Your job contains 1 sequence.
>020659
MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW
RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG
LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK
QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV
KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT
CVLTSGGELYTWGSNENGCLGIG
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020659
(323 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 1124 5.8e-114 1
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 399 3.9e-37 1
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 401 3.1e-35 1
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 349 6.3e-35 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 396 1.0e-34 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 393 1.8e-34 1
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 393 2.2e-34 1
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 393 2.2e-34 1
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 393 2.2e-34 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 374 2.8e-33 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 369 9.7e-33 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 366 2.0e-32 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 361 6.9e-32 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 361 7.0e-32 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 360 8.8e-32 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 360 8.9e-32 1
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 353 5.0e-31 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 351 8.1e-31 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 350 1.3e-30 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 349 1.3e-30 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 343 4.4e-30 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 346 4.5e-30 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 335 5.3e-30 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 343 5.8e-30 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 343 5.8e-30 1
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 342 7.4e-30 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 341 8.8e-30 1
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 341 9.0e-30 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 331 1.5e-29 1
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 338 2.0e-29 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 329 3.2e-29 1
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 336 3.4e-29 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 327 4.3e-29 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 332 8.5e-29 1
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 324 1.2e-28 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 322 1.6e-28 1
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 322 1.6e-28 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 327 2.9e-28 1
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 326 3.6e-28 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 323 3.7e-28 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 319 4.1e-28 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 318 4.4e-28 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 325 4.6e-28 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 325 4.7e-28 1
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 317 5.7e-28 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 316 4.1e-27 1
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 315 4.9e-27 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 323 5.9e-27 1
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 320 8.6e-27 1
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 320 8.7e-27 1
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 320 1.2e-26 1
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 320 1.2e-26 1
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 320 1.2e-26 1
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 312 1.2e-26 1
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 311 1.4e-26 1
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 319 1.5e-26 1
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 319 1.5e-26 1
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 318 2.0e-26 1
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 317 2.5e-26 1
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 317 2.5e-26 1
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 317 2.5e-26 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 291 1.1e-25 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 303 1.1e-25 1
RGD|1563497 - symbol:Sergef "secretion regulating guanine... 290 1.4e-25 1
MGI|MGI:1351630 - symbol:Sergef "secretion regulating gua... 291 2.2e-25 1
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 287 2.9e-25 1
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 298 3.6e-25 1
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 293 1.4e-24 1
ZFIN|ZDB-GENE-040426-2216 - symbol:rcc1 "regulator of chr... 280 1.8e-24 1
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 294 2.0e-24 1
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 289 3.4e-24 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 288 3.8e-24 1
UNIPROTKB|Q3MHW0 - symbol:SERGEF "Secretion-regulating gu... 278 6.7e-24 1
UNIPROTKB|F1S9B1 - symbol:SERGEF "Uncharacterized protein... 274 6.8e-24 1
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 273 8.7e-24 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 284 1.1e-23 1
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 266 1.3e-23 2
MGI|MGI:1913989 - symbol:Rcc1 "regulator of chromosome co... 271 2.2e-23 1
UNIPROTKB|Q9UGK8 - symbol:SERGEF "Secretion-regulating gu... 273 2.3e-23 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 281 2.3e-23 1
UNIPROTKB|A7Z018 - symbol:RCC1 "Uncharacterized protein" ... 271 2.3e-23 1
RGD|1592835 - symbol:Rcc1 "regulator of chromosome conden... 268 5.0e-23 1
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 277 6.0e-23 1
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 270 6.6e-23 1
UNIPROTKB|Q7ZZC8 - symbol:nek9 "Serine/threonine-protein ... 276 7.1e-23 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 276 7.7e-23 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 280 7.9e-23 1
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 276 8.1e-23 1
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 268 9.4e-23 1
UNIPROTKB|C9JW69 - symbol:RCC1 "Regulator of chromosome c... 263 1.0e-22 1
DICTYBASE|DDB_G0282633 - symbol:DDB_G0282633 "putative gu... 274 1.1e-22 1
UNIPROTKB|I3LT85 - symbol:RCC1 "Uncharacterized protein" ... 265 1.1e-22 1
UNIPROTKB|Q96I51 - symbol:WBSCR16 "Williams-Beuren syndro... 267 1.1e-22 1
UNIPROTKB|F1Q1C6 - symbol:WBSCR16 "Uncharacterized protei... 266 1.5e-22 1
UNIPROTKB|P18754 - symbol:RCC1 "Regulator of chromosome c... 263 1.9e-22 1
UNIPROTKB|E2QYP0 - symbol:NEK9 "Uncharacterized protein" ... 271 2.6e-22 1
UNIPROTKB|Q8TD19 - symbol:NEK9 "Serine/threonine-protein ... 270 3.3e-22 1
UNIPROTKB|Q74AS9 - symbol:GSU2272 "ATS1 domain repeat lip... 259 4.0e-22 1
TIGR_CMR|GSU_2272 - symbol:GSU_2272 "lipoprotein, putativ... 259 4.0e-22 1
UNIPROTKB|E1BIS5 - symbol:WBSCR16 "Uncharacterized protei... 262 4.1e-22 1
WARNING: Descriptions of 122 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 205/309 (66%), Positives = 253/309 (81%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L +D KLG +G+C RW+SS +RFAA+WG+GDYGRLGLG+L+S+W P VCSA HS
Sbjct: 25 LLKDSKLGP-IGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHS 83
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ A+ACGGAHTLFLTET V+ATGLND GQLG+S+ ++++PL +SGL K+++ IS GY
Sbjct: 84 ITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGY 143
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI + ALG E SVAV
Sbjct: 144 YHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAV 203
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV AAG LHSAC
Sbjct: 204 TDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSAC 263
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
DENG ++FG+++++KM F +A PS+IS++PY+EEV CGGYHTCV+T GGELYTW
Sbjct: 264 TDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTW 323
Query: 313 GSNENGCLG 321
GSNENGCLG
Sbjct: 324 GSNENGCLG 332
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 54/218 (24%), Positives = 91/218 (41%)
Query: 44 GNGDYGRL-GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G+G L G+ S + P + E + +A G H+ E G + G +
Sbjct: 221 GHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINK 280
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + + P IS + +++ G +H+ +T GELY WG N NG LG
Sbjct: 281 MGFG-GVRNATTPSIISEVPY-AEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYV 338
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS-GRL---GHGQESSIL 218
P+ + L + Q + G++ + A++ V +WG GGS G GH L
Sbjct: 339 SHSPVRVEGPFLESTVS-QVSCGWKHTAAISDNN-VFTWGWGGSHGTFSVDGHSSGGQ-L 395
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
G P ++ + V+ + GF H+A + E+
Sbjct: 396 GHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 48/167 (28%), Positives = 78/167 (46%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A ++G ++G G + + P + S E + +ACGG HT +T G +Y G N+
Sbjct: 270 AFMFGEKSINKMGFGGVRNATTPSIIS--EVPYAEEVACGGYHTCVVTRGGELYTWGSNE 327
Query: 100 FGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWG--------- 148
G LG +++ S P+R+ G L+ V Q+S G+ H++AI+ D ++ WG
Sbjct: 328 NGCLG-TDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAIS-DNNVFTWGWGGSHGTFS 385
Query: 149 ---KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+S GQLG G P V+ + + GF + AV
Sbjct: 386 VDGHSSGGQLGHGSDVDYARP--AMVDLGKNVRAVHISCGFNHTAAV 430
Score = 151 (58.2 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 50/158 (31%), Positives = 73/158 (46%)
Query: 173 CLSGIF--TKQAALGFEQSVAVTG-GGKVLS--WGAGGSGRLGHGQESSILGFLRSTSEY 227
C SG+ +K +G S V+ GK + WG+G GRLG LG L S++
Sbjct: 21 CTSGLLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLG-------LGNL--DSQW 71
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISK 286
TP + L + A G H+ + E RV+ G ++ + +HA P +S
Sbjct: 72 TPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSG 131
Query: 287 LPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + G YH+ +T GELY WG N +G LG+G
Sbjct: 132 LDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLG 169
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 49/182 (26%), Positives = 82/182 (45%)
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
MWG G+LGLG ++ P LS A G ++ +T +V + G
Sbjct: 53 MWGSGDYGRLGLGNLDSQWTP--AVCSALSDHSITAVACGGAHTLFLTETRRVFATGLND 110
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG S + E + L K++ + +AG+ HSA I +G +Y++G
Sbjct: 111 CGQLG---VSDVKSHAMDPLEVSG-LDKDILHI-----SAGYYHSAAITVDGELYMWGKN 161
Query: 266 AVDKM-LFQEGNHARR-PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ ++ L ++ R P+ + L + V G H+ +T GGE+ +WG +G LG
Sbjct: 162 SSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLG 221
Query: 322 IG 323
G
Sbjct: 222 HG 223
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 97/285 (34%), Positives = 141/285 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLGHG-NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 158 EDSLVP--QKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + L S + GG+ HT LTS G+LY WG N+ G +G+G
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 311
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 85/286 (29%), Positives = 141/286 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 152 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+++P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 211 DRLVP--ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 265
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 266 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQV--GVGNNLDQC 317
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + + P ++VV CG HT +T ++ WG NG LGIG
Sbjct: 318 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363
Score = 271 (100.5 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 77/252 (30%), Positives = 122/252 (48%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G +H++ L V + G + GQLG + P ++S L ++V ++ G H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 78
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + G E+Y WG G+LG G + P+P K L GI KQ A G +AVT
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA--LHGIRIKQIACGDSHCLAVT 136
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ EG+++K+ AAG H+A +
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 187
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYT 311
E+G +Y +G + + P ++ + V CG HT ++ G LYT
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247
Query: 312 WGSNENGCLGIG 323
+G ++ G LG G
Sbjct: 248 YGWSKYGQLGHG 259
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 70/246 (28%), Positives = 115/246 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG E P AFE +K +A G HT +TE G +Y G +G
Sbjct: 144 WGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + L P R++ E + ++ G+ H+ +++ G LY +G + GQLG G
Sbjct: 204 LGLGDRTD-RLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLE 262
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+IP K+E LS F Q + G+ ++A+T GK+ WG G++G G
Sbjct: 263 DHLIP--HKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN-------- 312
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ + +P ++ + KV + G+ H+ + E V+ +G ++ E P
Sbjct: 313 -NLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFP 371
Query: 282 SLISKL 287
+I L
Sbjct: 372 KIIEAL 377
Score = 238 (88.8 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 66/205 (32%), Positives = 97/205 (47%)
Query: 123 KEVVQISTGYHHSSAITVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++V+ IS G HS A+ + G++ WG+ +GQLG G A+ P PT++ L G
Sbjct: 15 RKVLIISAGASHSVAL-LSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDGHQIVS 71
Query: 182 AALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
G + +VA + G +V SWG G GRLGHG S + +TP IK L G+++
Sbjct: 72 VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALHGIRI 122
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
K A G H + G V +G ++ + + P I + V G
Sbjct: 123 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAE 182
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
HT +T G+LY WG G LG+G
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLG 207
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 401 (146.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 108/310 (34%), Positives = 164/310 (52%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
+C + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 4033 VCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTA 4151
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVL 199
DG+L+ +G G+LGLG + K +P +V L G Q A G +VAV T G V
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVW 4209
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ + L G+ +K A G S + ++G V
Sbjct: 4210 AFGDGDYGKLGLGN---------STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHV 4260
Query: 260 YIFGDRAVDKML-FQEG---NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
Y FG + D+++ EG NH RP + L + E++ G HT L+S G++Y WG
Sbjct: 4261 YTFG-QVSDRLIGLPEGRARNH-NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWG 4318
Query: 314 SNENGCLGIG 323
SN G LG+G
Sbjct: 4319 SNSEGQLGLG 4328
Score = 352 (129.0 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 100/289 (34%), Positives = 151/289 (52%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 319 (117.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 80/267 (29%), Positives = 137/267 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G +G + G
Sbjct: 4225 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPE-----G- 4276
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4277 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4335
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTS 305
P+LI+ L ++ G H+ T+
Sbjct: 4336 PTLITVLQGKNIRQISAGRCHSAAWTA 4362
Score = 278 (102.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 84/290 (28%), Positives = 133/290 (45%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
S S P L+K++ V + G H+ + ++GR V+ FG K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDT 599
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N +P +I L + +V G + LTS G++Y WG CLG G
Sbjct: 600 NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCG 647
Score = 263 (97.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 83/288 (28%), Positives = 129/288 (44%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + PV +F + + + CG T + G V A G +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPVAAPSFSQ--AQQVVCGQNCTFVIQANGTVLACGEGSYG 4057
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 4117 GNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN- 4173
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
+ P + LEG ++ A G H+ + +G V+ FGD K+
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNST 4225
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P + L ++V CG + LT G +YT+G + +G+
Sbjct: 4226 AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGL 4273
Score = 261 (96.9 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 77/270 (28%), Positives = 137/270 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+V P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 TNRVYK-PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
LR P+LI+EL ++ + G H + + VY +G+ ++ + +GN
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC--GQGNSTGP 705
Query: 279 -RRPSLISKLP-YS-EEVVCGGYHTCVLTS 305
+P +S L S +++ G H+ T+
Sbjct: 706 ITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735
Score = 258 (95.9 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 77/243 (31%), Positives = 120/243 (49%)
Query: 86 LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDGS 423
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
+ GK S G+LGLG + E I ++ G + ++A T G+V SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 484 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCL 320
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG L
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 321 GIG 323
G G
Sbjct: 595 GHG 597
Score = 208 (78.3 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 55/163 (33%), Positives = 78/163 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 199 (75.1 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 60/209 (28%), Positives = 99/209 (47%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 4029 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 4085
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--- 294
+ G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4086 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQ-GEEVVQMS 4140
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+T+ G+L+T+G+ + G LG+G
Sbjct: 4141 CGFKHSAVVTADGKLFTFGNGDYGRLGLG 4169
Score = 40 (19.1 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ G++L+ G+GG G +G S+ G ++ ++KE G
Sbjct: 2044 IVENGQILTHGSGGKG---YGLAST--GVTSGCYQWKFYIVKENRG 2084
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 349 (127.9 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 94/289 (32%), Positives = 147/289 (50%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182
Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNS-NGQLGLGK 159
LG + L P R+ ++ I+T H++AIT GELYMWG+ +G+LGLG
Sbjct: 183 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241
Query: 160 ----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGFF-TMALTKEGQLWNWGANSNYELGRGDN- 299
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
LG + P + LEGV++ A G HS + E G+V +G ++
Sbjct: 300 --LG------GWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 351
Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ + P+ I L + V GG + +T GGEL+ WG+ ++ LG+
Sbjct: 352 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGV 400
Score = 258 (95.9 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 72/210 (34%), Positives = 103/210 (49%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
+ IS G HS +T+DG+L++WGK G+LG G++ + +P L+ +F + +
Sbjct: 104 IGISCGLFHSG-LTIDGDLWIWGKGDGGRLGFGQENSVFVPN------LNPLFEEHSIRC 156
Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
ALG SVA+T G V +WG GG G LGH + T E PR + + K+
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGH----KVY-----TRELVPRRVDDSWDCKIS 207
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLF-------QEGNHARRPSLISKLPYS-EEV 293
A H+A I E+G +Y++G D L EG PS + L V
Sbjct: 208 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 267
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CGG+ T LT G+L+ WG+N N LG G
Sbjct: 268 SCGGFFTMALTKEGQLWNWGANSNYELGRG 297
Score = 186 (70.5 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 69/256 (26%), Positives = 115/256 (44%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGY--SLEPLRISGLKKEVVQ-ISTG 131
++CG H+ LT G ++ G D G+LG EN + +L PL ++ ++ I+ G
Sbjct: 106 ISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPL----FEEHSIRCIALG 160
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVEC-LSGIFTKQAALGFEQ 188
HS A+T G+++ WG G LG +++P + +C +S I T
Sbjct: 161 GLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGT-----H 215
Query: 189 SVAVTGGGKVLSWGAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+ A+T G++ WG G GRLG G G P +K L ++ GF
Sbjct: 216 TAAITESGELYMWGREEGDGRLGLGPGR---GPNEGGGLSVPSKVKALTVPVASVSCGGF 272
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTS 305
A E G+++ +G + ++ + P + L ++ CGGYH+ LT
Sbjct: 273 FTMALTKE-GQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE 331
Query: 306 GGELYTWGSNENGCLG 321
G++ +WG +G LG
Sbjct: 332 EGKVLSWGHGGHGQLG 347
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 56/205 (27%), Positives = 88/205 (42%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV---- 190
S +T+ +L+ WG+ ++GQLG G + ++ P P V L +F + Q+
Sbjct: 43 SDPVTL--QLFSWGRGASGQLGGGIEEIRMYPSP--VANL--LFRSDQSFSLAQTPGRID 96
Query: 191 AVTGGGKV-LSWGAGGSGRLGHGQ-------ESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A + ++ +S G SG G + LGF + S + P L E ++
Sbjct: 97 ADSSSFRIGISCGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRC 156
Query: 243 AAAGFLHSACIDENGRVYIFGDR---AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
A G LHS + G V+ +G A+ ++ RR S + G H
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISA-IATSGTH 215
Query: 300 TCVLTSGGELYTWGSNE-NGCLGIG 323
T +T GELY WG E +G LG+G
Sbjct: 216 TAAITESGELYMWGREEGDGRLGLG 240
Score = 45 (20.9 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 43 WGNGDYGRLGLGSLESRWRP 62
WG G G+LG G E R P
Sbjct: 53 WGRGASGQLGGGIEEIRMYP 72
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 396 (144.5 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 108/307 (35%), Positives = 160/307 (52%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
IC + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 4033 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4151
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL- 199
DG+L+ +G G+LGLG + K +P +V L G Q A G ++AV+ G ++
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4209
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ I L G+ +K A G S + ++G V
Sbjct: 4210 AFGDGDYGKLGLGN---------STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHV 4260
Query: 260 YIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
Y FG DR + + NH RP I L E+V G HT L S G++Y WGSN
Sbjct: 4261 YTFGQDRLIGLPEGRARNH-NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNS 4319
Query: 317 NGCLGIG 323
G LG+G
Sbjct: 4320 EGQLGLG 4326
Score = 353 (129.3 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 101/289 (34%), Positives = 151/289 (52%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 -ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 319 (117.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 80/267 (29%), Positives = 136/267 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTS 305
P+L++ L ++ G H+ T+
Sbjct: 4334 PTLVTGLQGKNVRQISAGRCHSAAWTA 4360
Score = 278 (102.9 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 84/290 (28%), Positives = 133/290 (45%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
S S P L+K++ V + G H+ + ++GR V+ FG K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDT 599
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N +P +I L + +V G + LTS G++Y WG CLG G
Sbjct: 600 NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCG 647
Score = 262 (97.3 bits), Expect = 7.0e-21, Sum P(2) = 7.0e-21
Identities = 76/270 (28%), Positives = 136/270 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+V P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 TNRVYK-PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
LR P+LI+EL ++ + G H + + VY +G+ ++ + +GN
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQC--GQGNSTGP 705
Query: 279 -RRPSLISKLP--YSEEVVCGGYHTCVLTS 305
+P +S L +++ G H+ T+
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 258 (95.9 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 77/243 (31%), Positives = 120/243 (49%)
Query: 86 LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDGS 423
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
+ GK S G+LGLG + E I ++ G + ++A T G+V SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 484 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCL 320
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG L
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 321 GIG 323
G G
Sbjct: 595 GHG 597
Score = 255 (94.8 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 82/281 (29%), Positives = 125/281 (44%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + P +F + + + CG T + G V A G +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 4117 GNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
+ P + LEG ++ A G H+ + +G V+ FGD K+
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
P I L ++V CG + LT G +YT+G +
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4266
Score = 208 (78.3 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 55/163 (33%), Positives = 78/163 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 201 (75.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 4085
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--- 294
+ G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4086 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQ-GEEVVQMS 4140
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Score = 39 (18.8 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
G++L+ G+GG G +G S+ G ++ ++KE G
Sbjct: 2048 GQILTHGSGGKG---YGLAST--GVTSGCYQWKFYIVKENRG 2084
Score = 38 (18.4 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 301 CVLTSGGELYTWGSNENG 318
C L G++ T GS G
Sbjct: 2042 CCLVENGQILTHGSGGKG 2059
Score = 38 (18.4 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 202 GAGGSGRLGHGQE 214
G G SGRL H Q+
Sbjct: 1696 GKGESGRLHHYQD 1708
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 393 (143.4 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 107/307 (34%), Positives = 160/307 (52%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
IC + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 3290 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 3349
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 3350 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 3408
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL- 199
DG+L+ +G G+LGLG + K +P +V L G Q A G ++AV+ G ++
Sbjct: 3409 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVW 3466
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ + L G+ +K A G S + ++G V
Sbjct: 3467 AFGDGDYGKLGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHV 3517
Query: 260 YIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
Y FG DR + + NH RP I L E+V G HT L S G++Y WGSN
Sbjct: 3518 YTFGQDRLIGLPEGRARNH-NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNS 3576
Query: 317 NGCLGIG 323
G LG+G
Sbjct: 3577 EGQLGLG 3583
Score = 315 (115.9 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 80/267 (29%), Positives = 135/267 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 3363 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 3422
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 3423 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 3481
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 3482 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 3531
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 3532 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 3590
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTS 305
P+L++ L ++ G H+ T+
Sbjct: 3591 PTLVTVLQGKNIRQISAGRCHSAAWTA 3617
Score = 254 (94.5 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 81/281 (28%), Positives = 125/281 (44%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + P +F + + + CG T + G V A G +G
Sbjct: 3258 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 3314
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 3315 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 3373
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 3374 GNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 3430
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
+ P + LEG ++ A G H+ + +G V+ FGD K+
Sbjct: 3431 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 3482
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
P + L ++V CG + LT G +YT+G +
Sbjct: 3483 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 3523
Score = 201 (75.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3230 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3285
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 3286 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 3342
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--- 294
+ G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 3343 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQ-GEEVVQMS 3397
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 3398 CGFKHSAVVTSDGKLFTFGNGDYGRLGLG 3426
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 393 (143.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 107/307 (34%), Positives = 160/307 (52%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
IC + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 4028 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4087
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4146
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL- 199
DG+L+ +G G+LGLG + K +P +V L G Q A G ++AV+ G ++
Sbjct: 4147 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4204
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ + L G+ +K A G S + ++G V
Sbjct: 4205 AFGDGDYGKLGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHV 4255
Query: 260 YIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
Y FG DR + + NH RP I L E+V G HT L S G++Y WGSN
Sbjct: 4256 YTFGQDRLIGLPEGRARNH-NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNS 4314
Query: 317 NGCLGIG 323
G LG+G
Sbjct: 4315 EGQLGLG 4321
Score = 352 (129.0 bits), Expect = 4.8e-30, P = 4.8e-30
Identities = 100/289 (34%), Positives = 151/289 (52%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 315 (115.9 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 80/267 (29%), Positives = 135/267 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4101 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4160
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4161 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4219
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4220 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4269
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4270 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4328
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTS 305
P+L++ L ++ G H+ T+
Sbjct: 4329 PTLVTVLQGKNVRQISAGRCHSAAWTA 4355
Score = 278 (102.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 84/290 (28%), Positives = 133/290 (45%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
S S P L+K++ V + G H+ + ++GR V+ FG K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDT 599
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N +P +I L + +V G + LTS G++Y WG CLG G
Sbjct: 600 NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCG 647
