCCEEE
Confidence 999999999998888988888754 23556778999999999999885 87763 467899999999999888655
Q ss_pred EEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Q 020658 274 LLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLVN 318 (323)
Q Consensus 274 ~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~~ 318 (323)
+ +||+... ..+|++||+++++++..++++|..++..+++.
T Consensus 550 i-fgpg~~~----g~sH~p~E~v~~edL~~g~~vl~~ll~~l~~~ 589 (591)
T PRK13590 550 L-FVRGENA----GISHNPLESSTADDMQLAVQAFQHLLDQLAAE 589 (591)
T ss_pred E-EEeeCCC----CCCCCCccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 4 5554311 46899999999999999999999999998754
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.97 E-value=7e-30 Score=220.11 Aligned_cols=303 Identities=18% Similarity=0.171 Sum_probs=222.1
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMI 72 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~ 72 (323)
||+||+|+..+++|.++| +++|+|||||+ ||++++.+.|++++++.|..++.||.|+|...||.|+ |...++
T Consensus 98 gHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~~EgmEEsgS~~L~~l~ 177 (473)
T KOG2276|consen 98 GHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFVFEGMEESGSEGLDELI 177 (473)
T ss_pred eeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEEEEechhccCccHHHHH
Confidence 899999999999999888 67899999997 6999999999999999999999999999999999997 777766
Q ss_pred Hc---CCCCCcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEe--CCCccCCC-CCCCcHHHHHHHHHHHHHHhh
Q 020658 73 QE---GVLENVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISG--KGGHAAIP-QHCIDPILAVSSSVISLQNIV 146 (323)
Q Consensus 73 ~~---~~~~~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G--~~~Hss~p-~~g~nAi~~~~~~l~~l~~~~ 146 (323)
+. .+|.++|++.+-+.- ......-++..| .+|...+.|+|+| +-.||+.- ..-.-|+..|..++..|.+..
T Consensus 178 ~~~kD~~~~~vD~vciSdny-Wlg~kkPcltyG--lRG~~yf~i~v~g~~~DlHSGvfGG~~hE~m~dL~~~ms~Lv~~~ 254 (473)
T KOG2276|consen 178 EKEKDKFFKDVDFVCISDNY-WLGTKKPCLTYG--LRGVIYFQIEVEGPSKDLHSGVFGGVVHEAMNDLVLVMSSLVDIQ 254 (473)
T ss_pred HHHhhhhhccCCEEEeeCce-eccCCCcccccc--cccceeEEEEEeecccccccccccchhHHHHHHHHHHHHHhcCcC
Confidence 53 456678887754321 111112222223 3489999999999 67899964 222356666666666653221
Q ss_pred hcc----------------------------------------C--------CCCCCeeEEEEEEEc----CCccccccC
Q 020658 147 SRE----------------------------------------I--------DPLDSQVVSVAMING----GSSYNMIPD 174 (323)
Q Consensus 147 ~~~----------------------------------------~--------~~~~~~~~~v~~i~g----g~~~n~iP~ 174 (323)
.+. + +....+++.+..|.| ..+..+||.
T Consensus 255 ~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihgIeGaFs~pG~kTVIP~ 334 (473)
T KOG2276|consen 255 GRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHGIEGAFSGPGAKTVIPA 334 (473)
T ss_pred CcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceecccceeeCCCceEEeeh
Confidence 000 0 001234566666664 347789999
Q ss_pred ceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCe--EEEEeeccCCCCCCCc-ccCHHHHHHHHHHHHHHhCCcccc
Q 020658 175 SATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCS--AEVDFSGREHPTLPPT-MNDVRIYQHVRRVTAEILGEENVK 251 (323)
Q Consensus 175 ~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~g~~~~~ 251 (323)
++...|.+|+.|.++++.+.+.+.+.+++.....+.+ +++.... ...+.+ ..+++-+.++++|++.++|.+|-
T Consensus 335 kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~~---~~~~Wv~d~~~~~y~a~krA~~~v~gvePd- 410 (473)
T KOG2276|consen 335 KVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMGH---AGAPWVSDPDDPHYLALKRAIETVYGVEPD- 410 (473)
T ss_pred hheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeecC---CCCceecCCCchhHHHHHHHHHHhhCCCCC-
Confidence 9999999999999999999999999999988776543 3443332 222322 44788999999999999999883
Q ss_pred cCCCCCcCCcHHHHHh-hc--cceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHh
Q 020658 252 LAPIFTGSEDFAFFLD-EI--PGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYLV 317 (323)
Q Consensus 252 ~~~~~~g~tD~~~~~~-~~--p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~~ 317 (323)
....+|+-.....-+ .+ +.+...+|... .++|+.||++++.++..++++++.++.++.+
T Consensus 411 -~~ReGgSIPvt~tfQ~~~~~~V~llP~G~~d------D~aHsqNEkl~i~N~~~G~k~l~ay~~el~~ 472 (473)
T KOG2276|consen 411 -FTREGGSIPVTLTFQDITGKSVLLLPYGASD------DGAHSQNEKLNITNYVEGTKVLAAYISELAQ 472 (473)
T ss_pred -ccccCCccceehHHHHHhCCCeEEecccccc------cchhhhcccccHHHHhhhHHHHHHHHHHHhc
Confidence 456666766555443 33 33443345444 5799999999999999999999999988754
No 64
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.90 E-value=4.1e-24 Score=176.50 Aligned_cols=172 Identities=26% Similarity=0.342 Sum_probs=131.7
Q ss_pred CCCCccccccCCCCCccc----CCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc--cHHHH
Q 020658 1 MPNGSASLQELVEWEHKS----KIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT--GAKDM 71 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~----~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~--G~~~~ 71 (323)
+|+|||| . .++|.++| .++|++||||+ |++++++++|++.|++.+.+++++|.|+|+++||+|+ |++.+
T Consensus 4 ~H~Dtv~-~-~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~l 81 (189)
T PF01546_consen 4 AHMDTVP-G-PEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKHL 81 (189)
T ss_dssp EES-BCS-T-GGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHHH
T ss_pred ccccccC-C-cCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhhh
Confidence 6999999 4 55787665 67899999996 7999999999999999889999999999999999996 99999
Q ss_pred HHcCCCC--CcceeeEeccCCCCCccEEEeecCcceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhcc
Q 020658 72 IQEGVLE--NVEAIFGLHLVHKYPTGVVASRPGDFLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSRE 149 (323)
Q Consensus 72 ~~~~~~~--~~d~~~~~~~~~~~~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~ 149 (323)
++++... ++|+++..++... +...
T Consensus 82 ~~~~~~~~~~~~~~~~~e~~~~---------------~~~~--------------------------------------- 107 (189)
T PF01546_consen 82 LEEGAFFGLHPDYVIIGEPTGK---------------GGVG--------------------------------------- 107 (189)
T ss_dssp HHHCEEEEEEESEEEECECETT---------------SEEE---------------------------------------
T ss_pred hhhccccccccccccccccccc---------------cccc---------------------------------------
Confidence 9985221 2444443321100 0000
Q ss_pred CCCCCCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCccc
Q 020658 150 IDPLDSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMN 229 (323)
Q Consensus 150 ~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 229 (323)
...
T Consensus 108 -----------------------------------------------------------------------------~~~ 110 (189)
T PF01546_consen 108 -----------------------------------------------------------------------------SDN 110 (189)
T ss_dssp -----------------------------------------------------------------------------HCT
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 346
Q ss_pred CHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh--hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHH
Q 020658 230 DVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD--EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVI 307 (323)
Q Consensus 230 ~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~--~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~ 307 (323)
++++++.+++++++.++.+. .+..+++++|++++.. .....+.++|+.. ..+|++||+++++++.+++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tD~~~~~~~~~~~~~~i~~G~~~------~~~H~~~E~i~~~~l~~~~~~ 182 (189)
T PF01546_consen 111 DPPLVQALQAAAQEVGGEPP--EPVASGGGTDAGFLAEVKGLGIPAIGFGPGG------SNAHTPDEYIDIEDLVKGAKI 182 (189)
T ss_dssp CHHHHHHHHHHHHHTTSSEE--EEEEESSSSTHHHHHCHHHTTEEEEEEESCE------ESTTSTT-EEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhccc--cccceeccccchhhhhhhccccceeeeCCCC------CCCCCCCcEecHHHHHHHHHH
Confidence 77899999999999855233 3677999999999995 3333334577764 579999999999999999999
Q ss_pred HHHHHH
Q 020658 308 HAAFAH 313 (323)
Q Consensus 308 ~~~~~~ 313 (323)
|+.++.