Score = 261 (96.9 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 76/270 (28%), Positives = 136/270 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+V P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 TNRVYK-PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
LR P+LI+EL ++ + G H + + VY +G+ ++ + +GN
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC--GQGNSTGP 705
Query: 279 -RRPSLISKLP--YSEEVVCGGYHTCVLTS 305
+P +S L +++ G H+ T+
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 260 (96.6 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 78/246 (31%), Positives = 121/246 (49%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 SWGDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
+Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 318 GCLGIG 323
G LG G
Sbjct: 592 GKLGHG 597
Score = 254 (94.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 81/281 (28%), Positives = 125/281 (44%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + P +F + + + CG T + G V A G +G
Sbjct: 3996 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4052
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 4053 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4111
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 4112 GNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4168
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
+ P + LEG ++ A G H+ + +G V+ FGD K+
Sbjct: 4169 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4220
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
P + L ++V CG + LT G +YT+G +
Sbjct: 4221 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4261
Score = 209 (78.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 56/163 (34%), Positives = 78/163 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 201 (75.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3968 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4023
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 4024 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 4080
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--- 294
+ G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4081 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQ-GEEVVQMS 4135
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4136 CGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4164
Score = 40 (19.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ G++L+ G+GG G +G S+ G ++ ++KE G
Sbjct: 2041 IVENGQILTHGSGGKG---YGLAST--GVTSGCYQWKFYIVKENRG 2081
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 393 (143.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 107/307 (34%), Positives = 160/307 (52%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
IC + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 4031 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4090
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4149
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL- 199
DG+L+ +G G+LGLG + K +P +V L G Q A G ++AV+ G ++
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4207
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ + L G+ +K A G S + ++G V
Sbjct: 4208 AFGDGDYGKLGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHV 4258
Query: 260 YIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
Y FG DR + + NH RP I L E+V G HT L S G++Y WGSN
Sbjct: 4259 YTFGQDRLIGLPEGRARNH-NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNS 4317
Query: 317 NGCLGIG 323
G LG+G
Sbjct: 4318 EGQLGLG 4324
Score = 352 (129.0 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 100/289 (34%), Positives = 151/289 (52%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 315 (115.9 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 80/267 (29%), Positives = 135/267 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTS 305
P+L++ L ++ G H+ T+
Sbjct: 4332 PTLVTVLQGKNVRQISAGRCHSAAWTA 4358
Score = 278 (102.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 84/290 (28%), Positives = 133/290 (45%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
S S P L+K++ V + G H+ + ++GR V+ FG K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDT 599
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N +P +I L + +V G + LTS G++Y WG CLG G
Sbjct: 600 NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCG 647
Score = 261 (96.9 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 76/270 (28%), Positives = 136/270 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+V P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 TNRVYK-PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
LR P+LI+EL ++ + G H + + VY +G+ ++ + +GN
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQC--GQGNSTGP 705
Query: 279 -RRPSLISKLP--YSEEVVCGGYHTCVLTS 305
+P +S L +++ G H+ T+
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 258 (95.9 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 77/243 (31%), Positives = 120/243 (49%)
Query: 86 LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDGS 423
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
+ GK S G+LGLG + E I ++ G + ++A T G+V SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 484 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCL 320
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG L
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 321 GIG 323
G G
Sbjct: 595 GHG 597
Score = 254 (94.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 81/281 (28%), Positives = 125/281 (44%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + P +F + + + CG T + G V A G +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4055
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 4115 GNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
+ P + LEG ++ A G H+ + +G V+ FGD K+
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
P + L ++V CG + LT G +YT+G +
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4264
Score = 209 (78.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 56/163 (34%), Positives = 78/163 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 201 (75.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 4083
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--- 294
+ G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4084 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQ-GEEVVQMS 4138
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4167
Score = 40 (19.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ G++L+ G+GG G +G S+ G ++ ++KE G
Sbjct: 2042 IVENGQILTHGSGGKG---YGLAST--GVTSGCYQWKFYIVKENRG 2082
Score = 37 (18.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 194 GGGKVLSWGAGG-SGRLGHGQE 214
G G V GA G SGRL H Q+
Sbjct: 1687 GLGTVGHSGAKGESGRLHHYQD 1708
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 393 (143.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 107/307 (34%), Positives = 160/307 (52%)
Query: 26 ICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-A 81
IC + + +Q L G G YGRLG G+ + V SA + + L +CG
Sbjct: 4034 ICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4093
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H++ LTE+G V++ G D+G+LG N P +I L+ +EVVQ+S G+ HS+ +T
Sbjct: 4094 HSMALTESGEVFSWGDGDYGKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTS 4152
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL- 199
DG+L+ +G G+LGLG + K +P +V L G Q A G ++AV+ G ++
Sbjct: 4153 DGKLFTFGNGDYGRLGLGNTSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVW 4210
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G ST++ +P+ + L G+ +K A G S + ++G V
Sbjct: 4211 AFGDGDYGKLGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHV 4261
Query: 260 YIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
Y FG DR + + NH RP I L E+V G HT L S G++Y WGSN
Sbjct: 4262 YTFGQDRLIGLPEGRARNH-NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNS 4320
Query: 317 NGCLGIG 323
G LG+G
Sbjct: 4321 EGQLGLG 4327
Score = 338 (124.0 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 98/290 (33%), Positives = 150/290 (51%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGS-GRLGHGQES 215
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G + G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGDTN 601
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 RV---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEA 652
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H + E+Y WG+N G G G
Sbjct: 653 T-ALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQG 701
Score = 315 (115.9 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 80/267 (29%), Positives = 135/267 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4107 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4166
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4167 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4225
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4226 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4275
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4276 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4334
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTS 305
P+L++ L ++ G H+ T+
Sbjct: 4335 PTLVTVLQGKNIRQISAGRCHSAAWTA 4361
Score = 274 (101.5 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 84/291 (28%), Positives = 134/291 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKMALSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRA-VDKMLFQE 274
S S P L+K++ V + G H+ + ++GR V+ FG V K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGD 599
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N +P ++ L + +V G + LTS G++Y WG CLG G
Sbjct: 600 TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCG 648
Score = 254 (94.5 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 81/281 (28%), Positives = 125/281 (44%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G +G+L + P +F + + + CG T + G V A G +G
Sbjct: 4002 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4058
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG + + + IS L+ VV Q+ T HS A+T GE++ WG G+LG
Sbjct: 4059 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4117
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q + GF+ S VT GK+ ++G G GRLG G S+
Sbjct: 4118 GNSDRQ--RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4174
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
+ P + LEG ++ A G H+ + +G V+ FGD K+
Sbjct: 4175 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4226
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
P + L ++V CG + LT G +YT+G +
Sbjct: 4227 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQD 4267
Score = 246 (91.7 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 77/244 (31%), Positives = 120/244 (49%)
Query: 86 LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KMALSFSDAQTIEAGQYCTFVISTDGS 423
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
+ GK S G+LGLG + E I ++ G + ++A T G+V SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 484 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN-GC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGK 594
Query: 320 LGIG 323
LG G
Sbjct: 595 LGHG 598
Score = 242 (90.2 bits), Expect = 8.6e-19, Sum P(2) = 8.6e-19
Identities = 77/271 (28%), Positives = 135/271 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSN-GQLGLGK 159
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G N G+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGD 599
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+V P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 600 -TNRVYK-PKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEAT 653
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
LR P+LI+EL ++ + G H + VY +G+ ++ + +GN
Sbjct: 654 ALR------PKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQC--GQGNSTG 705
Query: 279 --RRPSLISKLP--YSEEVVCGGYHTCVLTS 305
+P +S L +++ G H+ T+
Sbjct: 706 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 736
Score = 201 (75.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3974 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4029
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G S L L S ++ +L
Sbjct: 4030 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGN-SDDLHVLTVISALQGFVVTQLV- 4086
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--- 294
+ G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4087 --TSCGSDG--HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQ-GEEVVQMS 4141
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4142 CGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4170
Score = 195 (73.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 55/164 (33%), Positives = 76/164 (46%)
Query: 43 WGNGD-YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--A 643
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + +L P I L +V IS G H +D E+Y WG NS GQ G G
Sbjct: 644 CLGCGSSEATALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGNNSMGQCGQGNS 703
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 TGPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 746
Score = 39 (18.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
G++L+ G+GG G +G S+ G ++ ++KE G
Sbjct: 2049 GQILTHGSGGKG---YGLAST--GVTSGCYQWKFYIVKENRG 2085
Score = 38 (18.4 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 301 CVLTSGGELYTWGSNENG 318
C L G++ T GS G
Sbjct: 2043 CCLVENGQILTHGSGGKG 2060
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 374 (136.7 bits), Expect = 2.8e-33, P = 2.8e-33
Identities = 94/285 (32%), Positives = 149/285 (52%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TS P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 --KQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 367 (134.2 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 94/284 (33%), Positives = 139/284 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 244 (91.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 61/178 (34%), Positives = 95/178 (53%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGIS-ENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG++ EN Y P + L+ + +V I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 279 TSHEINP--RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 190 (71.9 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 41/130 (31%), Positives = 64/130 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 369 (135.0 bits), Expect = 9.7e-33, P = 9.7e-33
Identities = 96/284 (33%), Positives = 138/284 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
+ +L S +V CG HT S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 367 (134.2 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 92/285 (32%), Positives = 149/285 (52%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TS P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 --KQTS---PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 245 (91.3 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 61/178 (34%), Positives = 95/178 (53%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGIS-ENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG++ EN Y P + L+ + +V I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 279 TSHEINP--RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 40/130 (30%), Positives = 64/130 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 366 (133.9 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 95/284 (33%), Positives = 138/284 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
+ +L S E+ CG HT S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 362 (132.5 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 91/285 (31%), Positives = 148/285 (51%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TS P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 --KQTS---PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 241 (89.9 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 60/178 (33%), Positives = 96/178 (53%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGIS-ENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG++ EN Y P + L+ + +V I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYV--PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 279 TSHEINP--RKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 40/130 (30%), Positives = 64/130 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V +I+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 51/181 (28%), Positives = 80/181 (44%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKMLFQEGNHA--RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
D L G+ R P I L + +V CG YH+ L+ E++ WG N+ G LG+
Sbjct: 113 -DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL 171
Query: 323 G 323
G
Sbjct: 172 G 172
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 361 (132.1 bits), Expect = 6.9e-32, P = 6.9e-32
Identities = 94/284 (33%), Positives = 138/284 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 357 (130.7 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 89/285 (31%), Positives = 147/285 (51%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 242 (90.2 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 61/178 (34%), Positives = 96/178 (53%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGIS-ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG++ EN Y P + L+ +++V I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 279 TSHEINP--RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 41/130 (31%), Positives = 64/130 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 361 (132.1 bits), Expect = 7.0e-32, P = 7.0e-32
Identities = 94/284 (33%), Positives = 138/284 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 357 (130.7 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 89/285 (31%), Positives = 147/285 (51%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 242 (90.2 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 61/178 (34%), Positives = 96/178 (53%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGIS-ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG++ EN Y P + L+ +++V I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 279 TSHEINP--RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 41/130 (31%), Positives = 64/130 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 360 (131.8 bits), Expect = 8.8e-32, P = 8.8e-32
Identities = 90/284 (31%), Positives = 141/284 (49%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + S P +IK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 YKKQNS---PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L + + CG HT LT G ++T+G+ G LG
Sbjct: 232 VPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 353 (129.3 bits), Expect = 4.9e-31, P = 4.9e-31
Identities = 94/284 (33%), Positives = 138/284 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT S G +Y++G NG LG G
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 242 (90.2 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 61/178 (34%), Positives = 95/178 (53%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P V + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISE-NIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+++ N Y P + L+ ++VV I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDDNDRYV--PTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 279 TSHEINP--RKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
Score = 184 (69.8 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 40/130 (30%), Positives = 64/130 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H++A + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTT 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 360 (131.8 bits), Expect = 8.9e-32, P = 8.9e-32
Identities = 94/284 (33%), Positives = 138/284 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEND------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 230 ---RYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 356 (130.4 bits), Expect = 2.4e-31, P = 2.4e-31
Identities = 89/285 (31%), Positives = 147/285 (51%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 243 (90.6 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 61/178 (34%), Positives = 96/178 (53%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGIS-ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG++ EN Y P + L+ +++V I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYV--PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 279 TSHEINP--RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 189 (71.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 41/130 (31%), Positives = 64/130 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 353 (129.3 bits), Expect = 5.0e-31, P = 5.0e-31
Identities = 92/285 (32%), Positives = 149/285 (52%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS L+ P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPL-RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E+ G EP+ ++G + +V ++ G HS A++ G+++ WG S+GQLGL
Sbjct: 64 GQLG-HESEGSKPEPIGALAG--QHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL S++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 324 (119.1 bits), Expect = 6.3e-28, P = 6.3e-28
Identities = 89/279 (31%), Positives = 135/279 (48%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG S S+ P+ A + +ACG +H++ L++ G V++ G GQLG++
Sbjct: 64 GQLGHESEGSKPEPI--GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI 121
Query: 109 IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
P I L ++ ++QIS G H A+ DG+ + WG+NS GQLGLGK+
Sbjct: 122 EDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS- 180
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +V+ L GI Q A G S A++ G V WG SG+LG E
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD---------RE 231
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+P +K L KV + G H+A + ++G V+ FG + ++ N P + +L
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 288 PYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
SE ++ CG +HT S G +Y +G G LG G
Sbjct: 292 MGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 220 (82.5 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 62/196 (31%), Positives = 95/196 (48%)
Query: 27 CKRW--ISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHT 83
C W ++ +F WG YG+LGLG S+ P + + L +A GGAH+
Sbjct: 144 CGNWHCLALAADGQFFT-WGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHS 202
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDG 142
L+ +G V+ G N GQLG+S+ P + L+ + VV IS G H++ +T G
Sbjct: 203 FALSLSGAVFGWGKNSSGQLGLSDERDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSG 261
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
++ +G S GQLG +V P +V L G Q A G ++A V G + ++
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNP--RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 202 GAGGSGRLGHGQESSI 217
G G G+LG G ++
Sbjct: 320 GCGTRGQLGTGHTCNV 335
Score = 177 (67.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 43/130 (33%), Positives = 61/130 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G HH+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 351 (128.6 bits), Expect = 8.1e-31, P = 8.1e-31
Identities = 93/284 (32%), Positives = 141/284 (49%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG+G+ E S + P C F+ LK +ACG H+LFL G VY G N G
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + G S P + L + + +S G HS A+ G+++ WG GQLGLG
Sbjct: 65 QLGHDK--GGS-RPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT- 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + + +P ++ L Q G +A++ G++ WG SG+LG G+ G
Sbjct: 121 AEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGK-----G- 174
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S +P+ +K L G+ + +AG HS + +G V+ +G + ++ +
Sbjct: 175 --EPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAV 232
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P I K S++VV CG HT LT G L+T+G+ G LG
Sbjct: 233 PCHI-KFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLG 275
Score = 340 (124.7 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 94/289 (32%), Positives = 146/289 (50%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG SR P + A + + ++CG AH+L + E G V+A G D GQL
Sbjct: 59 GSNSCGQLGHDKGGSR--PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQL 116
Query: 104 GISENIGYSLEPLRISGLKKE-----VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+ G + E +R+ L K+ + Q+ G HH A++ DG+L++WG+NS+GQLGLG
Sbjct: 117 GL----GTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLG 172
Query: 159 K-KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
K + + + P P K C GI Q + G + S A++ G V WG +G+LG E
Sbjct: 173 KGEPSTLSPQPLKSLC--GIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQD- 229
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
R+ P IK L KV + G H+A + + G ++ FG+ + ++ +
Sbjct: 230 ----RAV----PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRN 281
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
P + +L +E ++ CG HT S G +Y +G N G LG G
Sbjct: 282 EPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330
Score = 218 (81.8 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 59/178 (33%), Positives = 91/178 (51%)
Query: 42 LWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG G+LGLG E S P + L ++ GG H+ L+ +G V+ G N
Sbjct: 160 VWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSA 219
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+++ ++ P I L+ + VV IS G H++A+T +G L+ +G S GQLG
Sbjct: 220 GQLGLNDEQDRAV-PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLG--H 276
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ + P+P +V L G Q A G ++A V G + ++G G+LG G S
Sbjct: 277 DSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGS 334
Score = 168 (64.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 44/143 (30%), Positives = 69/143 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT+ G ++ G GQ
Sbjct: 214 WGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG L P R+ L EV QI+ G +H+ A + G +Y +G N+ GQLG G +
Sbjct: 274 LGHDSTRNEPL-PRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIR 332
Query: 161 AAKVIPIP-TKVE--CLSGIFTK 180
+ P+P + ++ C+ +T+
Sbjct: 333 GSAKSPVPVSNIQPLCIGNAYTR 355
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG+ G+G+LG G + S + PR +G +K A G HS + +G
Sbjct: 2 MLCWGSSGAGQLGIGASEA--------SVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDG 53
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
VY G + ++ +G RP L+ L + V CG H+ + G+++ WG+
Sbjct: 54 SVYTCGSNSCGQLGHDKGGS--RPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAG 111
Query: 316 ENGCLGIG 323
+ G LG+G
Sbjct: 112 DGGQLGLG 119
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 350 (128.3 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 100/289 (34%), Positives = 151/289 (52%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG-GA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ G+ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISG-LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G L+ K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Score = 278 (102.9 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 84/290 (28%), Positives = 133/290 (45%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L G+ E +P + +F + + G T ++ G V A G +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433
Query: 102 QLGISENIGYS-LEPLRIS---GLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLG 156
+LG+ ++ S L+ L +KK V S G H+ A T +GE++ WG G+LG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLG 491
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + L G + G+ S AVT G++ +WG G GRLGHG
Sbjct: 492 HGNSSTQKYPKLIQGP-LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGD--- 547
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
S S P L+K++ V + G H+ + ++GR V+ FG K+ +
Sbjct: 548 ------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDT 599
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N +P +I L + +V G + LTS G++Y WG CLG G
Sbjct: 600 NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCG 647
Score = 260 (96.6 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 76/270 (28%), Positives = 136/270 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+V P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 TNRVYK-PKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
LR P+LI+EL ++ + G H + + VY +G+ ++ + +GN
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQC--GQGNSTGP 705
Query: 279 -RRPSLISKLP--YSEEVVCGGYHTCVLTS 305
+P +S L +++ G H+ T+
Sbjct: 706 ITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 258 (95.9 bits), Expect = 8.6e-21, P = 8.6e-21
Identities = 77/243 (31%), Positives = 120/243 (49%)
Query: 86 LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDGS 423
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
+ GK S G+LGLG + E I ++ G + ++A T G+V SWG
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 484 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYT 534
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCL 320
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG L
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 321 GIG 323
G G
Sbjct: 595 GHG 597
Score = 206 (77.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 55/163 (33%), Positives = 78/163 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 349 (127.9 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 94/285 (32%), Positives = 147/285 (51%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+ + L+ P VC S+K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L E +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--KPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL-M 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F S+ +P+ ++ LEG+ + AAG HS + +G V+ +G ++ +
Sbjct: 175 F---PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL +++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 314 (115.6 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 83/267 (31%), Positives = 126/267 (47%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEED---------RESPCHVKLLRAQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIG 323
HT S G +Y +G G LG G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 257 (95.5 bits), Expect = 9.1e-21, P = 9.1e-21
Identities = 68/224 (30%), Positives = 106/224 (47%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P K+ L + G E + +T G V ++GAG G+LGH +
Sbjct: 228 EDRESPCHVKL--LRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND---- 281
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 282 -----EVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 225 (84.3 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 62/196 (31%), Positives = 99/196 (50%)
Query: 27 CKRW--ISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHT 83
C W ++ +F WG +G+LGLG S+ P + E L +A GGAH+
Sbjct: 144 CGNWHCLALAADGQFFT-WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 202
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG 142
L+ +G V+ G+N+ GQLG+S+ P + L+ ++VV IS G H++ +T G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRE-SPCHVKLLRAQKVVYISCGEEHTAVLTKSG 261
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
++ +G S GQLG +V P +V L G Q A G + ++A V G + ++
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 202 GAGGSGRLGHGQESSI 217
G G G+LG G ++
Sbjct: 320 GCGARGQLGTGHTCNV 335
Score = 224 (83.9 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 70/236 (29%), Positives = 113/236 (47%)
Query: 96 GLNDFGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G GQ GIS N+ G EP ++ G + V +++ G HS + DGE+Y G N+
Sbjct: 5 GYWSLGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG ++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 64 GQLGHEREGNK----PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG-- 117
Query: 213 QESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
L +T E PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 --------LMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169
Query: 271 -LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
L +E P + L P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 170 GLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 175 (66.7 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 50/180 (27%), Positives = 79/180 (43%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G + SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 173 (66.0 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 343 (125.8 bits), Expect = 4.4e-30, P = 4.4e-30
Identities = 93/285 (32%), Positives = 145/285 (50%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+ S L+ P VC S+K +ACGG H++FL E G VY G+N
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + ++ ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-M 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F TS P+ ++ LEG+ + AAG HS + +G V+ +G ++ +
Sbjct: 175 FPSQTS---PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL +++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 316 (116.3 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 84/267 (31%), Positives = 127/267 (47%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD---------RESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIG 323
HT L S G +Y +G G LG G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTG 330
Score = 226 (84.6 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 62/196 (31%), Positives = 99/196 (50%)
Query: 27 CKRW--ISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHT 83
C W ++ +F WG +G+LGLG S+ P + E L +A GGAH+
Sbjct: 144 CGNWHCLALAADGQFFT-WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHS 202
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG 142
L+ +G V+ G+N+ GQLG+S+ P + L+ ++VV IS G H++ +T G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSG 261
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
++ +G S GQLG +V P +V L G Q A G + ++A V G + ++
Sbjct: 262 GVFTFGAGSCGQLGHDSVNDEVNP--RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319
Query: 202 GAGGSGRLGHGQESSI 217
G G G+LG G ++
Sbjct: 320 GCGAKGQLGTGHTCNV 335
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 42/130 (32%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A+ G +Y +G + GQLG G
Sbjct: 274 LG-HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 346 (126.9 bits), Expect = 4.5e-30, P = 4.5e-30
Identities = 96/322 (29%), Positives = 159/322 (49%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
A +K++LK D+ L G + + + F ++G+ ++G+LGLG+ + +P A
Sbjct: 27 APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
+ +K ACG HTL T G +YA G N+ GQLG+ + N S + + +
Sbjct: 85 LKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G + S+A+T DG LYMWG NS GQ+GLGK++ + P +V +F + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTP--QEVSVGKRVFW--VSCGY 200
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G + ++G SG+LG E + + P+ + ++ V++A G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYS--EEVVCGGYHTC 301
H+ + EN VY FG ++ G +R P ++ + CG HT
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQL--GHGTFIFESRLPRVVEHFRKGRVKHAACGENHTA 309
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 310 LITDNGLLYTFGDGRHGKLGLG 331
Score = 318 (117.0 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 98/288 (34%), Positives = 143/288 (49%)
Query: 23 KLGICKRW--ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACG 79
KL C R + T + A GN + G+LGLG R + F K +K LA G
Sbjct: 91 KLTACGRTHTLVFTSRGNLYACGGNNE-GQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAG 149
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
+ LT+ G +Y G N GQ+G+ + +L P +S + K V +S GY+HS+ +T
Sbjct: 150 SNTSAALTQDGRLYMWGDNSEGQIGLGKESN-ALTPQEVS-VGKRVFWVSCGYYHSAFVT 207
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
VDG LY +G+ +G+LGL + +P +V + Q A G +VA+T +V
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVV-QVACGGGHTVALTEN-EVY 265
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
S+G G G+LGHG F+ + PR+++ +VK AA G H+A I +NG +
Sbjct: 266 SFGLGQFGQLGHGT------FIFESR--LPRVVEHFRKGRVKHAACGENHTALITDNGLL 317
Query: 260 YIFGDRAVDKMLFQEGNHAR--RPSLISK-LPYS-EEVVCGGYHTCVL 303
Y FGD K+ E N +P+L + L Y V CGG H VL
Sbjct: 318 YTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVL 365
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 335 (123.0 bits), Expect = 5.3e-30, P = 5.3e-30
Identities = 90/270 (33%), Positives = 128/270 (47%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGEL+ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L GV V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 291 (107.5 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 73/225 (32%), Positives = 118/225 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K+VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 238 (88.8 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 84/279 (30%), Positives = 127/279 (45%)
Query: 59 RWRPV--VCSAFEKHSL-KALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
+W P+ + S E S+ KA G + +++T++ V+ GLN LG +N +L
Sbjct: 6 KW-PIFTLLSPQETGSIRKACVFGISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQS-TL 63
Query: 114 EPLRISGL-KKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
P ++ L K + +S G H T DG +Y WG N QLG G + PI
Sbjct: 64 VPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV-- 121
Query: 172 ECLSGIFTKQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
C + + KQ A G S+A+ G++ +WG G++G G + ++ T
Sbjct: 122 -C-TNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGS---------TANQPT 170
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISK 286
PR + L KV A G S + ++G VY +G ++ L GN P ++
Sbjct: 171 PRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT-PVRVAA 229
Query: 287 LP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L ++VCG HT LT G LY WG+N G LG G
Sbjct: 230 LHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 189 (71.6 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 48/138 (34%), Positives = 71/138 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 343 (125.8 bits), Expect = 5.8e-30, P = 5.8e-30
Identities = 92/285 (32%), Positives = 145/285 (50%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+ + L+ P VC S+K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL-M 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ ++ LEG+ + AAG HS + +G V+ +G ++ +
Sbjct: 177 -----SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL +++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 313 (115.2 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 83/267 (31%), Positives = 126/267 (47%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEED---------RESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIG 323
HT S G +Y +G G LG G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGAKGQLGTG 330
Score = 254 (94.5 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 67/224 (29%), Positives = 106/224 (47%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P K+ + + G E + +T G V ++GAG G+LGH +
Sbjct: 228 EDRESPCHVKLLRTQKVV--YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND---- 281
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 282 -----EVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 225 (84.3 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 62/196 (31%), Positives = 99/196 (50%)
Query: 27 CKRW--ISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHT 83
C W ++ +F WG +G+LGLG S+ P + E L +A GGAH+
Sbjct: 144 CGNWHCLALAADGQFFT-WGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHS 202
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG 142
L+ +G V+ G+N+ GQLG+S+ P + L+ ++VV IS G H++ +T G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSG 261
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
++ +G S GQLG +V P +V L G Q A G + ++A V G + ++
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 202 GAGGSGRLGHGQESSI 217
G G G+LG G ++
Sbjct: 320 GCGAKGQLGTGHTCNV 335
Score = 224 (83.9 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 69/235 (29%), Positives = 113/235 (48%)
Query: 96 GLNDFGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+
Sbjct: 5 GYWSLGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-H 211
GQLG ++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 64 GQLGHEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLM 119
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM- 270
E S+ PRLI++L + + G H + +G+ + +G + ++
Sbjct: 120 TTEDSVA---------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG 170
Query: 271 LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
L +E P + L P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 171 LGKEYPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 174 (66.3 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 50/180 (27%), Positives = 79/180 (43%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 173 (66.0 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 343 (125.8 bits), Expect = 5.8e-30, P = 5.8e-30
Identities = 92/285 (32%), Positives = 146/285 (51%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+ + L+ P VC S+K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + ++ ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-M 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F S+ +P+ ++ LEG+ + AAG HS + +G V+ +G ++ +
Sbjct: 175 F---PSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL +++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 312 (114.9 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 83/267 (31%), Positives = 126/267 (47%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD---------RESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIG 323
HT S G +Y +G G LG G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 255 (94.8 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 67/224 (29%), Positives = 106/224 (47%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P K+ + + G E + +T G V ++GAG G+LGH +
Sbjct: 228 KDRESPCHVKLLRTQKVV--YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND---- 281
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 282 -----EVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 225 (84.3 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 62/196 (31%), Positives = 99/196 (50%)
Query: 27 CKRW--ISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHT 83
C W ++ +F WG +G+LGLG S+ P + E L +A GGAH+
Sbjct: 144 CGNWHCLALAADGQFFT-WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 202
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG 142
L+ +G V+ G+N+ GQLG+S+ P + L+ ++VV IS G H++ +T G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSG 261
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
++ +G S GQLG +V P +V L G Q A G + ++A V G + ++
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 202 GAGGSGRLGHGQESSI 217
G G G+LG G ++
Sbjct: 320 GCGARGQLGTGHTCNV 335
Score = 223 (83.6 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 69/235 (29%), Positives = 113/235 (48%)
Query: 96 GLNDFGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+
Sbjct: 5 GYWSLGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-H 211
GQLG ++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 64 GQLGHEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLM 119
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM- 270
E S+ PRLI++L + + G H + +G+ + +G + ++
Sbjct: 120 TTEDSVA---------VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG 170
Query: 271 LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
L +E P + L P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 171 LGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 173 (66.0 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 50/180 (27%), Positives = 79/180 (43%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 169 (64.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 42/130 (32%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 342 (125.4 bits), Expect = 7.4e-30, P = 7.4e-30
Identities = 91/285 (31%), Positives = 147/285 (51%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS L+ P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E+ G +P + L + +V ++ G HS A++ G+++ WG S+GQLGL
Sbjct: 64 GQLG-HESEGS--KPAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL S++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 88/279 (31%), Positives = 133/279 (47%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG S S+ P + +ACG +H++ L++ G V++ G GQLG++
Sbjct: 64 GQLGHESEGSK--PAWVGTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI 121
Query: 109 IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
P I L ++ ++QIS G H A+ DG+ + WG+NS GQLGLGK+
Sbjct: 122 EDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS- 180
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +V+ L GI Q A G S A++ G V WG SG+LG E
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERD---------RE 231
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+P +K L KV + G H+A + ++G V+ FG + ++ N P + +L
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 288 PYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
SE ++ CG +HT S G +Y +G G LG G
Sbjct: 292 MGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 220 (82.5 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 62/196 (31%), Positives = 95/196 (48%)
Query: 27 CKRW--ISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHT 83
C W ++ +F WG YG+LGLG S+ P + + L +A GGAH+
Sbjct: 144 CGNWHCLALAADGQFFT-WGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHS 202
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDG 142
L+ +G V+ G N GQLG+S+ P + L+ + VV IS G H++ +T G
Sbjct: 203 FALSLSGAVFGWGKNSSGQLGLSDERDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSG 261
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
++ +G S GQLG +V P +V L G Q A G ++A V G + ++
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNP--RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 202 GAGGSGRLGHGQESSI 217
G G G+LG G ++
Sbjct: 320 GCGTRGQLGTGHTCNV 335
Score = 177 (67.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 43/130 (33%), Positives = 61/130 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G HH+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 341 (125.1 bits), Expect = 8.8e-30, P = 8.8e-30
Identities = 87/267 (32%), Positives = 134/267 (50%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSR 166
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 167 SQA-IPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISKLPYS-EEVVCGGYHTC--VLTSG 306
LI + ++ C YHT V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306
Score = 299 (110.3 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 84/252 (33%), Positives = 125/252 (49%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKK-EVVQISTGYHH 134
A G H+L L VY+ G N +GQLG + S E P I L V +S G H
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLG--QRRDQSTERPEPIQALNDLHVDLVSCGKEH 85
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G+++ WG S GQLG+G+ ++ +PTK++ L+GI Q + G S+A++
Sbjct: 86 SVAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSE 144
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG HS +
Sbjct: 145 DGHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALS 196
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGE 308
G + +G ++ GN + +P I L + CG HT VLT G+
Sbjct: 197 LTGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255
Query: 309 LYTWGSNENGCL 320
++T+G N +G L
Sbjct: 256 VFTFGGNSSGQL 267
Score = 248 (92.4 bits), Expect = 7.7e-20, P = 7.7e-20
Identities = 65/208 (31%), Positives = 106/208 (50%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
SG+ E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ +
Sbjct: 20 SGI--ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLH 75
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+ G E SVAV GKV +WGAG G+LG G+ I + P IK L G+
Sbjct: 76 VDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGI 127
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKL---PYSEEVV 294
K+ + G HS + E+G V+ +G + ++ + + ++ P + L P ++ V
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQ-VA 186
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGI 322
GG H+ L+ G + WGSN +G L +
Sbjct: 187 AGGTHSFALSLTGTSFGWGSNRSGQLAL 214
Score = 244 (91.0 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 66/224 (29%), Positives = 107/224 (47%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 145 (56.1 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 44/152 (28%), Positives = 71/152 (46%)
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
SGI QAA G S+ + +V S G G+LG ++ +ST P I+
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRD-------QSTER--PEPIQA 70
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RPSLISKLPYSE-- 291
L + V + + G HS + G+V+ +G + ++ E P+ I L +
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG YH+ L+ G +++WG N G LG+G
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG 162
Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + V CG H+ + G+++ WG+ G LGIG
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIG 109
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 341 (125.1 bits), Expect = 9.0e-30, P = 9.0e-30
Identities = 98/321 (30%), Positives = 161/321 (50%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + V +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL-KNVSNVC-VPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLG--LPNQLLGNHR-----TPQLVSEIPEKVIQVACGGE-H 254
Query: 250 SACIDENGRVYIFG-----DRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFETSE----PKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 294 (108.6 bits), Expect = 9.6e-25, P = 9.6e-25
Identities = 102/293 (34%), Positives = 149/293 (50%)
Query: 23 KLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACG 79
KL C R + ST A GN + G+LGLG E R V S F +H +K L+ G
Sbjct: 90 KLAACGRNHTLVSTEGGNVYATGGNNE-GQLGLGDTEERNTFHVISFFTSEHKIKQLSAG 148
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
+ LTE G ++ G N GQ+G+ +N+ P +++ + K V IS GY+HS+ +T
Sbjct: 149 SNTSAALTEDGRLFMWGDNSEGQIGL-KNVSNVCVPQQVT-IGKPVSWISCGYYHSAFVT 206
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGK 197
DGELY++G+ NG+LGL + P + +S I K Q A G E +V +T
Sbjct: 207 TDGELYVFGEPENGKLGLPNQLLGNHRTP---QLVSEIPEKVIQVACGGEHTVVLTENA- 262
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V ++G G G+LG G FL TSE P++I+ + + + G H+A I + G
Sbjct: 263 VYTFGLGQFGQLGLGT------FLFETSE--PKVIENIRDQTISYISCGENHTALITDIG 314
Query: 258 RVYIFGDRAVDKM-LFQEG--NHARRPSLISK-LPYSEEVV-CGGYHTCVLTS 305
+Y FGD K+ L E NH P+L S L + ++V CGG H V +
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFI-PTLCSNFLRFIVKLVACGGCHMVVFAA 366
Score = 185 (70.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 67/251 (26%), Positives = 117/251 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G++GL ++ + P + + S ++CG H+ F+T G +Y G + G
Sbjct: 163 MWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSW--ISCGYYHSAFVTTDGELYVFGEPENG 220
Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG+ ++ +G P +S + ++V+Q++ G H+ +T + +Y +G GQLGLG
Sbjct: 221 KLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTF 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E + + G + +T G + ++G G G+LG G E+ F
Sbjct: 280 LFETSE-PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLEN----F 334
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-FQEGNHAR 279
T+ + P L VK+ A G H V+ R V K + F E N
Sbjct: 335 ---TNHFIPTLCSNFLRFIVKLVACGGCHMV-------VFAAPHRGVAKEIEFDEINDTC 384
Query: 280 RPSLISKLPYS 290
S+ + LPYS
Sbjct: 385 L-SVATFLPYS 394
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 331 (121.6 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 88/270 (32%), Positives = 128/270 (47%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L G+ V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 74/225 (32%), Positives = 117/225 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 232 (86.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 82/279 (29%), Positives = 127/279 (45%)
Query: 59 RWRPV--VCSAFEKHSL-KALACGGA--HTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
+W P+ + S E S+ KA G + +++T+ V+ GLN LG +N +L
Sbjct: 6 KW-PIFTLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQS-TL 63
Query: 114 EPLRISGL-KKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
P ++ L K++ +S G H T DG +Y WG N QLG G + P+
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV-- 121
Query: 172 ECLSGIFTKQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
C + + KQ A G S+A+ G++ +WG G++G G + ++ T
Sbjct: 122 -C-TNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGS---------TANQPT 170
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISK 286
PR + L +V A G S + ++G VY +G ++ L GN P ++
Sbjct: 171 PRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT-PVRVAA 229
Query: 287 LPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L ++VCG HT LT G LY WG+N G LG G
Sbjct: 230 LHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 187 (70.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 44/114 (38%), Positives = 63/114 (55%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQ 154
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ 316
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 338 (124.0 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 91/285 (31%), Positives = 145/285 (50%)
Query: 43 WGNGDYGRLGLG-SLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+ +L+ P VC S+K +ACGG H++FL E G VY G+N
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-M 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F S+ +P+ ++ LEG+ + AG HS + +G V+ +G ++ +
Sbjct: 175 F---PSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL +++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 81/267 (30%), Positives = 125/267 (46%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WG+NS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD---------RESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIG 323
HT S G +Y +G G LG G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 255 (94.8 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 67/224 (29%), Positives = 106/224 (47%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL ++E P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q+ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P K+ + + G E + +T G V ++GAG G+LGH +
Sbjct: 228 KDRESPCHVKLLRTQKVV--YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND---- 281
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 282 -----EVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 227 (85.0 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 69/234 (29%), Positives = 115/234 (49%)
Query: 96 GLNDFGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+
Sbjct: 5 GYWSLGQPGISPNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG ++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 64 GQLGHEREGNK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG-- 117
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-L 271
++ S + PRLI++L + + G H + +G+ + +G + ++ L
Sbjct: 118 ----LMTIEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171
Query: 272 FQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+E P + L P ++ VV GG H+ L+ G ++ WG N G LG+
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQ-VVAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 221 (82.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 61/196 (31%), Positives = 98/196 (50%)
Query: 27 CKRW--ISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHT 83
C W ++ +F WG +G+LGLG S+ P + E L + GGAH+
Sbjct: 144 CGNWHCLALAADGQFFT-WGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHS 202
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG 142
L+ +G V+ G+N+ GQLG+S+ P + L+ ++VV IS G H++ +T G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSG 261
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
++ +G S GQLG +V P +V L G Q A G + ++A V G + ++
Sbjct: 262 GVFTFGAGSCGQLGHDSMNDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 202 GAGGSGRLGHGQESSI 217
G G G+LG G ++
Sbjct: 320 GCGARGQLGTGHTCNV 335
Score = 172 (65.6 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 50/180 (27%), Positives = 79/180 (43%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLG 172
Score = 169 (64.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 42/130 (32%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 329 (120.9 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 87/279 (31%), Positives = 139/279 (49%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G G LG+G ++S P + + +L+ G G H + T G V+ G N + Q
Sbjct: 71 GTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQ 130
Query: 103 LGISENIGYSLEPLRIS-GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + L P IS L K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 131 LG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 189
Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 190 ANQ--PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS------ 241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S ++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN +
Sbjct: 242 ---SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSN 296
Query: 280 R----PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ P ++ K E C HT T GG +Y WG
Sbjct: 297 QSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 303 (111.7 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 75/239 (31%), Positives = 119/239 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + P R++G K V+ I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQPI-PRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G++ +WGA G+LG G +S+
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSN--- 296
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y ++ E + + ++IAA H SA + G VY++G ++ H
Sbjct: 297 -----QSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHTH 349
Score = 271 (100.5 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 83/277 (29%), Positives = 129/277 (46%)
Query: 59 RWRPV--VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYS 112
+W P+ +CS E ++ AC G L+ T ++ G N G LG+ + I +
Sbjct: 30 KW-PIFSLCSEEELQLIRQ-ACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQST 86
Query: 113 LEPLRISGLK-KEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+EP R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 87 IEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHIS 146
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
LS + A G S+ +T G+V +WG SG++G G + ++ PR
Sbjct: 147 TN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPR 196
Query: 231 LIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP 288
+ L+ V A G + S + + G VY++G ++ L GN P ++ L
Sbjct: 197 RVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPT-PCRVAALQ 255
Query: 289 --YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 256 GIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 43/115 (37%), Positives = 64/115 (55%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQ 154
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ 340
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 336 (123.3 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 98/301 (32%), Positives = 144/301 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + +P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 509 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYG 559
Query: 269 KMLFQEGN-HA--RRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ GN HA + P+ + KL S EE+ CG YH VLTS E+YTWG NG LG
Sbjct: 560 QL----GNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 615
Query: 323 G 323
G
Sbjct: 616 G 616
Score = 282 (104.3 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 92/309 (29%), Positives = 144/309 (46%)
Query: 42 LWGNG-DYGRLGLG------SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGC 91
+WG G G LG G S + + ++ A E ++ +ACGG H + +T+ G
Sbjct: 269 IWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGE 328
Query: 92 VYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWG 148
++ G G+LG + NI +P I L ++ ++ G HS A+T+ G+LY WG
Sbjct: 329 SFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG 385
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
K G LG G + + +P L GI A G + VT G++ ++G G G
Sbjct: 386 KGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGV 444
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE------------N 256
LGHG + S+ + PR + L+G++ AA G H+A + E +
Sbjct: 445 LGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 495
Query: 257 GRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTW 312
G+++ +GD DK GN + P+ ++ L P +V CG T LT+ G +YT
Sbjct: 496 GKLFTWGDG--DKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTM 553
Query: 313 GSNENGCLG 321
GS G LG
Sbjct: 554 GSPVYGQLG 562
Score = 221 (82.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 78/297 (26%), Positives = 127/297 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG GD+G LG G+ S W P V E + ++ACG HT +T G ++ G FG
Sbjct: 384 WGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFG 443
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITV------------DGELYMWG 148
LG + + P + LK V+ + G H++A+ G+L+ WG
Sbjct: 444 VLGHGDKKSVFI-PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG 502
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG G K K++P T V L Q A G +VA+T G V + G+ G+
Sbjct: 503 DGDKGRLGHGNKEPKLVP--TCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG+ ++ + +L K V+ A G H A + VY +G +
Sbjct: 561 LGNSHADG-----KTPNRVEGKLHKSF----VEEIACGAYHVAVLTSRTEVYTWGKGSNG 611
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW--GSNENGCLG 321
++ + + P+L+ L + + CG T + ++ W G +++ C G
Sbjct: 612 RLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASGMDQSMCSG 664
Score = 219 (82.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 65/227 (28%), Positives = 105/227 (46%)
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN-SNGQLGLGKKAA------ 162
G ++ R+S + V S G H + G++++WG+ G LG G +
Sbjct: 235 GMGMDAFRVS-MSSAVSSSSHGSGHDDGDAL-GDVFIWGEGIGEGVLGGGNRRVGSSFDI 292
Query: 163 KVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K+ + P +E + + A G + +V VT G+ SWG GRLGHG +S+I
Sbjct: 293 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI---- 348
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--- 278
P+LI L +++ A G HS + +G +Y +G D + GN
Sbjct: 349 -----QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKG--DFGVLGHGNEVSHW 401
Query: 279 --RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+R + + + + + CG YHT V+TS G+L+T+G G LG G
Sbjct: 402 VPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHG 448
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 327 (120.2 bits), Expect = 4.3e-29, P = 4.3e-29
Identities = 96/274 (35%), Positives = 136/274 (49%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P L +L+ G G H L +TE G +YA G N + QLG + N
Sbjct: 54 LGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRIS-GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
G S P+ +S L+ K V ++S G HHS A+T +GE++ WG N+ GQ+G G A + P
Sbjct: 114 QGVS--PILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQ--P 169
Query: 167 IPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P KV CL A G S+AVT G+V WG G+G+LG G + L
Sbjct: 170 TPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQL------- 222
Query: 226 EYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
TP RLI L+G V A+G+ HS + + G +Y +G ++ GN + + S +
Sbjct: 223 --TPCRLIA-LQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPV 277
Query: 285 SKLPYSEEVV----CGGYHTCVL-TSGGELYTWG 313
+ E +V C HT T G++Y WG
Sbjct: 278 QVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 295 (108.9 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 77/225 (34%), Positives = 121/225 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P++ S + + ++CG H+L LT G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P ++S K +V I+ G S A+T +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P ++ L G Q A G+ S+A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQLTPC--RLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ ++ E E + V+IAA H SA ++G+VY++G
Sbjct: 276 PVQ--------VMTEKERI-VEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 265 (98.3 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 85/276 (30%), Positives = 127/276 (46%)
Query: 58 SRWRPV--VCSAFEKHSLKALACGGA---HTLFLTETGCVYATGLNDFGQLGISENIGYS 112
S+W P+ + SA E S++ GA +++T VY GLN LG ++ +
Sbjct: 5 SKW-PLFTLLSAQELSSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQS-T 62
Query: 113 LEPLRISGLK-KEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+ P ++ L K+++ +S G H +T DGELY WG N QLG G V PI
Sbjct: 63 IAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVS 122
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L G + + G S+A+T G+V +WG G++G G + ++ TPR
Sbjct: 123 TN-LQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGS---------TANQPTPR 172
Query: 231 LIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP 288
+ KV + A G S + +NG VY +G ++ L GN LI+
Sbjct: 173 KVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQG 232
Query: 289 YSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
+ + GY H+ LT G LY WG+N G LG G
Sbjct: 233 FCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTG 268