T Consensus 183 ~~~~l~ 188 (189)
T PF01546_consen 183 YAALLE 188 (189)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999886
No 65
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.87 E-value=4.5e-21 Score=172.21 Aligned_cols=265 Identities=17% Similarity=0.223 Sum_probs=212.5
Q ss_pred eecCcchHHHHHHHHHHHHHHhcc-cCCCCeEEEEEecCCCCCc-cHHHHHHcCCCCCcceeeEeccCCCCCccEEEeec
Q 020658 24 MHACGHDAHVAMLLGAAKILQEMR-ETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVHKYPTGVVASRP 101 (323)
Q Consensus 24 ~~g~G~kg~~a~~l~a~~~l~~~~-~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~ 101 (323)
+-|.++|++++.++.++..+++.. ..++++|.+.|+++||.|+ |+..+.-. .| .+++.+.++ +.+.|.+.+..
T Consensus 140 LLgaD~kAGia~i~~al~~~~~~~~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a-~f-~a~~ay~iD---Gg~~g~i~~ea 214 (414)
T COG2195 140 LLGADDKAGIAEIMTALSVLREKHPEIPHGGIRGGFSPDEEIGGRGAANKDVA-RF-LADFAYTLD---GGPVGEIPREA 214 (414)
T ss_pred ccCCcchhHHHHHHHHHHHHhhcCccccccCeEEEecchHHhhhhhhhhccHH-hh-hcceeEecC---CCccCeeeeec
Confidence 567777899999999999999763 3568999999999999995 87766544 22 457777764 44567776542
Q ss_pred CcceeeeeEEEEEEEeCCCccCC-CCCCCcHHHHHHHHHHHHHHhhhccCCCCCCeeEEEEEEEcCCccccccCceEEEE
Q 020658 102 GDFLAGCGSFKAKISGKGGHAAI-PQHCIDPILAVSSSVISLQNIVSREIDPLDSQVVSVAMINGGSSYNMIPDSATVAG 180 (323)
Q Consensus 102 g~~~~g~~~~~i~~~G~~~Hss~-p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~v~~i~gg~~~n~iP~~~~~~~ 180 (323)
.+...+++++.|+.+|++. +....||+..+.++...+.... . ...++.+.+..+++...|.|.+++.+..
T Consensus 215 ----~~~~~~~~~~~g~~~h~~~a~~~~i~a~~~a~e~~~~~~~~~---~--~e~t~~~~Gv~~~~~~~~~V~~~s~~~~ 285 (414)
T COG2195 215 ----FNAAAVRATIVGPNVHPGSAKGKMINALLLAAEFILELPLEE---V--PELTEGPEGVYHLGDSTNSVEETSLNLA 285 (414)
T ss_pred ----cchheeeeeeeccCcCccchHHHHhhHHHhhhhhhhcCCccc---c--cccccccceEEeccccccchhhhhhhhh
Confidence 2566799999999999996 6667899998888888765321 1 1246677888889999999999999999
Q ss_pred EEeccChhHHHHHHHHHHHHHHHHHHHcC--CeEEEEeeccCCCCCCCc--ccCHHHHHHHHHHHHHHhCCcccccCCCC
Q 020658 181 TFRAFNKKRFNALRERIEEIIKGQAAVHR--CSAEVDFSGREHPTLPPT--MNDVRIYQHVRRVTAEILGEENVKLAPIF 256 (323)
Q Consensus 181 ~~R~~p~~~~~~~~~~i~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~g~~~~~~~~~~ 256 (323)
.+|...........+.+++.+++.++.++ ..++++... .||.+ ..++.+++.++++++++ +.+|. ...+
T Consensus 286 ~iR~~d~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~Yp~~~~~~~~~iv~~a~~a~~~l-~~~p~--v~~i 358 (414)
T COG2195 286 IIRDFDNLLFRARKDSMKDVVEEMAASLGKLAGAELEVKD----SYPGWKIKPDSPLVDLAKKAYKEL-GIKPK--VKPI 358 (414)
T ss_pred hhhhcchhHHHHhHHHHHHHHHHHHHHhhhccceEEEEec----cccCcCCCCCchHHHHHHHHHHHh-CCCce--EEEe
Confidence 99999999999999999999999999888 666666653 34433 45778999999999999 66664 5789
Q ss_pred CcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 020658 257 TGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGAVIHAAFAHSYL 316 (323)
Q Consensus 257 ~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~~~~~~~~~~~~ 316 (323)
.|++|++.+.. ++|+..+++|| . .+.|+++|+++++++.++++++..++..+-
T Consensus 359 ~gGtd~~~is~~g~p~~~i~~Gp-~------~n~Hs~~E~v~I~s~ek~~~~l~~l~~~~~ 412 (414)
T COG2195 359 HGGTDGGVLSFKGLPTPNISTGP-G------ENPHSPDEFVSIESMEKAVQVLVELLKLAA 412 (414)
T ss_pred ecccchhhhhccCCCCceEeccc-c------cCCCCccceeehHHHHHHHHHHHHHHHHhh
Confidence 99999999887 58888888997 3 679999999999999999999998887653
No 66
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.81 E-value=5.1e-19 Score=133.10 Aligned_cols=104 Identities=23% Similarity=0.314 Sum_probs=94.4
Q ss_pred ceeeeeEEEEEEEeCCCccCCCCCCCcHHHHHHHHHHHHHHhhhccC-----CCCCCeeEEEEEEEcCCccccccCceEE
Q 020658 104 FLAGCGSFKAKISGKGGHAAIPQHCIDPILAVSSSVISLQNIVSREI-----DPLDSQVVSVAMINGGSSYNMIPDSATV 178 (323)
Q Consensus 104 ~~~g~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~-----~~~~~~~~~v~~i~gg~~~n~iP~~~~~ 178 (323)
+++|..+++|+++|+++|+|.|+.++||+..|++++..|++...+.. ......+++++.++||...|+||++|++
T Consensus 2 g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~ 81 (111)
T PF07687_consen 2 GHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATL 81 (111)
T ss_dssp EEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEE
T ss_pred cCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEE
Confidence 46799999999999999999999999999999999999998754332 4456789999999999999999999999
Q ss_pred EEEEeccChhHHHHHHHHHHHHHHHHHHH
Q 020658 179 AGTFRAFNKKRFNALRERIEEIIKGQAAV 207 (323)
Q Consensus 179 ~~~~R~~p~~~~~~~~~~i~~~~~~~~~~ 207 (323)
.+++|+.|.++.++++++|++.+++.+..
T Consensus 82 ~~~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 82 TVDIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp EEEEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 99999999999999999999999987654
No 67
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.39 E-value=3.2e-12 Score=112.59 Aligned_cols=200 Identities=15% Similarity=0.162 Sum_probs=128.4
Q ss_pred CCCCccccccC---CCCCccc----------------------CCCCceecCc---chHHHHHHHHHHHHHHhcccCCCC
Q 020658 1 MPNGSASLQEL---VEWEHKS----------------------KIDGKMHACG---HDAHVAMLLGAAKILQEMRETLKG 52 (323)
Q Consensus 1 ~~~D~vP~~~~---~~w~~~~----------------------~~~g~~~g~G---~kg~~a~~l~a~~~l~~~~~~~~~ 52 (323)
||.|||.+.+= .+..|+| ..+++|+||| ||+|+|+.|++++.+.+. ....|
T Consensus 85 gH~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~G 163 (553)
T COG4187 85 GHFDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQG 163 (553)
T ss_pred eccceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCC
Confidence 79999998552 2334555 1235899999 489999999999999987 56899
Q ss_pred eEEEEEecCCCCCc-cHHHHHHc--CCC--CCcce--eeEeccCCCC---CccEEEeecCcceeeeeEEEEEEEeCCCcc
Q 020658 53 TVVLIFQPAEERGT-GAKDMIQE--GVL--ENVEA--IFGLHLVHKY---PTGVVASRPGDFLAGCGSFKAKISGKGGHA 122 (323)
Q Consensus 53 ~i~~~~~~~EE~g~-G~~~~~~~--~~~--~~~d~--~~~~~~~~~~---~~g~~~~~~g~~~~g~~~~~i~~~G~~~Hs 122 (323)
||.|+.++|||.-+ |++..+.. +.. .++++ ++..+..... ..+... ..|++ |..---.-+.|...|.
T Consensus 164 NlLf~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryv-YtGti--GKLLp~f~vvG~etHv 240 (553)
T COG4187 164 NLLFMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYV-YTGTI--GKLLPFFFVVGCETHV 240 (553)
T ss_pred cEEEEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEE-Eeccc--hhhcceeEEEeecccc
Confidence 99999999999875 87665532 111 13444 3333322211 112222 22433 6666667789999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHhh---hccCCCCCCeeEEEEEEEcCCcccc-ccCceEEEEEEeccChhHHHHHHHHHH
Q 020658 123 AIPQHCIDPILAVSSSVISLQNIV---SREIDPLDSQVVSVAMINGGSSYNM-IPDSATVAGTFRAFNKKRFNALRERIE 198 (323)
Q Consensus 123 s~p~~g~nAi~~~~~~l~~l~~~~---~~~~~~~~~~~~~v~~i~gg~~~n~-iP~~~~~~~~~R~~p~~~~~~~~~~i~ 198 (323)
+.|..|+||-..++++++.|+... ++.......+-.++-.-.=-.+.|| .|.++.+.|++=+. +.+.+++.++++
T Consensus 241 G~~f~Gvnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~L~qkDlKe~Y~VqTp~~a~~~fN~l~h-~~ta~~~~d~l~ 319 (553)
T COG4187 241 GYPFEGVNANFMASEITRRLELNADLADRVDGEITPPPSCLEQKDLKESYNVQTPERAWLYFNWLYH-SRTAKELFDRLK 319 (553)
T ss_pred CCcccCCCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHhhhhhhhhhhccccCcchhhhhheehhh-cCCHHHHHHHHH
Confidence 999999999999999999996432 2222111111111111111245666 68999999998665 455566666655
Q ss_pred HHHHHHH
Q 020658 199 EIIKGQA 205 (323)
Q Consensus 199 ~~~~~~~ 205 (323)
+.+++.+
T Consensus 320 ~~a~~A~ 326 (553)
T COG4187 320 EEAETAA 326 (553)
T ss_pred HHHHHHH
Confidence 5554443
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=98.75 E-value=1.5e-07 Score=84.29 Aligned_cols=49 Identities=33% Similarity=0.349 Sum_probs=44.0
Q ss_pred CCCCceecCc--chHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCcc
Q 020658 19 KIDGKMHACG--HDAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGTG 67 (323)
Q Consensus 19 ~~~g~~~g~G--~kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~G 67 (323)
..+|++|||+ +|+++++++.+++.|++.+.+++.+|+++|+++||+|.|
T Consensus 172 ~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~g 222 (343)
T TIGR03106 172 LANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSG 222 (343)
T ss_pred ecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCcc
Confidence 3678999988 579999999999999988777899999999999999976
No 69
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=98.55 E-value=4.5e-07 Score=80.32 Aligned_cols=69 Identities=17% Similarity=0.260 Sum_probs=54.6
Q ss_pred CCCCccccccCCCCCcccCCCCceecCcc---hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHc
Q 020658 1 MPNGSASLQELVEWEHKSKIDGKMHACGH---DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQE 74 (323)
Q Consensus 1 ~~~D~vP~~~~~~w~~~~~~~g~~~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~ 74 (323)
+|+|+|+......|++. .+-++++|+ +++++++|.+++.|++. +++.+|.|+++++||.|. |+++++++
T Consensus 116 AH~DTV~p~~~~~~~~~---~~g~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~~EE~Gl~GS~~~~~~ 188 (346)
T PRK10199 116 AHLDTYAPQSDADVDAN---LGGLTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVATSGEEEGKLGAENLLKR 188 (346)
T ss_pred EEcCcCCCCCCCccccC---CCCcccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEECCcccCcHHHHHHHHh
Confidence 69999975443455554 222666665 69999999999999865 467899999999999996 99999986
No 70
>PRK09961 exoaminopeptidase; Provisional
Probab=98.48 E-value=3.3e-06 Score=75.86 Aligned_cols=77 Identities=16% Similarity=0.072 Sum_probs=60.7
Q ss_pred cCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh---hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHH
Q 020658 229 NDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGA 305 (323)
Q Consensus 229 ~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~ 305 (323)
.++.+++.+++++++. +++.+. ....+++||++.+.. ++|++.+ |++. ..+|+++|+++++++..++
T Consensus 254 ~~~~l~~~l~~~A~~~-~Ip~Q~-~~~~ggGTDa~~~~~~~~Giptv~i--g~p~------ry~Hs~~E~v~~~D~~~~~ 323 (344)
T PRK09961 254 APPKLTAWIETVAAEI-GIPLQA-DMFSNGGTDGGAVHLTGTGVPTVVM--GPAT------RHGHCAASIADCRDILQMI 323 (344)
T ss_pred CCHHHHHHHHHHHHHc-CCCcEE-EecCCCcchHHHHHHhCCCCCEEEe--chhh------hcccChhheEEHHHHHHHH
Confidence 5788999999999987 776542 134557899997765 4888764 4433 4699999999999999999
Q ss_pred HHHHHHHHHH
Q 020658 306 VIHAAFAHSY 315 (323)
Q Consensus 306 ~~~~~~~~~~ 315 (323)
+++..++..+
T Consensus 324 ~Ll~~~i~~l 333 (344)
T PRK09961 324 QLLSALIQRL 333 (344)
T ss_pred HHHHHHHHHc
Confidence 9999999665
No 71
>PRK09864 putative peptidase; Provisional
Probab=98.15 E-value=6.8e-05 Score=67.29 Aligned_cols=77 Identities=14% Similarity=0.024 Sum_probs=59.1
Q ss_pred cCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh---hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHH
Q 020658 229 NDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGA 305 (323)
Q Consensus 229 ~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~ 305 (323)
.++.+.+.+.+++++. +++.+. .....|+||+..+.. ++|+....++. .+.|+|.|-++++++..++
T Consensus 262 ~~~~l~~~l~~~A~~~-~Ip~Q~-~~~~~ggTDa~~i~~~~~Gvpt~~isiP~--------RY~Hs~~e~~~~~D~e~~~ 331 (356)
T PRK09864 262 PNQKLVAALKSCAAHN-DLPLQF-STMKTGATDGGRYNVMGGGRPVVALCLPT--------RYLHANSGMISKADYDALL 331 (356)
T ss_pred CCHHHHHHHHHHHHHc-CCCceE-EEcCCCCchHHHHHHhCCCCcEEEEeecc--------CcCCCcceEeEHHHHHHHH
Confidence 4566777777777776 777642 234457999988764 48987765654 5699999999999999999
Q ss_pred HHHHHHHHHH
Q 020658 306 VIHAAFAHSY 315 (323)
Q Consensus 306 ~~~~~~~~~~ 315 (323)
+++..++.++
T Consensus 332 ~Ll~~~~~~l 341 (356)
T PRK09864 332 TLIRDFLTTL 341 (356)
T ss_pred HHHHHHHHhc
Confidence 9999999776
No 72
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=97.54 E-value=0.00014 Score=59.18 Aligned_cols=57 Identities=32% Similarity=0.580 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHc--CCCCCcceeeEec
Q 020658 31 AHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQE--GVLENVEAIFGLH 87 (323)
Q Consensus 31 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~--~~~~~~d~~~~~~ 87 (323)
.+++++|..++.|++.+.+++++|+|+|..+||.|. |+.++++. ....++.++|.++
T Consensus 29 sGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~~~~~~~~~~~~~inlD 88 (179)
T PF04389_consen 29 SGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVEHDHEELDNIAAVINLD 88 (179)
T ss_dssp HHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHHHHHCHHHHEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHHhhhcccccceeEEecc
Confidence 799999999999999888899999999999999996 99999963 1122355666665
No 73
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=97.40 E-value=0.00026 Score=63.61 Aligned_cols=78 Identities=12% Similarity=0.047 Sum_probs=64.4
Q ss_pred ccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHH--HHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHH
Q 020658 228 MNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAF--FLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIG 304 (323)
Q Consensus 228 ~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~--~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~ 304 (323)
..++.+.+.+.+++++. +++.+ ...+.|+||++. +.. ++|++...+|. ..+|++.|.++++++..+
T Consensus 262 i~~~~l~~~l~~~A~~~-~I~~Q--~~~~~gGtDa~~~~~~~~Gvpt~~i~ip~--------Ry~Hs~~e~i~~~D~~~~ 330 (350)
T TIGR03107 262 IMLPRMKDFLLTTAEEA-GIKYQ--YYVAKGGTDAGAAHLKNSGVPSTTIGVCA--------RYIHSHQTLYSIDDFLAA 330 (350)
T ss_pred CCCHHHHHHHHHHHHHc-CCCcE--EecCCCCchHHHHHHhCCCCcEEEEccCc--------ccccChhheeeHHHHHHH
Confidence 45788999999999998 99875 456678999994 443 69998765655 569999999999999999
Q ss_pred HHHHHHHHHHHH
Q 020658 305 AVIHAAFAHSYL 316 (323)
Q Consensus 305 ~~~~~~~~~~~~ 316 (323)
++++..++.++-
T Consensus 331 ~~Ll~~~i~~l~ 342 (350)
T TIGR03107 331 QAFLQAIVKKLD 342 (350)
T ss_pred HHHHHHHHHhcC
Confidence 999999988763
No 74
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=96.76 E-value=0.003 Score=56.49 Aligned_cols=79 Identities=11% Similarity=0.019 Sum_probs=63.5
Q ss_pred cCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh---hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHHH
Q 020658 229 NDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIGA 305 (323)
Q Consensus 229 ~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~~ 305 (323)
.++.+.+.+.+.+++. +++.+. .....|+||++.+.. ++|+...+++. ...|++.|.++++++..+.