Score = 180 (68.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 42/114 (36%), Positives = 65/114 (57%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P A + + +A G AH+L LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQ 154
LG N L P+++ K+ +V+I+ + H S+A T G++YMWG+ GQ
Sbjct: 265 LGTG-NKSNQLSPVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ-CRGQ 316
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 332 (121.9 bits), Expect = 8.5e-29, P = 8.5e-29
Identities = 83/267 (31%), Positives = 133/267 (49%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 53 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 112
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 113 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 172
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L ++ G
Sbjct: 173 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQL------ALSGNSA 225
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ + P
Sbjct: 226 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQ 285
Query: 283 LISKLP-YSEEVVCGGYHTC--VLTSG 306
LI + + ++ CG YHT V T+G
Sbjct: 286 LIEGIGGHVSQIECGSYHTIAYVYTTG 312
Score = 289 (106.8 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 82/252 (32%), Positives = 127/252 (50%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 31 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 88
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S+A
Sbjct: 89 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 147
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG HS
Sbjct: 148 LSEDGQVFSWGSNRQGQLGLGNNLC--------SQASPQKVKSLEGIPLAQVAAGGTHSF 199
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
+ G + +G+ ++ GN A+ +P I L V CG HT VLT
Sbjct: 200 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 258
Query: 306 GGELYTWGSNEN 317
G+++T+G + +
Sbjct: 259 DGQVFTFGGSSS 270
Score = 237 (88.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 65/224 (29%), Positives = 108/224 (48%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 104 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 163
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 164 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + I P + L + + G+E + +T G+V ++G S +L H S G
Sbjct: 224 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG 283
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I + A + G+V G
Sbjct: 284 ---------PQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 318
Score = 236 (88.1 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 64/215 (29%), Positives = 110/215 (51%)
Query: 114 EPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+P R+ +G ++++ ++G HS + + +Y G NS GQLG +K+ + P ++
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEPIQ 75
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + + G E SVAV G+V +WGAG G+LG G ES + F+ P I
Sbjct: 76 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFM-------PTKI 127
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKL 287
L G+K+ + G HS + E+G+V+ +G ++ L + + + SL +
Sbjct: 128 NSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-EGI 186
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P ++ V GG H+ L+ G + WG+N +G L +
Sbjct: 187 PLAQ-VAAGGTHSFALSLMGTSFGWGNNRSGQLAL 220
Score = 165 (63.1 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 47/159 (29%), Positives = 79/159 (49%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++E +G+ +AA G S+ + +V S G G+LG Q+S +ST
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSP-----QSTKR- 70
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RPSLISK 286
P I+ L V + + + G HS + GRV+ +G + ++ E P+ I+
Sbjct: 71 -PEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 129
Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + +V CG YH+ L+ G++++WGSN G LG+G
Sbjct: 130 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 168
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 324 (119.1 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 88/270 (32%), Positives = 127/270 (47%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 83 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 141
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 142 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 199
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 200 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 251
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 252 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 310
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 311 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 286 (105.7 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 74/225 (32%), Positives = 116/225 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 128 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 187
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 188 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 246
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 247 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 304
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 305 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 242 (90.2 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 78/250 (31%), Positives = 117/250 (46%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH-HSSAITVD 141
L++T+ V+ GLN LG +N +L P ++ L K++ +S G H T D
Sbjct: 64 LYVTDNDEVFVFGLNYSNCLGTGDNQS-TLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 122
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKV 198
G +Y WG N QLG G + PI C + + KQ A G S+A+ G+V
Sbjct: 123 GVVYAWGHNGYSQLGNGTTNQGIAPIQV---C-TNLLIKQVVEVACGSHHSMALAADGEV 178
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENG 257
+WG G++G G + ++ TPR + +K ++ A G S + +NG
Sbjct: 179 FAWGYNNCGQVGSGS---------TANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNG 229
Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWG 313
VY +G ++ L GN P ++ L +S ++VCG HT LT G LY WG
Sbjct: 230 EVYGWGYNGNGQLGLGNNGNQLT-PVRVAAL-HSVCVNQIVCGYAHTLALTDEGLLYAWG 287
Query: 314 SNENGCLGIG 323
+N G LG G
Sbjct: 288 ANTYGQLGTG 297
Score = 191 (72.3 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 46/114 (40%), Positives = 63/114 (55%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 234 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 293
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQ 154
LG N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 294 LGTG-NKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ 345
Score = 183 (69.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 61/217 (28%), Positives = 106/217 (48%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + ++P K+E
Sbjct: 42 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 98
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 99 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 155
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LISKLPY 289
IK++ V+V A G HS + +G V+ +G ++ G+ A +P+ ++ +
Sbjct: 156 IKQV--VEV---ACGSHHSMALAADGEVFAWGYNNCGQV--GSGSTANQPTPRKVTNCLH 208
Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ VV CG + + GE+Y WG N NG LG+G
Sbjct: 209 IKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 245
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 322 (118.4 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 89/271 (32%), Positives = 131/271 (48%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A++ DG+LY WG N+ GQ+G G A + P P
Sbjct: 114 QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP + L GV + A G+ H+ + + G +Y +G ++ GN + + S + +
Sbjct: 223 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPLQIM 280
Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
E VV C HT T G++Y WG
Sbjct: 281 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 299 (110.3 bits), Expect = 5.7e-26, P = 5.7e-26
Identities = 81/225 (36%), Positives = 121/225 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 99 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQLTPC--RVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
L+ ++ E E V V+IAA H SA ++G+VY++G
Sbjct: 276 PLQ--------IMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 223 (83.6 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 73/248 (29%), Positives = 111/248 (44%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH-HSSAITVD 141
++ T V+ GLN LG ++ ++ P ++ L K++ +S G H T D
Sbjct: 35 IYTTHNDEVFVFGLNCSNCLGTGDSQS-TIVPKKLEALCGKKISSLSYGSGPHVLLCTED 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVL 199
GE+Y WG N QLG G V P+ C + + K + A G S+A++ G +
Sbjct: 94 GEVYAWGHNGYSQLGNGATNQGVTPVQV---CTNLLLKKVIEVACGSHHSMALSFDGDLY 150
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGR 258
+WG G++G G + ++ TPR + L+ V A G S + NG
Sbjct: 151 AWGYNNCGQVGSGS---------TANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGE 201
Query: 259 VYIFGDRAVDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G ++ L GN P ++ L ++ CG HT LT G LY WG+N
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLT-PCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGAN 260
Query: 316 ENGCLGIG 323
G LG G
Sbjct: 261 TYGQLGTG 268
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 52/138 (37%), Positives = 74/138 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N L PL+I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 265 LGTG-NKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFACTDDVF 333
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 322 (118.4 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 89/270 (32%), Positives = 126/270 (46%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 284 (105.0 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 73/225 (32%), Positives = 116/225 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 242 (90.2 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 86/280 (30%), Positives = 130/280 (46%)
Query: 59 RWRPV--VCSAFEKHSL-KALACGGA--HTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
+W P+ + S E S+ KA G + L++T++ V+ GLN LG +N +L
Sbjct: 6 KW-PIFTLLSPHEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHS-TL 63
Query: 114 EPLRISGL-KKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
P ++ L K++ +S G H T DG +Y WG N QLG G + PI
Sbjct: 64 VPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQV-- 121
Query: 172 ECLSGIFTKQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
C + + KQ A G S+A+ G+V +WG G++G G + ++ T
Sbjct: 122 -C-TNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGS---------TANQPT 170
Query: 229 PRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISK 286
PR + +K + A G S + +NG VY +G ++ L GN P ++
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-PVRVAA 229
Query: 287 LPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +S ++VCG HT LT G LY WG+N G LG G
Sbjct: 230 L-HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Score = 190 (71.9 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 45/114 (39%), Positives = 63/114 (55%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQ 154
LG N L P I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTG-NKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ 316
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 327 (120.2 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 83/268 (30%), Positives = 134/268 (50%)
Query: 44 GNGDYGRLGLGSLESRWRPVV-CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQ
Sbjct: 53 GDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQ 112
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 113 LGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNL 172
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P KV+ L GI Q A G S A++ G WG SG+L S+
Sbjct: 173 CSQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA----- 226
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
++ Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ + P
Sbjct: 227 KAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGP 286
Query: 282 SLISKLP-YSEEVVCGGYHTC--VLTSG 306
LI + + ++ CG YHT V T+G
Sbjct: 287 QLIEGIGGHVSQIECGSYHTIAYVYTTG 314
Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 83/255 (32%), Positives = 131/255 (51%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGIS--ENIGYSLEPLR-ISGLKKEVVQIS 129
LKA A G H+L L VY+ G N GQLG ++ EP++ +S + ++V S
Sbjct: 31 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLV--S 87
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S
Sbjct: 88 CGKEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHS 146
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG H
Sbjct: 147 LALSEDGQVFSWGSNRQGQLGLGNNLC--------SQASPQKVKSLEGIPLAQVAAGGTH 198
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR-----RPSLISKLPYSEEVV--CGGYHTCV 302
S + G + +G+ ++ GN A+ +P I L V CG HT V
Sbjct: 199 SFALSLMGTSFGWGNNRSGQLALS-GNSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSV 257
Query: 303 LTSGGELYTWGSNEN 317
LT G+++T+G + +
Sbjct: 258 LTEDGQVFTFGGSSS 272
Score = 237 (88.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 65/225 (28%), Positives = 108/225 (48%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 105 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 164
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L
Sbjct: 165 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 224
Query: 161 AAKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+AK I P + L + + G+E + +T G+V ++G S +L H S
Sbjct: 225 SAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRG 284
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+LI+ + G +I + A + G+V G
Sbjct: 285 G---------PQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 320
Score = 229 (85.7 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 64/216 (29%), Positives = 111/216 (51%)
Query: 114 EPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK-V 171
+P R+ +G ++++ ++G HS + + +Y G NS GQLG +K+ + P + +
Sbjct: 18 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEEPI 75
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ LS + + G E SVAV G+V +WGAG G+LG G ES + F+ P
Sbjct: 76 QALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIG-ESKEISFM-------PTK 127
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
I L G+K+ + G HS + E+G+V+ +G ++ L + + + SL
Sbjct: 128 INSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-EG 186
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+P ++ V GG H+ L+ G + WG+N +G L +
Sbjct: 187 IPLAQ-VAAGGTHSFALSLMGTSFGWGNNRSGQLAL 221
Score = 158 (60.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 46/159 (28%), Positives = 78/159 (49%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++E +G+ +AA G S+ + +V S G G+LG Q+S +ST
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSP-----QSTKR- 70
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RPSLISK 286
I+ L V + + + G HS + GRV+ +G + ++ E P+ I+
Sbjct: 71 PEEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 130
Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + +V CG YH+ L+ G++++WGSN G LG+G
Sbjct: 131 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 169
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 326 (119.8 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 90/285 (31%), Positives = 139/285 (48%)
Query: 46 GDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--------ACGGAHTLFLTETGCVYATGL 97
GD GR G L R P CSA K ++AL +CG H+L + G V+A G
Sbjct: 48 GDNGR---GQLGQRGAP--CSAQLKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGA 102
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQLG E +L P++I L ++ Q+S G++HS A++ G+++ WG NS+GQLG
Sbjct: 103 GSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLG 162
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LGKK P +V L GI Q A G S A++ G WG +G+L +++
Sbjct: 163 LGKKFPSQAS-PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLAL-HKNN 220
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ G Y P I L+ + V + G+ H+ + +NG+V+ FGD ++
Sbjct: 221 VSG-----QSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTA 275
Query: 277 HARRPSLISKLP-YSEEVVCGGYHTCVLT-SGGELYTWGSNENGC 319
P L+ + ++ CG YHT + G++ ++G E C
Sbjct: 276 EKSGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG-REPTC 319
Score = 303 (111.7 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 85/257 (33%), Positives = 132/257 (51%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKK-EVVQIST 130
L+ A G H+L L G V++ G N GQLG S + RI L+ V +S
Sbjct: 25 LRQAASGERHSLLLLSNGQVHSCGDNGRGQLG-QRGAPCSAQLKERIRALETLHVDLVSC 83
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-KAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG G+ K +IP+ K++ L+ I KQ + G S
Sbjct: 84 GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPM--KIKTLNDIKIKQVSCGHYHS 141
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A++ GG+V SWG+ G+LG G++ F S+ +P+ ++ L+G+ + AAG H
Sbjct: 142 LALSEGGQVFSWGSNSDGQLGLGKK-----F---PSQASPQRVRSLDGIPLAQVAAGGAH 193
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV--CGGYHTCVLT 304
S + +G + +G ++ + N + +P IS L + CG HT VLT
Sbjct: 194 SFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLT 253
Query: 305 SGGELYTWGSNENGCLG 321
G+++T+G N G LG
Sbjct: 254 QNGKVFTFGDNTYGQLG 270
Score = 258 (95.9 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 68/230 (29%), Positives = 110/230 (47%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG G E+ P+ +K ++CG H+L L+E G V++
Sbjct: 96 RVFA--WGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSW 153
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L + Q++ G HS A+++ G + WG+N+ GQ
Sbjct: 154 GSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQ 213
Query: 155 LGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L K P + L + + G+E +V +T GKV ++G G+LGH
Sbjct: 214 LALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSP 273
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 274 TAEKSG---------PQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 314
Score = 219 (82.2 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 57/203 (28%), Positives = 97/203 (47%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + +G+++ G N GQLG + A + ++ L + +
Sbjct: 24 ELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQ-RGAPCSAQLKERIRALETLHVDLVS 82
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ + T+ P IK L +K+K
Sbjct: 83 CGKEHSLAVCHKGRVFAWGAGSEGQLGTGE-------FKETN-LIPMKIKTLNDIKIKQV 134
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + E G+V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 135 SCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQ-VAAGGAH 193
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
+ L+ G + WG N G L +
Sbjct: 194 SFALSLSGTSFGWGRNNAGQLAL 216
Score = 211 (79.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 66/192 (34%), Positives = 98/192 (51%)
Query: 17 DIKLGSKLGICKRWISSTLQRRFAAL-WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLK 74
DIK+ K C + S L WG+ G+LGLG S+ P + + L
Sbjct: 128 DIKI--KQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLA 185
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISEN--IGYSLEPLRISGLKK-EVVQISTG 131
+A GGAH+ L+ +G + G N+ GQL + +N G S +P IS LK V+ IS G
Sbjct: 186 QVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCG 245
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
Y H+ +T +G+++ +G N+ GQLG A K P VE + G+ + Q G ++A
Sbjct: 246 YEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEK--SGPQLVEGIDGLVS-QIDCGSYHTLA 302
Query: 192 -VTGGGKVLSWG 202
V GKV+S+G
Sbjct: 303 YVYTTGKVVSFG 314
Score = 174 (66.3 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 51/163 (31%), Positives = 84/163 (51%)
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P+ + L G+ +QAA G S+ + G+V S G G G+LG Q + ++
Sbjct: 12 PVSRRRVGLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLG--QRGA-----PCSA 64
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPS 282
+ R I+ LE + V + + G HS + GRV+ +G + ++ F+E N P
Sbjct: 65 QLKER-IRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI--PM 121
Query: 283 LISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
I L ++V CG YH+ L+ GG++++WGSN +G LG+G
Sbjct: 122 KIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLG 164
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 323 (118.8 bits), Expect = 3.7e-28, P = 3.7e-28
Identities = 105/295 (35%), Positives = 152/295 (51%)
Query: 22 SKLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALAC 78
+KL +C R + T + A GN + G+LGLG E R + S F +H +K LA
Sbjct: 91 TKLAVCGRNHTLVYTEKGNVYAAGGNSE-GQLGLGDTEERTTFHLISFFTNQHKIKQLAA 149
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
G + +TE G ++ G N GQ+G+++ S+ P ++ + K V IS GY+HS+ I
Sbjct: 150 GSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSV-PCQVD-VGKPVSSISCGYYHSAFI 207
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGG 196
T DGELY +G+ NG+LGL + K +P V GI K + A G E +V +T G
Sbjct: 208 TGDGELYTFGEPENGKLGLLPEQLKNSRVPQPV---LGIMEKVNKVACGGEHTVVLTETG 264
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI-D- 254
V ++G G G+LGHG L TS P+ +K L K+ G H+A I D
Sbjct: 265 -VYTFGLGQYGQLGHGT------LLFKTS--VPKSVKHLRSHKIHNVTCGESHTAVIADT 315
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK-LPYSEEVV-CGGYHTCVLTS 305
ENG ++ FGD K+ E N A + P+L S L ++ +V CGG H V +
Sbjct: 316 ENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVFAT 370
Score = 316 (116.3 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 95/292 (32%), Positives = 145/292 (49%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLGS + +P A + K CG HTL TE G VYA G N G
Sbjct: 60 MFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 119
Query: 102 QLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ + + L IS + + Q++ G + S+A+T DG+L++WG NS GQ+GL
Sbjct: 120 QLGLGDTEERTTFHL-ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLAD 178
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ G + G+ S +TG G++ ++G +G+LG E
Sbjct: 179 KTC--VSVPCQVDV--GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ---- 230
Query: 220 FLRSTSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----DRAVDKMLFQ 273
L+++ P L I E KV A G H+ + E G VY FG +LF+
Sbjct: 231 -LKNSRVPQPVLGIME----KVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFK 284
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVL--TSGGELYTWGSNENGCLGIG 323
L S ++ V CG HT V+ T G ++T+G +G LG+G
Sbjct: 285 TSVPKSVKHLRSHKIHN--VTCGESHTAVIADTENGLMFTFGDGRHGKLGLG 334
Score = 270 (100.1 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 84/258 (32%), Positives = 126/258 (48%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
++CG HT +T G +Y G ND+GQLG+ S+N +P + LK E +++ G +
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNT--VRKPTCVKALKPEKTKLAVCGRN 99
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
H+ T G +Y G NS GQLGLG + T +S FT KQ A G
Sbjct: 100 HTLVYTEKGNVYAAGGNSEGQLGLGDTEER-----TTFHLIS-FFTNQHKIKQLAAGSYT 153
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S AVT G++ WG G++G ++ + P + G V + G+
Sbjct: 154 SAAVTEDGQLFVWGDNSEGQIGLADKTCVS---------VPCQVDV--GKPVSSISCGYY 202
Query: 249 HSACIDENGRVYIFGDRAVDKM--LFQEGNHARRPS-LISKLPYSEEVVCGGYHTCVLTS 305
HSA I +G +Y FG+ K+ L ++ ++R P ++ + +V CGG HT VLT
Sbjct: 203 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTE 262
Query: 306 GGELYTWGSNENGCLGIG 323
G +YT+G + G LG G
Sbjct: 263 TG-VYTFGLGQYGQLGHG 279
Score = 260 (96.6 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 75/235 (31%), Positives = 113/235 (48%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
E+G V+ FG+ +ENI P + + V IS G H++ +T +G+LYM+
Sbjct: 12 ESGAVFT-----FGKSNFAENI-----PSKFWFKNDKPVHISCGDEHTAVVTGNGKLYMF 61
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N GQLGLG K + PT V+ L TK A G ++ T G V + G G
Sbjct: 62 GSNDWGQLGLGSK--NTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 119
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G F S +T + K+K AAG SA + E+G+++++GD +
Sbjct: 120 QLGLGDTEERTTF-HLISFFTNQH-------KIKQLAAGSYTSAAVTEDGQLFVWGDNSE 171
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ + P + + CG YH+ +T GELYT+G ENG LG+
Sbjct: 172 GQIGLADKTCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGL 226
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 319 (117.4 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 87/279 (31%), Positives = 135/279 (48%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G G LGLG ++S P + + L+ G G H + T G V+ G N + Q
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ 130
Query: 103 LGISENIGYSLEPLRIS-GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + L P IS L K+V++++ G +HS +T DGE++ WG N++GQ+G G
Sbjct: 131 LG-NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGST 189
Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ PIP +V CL A G +AV G+V WG G+G+LG G
Sbjct: 190 VNQ--PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN------ 241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S ++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN +
Sbjct: 242 ---SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSN 296
Query: 280 R----PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ P + K E C HT T GG +Y WG
Sbjct: 297 QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 301 (111.0 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 77/225 (34%), Positives = 117/225 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + + P R++G K VV I+ G A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTVNQPI-PRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGN 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G +S+
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN--- 296
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
S TP + E + + ++IAA H SA + G VY++G
Sbjct: 297 ----QSYPTPVTV-EKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 259 (96.2 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 86/298 (28%), Positives = 137/298 (45%)
Query: 45 NGDYGR---LGLGSLE----SRWRPV--VCSAFEKHSLKALAC----GGAHTLFLTETGC 91
+GD G+ L SL+ +W P+ +CS E ++ AC G L+ T
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKW-PIFSLCSEEELQLIRQ-ACVFGSAGNEVLYTTVNDE 66
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH-HSSAITVDGELYMWGK 149
++ G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG
Sbjct: 67 IFVLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGH 125
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N+ QLG G ++P LS + A G S+ +T G+V +WG SG++
Sbjct: 126 NAYSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQV 184
Query: 210 GHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
G G + ++ PR + L+ V A G + + + G VY++G
Sbjct: 185 GSGS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNG 235
Query: 269 KM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L GN P ++ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 236 QLGLGNSGNQPT-PCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 188 (71.2 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 47/139 (33%), Positives = 73/139 (52%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 318 (117.0 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 87/270 (32%), Positives = 126/270 (46%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 282 (104.3 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 73/225 (32%), Positives = 114/225 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVGSGSTTNQPT-PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 246 (91.7 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 79/250 (31%), Positives = 117/250 (46%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH-HSSAITVD 141
L++T+ V+ GLN LG +N +L P ++ L K++ +S G H T D
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQS-TLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKV 198
G +Y WG N QLG G + PI C + + KQ A G S+A+ G+V
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQV---C-TNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENG 257
+WG G++G G +T++ TPR + +K + A G S + +NG
Sbjct: 150 FAWGYNNCGQVGSGS---------TTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWG 313
VY +G ++ L GN P ++ L +S ++VCG HT LT G LY WG
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLT-PVRVAAL-HSVCVNQIVCGYAHTLALTDEGLLYAWG 258
Query: 314 SNENGCLGIG 323
+N G LG G
Sbjct: 259 ANTYGQLGTG 268
Score = 195 (73.7 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 51/138 (36%), Positives = 71/138 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTG-NKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333
Score = 182 (69.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 59/215 (27%), Positives = 102/215 (47%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + ++P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V+V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQV--VEV---ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 325 (119.5 bits), Expect = 4.6e-28, P = 4.6e-28
Identities = 82/279 (29%), Positives = 140/279 (50%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWGSNENGC 319
L+ ++ ++ CG HT + + G++ ++G GC
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFGRGP-GC 318
Score = 315 (115.9 bits), Expect = 5.4e-27, P = 5.4e-27
Identities = 90/265 (33%), Positives = 133/265 (50%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
VC+ ++L A G H+L L G V + G N GQLG + +P RI L+
Sbjct: 18 VCAG--GNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALET 74
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
V +S G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q
Sbjct: 75 LNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQV 133
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G SVA++ G+V SWG G+LG G+E F S+ +P+ ++ LEG+ +
Sbjct: 134 ACGHYHSVALSEDGQVFSWGTNSHGQLGLGKE-----F---PSQASPQRVRSLEGIPLAQ 185
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSE--EVVCG 296
AAG HS + +G + +G + ++ GN+A +P I L + CG
Sbjct: 186 VAAGGHHSFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCG 244
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G+++T+G N G LG
Sbjct: 245 YKHTAVLTQDGKVFTFGDNSYGQLG 269
Score = 257 (95.5 bits), Expect = 8.6e-21, P = 8.6e-21
Identities = 71/231 (30%), Positives = 112/231 (48%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G+LG+G E+ + P + +ACG H++ L+E G V++
Sbjct: 95 RVFA--WGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HHS A+++ G + WG NS GQ
Sbjct: 153 GTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L A V P + L + + G++ + +T GKV ++G G+LGH
Sbjct: 213 LALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
+ G P+L++ +EG+ +I G H+ A I G+V FG
Sbjct: 273 TAEKRG---------PQLVERIEGLVSQIDC-GSDHTLAYIYTTGQVVSFG 313
Score = 246 (91.7 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHT 300
G HS + E+G+V+ +G + ++ L +E P + L P ++ V GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193
Query: 301 CVLTSGGELYTWGSNENGCLGI 322
L+ G + WGSN G L +
Sbjct: 194 FALSLSGTSFGWGSNSAGQLAL 215
Score = 225 (84.3 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 69/201 (34%), Positives = 103/201 (51%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAG-G-SGRLGH-GQE 214
A K P VE + G+ + Q G + ++A + G+V+S+G G G + R H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328
Query: 215 SSILGFLRSTSEYTPRLIKEL 235
SS + L S + +K +
Sbjct: 329 SSDISCLVSAKDLADVQVKHI 349
Score = 157 (60.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 47/161 (29%), Positives = 72/161 (44%)
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P+ + C G QAA G S+ + G V S G G+LG G R
Sbjct: 12 PLRERQVCAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRK------GTPRGEQ 65
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLI 284
P I LE + V + + G HS + GRV+ +G + ++ E P I
Sbjct: 66 ---PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI 122
Query: 285 SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + +V CG YH+ L+ G++++WG+N +G LG+G
Sbjct: 123 KTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLG 163
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 325 (119.5 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 81/273 (29%), Positives = 135/273 (49%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCVLT-SGGELYTWG 313
L+ ++ ++ CG YHT + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 272 (100.8 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 80/252 (31%), Positives = 122/252 (48%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E F S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKE-----F---PSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L V CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 231 (86.4 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 65/230 (28%), Positives = 106/230 (46%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L G+ P V L + + G + +T GKV ++G SG+LG+