T Consensus 267 ~~~~l~~~L~~~A~~~-~Ip~Q~-~v~~~ggTDA~a~~~~g~gvpta~Igip~--------ry~Hs~~e~~~~~D~~~~~ 336 (355)
T COG1363 267 YHPKLRKFLLELAEKN-NIPYQV-DVSPGGGTDAGAAHLTGGGVPTALIGIPT--------RYIHSPVEVAHLDDLEATV 336 (355)
T ss_pred CCHHHHHHHHHHHHHc-CCCeEE-EecCCCCccHHHHHHcCCCCceEEEeccc--------ccccCcceeecHHHHHHHH
Confidence 3778999999999988 888763 233448999999886 38887644443 5699999999999999999
Q ss_pred HHHHHHHHHHHh
Q 020658 306 VIHAAFAHSYLV 317 (323)
Q Consensus 306 ~~~~~~~~~~~~ 317 (323)
+++..++.++..
T Consensus 337 ~Ll~~~i~~~~~ 348 (355)
T COG1363 337 KLLVAYLESLDR 348 (355)
T ss_pred HHHHHHHHhcch
Confidence 999999988753
No 75
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=96.74 E-value=0.0039 Score=54.78 Aligned_cols=64 Identities=27% Similarity=0.304 Sum_probs=49.8
Q ss_pred CCCCceecCcch--HHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHcCCCCCcceeeEec
Q 020658 19 KIDGKMHACGHD--AHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLH 87 (323)
Q Consensus 19 ~~~g~~~g~G~k--g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~ 87 (323)
..++++.|+..+ .++++++.+++.|++.+ ++.+++++|++.||.|. |+.....+ -++|.++.++
T Consensus 123 ~~~~~i~gkalDdR~g~~~lle~l~~l~~~~--~~~~v~~v~tvqEEvG~rGA~~aa~~---i~PD~ai~vD 189 (292)
T PF05343_consen 123 LGNGRIVGKALDDRAGCAVLLELLRELKEKE--LDVDVYFVFTVQEEVGLRGAKTAAFR---IKPDIAIAVD 189 (292)
T ss_dssp ETTTEEEETTHHHHHHHHHHHHHHHHHTTSS---SSEEEEEEESSCTTTSHHHHHHHHH---H-CSEEEEEE
T ss_pred eCCCEEEEEeCCchhHHHHHHHHHHHHhhcC--CCceEEEEEEeeeeecCcceeecccc---cCCCEEEEEe
Confidence 356678888874 89999999999999853 45999999999999996 88887765 1457776553
No 76
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=96.48 E-value=0.0094 Score=53.72 Aligned_cols=65 Identities=20% Similarity=0.183 Sum_probs=51.3
Q ss_pred CCceecCcc--hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHcCCCCCcceeeEeccCC
Q 020658 21 DGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLVH 90 (323)
Q Consensus 21 ~g~~~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~~ 90 (323)
++++.|+.. +.++++++.+++.|++. +++.+|+++|++.||+|. |++..... -++|.++.++..+
T Consensus 169 ~~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~---i~pD~aI~vDv~~ 236 (350)
T TIGR03107 169 GKNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK---FNPDIFFAVDCSP 236 (350)
T ss_pred CCEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh---CCCCEEEEEecCC
Confidence 356777665 58999999999999865 578899999999999995 88876554 2568888887544
No 77
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=96.27 E-value=0.0095 Score=53.33 Aligned_cols=65 Identities=25% Similarity=0.248 Sum_probs=49.9
Q ss_pred CCCceecCcc--hHHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHcCCCCCcceeeEeccC
Q 020658 20 IDGKMHACGH--DAHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVLENVEAIFGLHLV 89 (323)
Q Consensus 20 ~~g~~~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~~~~d~~~~~~~~ 89 (323)
.++++=++-. +.++++++.+++.| + +.+++.+++++|++.||.|- |++..... -++|.+|.++..
T Consensus 170 ~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~---i~pd~aiavd~~ 237 (355)
T COG1363 170 ANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR---IKPDIAIAVDVT 237 (355)
T ss_pred cCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc---cCCCEEEEEecc
Confidence 3465555444 69999999999999 4 67899999999999999994 77776554 246777776643
No 78
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.83 E-value=0.036 Score=54.47 Aligned_cols=56 Identities=32% Similarity=0.526 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHcCCC-CCcceeeEec
Q 020658 32 HVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGVL-ENVEAIFGLH 87 (323)
Q Consensus 32 ~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~~-~~~d~~~~~~ 87 (323)
+++.+|++++.+.+....+.++|+|+|...||.+- |+-.++.|... ..+.+++.++
T Consensus 167 ~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L~gsH~FItQH~w~~~~ka~INLe 224 (834)
T KOG2194|consen 167 GVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGLLGSHAFITQHPWSKNIKAVINLE 224 (834)
T ss_pred HHHHHHHHHHHhhcCCCcccccEEEEecCcccchhhhcccceecChhhhhhheEEecc
Confidence 68899999999999888889999999999999985 88778775433 3466676654
No 79
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=94.71 E-value=0.023 Score=49.91 Aligned_cols=70 Identities=17% Similarity=0.212 Sum_probs=55.2
Q ss_pred ccCHHHHHHHHHHHHHHhCCcccccCCCCCcCCcHHHHHh---hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHH
Q 020658 228 MNDVRIYQHVRRVTAEILGEENVKLAPIFTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIG 304 (323)
Q Consensus 228 ~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~ 304 (323)
..++.+.+.+.+++++. +++.+. .....++||++.+.. ++|+....++. .+.|++.|.++++++..+
T Consensus 220 i~~~~l~~~l~~~A~~~-~Ip~Q~-~~~~~ggTDa~~~~~~~~Gi~t~~i~iP~--------ry~Hs~~e~~~~~Di~~~ 289 (292)
T PF05343_consen 220 IPNPKLVDKLREIAEEN-GIPYQR-EVFSGGGTDAGAIQLSGGGIPTAVISIPC--------RYMHSPVEVIDLDDIEAT 289 (292)
T ss_dssp ESHHHHHHHHHHHHHHT-T--EEE-EEESSSSSTHHHHHTSTTSSEEEEEEEEE--------BSTTSTTEEEEHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCCeEE-EecCCcccHHHHHHHcCCCCCEEEEeccc--------ccCCCcceEEEHHHHHHH
Confidence 34678999999999998 988763 266889999999986 47887666665 469999999999999988
Q ss_pred HHH
Q 020658 305 AVI 307 (323)
Q Consensus 305 ~~~ 307 (323)
+++
T Consensus 290 ~~L 292 (292)
T PF05343_consen 290 IDL 292 (292)
T ss_dssp HHH
T ss_pred hhC
Confidence 764
No 80
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=93.92 E-value=0.33 Score=46.04 Aligned_cols=44 Identities=14% Similarity=0.135 Sum_probs=39.5
Q ss_pred CCeeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHH
Q 020658 154 DSQVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKG 203 (323)
Q Consensus 154 ~~~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~ 203 (323)
...++|++.+.++ |++|.+.+++|++|.++++++.++|++.++.
T Consensus 336 ~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~~ 379 (477)
T TIGR01893 336 VESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIESIAKL 379 (477)
T ss_pred EEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHHHhhh
Confidence 3568899998876 7899999999999999999999999999884
No 81
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=93.05 E-value=0.2 Score=46.82 Aligned_cols=44 Identities=32% Similarity=0.348 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHcCC
Q 020658 31 AHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQEGV 76 (323)
Q Consensus 31 g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~~~ 76 (323)
.+++++|..++.|+... ++.+|.|++...||.|. |+.+++++..
T Consensus 231 sGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 231 SGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred HHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCC
Confidence 69999999999999864 89999999999999996 9999998754
No 82
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=91.82 E-value=0.64 Score=39.43 Aligned_cols=43 Identities=23% Similarity=0.367 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHhc---ccCCCCeEEEEEecCCCCCc-cHHHHHH
Q 020658 31 AHVAMLLGAAKILQEM---RETLKGTVVLIFQPAEERGT-GAKDMIQ 73 (323)
Q Consensus 31 g~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~~EE~g~-G~~~~~~ 73 (323)
.+++++|+++++|.+. ...++++|.|.|..+|-.|- |++.++.
T Consensus 27 sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~R~vy 73 (234)
T PF05450_consen 27 SGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSSRFVY 73 (234)
T ss_pred HHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchHHHHH
Confidence 7899999999999875 23578999999999999995 8887764
No 83
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=91.13 E-value=0.48 Score=44.54 Aligned_cols=82 Identities=10% Similarity=-0.020 Sum_probs=61.7
Q ss_pred cCHHHHHHHHHHHHHHhCCccccc--CCCCCcCCcHHHHHh---hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHH
Q 020658 229 NDVRIYQHVRRVTAEILGEENVKL--APIFTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 303 (323)
Q Consensus 229 ~~~~~~~~~~~a~~~~~g~~~~~~--~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~ 303 (323)
.|+.+...+++.+++. |++.+.. ....++++|.+.+.. ++|++- +|... -.+|++.|-+..+++..
T Consensus 373 td~~~~a~i~~la~~~-~Ip~Q~~~~~~d~~~GsTig~i~~s~~Gi~tvD--iGiP~------l~MHS~rE~~~~~D~~~ 443 (465)
T PTZ00371 373 TNGVTASLLKAIAKKA-NIPIQEFVVKNDSPCGSTIGPILSSNLGIRTVD--IGIPQ------LAMHSIREMCGVVDIYY 443 (465)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCcchHHHHHHhCCCCcEEE--echhh------cccccHHHHccHHHHHH
Confidence 4788999999999987 8876531 223455888777664 478765 44433 56999999999999999
Q ss_pred HHHHHHHHHHHHHhcc
Q 020658 304 GAVIHAAFAHSYLVNS 319 (323)
Q Consensus 304 ~~~~~~~~~~~~~~~~ 319 (323)
.++++..++..+.+-.
T Consensus 444 ~~~l~~af~~~~~~~~ 459 (465)
T PTZ00371 444 LVKLIKAFFTNYSKVD 459 (465)
T ss_pred HHHHHHHHHHhhhhhc
Confidence 9999999988765433
No 84
>PRK02256 putative aminopeptidase 1; Provisional
Probab=90.19 E-value=0.38 Score=45.09 Aligned_cols=75 Identities=12% Similarity=0.020 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHHHhCCcccccCC----CCCcCCcHHHHHh-hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHHH
Q 020658 230 DVRIYQHVRRVTAEILGEENVKLAP----IFTGSEDFAFFLD-EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPIG 304 (323)
Q Consensus 230 ~~~~~~~~~~a~~~~~g~~~~~~~~----~~~g~tD~~~~~~-~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~~ 304 (323)
+..++..+.+.+++. +++.+.... .-.|+||...+++ ++|++-.+++. -.+|++.|-+..+++..+
T Consensus 381 ~~~~~~~i~~iA~~~-~Ip~Q~~~~~r~d~~~GgTig~~~s~~Gi~tvdiGiP~--------l~MHS~rE~~~~~D~~~~ 451 (462)
T PRK02256 381 NAEFVAEVRNLFNKN-NVVWQTAELGKVDQGGGGTIAKFLANYGMEVIDCGVAL--------LSMHSPFEIASKADIYET 451 (462)
T ss_pred CHHHHHHHHHHHHHc-CCCEEEEEeecCCCCCcChHHHHHcCCCCcEEEechhh--------hccccHHHHhhHHHHHHH
Confidence 677888999999887 887642111 1368999766764 58886644433 569999999999999999
Q ss_pred HHHHHHHHH
Q 020658 305 AVIHAAFAH 313 (323)
Q Consensus 305 ~~~~~~~~~ 313 (323)
++++..++.
T Consensus 452 ~~ll~~f~~ 460 (462)
T PRK02256 452 YKAYKAFLE 460 (462)
T ss_pred HHHHHHHHh
Confidence 999888764
No 85
>PRK02813 putative aminopeptidase 2; Provisional
Probab=87.19 E-value=0.99 Score=42.00 Aligned_cols=76 Identities=11% Similarity=-0.024 Sum_probs=56.8
Q ss_pred cCHHHHHHHHHHHHHHhCCccccc--CCCCCcCCcHHHHHh---hccceEEEecccCCCCCCCCCCCCCCCCCCCCchHH
Q 020658 229 NDVRIYQHVRRVTAEILGEENVKL--APIFTGSEDFAFFLD---EIPGSFLLLGMLNDSVGSLYPLHSPYFTIDEHVLPI 303 (323)
Q Consensus 229 ~~~~~~~~~~~a~~~~~g~~~~~~--~~~~~g~tD~~~~~~---~~p~~~~~~G~~~~~~~~~~~~H~~dE~v~~~~~~~ 303 (323)
.+......+++.+++. +++.+.. ....++++|.+.+.. ++|++-. |... -.+|++-|-++.+++..
T Consensus 346 t~~~~~a~~~~ia~~~-~Ip~Q~~v~~~d~~gGstig~i~~s~~Gi~tvdi--GiP~------l~MHS~~E~~~~~D~~~ 416 (428)
T PRK02813 346 TDAESAAVFKLLCEKA-GVPYQEFVNRSDMPCGSTIGPITAARLGIRTVDV--GAPM------LAMHSARELAGVKDHAY 416 (428)
T ss_pred cCHHHHHHHHHHHHHc-CCCEEEEEecCCCCCccHHHHHHHhCCCCcEEEe--Chhh------cccccHHHHccHHHHHH
Confidence 4677889999999987 8876531 122357888888765 4787654 4433 56999999999999999
Q ss_pred HHHHHHHHHH
Q 020658 304 GAVIHAAFAH 313 (323)
Q Consensus 304 ~~~~~~~~~~ 313 (323)
+++++..++.
T Consensus 417 ~~~l~~~f~~ 426 (428)
T PRK02813 417 LIKALTAFFS 426 (428)
T ss_pred HHHHHHHHhc
Confidence 9999887653
No 86
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=76.82 E-value=6.4 Score=38.98 Aligned_cols=44 Identities=27% Similarity=0.295 Sum_probs=33.6
Q ss_pred HHHHHHHHHH---HHHHhcccCCCCeEEEEEecCCCCCc-cHHHHHHc
Q 020658 31 AHVAMLLGAA---KILQEMRETLKGTVVLIFQPAEERGT-GAKDMIQE 74 (323)
Q Consensus 31 g~~a~~l~a~---~~l~~~~~~~~~~i~~~~~~~EE~g~-G~~~~~~~ 74 (323)
.|++.++... ..+++.+.+|.++|+|+...+||.|. |+-.+++.
T Consensus 373 sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~sWdAeEfGliGStE~~E~ 420 (702)
T KOG2195|consen 373 SGTALLLEIARALSKLKKRGWRPRRTILFASWDAEEFGLLGSTEWAEE 420 (702)
T ss_pred ccHHHHHHHHHHHHHHHHcCCCccceEEEEEccchhccccccHHHHHH
Confidence 4555554444 34556789999999999999999997 88777774
No 87
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=75.32 E-value=32 Score=32.80 Aligned_cols=75 Identities=7% Similarity=0.006 Sum_probs=48.3
Q ss_pred eeEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCC-cccCHHHH
Q 020658 156 QVVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPP-TMNDVRIY 234 (323)
Q Consensus 156 ~~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~ 234 (323)
+++|++.++- --+.|++.+++|+++..+.+++.++|+++++ ..|..+++.... ..+.+++ .+.-..+.