Sbjct: 213 LALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+L++ ++G+ +I + A + G+V FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 221 (82.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 58/203 (28%), Positives = 100/203 (49%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ L +E P + L P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLAL 215
Score = 202 (76.2 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 60/169 (35%), Positives = 88/169 (52%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGS 206
K P VE + G+ + Q G ++A V G+V+S+G G S
Sbjct: 272 PTPEK--RGPQLVERIDGLVS-QIDCGSYHTLAYVHTTGQVVSFGHGPS 317
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/146 (29%), Positives = 69/146 (47%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
QAA G S+ + +VLS G G+LG + + G L P I+ LE + V
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGEL-------PEPIQALETLIV 77
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RPSLISKLPYSE--EVVCGG 297
+ + G HS + GRV+ +G + ++ E P I L + +V CG
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
YH+ L+ ++++WG N +G LG+G
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLG 163
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 317 (116.6 bits), Expect = 5.7e-28, P = 5.7e-28
Identities = 87/270 (32%), Positives = 126/270 (46%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 285 (105.4 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 75/225 (33%), Positives = 116/225 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 248 (92.4 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 81/262 (30%), Positives = 121/262 (46%)
Query: 74 KALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
KA G + L++T+ V+ GLN LG +N +L P ++ GL K++ +S
Sbjct: 23 KACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQS-TLVPKKLEGLCGKKIKSLSY 81
Query: 131 GYH-HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGF 186
G H T DG +Y WG N QLG G + P+ C + + KQ A G
Sbjct: 82 GSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV---C-TNLLIKQVVEVACGS 137
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AA 245
S+A+ G+V +WG G++G G + ++ TPR + +K + A
Sbjct: 138 HHSMALAADGEVFAWGYNNCGQVGSGS---------TANQPTPRKVTNCLHIKRVVGIAC 188
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS---EEVVCGGYHTC 301
G S + +NG VY +G ++ L GN P ++ L +S ++VCG HT
Sbjct: 189 GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT-PVRVAAL-HSVCVNQIVCGYAHTL 246
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LT G LY WG+N G LG G
Sbjct: 247 ALTDEGLLYAWGANTYGQLGTG 268
Score = 194 (73.4 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 50/138 (36%), Positives = 71/138 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTG-NKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 316 (116.3 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 99/322 (30%), Positives = 159/322 (49%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP V G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS R++ E V +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRSPQ----RVLGIPERV-IQVACGGG- 253
Query: 249 HSACIDENGRVYIFG-----DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 254 HTVVLTEKV-VYAFGLGQFGQLGLGTFLFETSE----PKIIERIKDQKICHISCGENHTA 308
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330
Score = 168 (64.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 55/209 (26%), Positives = 99/209 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G++GL + P + + S ++CG H+ F+T G +Y G + G
Sbjct: 163 MWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHSAFVTMDGELYTFGEPENG 220
Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG+ +E + P R+ G+ + V+Q++ G H+ +T + +Y +G GQLGLG
Sbjct: 221 KLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLT-EKVVYAFGLGQFGQLGLGTF 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E + + G + +T G + ++G G G+LG G E+ F
Sbjct: 280 LFETSE-PKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMEN----F 334
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
T+++ P L V++ A G H
Sbjct: 335 ---TNQFFPTLCSNFLRFAVQLIACGGCH 360
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 315 (115.9 bits), Expect = 4.9e-27, P = 4.9e-27
Identities = 96/295 (32%), Positives = 136/295 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
WG GRLG G P + F +++ CG HT +T +G +YA G D
Sbjct: 323 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 382
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG+ + +P+RI G + + IS G H++ +T +G+L+ +G + G LG G
Sbjct: 383 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 441
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
+ + IP +VE L+G T +AA G S AV T GK+ +WG G GRLGH
Sbjct: 442 DRIST--NIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 499
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G L P + EL+ + A G + + +G+VY G D
Sbjct: 500 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMG--TADP-- 546
Query: 272 FQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ R PS I + +EV CG +H VL S E+YTWG NG LG G
Sbjct: 547 --SHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHG 599
Score = 242 (90.2 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 79/277 (28%), Positives = 130/277 (46%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+GD+ G LGLGS S W+PV + E +KA++CG HT F+T G ++ G
Sbjct: 375 WGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGT 434
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAI-------TVDGELYMWGKNS 151
FG LG + I ++ P + L ++ + G HS+A+ T G+L+ WG
Sbjct: 435 FGALGHGDRISTNI-PREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGD 493
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFT---KQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+G+LG G ++IP C++ + T +Q A G +VA++ G+V + G
Sbjct: 494 DGRLGHGDIECRLIP-----SCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPS- 547
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
H +R+ S L K V+ A GF H A ++ VY +G +
Sbjct: 548 --HD-------IVRAPSCIEGGLGKSF----VQEVACGFHHIAVLNSKAEVYTWGKGSNG 594
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
++ + + P+L+ L + +VVCG +T +
Sbjct: 595 QLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 233 (87.1 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 75/266 (28%), Positives = 124/266 (46%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P V + ++++CG + + +T+ G +Y+ G G+LG Y P I
Sbjct: 290 PKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV-CSYVPHPKLIDEF 348
Query: 122 KKEVVQIST-GYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIF 178
V+++ G H+ A+T G+LY WG + G LGLG A+ P+ + + GI+
Sbjct: 349 NGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIY 407
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
K + G + VT GK+ ++G G G LGHG S T+ PR ++ L G
Sbjct: 408 VKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRIS-------TN--IPREVEALNGC 458
Query: 239 KVKIAAAGFLHSACI-------DENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYS 290
+ AA G HSA + +G+++ +GD D L R PS +++L +
Sbjct: 459 RTIKAACGVWHSAAVVSVFGEATSSGKLFTWGD-GDDGRLGHGDIECRLIPSCVTELDTT 517
Query: 291 --EEVVCGGYHTCVLTSGGELYTWGS 314
++V CG T L+ G++Y G+
Sbjct: 518 SFQQVACGQSITVALSMSGQVYAMGT 543
Score = 226 (84.6 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 58/206 (28%), Positives = 99/206 (48%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
IS G +++ +T G++Y WG+ S G+LG G +P P ++ +G + A G
Sbjct: 304 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHG--VCSYVPHPKLIDEFNGSTVELADCGEF 361
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP-RLIKELEGVKVKIAAAG 246
+ AVT G + +WG G H + +LG S + P R++ ++EG+ VK + G
Sbjct: 362 HTCAVTASGDLYAWGDGD-----HN--AGLLGLGSGASHWKPVRILGQMEGIYVKAISCG 414
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGYHTCVL- 303
H+A + G+++ FGD + + P + L + CG +H+ +
Sbjct: 415 PWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 474
Query: 304 ------TSGGELYTWGSNENGCLGIG 323
TS G+L+TWG ++G LG G
Sbjct: 475 SVFGEATSSGKLFTWGDGDDGRLGHG 500
Score = 185 (70.2 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 53/194 (27%), Positives = 98/194 (50%)
Query: 143 ELYMWGKN-SNGQLGLGK----KAAKVIP---IPTKVECLSGIFTKQAALGFEQSVAVTG 194
++++WG++ +G LG G ++ ++ +P ++ + + + G +V VT
Sbjct: 257 DVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTK 316
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ SWG GRLGHG + ++ P+LI E G V++A G H+ +
Sbjct: 317 QGQMYSWGEESGGRLGHG----VCSYVPH-----PKLIDEFNGSTVELADCGEFHTCAVT 367
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHAR--RP-SLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
+G +Y +GD + L G+ A +P ++ ++ Y + + CG +HT +TS G+L
Sbjct: 368 ASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKL 427
Query: 310 YTWGSNENGCLGIG 323
+T+G G LG G
Sbjct: 428 FTFGDGTFGALGHG 441
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 323 (118.8 bits), Expect = 5.9e-27, P = 5.9e-27
Identities = 93/290 (32%), Positives = 143/290 (49%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4054 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4111
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4112 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4171 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4224
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4225 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4279
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4280 DGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4329
Score = 319 (117.4 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 96/294 (32%), Positives = 137/294 (46%)
Query: 39 FAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYAT 95
FA +G+G GRLG+G +S W P + + + +K +A GG H L LT G VYA
Sbjct: 4104 FATGYGSG--GRLGVGGSDS-WAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAW 4160
Query: 96 GLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G + G+LG + Y L ++G+ V I+ G HS+AIT G + WGK G
Sbjct: 4161 GEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGSAHSAAITASGHVLTWGKGRYG 4218
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGH 211
+LG G ++ P VE L G A G Q++ +T V SWG G G+LG
Sbjct: 4219 RLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGR 4276
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G G S P I+ L G+ V G S + ++G VY +G ++
Sbjct: 4277 G------G---SDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG 4327
Query: 272 FQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+H RRP ++ L + + G H + GE+YTWG N+ G LG G
Sbjct: 4328 HGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDG 4381
Score = 317 (116.6 bits), Expect = 7.7e-27, Sum P(2) = 7.7e-27
Identities = 93/306 (30%), Positives = 151/306 (49%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
L L + +Y +K K+ G K ++ TL + + WG G+ G+LG G+ + +
Sbjct: 3061 LPHQLPVLRQYVVK---KVAVHSG-GKHALALTLDGKVFS-WGEGEDGKLGHGNRTTLDK 3115
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A ++ +ACG +H+ ++ G +Y GL ++G+LG +N L+P ++ L
Sbjct: 3116 PRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTT-QLKPKLVTAL 3174
Query: 122 K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ VVQ++ G + A+T DG ++ WG G+LG G P ++E LSGI
Sbjct: 3175 AGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGS--DTPHEIERLSGIG 3232
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q G + S+A+T G+V +WG G RLGHG + + R P+ I L G
Sbjct: 3233 VVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV----RK-----PQPIGGLRGR 3283
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--RRPSLISKLP--YSEEVV 294
+V A G LH + + G+VY +GD D GN ++P+L+ L + V
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFVNKKPALVIGLDAVFVNRVA 3341
Query: 295 CGGYHT 300
CG H+
Sbjct: 3342 CGSSHS 3347
Score = 306 (112.8 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 91/287 (31%), Positives = 130/287 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 3104 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3162
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3163 TTQLKP--KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG------ 3214
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3215 G---SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3271
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P I L V G H +T G++Y WG N++G G G
Sbjct: 3272 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Score = 296 (109.3 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 82/270 (30%), Positives = 128/270 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4160 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + I+ G + IT D ++ WG G+LG G
Sbjct: 4220 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4277
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4278 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVR- 4335
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P+ + L+G K+ A G LH ++G VY +GD D+ +G
Sbjct: 4336 --------RPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDN--DEGQLGDGTVTA 4385
Query: 279 -RRPSLISKLP--YSEEVVCGGYHTCVLTS 305
+RP L++ L + +V CG HT L++
Sbjct: 4386 IQRPRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 288 (106.4 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 87/293 (29%), Positives = 144/293 (49%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P + L+ + GG+ +LF+ ++ G VYA G
Sbjct: 2990 VWGLNDKEQLG-GLKGSKVKVPTFSQTISR--LRPIHIAGGSKSLFIVSQDGKVYACGEG 3046
Query: 99 DFGQLG--ISENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+LG ++ N+ + L LR +KK V + +G H+ A+T+DG+++ WG+ +G+
Sbjct: 3047 TNGRLGLGVTHNVPLPHQLPVLRQYVVKK--VAVHSGGKHALALTLDGKVFSWGEGEDGK 3104
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + + P VE L + A G S A++ G++ +WG G GRLGHG
Sbjct: 3105 LGHGNRTT--LDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD- 3161
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLF 272
+T++ P+L+ L G +V A G + + E+G V+ +GD K+
Sbjct: 3162 --------NTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGR 3213
Query: 273 QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P I +L ++ CG + LT GE++TWG + LG G
Sbjct: 3214 GGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG 3266
Score = 256 (95.2 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 81/256 (31%), Positives = 120/256 (46%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYH 133
AL+ GGA T +Y G N GQLG E P L + V Q++ G
Sbjct: 4042 ALSWGGAST--------IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV-QLAGGEQ 4092
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVA 191
A+T DG+L+ G S G+LG+G + IP T + L +F K+ A+ G + +A
Sbjct: 4093 SLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIP--TLLGSLQHVFVKKVAVNSGGKHCLA 4150
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T G+V +WG G G+LGHG S + R P+L++ L G+ V A G HSA
Sbjct: 4151 LTTEGEVYAWGEGEDGKLGHGNRMS---YDR------PKLVEHLNGMSVADIACGSAHSA 4201
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYSE-EVVCGG--YHTCVLTSGG 307
I +G V +G ++ + RP L+ L Y ++ CG T +T
Sbjct: 4202 AITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDD 4261
Query: 308 ELYTWGSNENGCLGIG 323
+++WG + G LG G
Sbjct: 4262 NVWSWGDGDYGKLGRG 4277
Score = 229 (85.7 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 67/213 (31%), Positives = 97/213 (45%)
Query: 114 EPLRISGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
EPL + + +V G+ H AI + Y WG + +LG G A+ +P TK
Sbjct: 604 EPLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP--TK 661
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+ L + G S A+T GG +L+WG G RLGHG RS P
Sbjct: 662 IAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDD-----RSL----PT 712
Query: 231 LIKEL-EGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
L+ L + + V +A +G HS + G V+ +GD K+ N + +P L+ LP
Sbjct: 713 LVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP 772
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ V G + L+S G+LYTWG CLG
Sbjct: 773 RVQRVFAGSQFSVALSSEGQLYTWGKAT--CLG 803
Score = 222 (83.2 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 70/247 (28%), Positives = 116/247 (46%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
C G H L + Y+ G + +LG + ++ P +I+ L++ VQ + G +S+
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 681
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
AIT G L WG+ + +LG G + +PT V LS ALG S+A+T
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDR--SLPTLVVALSDHMVVDVALGSGDAHSLALTS 739
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG+G + G L+ P L++ L V+ A + F S +
Sbjct: 740 EGLVFAWGDGDYGKLGNGNCN---GSLQ------PILVESLPRVQRVFAGSQF--SVALS 788
Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
G++Y +G +++ + P L+S L + +V H L+S GE++
Sbjct: 789 SEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 848
Query: 311 TWGSNEN 317
WG N++
Sbjct: 849 GWGRNDS 855
Score = 222 (83.2 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 56/176 (31%), Positives = 88/176 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 752 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 809
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 810 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 865
Score = 211 (79.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 63/224 (28%), Positives = 108/224 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ RLG G +R P +A E+H ++++ CG +++ +T G + G + +
Sbjct: 640 WGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 699
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + SL L ++ VV ++ +G HS A+T +G ++ WG G+LG G
Sbjct: 700 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 759
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
+ PI VE L + ++ G + SVA++ G++ +WG LGH E S+ G
Sbjct: 760 NGSLQPI--LVESLPRV--QRVFAGSQFSVALSSEGQLYTWGKATC--LGHQLVERSVQG 813
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRL+ L+ ++ A H + +G V+ +G
Sbjct: 814 CS------VPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWG 851
Score = 193 (73.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 48/150 (32%), Positives = 72/150 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT G V+ G D+ +
Sbjct: 3203 WGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYR 3262
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +P I GL+ + V+ ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3263 LGHGGD-QHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTF 3321
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V P V L +F + A G S+A
Sbjct: 3322 --VNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 191 (72.3 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 62/204 (30%), Positives = 99/204 (48%)
Query: 128 ISTGYHHSSAITVDGEL----YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+ST H +A + +L +WG N QLG G K +KV +PT + +S + A
Sbjct: 2969 VSTS-HEEAAAAPEQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIA 3025
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + V+ GKV + G G +GRLG G ++ P ++++ KV +
Sbjct: 3026 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV-----PLPHQLP-VLRQYVVKKVAVH 3079
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--RPSLISKLPYSE--EVVCGGYH 299
+ G H+ + +G+V+ +G+ K+ GN +P L+ L + +V CG H
Sbjct: 3080 SGG-KHALALTLDGKVFSWGEGEDGKL--GHGNRTTLDKPRLVEALRAKKIRDVACGSSH 3136
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ ++S GELYTWG E G LG G
Sbjct: 3137 SAAISSQGELYTWGLGEYGRLGHG 3160
Score = 141 (54.7 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 47/159 (29%), Positives = 69/159 (43%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
ES P + F+ +K +AC L L++ G +Y +L E EPL
Sbjct: 561 ESAGVPTLSCRFQ---IKQVACCETQMLILSQEGKLYTW------RLAKPE-----AEPL 606
Query: 117 RISGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+ + +V G+ H AI + Y WG + +LG G A+ +P TK+
Sbjct: 607 PMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP--TKIAA 664
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
L + G S A+T GG +L+WG G RLGHG
Sbjct: 665 LEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHG 703
Score = 44 (20.5 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 23/74 (31%), Positives = 32/74 (43%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY--IFGDRAVDKMLFQEG 275
LGF+R+ S PRL EL L +E G VY + R + +L Q G
Sbjct: 2077 LGFIRAISGDCPRLCLELSTPGWLSHYLSLLEQPAGNEAG-VYRQLHCLRLLQLILAQWG 2135
Query: 276 --NHARRPSLISKL 287
R P+L+ +L
Sbjct: 2136 AEEEPRMPALVHQL 2149
Score = 41 (19.5 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 203 AGGSGRLGHGQESSILGFLRSTSEY 227
+ G G G G +LG L S Y
Sbjct: 1770 SSGGGSTGSGSSLHVLGQLNMISAY 1794
Score = 40 (19.1 bits), Expect = 7.7e-27, Sum P(2) = 7.7e-27
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 281 PSLISKLPYSEEVVCGGYH 299
P L+ + Y E V GG H
Sbjct: 3849 PELLRQYEYEEPQVRGGIH 3867
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 320 (117.7 bits), Expect = 8.6e-27, P = 8.6e-27
Identities = 94/311 (30%), Positives = 158/311 (50%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 1846 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 1900
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 1901 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 1959
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 1960 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 2017
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 2018 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 2068
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVV 294
A G LH + ++G+VY +GD D Q+GN R+P+L+ L + V
Sbjct: 2069 VHVAVGALHCLAVTDSGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLEGQKITRVA 2124
Query: 295 CGGYHTCVLTS 305
CG H+ T+
Sbjct: 2125 CGSSHSVAWTT 2135
Score = 314 (115.6 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 82/263 (31%), Positives = 128/263 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 2837 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 2896
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ G + + T D ++ WG G+LG G
Sbjct: 2897 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 2954
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 2955 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR- 3012
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3013 --------RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3064
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 3065 RPRLVAALQGKKVNRVACGSAHT 3087
Score = 310 (114.2 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 93/287 (32%), Positives = 130/287 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G ES P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 2784 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2843
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ EVV ++ G HS+ +T G+LY WGK G+LG
Sbjct: 2844 KLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 2902
Query: 161 AAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P VE L G + G Q++ +T V SWG G G+LG G
Sbjct: 2903 EDQLKP--KLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG------ 2954
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G S P I L G+ V G S + ++G VY +G ++ +H
Sbjct: 2955 G---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 3011
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP + L + + G H T GE+YTWG N+ G LG G
Sbjct: 3012 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3058
Score = 299 (110.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 92/292 (31%), Positives = 144/292 (49%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 2731 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 2787
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 2788 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 2845
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 2846 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 2901
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 2902 -------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 2954
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 2955 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3006
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 94/289 (32%), Positives = 134/289 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG + S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 1826 GEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 1884
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 1885 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 1943
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 1944 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG---- 1997
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 1998 --G---SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2052
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 2053 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 2101
Score = 279 (103.3 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 76/238 (31%), Positives = 118/238 (49%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 1829
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 1830 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 1888
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 1889 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1939
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 1940 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1997
Score = 277 (102.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 77/248 (31%), Positives = 118/248 (47%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 2719 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 2777
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 2778 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2835
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 2836 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 2886
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSN 315
Y +G ++ + +P L+ L ++ CG T LT +++WG
Sbjct: 2887 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 2946
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 2947 DYGKLGRG 2954
Score = 275 (101.9 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 84/291 (28%), Positives = 139/291 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VY+ G
Sbjct: 1772 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYSCGEAT 1829
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 1830 NGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 1889
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 1890 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 1944
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 1945 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 1998
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I +L ++ CG + LT G ++TWG + LG G
Sbjct: 1999 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 2049
Score = 242 (90.2 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 65/190 (34%), Positives = 96/190 (50%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1762 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 1819
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 1820 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 1873
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 1874 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 1933
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 1934 LGEYGRLGHG 1943
Score = 137 (53.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 2951 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 3008
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 3009 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 3067
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 3068 LVAALQGKKVNRVACGSAHTLA 3089
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 320 (117.7 bits), Expect = 8.7e-27, P = 8.7e-27
Identities = 94/311 (30%), Positives = 158/311 (50%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 1846 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 1900
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 1901 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 1959
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 1960 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 2017
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 2018 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 2068
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVV 294
A G LH + ++G+VY +GD D Q+GN R+P+L+ L + V
Sbjct: 2069 VHVAVGALHCLAVTDSGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLEGQKITRVA 2124
Query: 295 CGGYHTCVLTS 305
CG H+ T+
Sbjct: 2125 CGSSHSVAWTT 2135
Score = 314 (115.6 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 82/263 (31%), Positives = 128/263 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 2873 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 2932
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ G + + T D ++ WG G+LG G
Sbjct: 2933 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 2990
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 2991 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR- 3048
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3049 --------RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3100
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 3101 RPRLVAALQGKKVNRVACGSAHT 3123
Score = 310 (114.2 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 93/287 (32%), Positives = 130/287 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G ES P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 2820 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2879
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ EVV ++ G HS+ +T G+LY WGK G+LG
Sbjct: 2880 KLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 2938
Query: 161 AAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P VE L G + G Q++ +T V SWG G G+LG G
Sbjct: 2939 EDQLKP--KLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG------ 2990
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G S P I L G+ V G S + ++G VY +G ++ +H
Sbjct: 2991 G---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 3047
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP + L + + G H T GE+YTWG N+ G LG G
Sbjct: 3048 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3094
Score = 299 (110.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 92/292 (31%), Positives = 144/292 (49%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 2767 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 2823
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 2824 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 2881
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 2882 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 2937
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 2938 -------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 2990
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 2991 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3042
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 94/289 (32%), Positives = 134/289 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG + S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 1826 GEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 1884
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 1885 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 1943
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 1944 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG---- 1997
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 1998 --G---SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2052
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 2053 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 2101
Score = 279 (103.3 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 76/238 (31%), Positives = 118/238 (49%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 1829
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 1830 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 1888
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 1889 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1939
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 1940 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1997
Score = 277 (102.6 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 77/248 (31%), Positives = 118/248 (47%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 2755 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 2813
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 2814 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2871
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 2872 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 2922
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSN 315
Y +G ++ + +P L+ L ++ CG T LT +++WG
Sbjct: 2923 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 2982