T Consensus 344 ~S~Nlg~v~~------~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~~----~~g~~~~~~~~~-p~w~~~~ds~lv~~l~ 412 (485)
T PRK15026 344 TSLNVGVVTM------TDNNVEIHCLIRSLIDSGKDYVVSMLDSLGK----LAGAKTEAKGAY-PGWQPDANSPVMHLVR 412 (485)
T ss_pred eeeEEEEEEE------eCCEEEEEEEecCCCchHHHHHHHHHHHHHH----HcCcEEEEeCCC-CCCCCCCCCHHHHHHH
Confidence 5667766653 2367999999999999999999999988854 346666554322 1122333 33344455
Q ss_pred HHHHHHH
Q 020658 235 QHVRRVT 241 (323)
Q Consensus 235 ~~~~~a~ 241 (323)
+..++.+
T Consensus 413 ~~y~e~~ 419 (485)
T PRK15026 413 ETYQRLF 419 (485)
T ss_pred HHHHHHH
Confidence 5555554
No 88
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=73.83 E-value=20 Score=24.75 Aligned_cols=57 Identities=5% Similarity=0.011 Sum_probs=36.5
Q ss_pred ceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHH
Q 020658 175 SATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQH 236 (323)
Q Consensus 175 ~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
+.+.+|-+|.+++.+..++.++|.+.++-. +-.+.+.+.......+.+. +|..+-.+
T Consensus 8 ~f~~tIaIrvp~~~~y~~L~~ki~~kLkl~----~e~i~LsYkde~s~~~v~l-~d~dle~a 64 (80)
T cd06406 8 HFKYTVAIQVARGLSYATLLQKISSKLELP----AEHITLSYKSEASGEDVIL-SDTNMEDV 64 (80)
T ss_pred EEEEEEEEEcCCCCCHHHHHHHHHHHhCCC----chhcEEEeccCCCCCccCc-ChHHHHHH
Confidence 345588999999999999999999988642 2234444543333445455 44444333
No 89
>PRK02256 putative aminopeptidase 1; Provisional
Probab=68.29 E-value=8.9 Score=36.12 Aligned_cols=42 Identities=26% Similarity=0.271 Sum_probs=28.9
Q ss_pred CCceecCcch--HHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc
Q 020658 21 DGKMHACGHD--AHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT 66 (323)
Q Consensus 21 ~g~~~g~G~k--g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~ 66 (323)
++.|.|...+ .++.+.+.+++.+. .+...++++++..||+|+
T Consensus 251 ~efI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs 294 (462)
T PRK02256 251 RSLIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGS 294 (462)
T ss_pred cceeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCC
Confidence 4566666654 55666666655443 356789999999999995
No 90
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=59.83 E-value=53 Score=27.97 Aligned_cols=60 Identities=23% Similarity=0.356 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHH--hcccCCCCeEEEEEecCC--CC---------Cc--cHHHHHHcCCCCCcceeeEeccC
Q 020658 30 DAHVAMLLGAAKILQ--EMRETLKGTVVLIFQPAE--ER---------GT--GAKDMIQEGVLENVEAIFGLHLV 89 (323)
Q Consensus 30 kg~~a~~l~a~~~l~--~~~~~~~~~i~~~~~~~E--E~---------g~--G~~~~~~~~~~~~~d~~~~~~~~ 89 (323)
+|.++++..|++.+. +.|..+++++++.---+- -+ ++ +...+.+...-..+|++++++..
T Consensus 57 DGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~PvpFM~sPv~~~~~n~~EV~p~mdAILSiDTT 131 (276)
T PF06675_consen 57 DGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHDPVPFMGSPVDMATMNRHEVDPEMDAILSIDTT 131 (276)
T ss_pred chHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCCCcccccCccCHHHHHHhhcCcccceEEEEecC
Confidence 588888888877554 668889999888643332 11 23 57777777666678999988753
No 91
>cd06408 PB1_NoxR The PB1 domain is present in the Epichloe festucae NoxR protein (NADPH oxidase regulator), a key regulator of NADPH oxidase isoform, NoxA. NoxA is essential for growth control of the fungal endophyte in plant tissue in the process of symbiotic interaction between a fungi and its plant host. The Epichloe festucae p67(phox)-like regulator, NoxR, dispensable in culture but essential in plants for the symbiotic interaction. Plants infected with a noxR deletion mutant show severe stunting and premature senescence, whereas hyphae in the meristematic tissues show increased branching leading to increased fungal colonization of pseudostem and leaf blade tissue. The PB1 domain is a modular domain mediating specific protein-protein interactions which a play role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is
Probab=56.82 E-value=66 Score=22.56 Aligned_cols=57 Identities=4% Similarity=0.033 Sum_probs=39.4
Q ss_pred EEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHH
Q 020658 179 AGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTA 242 (323)
Q Consensus 179 ~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 242 (323)
...+|.+|....+++.++|++.+.- .-.+.+.|... ..+....++..|-.+++.+-+
T Consensus 13 v~~i~v~~~i~f~dL~~kIrdkf~~-----~~~~~iKykDE--GD~iti~sq~DLd~Ai~~a~~ 69 (86)
T cd06408 13 TRYIMIGPDTGFADFEDKIRDKFGF-----KRRLKIKMKDD--GDMITMGDQDDLDMAIDTARS 69 (86)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHhCC-----CCceEEEEEcC--CCCccccCHHHHHHHHHHHHH
Confidence 3567888999999999999999852 34666666643 445555666667666665553
No 92
>PRK06156 hypothetical protein; Provisional
Probab=51.17 E-value=1.3e+02 Score=28.96 Aligned_cols=29 Identities=21% Similarity=0.351 Sum_probs=22.6
Q ss_pred eEEEEEEEcCCccccccCceEEEEEEeccCh
Q 020658 157 VVSVAMINGGSSYNMIPDSATVAGTFRAFNK 187 (323)
Q Consensus 157 ~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~ 187 (323)
+.++..++||...|+||+.|.+. ++..+.
T Consensus 240 ~~~l~~~~gG~~~n~ip~~a~~~--~~~~~~ 268 (520)
T PRK06156 240 GAEIVAMTGGAFANQIPQTAVAT--LSGGDP 268 (520)
T ss_pred ceeEEEEEcCCcCCCCCCccEEE--EecCCH
Confidence 35677889999999999999988 444443
No 93
>PRK02813 putative aminopeptidase 2; Provisional
Probab=47.60 E-value=28 Score=32.57 Aligned_cols=41 Identities=22% Similarity=0.078 Sum_probs=26.6
Q ss_pred CCceecCcch--HHHHHHHHHHHHHHhcccCCCCeEEEEEecCCCCCc
Q 020658 21 DGKMHACGHD--AHVAMLLGAAKILQEMRETLKGTVVLIFQPAEERGT 66 (323)
Q Consensus 21 ~g~~~g~G~k--g~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~ 66 (323)
++.+.+.+.+ .++.+.+.|+..+.+ ...++++++..||+|+
T Consensus 225 ~e~i~s~~lDnr~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs 267 (428)
T PRK02813 225 GEFISSGRLDNLSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGS 267 (428)
T ss_pred CCEEEEecchhHHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCC
Confidence 4466666665 444445555444321 6789999999999983
No 94
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=45.97 E-value=36 Score=32.17 Aligned_cols=46 Identities=13% Similarity=0.038 Sum_probs=25.7
Q ss_pred CCceecCcch--HHHHHHHHHHHHHHhcccCCCCeEEEEE-ecCCCCCc
Q 020658 21 DGKMHACGHD--AHVAMLLGAAKILQEMRETLKGTVVLIF-QPAEERGT 66 (323)
Q Consensus 21 ~g~~~g~G~k--g~~a~~l~a~~~l~~~~~~~~~~i~~~~-~~~EE~g~ 66 (323)
++.+.|.+.+ .++.+.+.|+..+.........++.+++ ...||+|+
T Consensus 242 ~e~i~s~rlDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs 290 (465)
T PTZ00371 242 EEFISSPRLDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGS 290 (465)
T ss_pred CCeEEEecchhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCC
Confidence 4566666665 5555556665544321002234455555 88899995
No 95
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=42.78 E-value=97 Score=21.28 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=28.0
Q ss_pred ceEEEEEEeccChhHHHHHHHHHHHHHHHHHH
Q 020658 175 SATVAGTFRAFNKKRFNALRERIEEIIKGQAA 206 (323)
Q Consensus 175 ~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~ 206 (323)
+|+.+|-+|.+++.+..++.+.|.+.++..++
T Consensus 4 h~~fTVai~v~~g~~y~~L~~~ls~kL~l~~~ 35 (78)
T cd06411 4 QCAFTVALRAPRGADVSSLRALLSQALPQQAQ 35 (78)
T ss_pred EEEEEEEEEccCCCCHHHHHHHHHHHhcCChh
Confidence 58899999999999999999999999876543
No 96
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=39.06 E-value=70 Score=29.71 Aligned_cols=62 Identities=19% Similarity=0.309 Sum_probs=43.4
Q ss_pred cCcch-HHHHHHHHHHHHHHhcc----cCCCCeEEEEEecCCCCC-ccHHHHHHc---CCCCCcceeeEec
Q 020658 26 ACGHD-AHVAMLLGAAKILQEMR----ETLKGTVVLIFQPAEERG-TGAKDMIQE---GVLENVEAIFGLH 87 (323)
Q Consensus 26 g~G~k-g~~a~~l~a~~~l~~~~----~~~~~~i~~~~~~~EE~g-~G~~~~~~~---~~~~~~d~~~~~~ 87 (323)
|.+++ +|+++.|..++.+.+.- -..+.||.|+.+.+--.- .|.+++++- .+-+.+|+++|++
T Consensus 234 gADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLd 304 (555)
T KOG2526|consen 234 GADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLD 304 (555)
T ss_pred CCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhh
Confidence 45555 47888998888887642 235789999999877654 388888773 1223588999875
No 97
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=34.68 E-value=67 Score=28.11 Aligned_cols=30 Identities=23% Similarity=0.319 Sum_probs=21.8
Q ss_pred eEEEEEEEcCCccccccCceEEEEEEeccCh
Q 020658 157 VVSVAMINGGSSYNMIPDSATVAGTFRAFNK 187 (323)
Q Consensus 157 ~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~ 187 (323)
.+.++.++=|.... +|-.|.+.+|+|+.|+
T Consensus 161 ~l~v~i~SFGfK~G-iP~dAD~VfDvRfLpN 190 (284)
T PF03668_consen 161 RLTVTIQSFGFKYG-IPPDADLVFDVRFLPN 190 (284)
T ss_pred ceEEEEEEeccccC-CCCCCCEEEEcCcCCC
Confidence 45555555555544 8899999999999874
No 98
>PRK13562 acetolactate synthase 1 regulatory subunit; Provisional
Probab=33.76 E-value=1.7e+02 Score=20.49 Aligned_cols=44 Identities=9% Similarity=0.135 Sum_probs=30.4
Q ss_pred eEEEEEEEcCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHH
Q 020658 157 VVSVAMINGGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIK 202 (323)
Q Consensus 157 ~~~v~~i~gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~ 202 (323)
-+|+.++..|..- .|+-..+++-+-.......+++.+++++.++
T Consensus 27 g~NI~SLtvg~Te--~~~iSRmtivv~~~d~~~ieqI~kQL~Klid 70 (84)
T PRK13562 27 QYNIDTLHVTHSE--QPGISNMEIQVDIQDDTSLHILIKKLKQQIN 70 (84)
T ss_pred CcCeeeEEecccC--CCCceEEEEEEeCCCHHHHHHHHHHHhCCcc
Confidence 3677777776543 4777888888765566667777777776653
No 99
>PF03755 YicC_N: YicC-like family, N-terminal region ; InterPro: IPR013527 Proteins in this entry are homologues of YicC (P23839 from SWISSPROT) from Escherichia coli. Although it is relatively poorly characterised YicC has been shown to be important for cells in the stationary phase, and essential for growth at high temperatures []. This domain is found at the N-terminal region of these proteins.
Probab=28.77 E-value=2.9e+02 Score=21.71 Aligned_cols=64 Identities=8% Similarity=0.106 Sum_probs=37.3
Q ss_pred EEEEEEeccChhHHHHHHHHHHHHHHHHHHHcC-CeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHH
Q 020658 177 TVAGTFRAFNKKRFNALRERIEEIIKGQAAVHR-CSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEI 244 (323)
Q Consensus 177 ~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 244 (323)
.+.+++|+|.. ...+...|++.+.+... .| +.+.+.+... .........|.++++...++++++
T Consensus 30 ~Ldi~~rlP~~--l~~lE~~ir~~i~~~l~-RGkV~v~i~~~~~-~~~~~~~~in~~l~~~y~~~l~~l 94 (159)
T PF03755_consen 30 FLDISIRLPRE--LSSLEPEIRKLIRKKLS-RGKVEVSIRVERS-SESAVELRINEELAKAYYEALKEL 94 (159)
T ss_pred ceeeEEeCCHH--HHHHHHHHHHHHHHhcc-cceEEEEEEEEEC-cccCCCcccCHHHHHHHHHHHHHH
Confidence 35667777644 45677788888876432 23 2333333321 112334556888888888877766
No 100
>PF09650 PHA_gran_rgn: Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn); InterPro: IPR013433 Proteins in this entry are encoded by genes involved in either polyhydroxyalkanoic acid (PHA) biosynthesis or utilisation, including proteins at found at the surface of PHA granules. These proteins have so far been predominantly found in the Pseudomonadales, Xanthomonadales, and Vibrionales, all of which belong to the Gammaproteobacteria.
Probab=25.44 E-value=1.7e+02 Score=20.52 Aligned_cols=34 Identities=15% Similarity=0.036 Sum_probs=26.6
Q ss_pred EEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 020658 181 TFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEV 214 (323)
Q Consensus 181 ~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~ 214 (323)
+++-+-....++..+.+++.++++.+.++..++.
T Consensus 2 ~I~r~H~Lg~~eAr~~~~~~~~~l~~~~~~~~~W 35 (87)
T PF09650_consen 2 HIERPHSLGREEARRRAEELAEKLAEEYGVECTW 35 (87)
T ss_pred eEEecCCCCHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 4555566778899999999999998888876543
No 101
>TIGR03687 pupylate_cterm ubiquitin-like protein Pup. Members of this protein family are Pup, a small protein whose ligation to target proteins steers them toward degradation. This protein family occurs in a number of bacteria, especially Actinobacteria such as Mycobacterium tuberculosis, that possess an archeal-type proteasome. All members of this protein family known during model construction end with the C-terminal motif [FY][VI]QKGG[QE]. Ligation is thought to occur between the C-terminal COOH of Pup and an epsilon-amino group of a Lys on the target protein. The N-terminal half of this protein is poorly conserved and not represented in the seed alignment.
Probab=24.67 E-value=1.4e+02 Score=16.62 Aligned_cols=20 Identities=15% Similarity=0.363 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 020658 188 KRFNALRERIEEIIKGQAAV 207 (323)
Q Consensus 188 ~~~~~~~~~i~~~~~~~~~~ 207 (323)
...+++++.|..+++..|+.
T Consensus 3 ~~~D~lLDeId~vLe~NAe~ 22 (33)
T TIGR03687 3 EGVDDLLDEIDGVLESNAEE 22 (33)
T ss_pred chHHHHHHHHHHHHHHhHHH
Confidence 46788889999998876654
No 102
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=24.47 E-value=1.4e+02 Score=28.15 Aligned_cols=24 Identities=29% Similarity=0.512 Sum_probs=20.1
Q ss_pred EEEEcCCccccccCceEEEEEEec
Q 020658 161 AMINGGSSYNMIPDSATVAGTFRA 184 (323)
Q Consensus 161 ~~i~gg~~~n~iP~~~~~~~~~R~ 184 (323)
..+.+|...|.+|..|++.+-.+.