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 2983 DYGKLGRG 2990
Score = 275 (101.9 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 84/291 (28%), Positives = 139/291 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VY+ G
Sbjct: 1772 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYSCGEAT 1829
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 1830 NGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 1889
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 1890 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 1944
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 1945 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 1998
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I +L ++ CG + LT G ++TWG + LG G
Sbjct: 1999 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 2049
Score = 242 (90.2 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 65/190 (34%), Positives = 96/190 (50%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1762 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 1819
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 1820 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 1873
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 1874 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 1933
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 1934 LGEYGRLGHG 1943
Score = 137 (53.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 2987 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 3044
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 3045 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 3103
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 3104 LVAALQGKKVNRVACGSAHTLA 3125
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 320 (117.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 94/311 (30%), Positives = 158/311 (50%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 2981 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3035
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3036 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3094
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3095 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3152
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3153 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3203
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVV 294
A G LH + ++G+VY +GD D Q+GN R+P+L+ L + V
Sbjct: 3204 VHVAVGALHCLAVTDSGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLEGQKITRVA 3259
Query: 295 CGGYHTCVLTS 305
CG H+ T+
Sbjct: 3260 CGSSHSVAWTT 3270
Score = 314 (115.6 bits), Expect = 5.1e-26, P = 5.1e-26
Identities = 82/263 (31%), Positives = 128/263 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4008 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4067
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ G + + T D ++ WG G+LG G
Sbjct: 4068 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4126 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR- 4183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4184 --------RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4235
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4236 RPRLVAALQGKKVNRVACGSAHT 4258
Score = 310 (114.2 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 93/287 (32%), Positives = 130/287 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G ES P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4014
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ EVV ++ G HS+ +T G+LY WGK G+LG
Sbjct: 4015 KLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 4073
Query: 161 AAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P VE L G + G Q++ +T V SWG G G+LG G
Sbjct: 4074 EDQLKP--KLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG------ 4125
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G S P I L G+ V G S + ++G VY +G ++ +H
Sbjct: 4126 G---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4182
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP + L + + G H T GE+YTWG N+ G LG G
Sbjct: 4183 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4229
Score = 304 (112.1 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 94/292 (32%), Positives = 137/292 (46%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 406 EKRFLILSRNGRVYTQAYNS--DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 463
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 464 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 522
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 523 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 581 GKLGRG------G---SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 631
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
++ H R P L+ L + +V G H LT E+++WGSN+
Sbjct: 632 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 683
Score = 299 (110.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 92/292 (31%), Positives = 144/292 (49%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3902 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 3958
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 3959 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4016
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4017 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4072
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 4073 -------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4125
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4126 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4177
Score = 297 (109.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 94/289 (32%), Positives = 134/289 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG + S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 2961 GEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3019
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3020 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3078
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3079 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG---- 3132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3133 --G---SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3187
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3188 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3236
Score = 279 (103.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 76/238 (31%), Positives = 118/238 (49%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2905 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 2964
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2965 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3023
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3024 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3074
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3075 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3132
Score = 277 (102.6 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 77/248 (31%), Positives = 118/248 (47%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 3948
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 3949 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4006
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 4007 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4057
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSN 315
Y +G ++ + +P L+ L ++ CG T LT +++WG
Sbjct: 4058 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4117
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 4118 DYGKLGRG 4125
Score = 275 (101.9 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 84/291 (28%), Positives = 139/291 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VY+ G
Sbjct: 2907 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYSCGEAT 2964
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 2965 NGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3024
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3025 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3079
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3080 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3133
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I +L ++ CG + LT G ++TWG + LG G
Sbjct: 3134 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3184
Score = 272 (100.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 86/278 (30%), Positives = 127/278 (45%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ L P + GL
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-------SD----MLAPQLVQGL 436
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 492
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 601 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 638
Score = 242 (90.2 bits), Expect = 8.3e-19, Sum P(2) = 8.3e-19
Identities = 65/190 (34%), Positives = 96/190 (50%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2897 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2954
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3008
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3009 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3068
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3069 LGEYGRLGHG 3078
Score = 137 (53.3 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4122 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4179
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4180 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4238
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4239 LVAALQGKKVNRVACGSAHTLA 4260
Score = 38 (18.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
+G+GSL ++ +VC+ A + + E CV
Sbjct: 1027 MGVGSLLKKYTALVCTHIGDILPVAASIASSSWQHFAEVACV 1068
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 320 (117.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 94/311 (30%), Positives = 158/311 (50%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 3037 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3091
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3092 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3150
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3151 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3208
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3209 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3259
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVV 294
A G LH + ++G+VY +GD D Q+GN R+P+L+ L + V
Sbjct: 3260 VHVAVGALHCLAVTDSGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLEGQKITRVA 3315
Query: 295 CGGYHTCVLTS 305
CG H+ T+
Sbjct: 3316 CGSSHSVAWTT 3326
Score = 315 (115.9 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 83/263 (31%), Positives = 128/263 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ G + + T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR- 4238
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4239 --------RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 309 (113.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 94/287 (32%), Positives = 130/287 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G ES P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ EVV ++ G HS+ +T G+LY WGK G+LG
Sbjct: 4070 KLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 4128
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P VE L G A G Q++ +T V SWG G G+LG G
Sbjct: 4129 EDQLKP--KLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG------ 4180
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G S P I L G+ V G S + ++G VY +G ++ +H
Sbjct: 4181 G---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4237
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP + L + + G H T GE+YTWG N+ G LG G
Sbjct: 4238 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 305 (112.4 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 94/292 (32%), Positives = 137/292 (46%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 460 EKRFLILSRNGRVYTQAYNS--DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 517
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 518 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 577 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 635 GKLGRG------G---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 685
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
++ H R P L+ L + +V G H LT E+++WGSN+
Sbjct: 686 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 737
Score = 299 (110.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 92/292 (31%), Positives = 144/292 (49%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 4013
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4014 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4071
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4072 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4127
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 4128 -------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4181 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 298 (110.0 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 98/308 (31%), Positives = 142/308 (46%)
Query: 25 GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GG 80
G K + T++ + A G GRLGLG + S P+ +A + +K +A GG
Sbjct: 2999 GGSKSLFAVTVEGKVYAC-GEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGG 3056
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT 139
H LT G V++ G D G+LG + +P I LK K + I+ G HS+A+T
Sbjct: 3057 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGK 197
GELY WG G+LG G ++ P KV L G Q A G Q++A+T G
Sbjct: 3116 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G G S P+ I+ L G V G S + ++G
Sbjct: 3174 VFSWGDGDFGKLGRG------G---SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
V+ +G ++ H R+P ++ L + V G H +T G++Y WG N
Sbjct: 3225 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDN 3284
Query: 316 ENGCLGIG 323
++G G G
Sbjct: 3285 DHGQQGNG 3292
Score = 279 (103.3 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 82/266 (30%), Positives = 132/266 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRA--VDKM 270
+ Y P+L++ L+G KV AAG H + E+ V+ +G D+ D +
Sbjct: 695 EHV--------RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 745
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCG 296
+ A P L +K + + CG
Sbjct: 746 RVTKPEPAALPGLDTK--HIVGIACG 769
Score = 277 (102.6 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 76/238 (31%), Positives = 118/238 (49%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188
Score = 277 (102.6 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 77/248 (31%), Positives = 118/248 (47%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 4003
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4004 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4061
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 4062 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4112
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSN 315
Y +G ++ + +P L+ L ++ CG T LT +++WG
Sbjct: 4113 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDG 4172
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 4173 DYGKLGRG 4180
Score = 277 (102.6 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 85/291 (29%), Positives = 139/291 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2963 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 3020
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 3021 NGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3080
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3081 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3135
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3136 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3189
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I +L ++ CG + LT G ++TWG + LG G
Sbjct: 3190 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3240
Score = 275 (101.9 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 86/278 (30%), Positives = 128/278 (46%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-------SD----TLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 240 (89.5 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 65/190 (34%), Positives = 97/190 (51%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3125 LGEYGRLGHG 3134
Score = 137 (53.3 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4177 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4234
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4235 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4293
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4294 LVAALQGKKVNRVACGSAHTLA 4315
Score = 37 (18.1 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL 76
N D + + S + +W+P++ + H K L
Sbjct: 1591 NVDKRPIAIKSPKDKWQPLLSTVTGVHKYKWL 1622
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 320 (117.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 94/311 (30%), Positives = 158/311 (50%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 3038 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3092
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3093 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3151
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3152 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3209
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3210 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3260
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVV 294
A G LH + ++G+VY +GD D Q+GN R+P+L+ L + V
Sbjct: 3261 VHVAVGALHCLAVTDSGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLEGQKITRVA 3316
Query: 295 CGGYHTCVLTS 305
CG H+ T+
Sbjct: 3317 CGSSHSVAWTT 3327
Score = 314 (115.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 82/263 (31%), Positives = 128/263 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ G + + T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4241 --------RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 310 (114.2 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 93/287 (32%), Positives = 130/287 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G ES P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ EVV ++ G HS+ +T G+LY WGK G+LG
Sbjct: 4072 KLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 4130
Query: 161 AAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P VE L G + G Q++ +T V SWG G G+LG G
Sbjct: 4131 EDQLKP--KLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG------ 4182
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G S P I L G+ V G S + ++G VY +G ++ +H
Sbjct: 4183 G---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4239
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP + L + + G H T GE+YTWG N+ G LG G
Sbjct: 4240 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 304 (112.1 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 94/292 (32%), Positives = 137/292 (46%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 461 EKRFLILSRNGRVYTQAYNS--DMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 518
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 519 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 578 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 636 GKLGRG------G---SDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
++ H R P L+ L + +V G H LT E+++WGSN+
Sbjct: 687 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 299 (110.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 92/292 (31%), Positives = 144/292 (49%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 4015
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4016 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4073
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4074 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4129
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 4130 -------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4183 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 297 (109.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 94/289 (32%), Positives = 134/289 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG + S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLG-MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3135
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG---- 3189
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3190 --G---SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3293
Score = 279 (103.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 76/238 (31%), Positives = 118/238 (49%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Score = 277 (102.6 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 77/248 (31%), Positives = 118/248 (47%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 4005
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4006 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4063
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 4064 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4114
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSN 315
Y +G ++ + +P L+ L ++ CG T LT +++WG
Sbjct: 4115 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4174
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 4175 DYGKLGRG 4182
Score = 277 (102.6 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 82/266 (30%), Positives = 131/266 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRA--VDKM 270
+ Y P+L++ L+G KV AAG H + E+ V+ +G D+ D +
Sbjct: 696 EHV--------RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCG 296
+ P L SK + + CG
Sbjct: 747 RVTKPEPTALPGLDSK--HIVGIACG 770
Score = 275 (101.9 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 84/291 (28%), Positives = 139/291 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VY+ G
Sbjct: 2964 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYSCGEAT 3021
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 3022 NGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3081
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3082 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3136
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3137 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3190
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I +L ++ CG + LT G ++TWG + LG G
Sbjct: 3191 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3241
Score = 272 (100.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 86/278 (30%), Positives = 127/278 (45%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-------SD----MLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 242 (90.2 bits), Expect = 8.5e-19, Sum P(2) = 8.5e-19
Identities = 65/190 (34%), Positives = 96/190 (50%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3126 LGEYGRLGHG 3135
Score = 137 (53.3 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4179 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4236
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4237 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4295
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4296 LVAALQGKKVNRVACGSAHTLA 4317
Score = 38 (18.4 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
+G+GSL ++ +VC+ A + + E CV
Sbjct: 1084 MGVGSLLKKYTALVCTHIGDILPVAASIASSSWQHFAEVACV 1125
Score = 37 (18.1 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
G + R L P SE + GG + GG
Sbjct: 2181 GKTSERAQLEDYFPDSENLEVGGLMAVLAVIGG 2213
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 312 (114.9 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 94/299 (31%), Positives = 136/299 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + P + + S+ +ACG HT +T TG +Y G ++
Sbjct: 296 WGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNA 355
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + ++ +S G H++ IT G+L+ +G + G LG G
Sbjct: 356 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 414
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
K + + P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 415 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKS 472
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+VY G V
Sbjct: 473 RLGHGDKEPRL---------KPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGS-TV 522
Query: 268 DKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + P L+ KL EE+ CG YH VLTS E++TWG NG LG G
Sbjct: 523 YGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHG 581
Score = 221 (82.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 80/291 (27%), Positives = 132/291 (45%)
Query: 53 LGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI 109
+G L SR ++ E + + +ACG H ++ G V+ G G+LG +
Sbjct: 251 IGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLG--HGM 308
Query: 110 GYSLE-PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVI 165
G + P I L + ++ G H+ A+T+ GE+Y WG ++ G LG G + I
Sbjct: 309 GKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWI 368
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P L G+ + G + +T G++ ++G G G LGHG + ++
Sbjct: 369 PKRISGP-LEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETV-------- 419
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDE-----------NGRVYIFGDRAVDKMLFQE 274
+ PR ++ L G++ A G H+A I E +G+++ +GD DK
Sbjct: 420 -FYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDG--DKSRLGH 476
Query: 275 GNHARR--PSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
G+ R P+ +S L ++ V CG T LT+ G++YT GS G LG
Sbjct: 477 GDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLG 527
Score = 219 (82.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 55/151 (36%), Positives = 78/151 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E R +P SA H+ +ACG + T+ LT +G VY G +GQ
Sbjct: 466 WGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQ 525
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + N L L L K+ V+ I+ G +H + +T E++ WGK +NG+LG G
Sbjct: 526 LG-NPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVE 584
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT V+ L K A G + A+
Sbjct: 585 DR--KAPTLVDALKERHVKNIACGSNFTAAI 613
Score = 208 (78.3 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 72/260 (27%), Positives = 115/260 (44%)
Query: 90 GCVYATG---LNDFGQLGISENIGYS------LEPLRI-SGLKKEVVQISTGYHHSSAIT 139
G VY G + + G +NIGY L P + S + +V I+ G H++ ++
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVS 288
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
GE++ WG+ S G+LG G K + P +E L+ A G + AVT G++
Sbjct: 289 RQGEVFTWGEASGGRLGHGM--GKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIY 346
Query: 200 SWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDEN 256
+WG G +G LGHG + S + P+ I LEG+++ + G H+A I
Sbjct: 347 TWGDGTHNAGLLGHGTD---------VSHWIPKRISGPLEGLQIASVSCGPWHTALITST 397
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLT---------- 304
G+++ FGD + + P + L + V CG +H +
Sbjct: 398 GQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSS 457
Query: 305 -SGGELYTWGSNENGCLGIG 323
S G+L+TWG + LG G
Sbjct: 458 VSSGKLFTWGDGDKSRLGHG 477
Score = 202 (76.2 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 60/213 (28%), Positives = 95/213 (44%)
Query: 129 STGYHHSSAITVD--GELYMWGK---------NSNGQLG-LGKKAAKVIPIPTKVECLSG 176
S+ H S+ D G++Y+WG+ ++ +G LG ++ +IP P + +
Sbjct: 214 SSSSHGSAPDDCDALGDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLD 273
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ A G + + V+ G+V +WG GRLGHG + G P+LI+ L
Sbjct: 274 VH--HIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLA 322
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS---- 290
+ A G H+ + G +Y +GD + L G P IS P
Sbjct: 323 ATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQI 381
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V CG +HT ++TS G+L+T+G G LG G
Sbjct: 382 ASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 414
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 311 (114.5 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 91/289 (31%), Positives = 148/289 (51%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ + S L IS ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL +
Sbjct: 118 QLGLGDTEERSTFHL-ISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGL-E 175
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
V +P +V I + G+ S VT G++ ++G G+LG + +L
Sbjct: 176 NVTNVC-VPQQVTVGKPI--SWISCGYYHSAFVTTEGQLYTFGEPECGKLG--LPNQLL- 229
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P+ + + G V++A G H+ + E VY FG ++ G
Sbjct: 230 ----VNHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGL--GTFLF 281
Query: 280 RPSLISKLPYSEE-----VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S+ + + ++ + CG HT ++T G +YT+G +G LG+G
Sbjct: 282 ETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLG 330
Score = 276 (102.2 bits), Expect = 7.9e-23, P = 7.9e-23
Identities = 93/290 (32%), Positives = 143/290 (49%)
Query: 23 KLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACG 79
K C R + ST + A GN + G+LGLG E R + S F + +K L+ G
Sbjct: 90 KFAACGRNHTLVSTEGGKVYAAGGNNE-GQLGLGDTEERSTFHLISFFTSQRKIKQLSAG 148
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
+ LTE G ++ G N GQ+G+ EN+ P +++ + K + IS GY+HS+ +T
Sbjct: 149 SNTSAALTEDGELFMWGDNSEGQIGL-ENVTNVCVPQQVT-VGKPISWISCGYYHSAFVT 206
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+G+LY +G+ G+LGL + +P V + G Q A G +V +T V
Sbjct: 207 TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKVV-QVACGGGHTVVLTEKA-VY 264
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LG G FL TS P+ I+ ++ K+ A G H+A I + G +
Sbjct: 265 TFGLGQFGQLGLGT------FLFETS--VPKAIEHIKDQKISFIACGENHTALITDMGLM 316
Query: 260 YIFGDRAVDKMLFQEGNHARR--PSLISK-LPYSEEVV-CGGYHTCVLTS 305
Y FGD K+ N + P+L S L + ++V CGG HT V +
Sbjct: 317 YTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFAT 366
Score = 257 (95.5 bits), Expect = 8.4e-21, P = 8.4e-21
Identities = 78/258 (30%), Positives = 122/258 (47%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + + +S FT KQ + G S
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEER-----STFHLIS-FFTSQRKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G +++ P+ + G + + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQIGLENVTNVC---------VPQQVTV--GKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
SA + G++Y FG+ K+ NH R P + +P +V CGG HT VLT
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Query: 306 GGELYTWGSNENGCLGIG 323
+YT+G + G LG+G
Sbjct: 261 KA-VYTFGLGQFGQLGLG 277
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 319 (117.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 93/311 (29%), Positives = 158/311 (50%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +P
Sbjct: 3041 RQITALSNYVVK---KVAVHSG-GRHAMALTVDGKIFS-WGEGDDGKLGHFSRMNCDKPR 3095
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 3096 LIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3154
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3155 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3212
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3213 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV----RK-----PQVVEGLRGKKI 3263
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVV 294
A G LH + + G+VY +GD D Q+GN R+P+L+ L + V
Sbjct: 3264 VHVAVGALHCLAVTDTGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLEGQKITRVA 3319
Query: 295 CGGYHTCVLTS 305
CG H+ T+
Sbjct: 3320 CGSSHSVAWTT 3330
Score = 306 (112.8 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 92/292 (31%), Positives = 145/292 (49%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4076
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4077 GHGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD-- 4132
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 4133 -------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4186 GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Score = 306 (112.8 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 92/290 (31%), Positives = 142/290 (48%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLFLTETGCVYA 94
++RF L NG S ++ +V S ++ +K A G H L L+ G V++
Sbjct: 461 EKRFLILSRNGRVYTQAYNS-DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFS 519
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWGK 149
G D G+LG + + EP IS L K VV I+ G +S+AIT +GELY WG+
Sbjct: 520 WGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGR 578
Query: 150 NSNGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+ G+LG G + IP + T ++ L + G Q++AVT G+V SWG G G+
Sbjct: 579 GNYGRLGHGSSEDQTIPMLVTGLKGLK-VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG G G S TP+LI++L+ + + G S + ++G+VY +G
Sbjct: 638 LGRG------G---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQ 688
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
++ H R P L+ L + +V G H LT E+++WGSN+
Sbjct: 689 RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 301 (111.0 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 95/289 (32%), Positives = 134/289 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G ES P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ EVV I+ G HS+ IT G+L+ WGK G+LG G
Sbjct: 4075 KLGHG-NRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDS 4133
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P VE L G A G Q++ +T V SWG G G+LG G
Sbjct: 4134 EDQLKP--KLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4191
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
++ S + +L VKV+ G S + ++G VY +G ++ +H
Sbjct: 4192 VPMKIDS------LTDLGVVKVE---CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4242
Query: 279 RRPSLISKLPYSE--EVVCGGYH-TCVLTSG-GELYTWGSNENGCLGIG 323
RRP + L + + G H C G GE+YTWG N+ G LG G
Sbjct: 4243 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDG 4291
Score = 299 (110.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 98/308 (31%), Positives = 143/308 (46%)
Query: 25 GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GG 80
G K + T++ + A G GRLGLG + S P+ +A + +K +A GG
Sbjct: 3003 GGSKSLFAVTVEGKVYAC-GEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGG 3060
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT 139
H + LT G +++ G D G+LG + +P I LK K + I+ G HS+AIT
Sbjct: 3061 RHAMALTVDGKIFSWGEGDDGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAIT 3119
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGK 197
GELY WG G+LG G ++ P KV L G Q A G Q++A+T G
Sbjct: 3120 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G G S P+ I+ L G V G S + ++G
Sbjct: 3178 VFSWGDGDFGKLGRG------G---SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
V+ +G ++ H R+P ++ L + V G H +T G++Y WG N
Sbjct: 3229 VVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3288
Query: 316 ENGCLGIG 323
++G G G
Sbjct: 3289 DHGQQGNG 3296
Score = 289 (106.8 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 79/265 (29%), Positives = 126/265 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ G + + T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+ + + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR- 4243
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG--RVYIFGDRAVDKMLFQEGNH 277
PR ++ L+G KV A G LH C E+G VY +GD ++ N
Sbjct: 4244 --------RPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNA 4295
Query: 278 ARRPSLISKLPYSE--EVVCGGYHT 300
+RP L++ L + V CG HT
Sbjct: 4296 IQRPRLVAALQGKKINRVACGSAHT 4320
Score = 279 (103.3 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 76/238 (31%), Positives = 119/238 (50%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3083
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Score = 278 (102.9 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 85/291 (29%), Positives = 138/291 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2967 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 3024
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H+ A+TVDG+++ WG+ +G+LG
Sbjct: 3025 NGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLG 3084
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3085 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD--- 3139
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3140 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3193
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I +L ++ CG + LT G ++TWG + LG G
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3244
Score = 274 (101.5 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 85/276 (30%), Positives = 126/276 (45%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISG 120
P+ C + +AC L L+ G VY N S+ +G L + L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLGPQLVQSLASRN 495
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSGIF 178
+ K + S G HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 496 IVK-IAAHSDG-HHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKLISALSG-- 547
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S A+T G++ +WG G GRLGHG S + P L
Sbjct: 548 -KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIPML 597
Query: 232 IKELEGVKV--KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+ L+G+KV +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++YTWG +N LG G
Sbjct: 658 LDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG 693
Score = 272 (100.8 bits), Expect = 7.9e-22, Sum P(2) = 7.9e-22
Identities = 78/248 (31%), Positives = 119/248 (47%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4009 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSACI G +
Sbjct: 4067 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDIAAGGAHSACITAAGDL 4117
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLP-YSE-EVVCGG--YHTCVLTSGGELYTWGSN 315
+ +G ++ + +P L+ L Y ++ CG T LT +++WG
Sbjct: 4118 FTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4177
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 4178 DYGKLGRG 4185
Score = 270 (100.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 80/266 (30%), Positives = 131/266 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRA--VDKM 270
+ Y P+L++ L+G KV AAG H + E+ V+ +G D+ D +
Sbjct: 696 EHV--------RY-PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCG 296
+ A P L +K + + CG
Sbjct: 747 RITKPEPAALPGLDTK--HIVGIACG 770
Score = 235 (87.8 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 63/190 (33%), Positives = 97/190 (51%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVK-----KVAVHSGG-RHAMALTV 3068
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+++ +G+ K+ + +P LI L ++ CG H+ +TS GELYTWG
Sbjct: 3069 DGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3129 LGEYGRLGHG 3138
Score = 125 (49.1 bits), Expect = 0.00090, P = 0.00090
Identities = 46/142 (32%), Positives = 63/142 (44%)
Query: 2 LGRSLTAMTKYYLKQD--IKLGSKLGICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLES 58
LGR + K +K D LG C S L + A WG GDY RLG GS +
Sbjct: 4182 LGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4241
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGC--VYATGLNDFGQLGISENIGYSLEPL 116
RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4242 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4300
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K++ +++ G H+ A
Sbjct: 4301 LVAALQGKKINRVACGSAHTLA 4322
Score = 37 (18.1 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 50 RLGLGSLESRWRPVVCS 66
+LG+GSL ++ ++C+
Sbjct: 1083 QLGVGSLLKKYTALLCT 1099
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 319 (117.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 93/311 (29%), Positives = 158/311 (50%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +P
Sbjct: 3041 RQITALSNYVVK---KVAVHSG-GRHAMALTVDGKIFS-WGEGDDGKLGHFSRMNCDKPR 3095
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 3096 LIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3154
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3155 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3212
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3213 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV----RK-----PQVVEGLRGKKI 3263
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVV 294
A G LH + + G+VY +GD D Q+GN R+P+L+ L + V
Sbjct: 3264 VHVAVGALHCLAVTDTGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLEGQKITRVA 3319
Query: 295 CGGYHTCVLTS 305
CG H+ T+
Sbjct: 3320 CGSSHSVAWTT 3330
Score = 306 (112.8 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 92/292 (31%), Positives = 145/292 (49%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4019 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4076
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4077 GHGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD-- 4132
Query: 216 SILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V IA +G + C+ ++ V+ +GD K+
Sbjct: 4133 -------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4186 GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Score = 306 (112.8 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 92/290 (31%), Positives = 142/290 (48%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLFLTETGCVYA 94
++RF L NG S ++ +V S ++ +K A G H L L+ G V++
Sbjct: 461 EKRFLILSRNGRVYTQAYNS-DTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFS 519
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWGK 149
G D G+LG + + EP IS L K VV I+ G +S+AIT +GELY WG+
Sbjct: 520 WGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGR 578
Query: 150 NSNGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+ G+LG G + IP + T ++ L + G Q++AVT G+V SWG G G+
Sbjct: 579 GNYGRLGHGSSEDQTIPMLVTGLKGLK-VIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG G G S TP+LI++L+ + + G S + ++G+VY +G
Sbjct: 638 LGRG------G---SDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQ 688
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
++ H R P L+ L + +V G H LT E+++WGSN+
Sbjct: 689 RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 301 (111.0 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 95/289 (32%), Positives = 134/289 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G ES P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ EVV I+ G HS+ IT G+L+ WGK G+LG G
Sbjct: 4075 KLGHG-NRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDS 4133
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P VE L G A G Q++ +T V SWG G G+LG G
Sbjct: 4134 EDQLKP--KLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCK 4191
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
++ S + +L VKV+ G S + ++G VY +G ++ +H
Sbjct: 4192 VPMKIDS------LTDLGVVKVE---CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4242
Query: 279 RRPSLISKLPYSE--EVVCGGYH-TCVLTSG-GELYTWGSNENGCLGIG 323
RRP + L + + G H C G GE+YTWG N+ G LG G
Sbjct: 4243 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDG 4291
Score = 299 (110.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 98/308 (31%), Positives = 143/308 (46%)
Query: 25 GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GG 80
G K + T++ + A G GRLGLG + S P+ +A + +K +A GG
Sbjct: 3003 GGSKSLFAVTVEGKVYAC-GEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGG 3060
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT 139
H + LT G +++ G D G+LG + +P I LK K + I+ G HS+AIT
Sbjct: 3061 RHAMALTVDGKIFSWGEGDDGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAIT 3119
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGK 197
GELY WG G+LG G ++ P KV L G Q A G Q++A+T G
Sbjct: 3120 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGL 3177
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G G S P+ I+ L G V G S + ++G
Sbjct: 3178 VFSWGDGDFGKLGRG------G---SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
V+ +G ++ H R+P ++ L + V G H +T G++Y WG N
Sbjct: 3229 VVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDN 3288
Query: 316 ENGCLGIG 323
++G G G
Sbjct: 3289 DHGQQGNG 3296
Score = 289 (106.8 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 79/265 (29%), Positives = 126/265 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ G + + T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+ + + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR- 4243
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG--RVYIFGDRAVDKMLFQEGNH 277
PR ++ L+G KV A G LH C E+G VY +GD ++ N
Sbjct: 4244 --------RPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNA 4295
Query: 278 ARRPSLISKLPYSE--EVVCGGYHT 300
+RP L++ L + V CG HT
Sbjct: 4296 IQRPRLVAALQGKKINRVACGSAHT 4320
Score = 279 (103.3 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 76/238 (31%), Positives = 119/238 (50%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3083
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Score = 278 (102.9 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 85/291 (29%), Positives = 138/291 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2967 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 3024
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H+ A+TVDG+++ WG+ +G+LG
Sbjct: 3025 NGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLG 3084
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3085 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD--- 3139
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3140 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3193
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I +L ++ CG + LT G ++TWG + LG G
Sbjct: 3194 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3244
Score = 274 (101.5 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 85/276 (30%), Positives = 126/276 (45%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISG 120
P+ C + +AC L L+ G VY N S+ +G L + L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLGPQLVQSLASRN 495
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSGIF 178
+ K + S G HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 496 IVK-IAAHSDG-HHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKLISALSG-- 547
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S A+T G++ +WG G GRLGHG S + P L
Sbjct: 548 -KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIPML 597
Query: 232 IKELEGVKV--KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+ L+G+KV +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++YTWG +N LG G
Sbjct: 658 LDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG 693
Score = 272 (100.8 bits), Expect = 7.9e-22, Sum P(2) = 7.9e-22
Identities = 78/248 (31%), Positives = 119/248 (47%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 4008
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4009 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4066
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSACI G +
Sbjct: 4067 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDIAAGGAHSACITAAGDL 4117
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLP-YSE-EVVCGG--YHTCVLTSGGELYTWGSN 315
+ +G ++ + +P L+ L Y ++ CG T LT +++WG
Sbjct: 4118 FTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDG 4177
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 4178 DYGKLGRG 4185
Score = 270 (100.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 80/266 (30%), Positives = 131/266 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRA--VDKM 270
+ Y P+L++ L+G KV AAG H + E+ V+ +G D+ D +
Sbjct: 696 EHV--------RY-PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCG 296
+ A P L +K + + CG
Sbjct: 747 RITKPEPAALPGLDTK--HIVGIACG 770
Score = 235 (87.8 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 63/190 (33%), Positives = 97/190 (51%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVK-----KVAVHSGG-RHAMALTV 3068
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+++ +G+ K+ + +P LI L ++ CG H+ +TS GELYTWG
Sbjct: 3069 DGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWG 3128
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3129 LGEYGRLGHG 3138
Score = 125 (49.1 bits), Expect = 0.00090, P = 0.00090
Identities = 46/142 (32%), Positives = 63/142 (44%)
Query: 2 LGRSLTAMTKYYLKQD--IKLGSKLGICKRWISSTLQRRFAAL-WGNGDYGRLGLGSLES 58
LGR + K +K D LG C S L + A WG GDY RLG GS +
Sbjct: 4182 LGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 4241
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGC--VYATGLNDFGQLGISENIGYSLEPL 116
RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4242 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4300
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K++ +++ G H+ A
Sbjct: 4301 LVAALQGKKINRVACGSAHTLA 4322
Score = 37 (18.1 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 50 RLGLGSLESRWRPVVCS 66
+LG+GSL ++ ++C+
Sbjct: 1083 QLGVGSLLKKYTALLCT 1099
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 318 (117.0 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 95/287 (33%), Positives = 131/287 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G ES P + + + ++ +A GG H L L+ G +Y+ G + G
Sbjct: 4008 GYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDG 4067
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ EVV I+ G HS+ IT GELY WGK G+LG G
Sbjct: 4068 KLGHG-NRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDS 4126
Query: 161 AAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P VE L G + G Q++ +T V SWG G G+LG G
Sbjct: 4127 EDQLKP--KLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG------ 4178
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G S P I L G+ V G S + ++G VY +G ++ +H
Sbjct: 4179 G---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4235
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP + L + + G H T GE+YTWG N+ G LG G
Sbjct: 4236 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4282
Score = 315 (115.9 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 93/311 (29%), Positives = 158/311 (50%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R ++A++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +P
Sbjct: 3033 RQISALSNYVVK---KVAVHSG-GRHAMALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3087
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ +T +G +Y+ GL ++G+LG +N L P + L
Sbjct: 3088 LIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTT-QLRPKLVKVLLG 3146
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
VVQ++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3147 HRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3204
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3205 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV----RK-----PQMVEGLRGKKI 3255
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVV 294
A G LH + E G+V+ +GD D Q+GN R+P+L+ L + V
Sbjct: 3256 VHVAVGALHCLAVTETGQVFAWGDN--DHG--QQGNGTTTVNRKPTLVQGLEGQKITRVA 3311
Query: 295 CGGYHTCVLTS 305
CG H+ T+
Sbjct: 3312 CGSSHSVAWTT 3322
Score = 310 (114.2 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 80/263 (30%), Positives = 128/263 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G +Y G +G+
Sbjct: 4061 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGR 4120
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ G + + T D ++ WG G+LG G
Sbjct: 4121 LGHGDSED-QLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4178
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4179 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR- 4236
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4237 --------RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4288
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4289 RPRLVAALQGKKINRVACGSAHT 4311
Score = 309 (113.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 87/266 (32%), Positives = 132/266 (49%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P++ A + LA G H L L+ G V++ G D G+LG + Y EP IS
Sbjct: 474 PMLVHALTSRKIMKLAAHPDGQHYLALSVNGEVFSWGCGDGGRLGHGDTT-YLEEPTMIS 532
Query: 120 ---G--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
G + K+VV I+ G +S+AIT DGEL+ WG+ + G+LG G + P+ V L
Sbjct: 533 VFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPM--LVTAL 590
Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G+ A G Q++AVT G+V SWG G G+LG G G S TP+L+
Sbjct: 591 KGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG------G---SDGCKTPKLV 641
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
++L+ + + G S + ++G+VY +G ++ H R P L+ L
Sbjct: 642 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRV 701
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNE 316
++ G H LT GE+++WGSN+
Sbjct: 702 VDIAVGSTHCLALTEEGEVHSWGSND 727
Score = 302 (111.4 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 96/289 (33%), Positives = 135/289 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ SA + +K +A GG H + LT G V++ G D
Sbjct: 3013 GEATNGRLGLG-LSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3071
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3072 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3130
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3131 DNTTQLRPKLVKV--LLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG---- 3184
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3185 --G---SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3239
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G+++ WG N++G G G
Sbjct: 3240 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNG 3288
Score = 294 (108.6 bits), Expect = 6.9e-24, P = 6.9e-24
Identities = 88/291 (30%), Positives = 142/291 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG +E V +L+ + GG TLF +T G +YATG
Sbjct: 3955 WGHNHRGQLG--GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4012
Query: 101 GQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI +E++ LE ++ ++K V +++G H A++ +GELY WG+ +G+LG
Sbjct: 4013 GRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGELYSWGEAEDGKLG 4070
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G+ A G S +T G++ +WG G GRLGHG
Sbjct: 4071 HGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGD--- 4125
Query: 217 ILGFLRSTSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V +A +G + C+ ++ V+ +GD K+
Sbjct: 4126 ------SEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4179
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4180 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4230
Score = 288 (106.4 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 88/291 (30%), Positives = 138/291 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2959 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTAEGKVYACGEAT 3016
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +IS L VV+ + +G H+ A+TVDG+++ WG+ +G+LG
Sbjct: 3017 NGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLG 3076
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ SWG G GRLGHG
Sbjct: 3077 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGD--- 3131
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
+T++ P+L+K L G +V A G + + + G V+ +GD K+
Sbjct: 3132 ------NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGG 3185
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I +L ++ CG + LT G ++TWG + LG G
Sbjct: 3186 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3236
Score = 284 (105.0 bits), Expect = 7.9e-23, P = 7.9e-23
Identities = 78/238 (32%), Positives = 118/238 (49%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+T +G++Y G+ +
Sbjct: 2957 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEAT 3016
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3017 NGRLGLGLSSG-TIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3075
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3076 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3126
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L +V CG T LT G +++WG + G LG G
Sbjct: 3127 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG 3184
Score = 284 (105.0 bits), Expect = 7.9e-23, P = 7.9e-23
Identities = 85/284 (29%), Positives = 132/284 (46%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G LG + P+ C A + + C L LT TG VY ++ ++
Sbjct: 418 WGLLGWKPYANVNGPIQCKALSNLGVTQIVCSEKGFLILTITGAVYT---QNYKSTTLAP 474
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ ++L +I L G H+ A++V+GE++ WG G+LG G +
Sbjct: 475 MLVHALTSRKIMKLAAH----PDGQHYL-ALSVNGEVFSWGCGDGGRLGHGDTT--YLEE 527
Query: 168 PTKVECLSGI-FTKQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
PT + SG KQ A G S A+T G++ +WG G GRLGHG S
Sbjct: 528 PTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGS---------S 578
Query: 224 TSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P
Sbjct: 579 EDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 638
Query: 282 SLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L+ KL + +V CG + LT G++YTWG +N LG G
Sbjct: 639 KLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 682
Score = 275 (101.9 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 78/248 (31%), Positives = 119/248 (47%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3943 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPTEALATLRPVQLIGGEQTLFAVTAD 4001
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F ++ A+ G + +A++ G++
Sbjct: 4002 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELY 4059
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L GV+V AAG HSACI +G +
Sbjct: 4060 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGVEVVDIAAGGAHSACITASGEL 4110
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSN 315
Y +G ++ + +P L+ L +V CG T LT +++WG
Sbjct: 4111 YTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDG 4170
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 4171 DYGKLGRG 4178
Score = 256 (95.2 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 81/288 (28%), Positives = 135/288 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA----LACGGAHTLFLTETGCVYATGLN 98
WG GD GRLG G P + S F + +ACG ++ +T G ++ G
Sbjct: 509 WGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRG 568
Query: 99 DFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
++G+LG SE+ + + GLK V +G + A+T +G+++ WG G+LG
Sbjct: 569 NYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG 628
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + P VE L + + G + SVA+T G+V +WG G + RLGHG +
Sbjct: 629 RG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEH 686
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG- 275
+ Y P+L+ L+G +V A G H + E G V+ +G DK+ +
Sbjct: 687 V--------RY-PKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSN--DKLQHFDTL 735
Query: 276 -NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ ++P + L S+ +V G +C G+ ++W S +G+
Sbjct: 736 FSNKKQPKALPGLN-SKHIV--GI-SC---GPGQSFSWSSCSEWSVGL 776
Score = 240 (89.5 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 64/190 (33%), Positives = 97/190 (51%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2949 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 3006
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R S + ++K KV + + G H+ +
Sbjct: 3007 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVK-----KVAVHSGG-RHAMALTV 3060
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+WG
Sbjct: 3061 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3120
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3121 LGEYGRLGHG 3130
Score = 136 (52.9 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 47/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4175 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4232
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4233 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4291
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K++ +++ G H+ A
Sbjct: 4292 LVAALQGKKINRVACGSAHTLA 4313
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 317 (116.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 94/311 (30%), Positives = 157/311 (50%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 2958 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3012
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3013 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3071
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3072 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3129
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3130 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3180
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVV 294
A G LH + + G+VY +GD D Q+GN R+P+L+ L + V
Sbjct: 3181 VHVAVGALHCLAVTDAGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLEGQKITRVA 3236
Query: 295 CGGYHTCVLTS 305
CG H+ T+
Sbjct: 3237 CGSSHSVAWTT 3247
Score = 316 (116.3 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 82/263 (31%), Positives = 128/263 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3986 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4045
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ G + + T D ++ WG G+LG G
Sbjct: 4046 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4103
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4104 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR- 4161
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4162 --------RPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ 4213
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4214 RPRLVAALQGKKVNRVACGSAHT 4236
Score = 306 (112.8 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 93/287 (32%), Positives = 130/287 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G ES P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 3933 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3992
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ EVV ++ G HS+ +T G+LY WGK G+LG
Sbjct: 3993 KLGHG-NRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 4051
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P VE L G A G Q++ +T V SWG G G+LG G
Sbjct: 4052 EDQLKP--KLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG------ 4103
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G S P I L G+ V G S + ++G VY +G ++ +H
Sbjct: 4104 G---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4160
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP + L + + G H + GE+YTWG N+ G LG G
Sbjct: 4161 RRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4207
Score = 306 (112.8 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 94/292 (32%), Positives = 137/292 (46%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 371 EKRFLILSRNGRVYTQAYNS--DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 428
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 429 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 487
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 488 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 545
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 546 GKLGRG------G---SDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGD 596
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
++ H R P L+ L + +V G H LT E+++WGSN+
Sbjct: 597 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 648
Score = 298 (110.0 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 98/308 (31%), Positives = 142/308 (46%)
Query: 25 GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GG 80
G K + T++ + A G GRLGLG + S P+ +A + +K +A GG
Sbjct: 2920 GGSKSLFAVTVEGKVYAC-GEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGG 2977
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT 139
H LT G V++ G D G+LG + +P I LK K + I+ G HS+A+T
Sbjct: 2978 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALT 3036
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGK 197
GELY WG G+LG G ++ P KV L G Q A G Q++A+T G
Sbjct: 3037 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGL 3094
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G G S P+ I+ L G V G S + ++G
Sbjct: 3095 VFSWGDGDFGKLGRG------G---SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3145
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
V+ +G ++ H R+P ++ L + V G H +T G++Y WG N
Sbjct: 3146 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3205
Query: 316 ENGCLGIG 323
++G G G
Sbjct: 3206 DHGQQGNG 3213
Score = 292 (107.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 89/292 (30%), Positives = 141/292 (48%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3880 WGHNHRGQLG-GIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGA 3936
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 3937 GGRLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 3994
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 3995 GHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4050
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V A G + C+ ++ V+ +GD K+
Sbjct: 4051 -------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4103
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4104 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4155
Score = 277 (102.6 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 76/238 (31%), Positives = 118/238 (49%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2882 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2941
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 2942 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3000
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3001 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3051
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3052 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3109