T Consensus 194 ~~~~~Ge~tn~~p~~a~~~v~~~~ 217 (447)
T TIGR01887 194 ESFKAGEAFNMVPDHATAVISGKE 217 (447)
T ss_pred EEEeCCCcCCccCcceEEEEeccc
Confidence 346788899999999999997764
No 103
>cd04870 ACT_PSP_1 CT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). The ACT_PSP_1 CD includes the first of the two ACT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). PSPs belong to the L-2-haloacid dehalogenase-like protein superfamily. PSP is involved in serine metabolism; serine is synthesized from phosphoglycerate through sequential reactions catalyzed by 3-phosphoglycerate dehydrogenase (SerA), 3-phosphoserine aminotransferase (SerC), and SerB. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=23.28 E-value=2.3e+02 Score=18.71 Aligned_cols=37 Identities=5% Similarity=-0.116 Sum_probs=25.5
Q ss_pred CceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 020658 174 DSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEV 214 (323)
Q Consensus 174 ~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~ 214 (323)
+...+.+.++.++..+.+++.+.+++..+ ..+.++++
T Consensus 37 ~~f~~~~~v~~p~~~~~~~l~~~l~~l~~----~l~l~i~~ 73 (75)
T cd04870 37 GRLSLGILVQIPDSADSEALLKDLLFKAH----ELGLQVRF 73 (75)
T ss_pred CeeEEEEEEEcCCCCCHHHHHHHHHHHHH----HcCceEEE
Confidence 45777778888776677777777777765 45666655
No 104
>cd06407 PB1_NLP A PB1 domain is present in NIN like proteins (NLP), a key enzyme in a process of establishment of symbiosis betweeen legumes and nitrogen fixing bacteria (Rhizobium). The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes like osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-inte
Probab=22.74 E-value=2.6e+02 Score=19.25 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=39.1
Q ss_pred EEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEEEeeccCCCCCCCcccCHHHHHHHHHHHHH
Q 020658 179 AGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAE 243 (323)
Q Consensus 179 ~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 243 (323)
.+-+|++|..+.+++.++|.+.+.- .....+.+.|.... ........+..|-+++. .++.
T Consensus 11 ~~r~~l~~~~~~~~L~~~i~~r~~~---~~~~~f~LkY~Dde-gd~v~ltsd~DL~eai~-i~~~ 70 (82)
T cd06407 11 KIRFRLPPSWGFTELKQEIAKRFKL---DDMSAFDLKYLDDD-EEWVLLTCDADLEECID-VYRS 70 (82)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHhCC---CCCCeeEEEEECCC-CCeEEeecHHHHHHHHH-HHHH
Confidence 4568889999999999999888752 11135667776422 33334456777777775 4443
No 105
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=22.38 E-value=5.5e+02 Score=24.21 Aligned_cols=23 Identities=22% Similarity=0.265 Sum_probs=19.2
Q ss_pred EEEEEcCCccccccCceEEEEEE
Q 020658 160 VAMINGGSSYNMIPDSATVAGTF 182 (323)
Q Consensus 160 v~~i~gg~~~n~iP~~~~~~~~~ 182 (323)
+..++||...|+||+.|.+.+..
T Consensus 204 ~~~~~~g~~~~~v~~~~~~~i~~ 226 (466)
T TIGR01886 204 LDSFKAGLAENMVPQVARAVISG 226 (466)
T ss_pred EEEEEcCCcCCccCCeeEEEEec
Confidence 44688999999999999988743
No 106
>PRK04439 S-adenosylmethionine synthetase; Provisional
Probab=22.28 E-value=4.7e+02 Score=24.17 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=42.0
Q ss_pred CCcHHHHHHHHHHHHHHhhhccCCC-C-CCeeEEEEEEE-cCCccccccCceEEEEEEeccChhHHHHHHHHHHHHHHHH
Q 020658 128 CIDPILAVSSSVISLQNIVSREIDP-L-DSQVVSVAMIN-GGSSYNMIPDSATVAGTFRAFNKKRFNALRERIEEIIKGQ 204 (323)
Q Consensus 128 g~nAi~~~~~~l~~l~~~~~~~~~~-~-~~~~~~v~~i~-gg~~~n~iP~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~ 204 (323)
|.||+....++.+-|.+...+.... . +..-+.+-.++ =|...+ -|. .+.+.+...++...+++.+++++++++.
T Consensus 304 GKNPv~HVGKIYNvlA~~iA~~i~~~v~gv~ev~V~llSqIG~PId-~P~--~a~v~v~~~~g~~~~~~~~~v~~I~~~~ 380 (399)
T PRK04439 304 GKNPVNHVGKIYNVLANRIAREIYEEVEGVKEVYVRLLSQIGKPID-EPL--VASIQVIPEDGVLISDVEKEVEEIVDEE 380 (399)
T ss_pred CCCCcccchHHHHHHHHHHHHHHHHhcCCceEEEEEEeccCCCcCC-CCe--EEEEEEecCCCCChHHHHHHHHHHHHHH
Confidence 7799999888888886543322111 1 11233443333 132222 244 4445555666677788888888887764
No 107
>cd04871 ACT_PSP_2 ACT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). The ACT_PSP_2 CD includes the second of the two ACT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). PSPs belong to the L-2-haloacid dehalogenase-like protein superfamily. PSP is involved in serine metabolism; serine is synthesized from phosphoglycerate through sequential reactions catalyzed by 3-phosphoglycerate dehydrogenase (SerA), 3-phosphoserine aminotransferase (SerC), and SerB. Members of this CD belong to the superfamily of ACT regulatory domains
Probab=21.27 E-value=2.6e+02 Score=19.19 Aligned_cols=37 Identities=19% Similarity=0.163 Sum_probs=25.3
Q ss_pred cCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 020658 173 PDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEV 214 (323)
Q Consensus 173 P~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~ 214 (323)
|....+.+++|.+| .+.+.+.+.+.+..+ ..|+++.+
T Consensus 46 ~~~~~~e~~v~~~~-~~~~~lr~~L~~la~----elgvDIav 82 (84)
T cd04871 46 SPKACVEFSVRGQP-ADLEALRAALLELAS----ELNVDIAF 82 (84)
T ss_pred CCcEEEEEEEeCCC-CCHHHHHHHHHHHhc----ccCceEEE
Confidence 45668999999766 677777777765544 45666554
No 108
>TIGR02159 PA_CoA_Oxy4 phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=20.72 E-value=4e+02 Score=20.74 Aligned_cols=65 Identities=20% Similarity=0.140 Sum_probs=34.4
Q ss_pred CceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeccCCCCCCCcccCHHHHHHHHHHHHHHhCCcc
Q 020658 174 DSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRC-SAEVDFSGREHPTLPPTMNDVRIYQHVRRVTAEILGEEN 249 (323)
Q Consensus 174 ~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~ 249 (323)
+.+.+++..-+.--...+.+.+.|++.+++ .|+ ++++++.. .|++.. ..+.+.-++.+++. |+-+
T Consensus 25 d~V~VtIt~Ty~gcpa~e~L~~~I~~aL~~----~Gv~~V~V~i~~-----~p~Wt~-d~it~~gr~~l~~~-giap 90 (146)
T TIGR02159 25 GGVVVKFTPTYSGCPALEVIRQDIRDAVRA----LGVEVVEVSTSL-----DPPWTT-DWITEDAREKLREY-GIAP 90 (146)
T ss_pred CEEEEEEEeCCCCCchHHHHHHHHHHHHHh----cCCCeEEEeEee-----CCCCCh-HHCCHHHHHHHHhc-CccC
Confidence 445555555444444556677777777764 243 34444432 234422 33555555666655 8765
No 109
>cd04869 ACT_GcvR_2 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. This CD includes the second of the two ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains. The glycine cleavage enzyme system in Escherichia coli provides one-carbon units for cellular methylation reactions. This enzyme system, encoded by the gcvTHP operon and lpd gene, catalyzes the cleavage of glycine into CO2 + NH3 and transfers a one-carbon unit to tetrahydrofolate, producing 5,10-methylenetetrahydrofolate. The gcvTHP operon is activated by the GcvA protein in response to glycine and repressed by a GcvA/GcvR interaction in the absence of glycine. It has been proposed that the co-activator glycine acts through a mechanism of de-repression by binding to GcvR and preventing GcvR from interacting with GcvA to block GcvA's activator function. Evidence also suggests that GcvR in
Probab=20.30 E-value=2.7e+02 Score=18.41 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=25.0
Q ss_pred cCceEEEEEEeccChhHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 020658 173 PDSATVAGTFRAFNKKRFNALRERIEEIIKGQAAVHRCSAEV 214 (323)
Q Consensus 173 P~~~~~~~~~R~~p~~~~~~~~~~i~~~~~~~~~~~g~~~~~ 214 (323)
++...+.+.+..++..+..++.+.++.+.+ ..+.++.+
T Consensus 42 ~~~~~~~~~v~~p~~~~~~~l~~~l~~l~~----~~~~~~~~ 79 (81)
T cd04869 42 TPLFKAQATLALPAGTDLDALREELEELCD----DLNVDISL 79 (81)
T ss_pred cceEEEEEEEecCCCCCHHHHHHHHHHHHH----HhcceEEe
Confidence 356777777887765567777777777655 34555544
Done!