Score = 277 (102.6 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 85/291 (29%), Positives = 139/291 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2884 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 2941
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 2942 NGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3001
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3002 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3056
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3057 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3110
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I +L ++ CG + LT G ++TWG + LG G
Sbjct: 3111 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3161
Score = 275 (101.9 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 86/278 (30%), Positives = 128/278 (46%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +L P + GL
Sbjct: 353 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-------SD----TLAPQLVQGL 401
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 402 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 457
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 458 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 505
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 565
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 566 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 603
Score = 274 (101.5 bits), Expect = 8.9e-22, P = 8.9e-22
Identities = 78/248 (31%), Positives = 117/248 (47%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3868 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAVTAD 3926
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 3927 GKLYATGYGAGGRLGVG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 3984
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G +V AAG HSAC+ G +
Sbjct: 3985 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGTEVVDVAAGGAHSACVTAAGDL 4035
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSN 315
Y +G ++ + +P L+ L +V CG T LT +++WG
Sbjct: 4036 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDG 4095
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 4096 DYGKLGRG 4103
Score = 240 (89.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 65/190 (34%), Positives = 97/190 (51%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2874 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2931
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2932 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 2985
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 2986 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3045
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3046 LGEYGRLGHG 3055
Score = 171 (65.3 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 50/155 (32%), Positives = 76/155 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 540 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 599
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 600 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 656
Query: 160 KAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVA 191
+ K P P+ L G+ TK A G QS A
Sbjct: 657 RVTK--PEPS---ALPGLDTKHIVGIACGPAQSFA 686
Score = 133 (51.9 bits), Expect = 0.00012, P = 0.00012
Identities = 47/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4100 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4157
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + +E G VY G ND GQLG P
Sbjct: 4158 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4216
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4217 LVAALQGKKVNRVACGSAHTLA 4238
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 317 (116.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 94/311 (30%), Positives = 157/311 (50%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 3038 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3092
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3093 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3151
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3152 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3209
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3210 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3260
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVV 294
A G LH + + G+VY +GD D Q+GN R+P+L+ L + V
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLEGQKITRVA 3316
Query: 295 CGGYHTCVLTS 305
CG H+ T+
Sbjct: 3317 CGSSHSVAWTT 3327
Score = 314 (115.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 82/263 (31%), Positives = 128/263 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ G + + T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR- 4241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4242 --------RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHT 4316
Score = 310 (114.2 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 94/287 (32%), Positives = 130/287 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G ES P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ EVV ++ G HS+ +T G+LY WGK G+LG
Sbjct: 4073 KLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 4131
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P VE L G A G Q++ +T V SWG G G+LG G
Sbjct: 4132 EDQLKP--KLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG------ 4183
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G S P I L G+ V G S + ++G VY +G ++ +H
Sbjct: 4184 G---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4240
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP + L + + G H T GE+YTWG N+ G LG G
Sbjct: 4241 RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4287
Score = 305 (112.4 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 94/292 (32%), Positives = 137/292 (46%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 461 EKRFLILSRNGRVYTQAYNS--DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 518
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 519 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 578 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 636 GKLGRG------G---SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGD 686
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
++ H R P L+ L + +V G H LT E+++WGSN+
Sbjct: 687 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 300 (110.7 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 99/308 (32%), Positives = 142/308 (46%)
Query: 25 GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GG 80
G K + T++ + A G GRLGLG L S P+ +A + +K +A GG
Sbjct: 3000 GGSKSLFAVTVEGKVYAC-GEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGG 3057
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT 139
H LT G V++ G D G+LG + +P I LK K + I+ G HS+A+T
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGK 197
GELY WG G+LG G ++ P KV L G Q A G Q++A+T G
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G G S P+ I+ L G V G S + ++G
Sbjct: 3175 VFSWGDGDFGKLGRG------G---SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
V+ +G ++ H R+P ++ L + V G H +T G++Y WG N
Sbjct: 3226 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3285
Query: 316 ENGCLGIG 323
++G G G
Sbjct: 3286 DHGQQGNG 3293
Score = 298 (110.0 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 91/292 (31%), Positives = 142/292 (48%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLG-GIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGA 4016
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LGI +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4017 GGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4074
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 GHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4130
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V A G + C+ ++ V+ +GD K+
Sbjct: 4131 -------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4183
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4184 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4235
Score = 279 (103.3 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 82/266 (30%), Positives = 132/266 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRA--VDKM 270
+ Y P+L++ L+G KV AAG H + E+ V+ +G D+ D +
Sbjct: 696 EHV--------RY-PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCG 296
+ A P L +K + + CG
Sbjct: 747 RVTKPEPAALPGLDTK--HIVGIACG 770
Score = 278 (102.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 76/238 (31%), Positives = 118/238 (49%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3022 NGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189
Score = 278 (102.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 78/248 (31%), Positives = 118/248 (47%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTAD 4006
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4007 GKLYATGYGAGGRLGIG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4064
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G++V AAG HSAC+ G +
Sbjct: 4065 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 4115
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSN 315
Y +G ++ + +P L+ L +V CG T LT +++WG
Sbjct: 4116 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDG 4175
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 4176 DYGKLGRG 4183
Score = 277 (102.6 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 85/291 (29%), Positives = 139/291 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2964 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 3021
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 3022 NGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3081
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3082 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3136
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3137 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3190
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I +L ++ CG + LT G ++TWG + LG G
Sbjct: 3191 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3241
Score = 275 (101.9 bits), Expect = 7.1e-22, P = 7.1e-22
Identities = 86/278 (30%), Positives = 128/278 (46%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-------SD----TLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 241 (89.9 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 65/190 (34%), Positives = 97/190 (51%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3126 LGEYGRLGHG 3135
Score = 137 (53.3 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 48/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4180 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4237
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 4238 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4296
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4297 LVAALQGKKVNRVACGSAHTLA 4318
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 317 (116.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 94/311 (30%), Positives = 157/311 (50%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
R +TA++ Y +K K+ G + + T+ + + WG GD G+LG S + +P
Sbjct: 3048 RQITALSSYVVK---KVAVHSG-GRHATALTVDGKVFS-WGEGDDGKLGHFSRMNCDKPR 3102
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
+ A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 3103 LIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT-QLKPKMVKVLLG 3161
Query: 123 KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3162 HRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVC 3219
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A+T G V +WG G RLGHG + + R P++++ L G K+
Sbjct: 3220 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV----RK-----PQVVEGLRGKKI 3270
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVV 294
A G LH + + G+VY +GD D Q+GN R+P+L+ L + V
Sbjct: 3271 VHVAVGALHCLAVTDAGQVYAWGDN--DHG--QQGNGTTTVNRKPTLVQGLEGQKITRVA 3326
Query: 295 CGGYHTCVLTS 305
CG H+ T+
Sbjct: 3327 CGSSHSVAWTT 3337
Score = 316 (116.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 82/263 (31%), Positives = 128/263 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4076 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4135
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ G + + T D ++ WG G+LG G
Sbjct: 4136 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4193
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4194 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR- 4251
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4252 --------RPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ 4303
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4304 RPRLVAALQGKKVNRVACGSAHT 4326
Score = 306 (112.8 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 93/287 (32%), Positives = 130/287 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G ES P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 4023 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4082
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ EVV ++ G HS+ +T G+LY WGK G+LG
Sbjct: 4083 KLGHG-NRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 4141
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P VE L G A G Q++ +T V SWG G G+LG G
Sbjct: 4142 EDQLKP--KLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG------ 4193
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G S P I L G+ V G S + ++G VY +G ++ +H
Sbjct: 4194 G---SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 4250
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP + L + + G H + GE+YTWG N+ G LG G
Sbjct: 4251 RRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4297
Score = 306 (112.8 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 94/292 (32%), Positives = 137/292 (46%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVY 93
++RF L NG S P + ++ +A G H L L TG VY
Sbjct: 461 EKRFLILSRNGRVYTQAYNS--DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY 518
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWG 148
+ G D G+LG + + EP IS K VV I+ G +S+AIT +GELY WG
Sbjct: 519 SWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGS 206
+ + G+LG G + IP+ V L G+ A G Q++AVT G+V SWG G
Sbjct: 578 RGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G G S TP+LI++L+ + V G S + ++G+VY +G
Sbjct: 636 GKLGRG------G---SDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGD 686
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
++ H R P L+ L + +V G H LT E+++WGSN+
Sbjct: 687 NQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND 738
Score = 298 (110.0 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 98/308 (31%), Positives = 142/308 (46%)
Query: 25 GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GG 80
G K + T++ + A G GRLGLG + S P+ +A + +K +A GG
Sbjct: 3010 GGSKSLFAVTVEGKVYAC-GEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGG 3067
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAIT 139
H LT G V++ G D G+LG + +P I LK K + I+ G HS+A+T
Sbjct: 3068 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALT 3126
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGK 197
GELY WG G+LG G ++ P KV L G Q A G Q++A+T G
Sbjct: 3127 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGL 3184
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G G S P+ I+ L G V G S + ++G
Sbjct: 3185 VFSWGDGDFGKLGRG------G---SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3235
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
V+ +G ++ H R+P ++ L + V G H +T G++Y WG N
Sbjct: 3236 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDN 3295
Query: 316 ENGCLGIG 323
++G G G
Sbjct: 3296 DHGQQGNG 3303
Score = 292 (107.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 89/292 (30%), Positives = 141/292 (48%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC-GGAHTLF-LTETGCVYATGLND 99
WG+ G+LG G ++ + P C A +L+ + GG TLF +T G +YATG
Sbjct: 3970 WGHNHRGQLG-GIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGA 4026
Query: 100 FGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ +E++ LE ++ +KK V +++G H A++ +GE+Y WG+ +G+L
Sbjct: 4027 GGRLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4084
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 4085 GHGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD-- 4140
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+L++ L+G +V A G + C+ ++ V+ +GD K+
Sbjct: 4141 -------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4193
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4194 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4245
Score = 277 (102.6 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 76/238 (31%), Positives = 118/238 (49%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2972 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3031
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+L
Sbjct: 3032 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3090
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA + +G +Y +G +
Sbjct: 3091 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3141
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3142 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3199
Score = 277 (102.6 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 85/291 (29%), Positives = 139/291 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLND 99
+WG D +LG G S+ + P ++ +A GG+ +LF +T G VYA G
Sbjct: 2974 VWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVEGKVYACGEAT 3031
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++ WG+ +G+LG
Sbjct: 3032 NGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLG 3091
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3092 HFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD--- 3146
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
+T++ P+++K L G +V A G + + + G V+ +GD K+
Sbjct: 3147 ------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG 3200
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I +L ++ CG + LT G ++TWG + LG G
Sbjct: 3201 SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3251
Score = 275 (101.9 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 86/278 (30%), Positives = 128/278 (46%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-------SD----TLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV +A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Score = 274 (101.5 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 78/248 (31%), Positives = 117/248 (47%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E + P L VQ+ G A+T D
Sbjct: 3958 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALAALRPVQLIGGEQTLFAVTAD 4016
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G + G+LG+G + + PT +E + +F K+ A+ G + +A++ G+V
Sbjct: 4017 GKLYATGYGAGGRLGVG--GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 4074
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G+LGHG RS + PR+I+ L G +V AAG HSAC+ G +
Sbjct: 4075 SWGEAEDGKLGHGN--------RSPCD-RPRVIESLRGTEVVDVAAGGAHSACVTAAGDL 4125
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSN 315
Y +G ++ + +P L+ L +V CG T LT +++WG
Sbjct: 4126 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDG 4185
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 4186 DYGKLGRG 4193
Score = 240 (89.5 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 65/190 (34%), Positives = 97/190 (51%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2964 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3021
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3022 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3075
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3076 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3135
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3136 LGEYGRLGHG 3145
Score = 171 (65.3 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 50/155 (32%), Positives = 76/155 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 689
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVA 191
+ K P P+ L G+ TK A G QS A
Sbjct: 747 RVTK--PEPS---ALPGLDTKHIVGIACGPAQSFA 776
Score = 133 (51.9 bits), Expect = 0.00012, P = 0.00012
Identities = 47/142 (33%), Positives = 65/142 (45%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 4190 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 4247
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + +E G VY G ND GQLG P
Sbjct: 4248 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 4306
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 4307 LVAALQGKKVNRVACGSAHTLA 4328
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 82/292 (28%), Positives = 136/292 (46%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+G+ G+LG+G+ E + W VV A E +S++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVV-EALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRG 68
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---- 156
LG P R+ L ++ Q + G H A+ G Y WG N GQ G
Sbjct: 69 TLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPL 128
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+G+ + I IP + C + +Q A G SV +T G V +WG
Sbjct: 129 KDEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPP------ 180
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
G ++ S P ++ LE V+ + A G H+ ++E+GR+ +G+ ++
Sbjct: 181 -----GDIKQIS--VPVRVQGLENVR--LIAVGAFHNLALEEDGRLLAWGNNEYGQLGTG 231
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P + L ++ GG+H+ LT GE+Y WG E+G LG+G
Sbjct: 232 DTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLG 283
Score = 238 (88.8 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 59/156 (37%), Positives = 90/156 (57%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G + A G N++GQLG + S P+ + GL
Sbjct: 189 PVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS-HPVPVQGL 245
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--KAAKVIPIPTKVECLSGIF 178
+V I+ G HS+A+T GE+Y WG+ +G+LGLG K++K++P KV L+
Sbjct: 246 DDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVP--QKVNLLAEED 303
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 304 IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Score = 235 (87.8 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 72/231 (31%), Positives = 105/231 (45%)
Query: 40 AALWGNGDYGRLGLGSLESRW-RPV----VCS--AFEKHSLKALACGGAHTLFLTETGCV 92
A WG +YG+ G L+ RPV V K +++ +A GG H++ LT G V
Sbjct: 112 AYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHV 171
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ +GQ +I P+R+ GL+ V I+ G H+ A+ DG L WG N
Sbjct: 172 WT-----WGQPWPPGDIKQISVPVRVQGLEN-VRLIAVGAFHNLALEEDGRLLAWGNNEY 225
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG G P+P V+ L + A G S A+T G+V WG G GRLG G
Sbjct: 226 GQLGTGDTQPTSHPVP--VQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLG 283
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+S+ P+ + L + + G HS + +GR++ FG
Sbjct: 284 DNDK-------SSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFG 327
Score = 231 (86.4 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 79/296 (26%), Positives = 138/296 (46%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G LG E++ P A + A GG H L + + G YA G N++
Sbjct: 62 WGWNQRGTLG-HQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 101 GQLG---ISENIGYSLE-----PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN-S 151
GQ G + + +G + P R + K V Q++ G HS +T +G ++ WG+
Sbjct: 121 GQCGEEPLKDEMGRPVRRDIVIPKRCAP-KLTVRQVAAGGTHSVVLTREGHVWTWGQPWP 179
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G + K I +P +V+ L + + A+G ++A+ G++L+WG G+LG
Sbjct: 180 PGDI-------KQISVPVRVQGLENV--RLIAVGAFHNLALEEDGRLLAWGNNEYGQLGT 230
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + TS P ++ L+ + + AAG HS + + G VY +G ++
Sbjct: 231 GDT-------QPTSHPVP--VQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLG 281
Query: 272 FQEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + P ++ L + +V CGG H+ LT G ++++G ++G LG G
Sbjct: 282 LGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 229 (85.7 bits), Expect = 9.7e-19, Sum P(2) = 9.7e-19
Identities = 53/161 (32%), Positives = 88/161 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + PV + +L +A GG H+ LT+ G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ +N S + P +++ L +E ++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 161 AAKVIPI--PTKVECLSGIF--TKQAALGFEQSVAVTGGGK 197
P+ P K+ G F T + G + ++ GG+
Sbjct: 340 VTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGR 380
Score = 206 (77.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 69/240 (28%), Positives = 104/240 (43%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGEL 144
+T T + A G + GQLGI N + + L+ V+ + +G +S AI DG +
Sbjct: 2 VTATSII-AWGSGEDGQLGIGTNEEKEWACV-VEALEPYSVRSVVSGSRNSLAICDDGTM 59
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG N G LG + K IP++V+ L+ + QAA+G +AV G+ +WG
Sbjct: 60 FTWGWNQRGTLG-HQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 205 GSGRLGHGQESSILGF-LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+ G +G +R R +L V+ AAG HS + G V+ +G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLT---VRQVAAGGTHSVVLTREGHVWTWG 175
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ Q P + L + G +H L G L WG+NE G LG G
Sbjct: 176 QPWPPGDIKQ----ISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTG 231
Score = 38 (18.4 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 290 SEEVVCGGYHTCVL 303
++ + CGG HT +
Sbjct: 372 AKSIACGGRHTLAI 385
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 303 (111.7 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 91/286 (31%), Positives = 139/286 (48%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG ++ + PL I L+ V+ QI G HS A++ G++ WG N GQLG
Sbjct: 70 SQLG--HDLP-TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 DK-EIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ Y RL L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ---THCNYPLRLTTLL-GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239
Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Score = 294 (108.6 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 90/283 (31%), Positives = 134/283 (47%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L ++ RP++ + + + + CG H+L L++ G V + G ND GQL
Sbjct: 65 GSNDYSQLG-HDLPTK-RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQL 122
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+
Sbjct: 123 GHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPND 182
Query: 163 KV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G S ++ G V WG G+LG E++
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN----- 237
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
RS Y P +K L + V+ A G S + G V+ G A ++ ++ P
Sbjct: 238 RS---Y-PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 282 SLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
++ +L S +V CG HT L S G +Y +G +G LG
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLG 336
Score = 293 (108.2 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 79/226 (34%), Positives = 121/226 (53%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ D G+LG + E P V ++ +ACG H+L LT G +Y+ G N +G
Sbjct: 114 WGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 102 QLGISE--NIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG++ ++ + PLR++ L + I+ G +HS I+ G ++ WG+N+ GQLGL
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + PT+++ L + + A G E SV +T G V + GAG G+LGHG
Sbjct: 234 DETNR--SYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG------ 285
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
F S++E PR++ EL G + A G H+ A + GRVY FG
Sbjct: 286 -F--SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFG 328
Score = 212 (79.7 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 61/187 (32%), Positives = 89/187 (47%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114
Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A DK + Q R+ L++K ++ CG H+ LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSWGSN 170
Query: 316 ENGCLGI 322
G LG+
Sbjct: 171 IYGQLGV 177
Score = 201 (75.8 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 54/181 (29%), Positives = 95/181 (52%)
Query: 43 WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S P+ + L A+ACGG H+ ++++G V+ G N+
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+++ S P ++ L+ V+ ++ G S +T +G ++ G + GQLG G
Sbjct: 227 CGQLGLNDETNRSY-PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+ +++P +E + T Q A G ++A V G+V ++G G SG+LG S+
Sbjct: 286 FSSNEMLPRMV-MELMGSTIT-QVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSL 343
Query: 218 L 218
+
Sbjct: 344 M 344
Score = 155 (59.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 35/125 (28%), Positives = 60/125 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 37/132 (28%), Positives = 57/132 (43%)
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G ++ WG+ G+LG LG + TP I V+ A G H+
Sbjct: 1 MASGKELYCWGSTSHGQLG-------LGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTL 53
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YSE-EVVCGGYHTCVLTSGGEL 309
+ G+VY G D +RP LI +L Y ++ CG H+ L+ G++
Sbjct: 54 FLTATGKVYACGSN--DYSQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQV 111
Query: 310 YTWGSNENGCLG 321
+WG N+ G LG
Sbjct: 112 LSWGDNDCGQLG 123
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 91/291 (31%), Positives = 135/291 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E P S F K +K++ GG H++ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+ G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLGL----GHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGHGQE 214
K + +P +ECL AA G ++A T G WG G SGR L GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTDTGSTFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ FL + P + LE V A AG HSA + + G +Y++G R L
Sbjct: 194 LPL--FLTAKE---PSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASL 247
Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG 321
P + + +E V G H T G+++TWG + G LG
Sbjct: 248 ATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 224 (83.9 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 77/243 (31%), Positives = 117/243 (48%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S K + ++ G HS +T G L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLL-PQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLGH-TEEVLRF-TICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
G HG ++ P+ I+ L KV AAG H+ + G + +G
Sbjct: 134 GVPHGPRKCVV----------PQAIECLRE-KVVCVAAGLRHALATTDTGSTFQWGTGLA 182
Query: 268 D--KMLFQEGN-----HARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNEN 317
+ L N A+ PS ++ L S VVC G H+ LT GELY WG N++
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLE-SSTVVCAVAGSDHSASLTDTGELYVWGRNKH 241
Query: 318 GCL 320
G L
Sbjct: 242 GQL 244
Score = 173 (66.0 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 57/184 (30%), Positives = 77/184 (41%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A++ L+ WG NS GQLGLG K ++P C SG K G SV VT
Sbjct: 8 SEAVSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCI-KSVTGGGGHSVVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGGLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLLGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
E G+V G A ++ G P I L E+VVC G H T G +
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTDTGSTF 175
Query: 311 TWGS 314
WG+
Sbjct: 176 QWGT 179
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 291 (107.5 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 91/291 (31%), Positives = 135/291 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E + P S F + +K++ GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+ G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLGL----GHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGHGQE 214
K + +P +ECL AA G ++A T G V WG G SGR L GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ FL + P + LE A AG HSA + + G +Y++G R L
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASR 247
Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG 321
P I + +E V G H T G+++TWG + G LG
Sbjct: 248 AVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 239 (89.2 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 86/302 (28%), Positives = 131/302 (43%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
N D G+LGLG E R +C ++ +ACG T+ LTE G V + G N FGQLG
Sbjct: 76 NKD-GQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLG 134
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN--SNGQ-LGLGKKA 161
+ + P I L+++VV ++ G H+ A T G ++ WG S+G+ L G+
Sbjct: 135 VPHGPRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNL 194
Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P++V L A G + S ++T G++ WG R HGQ +S
Sbjct: 195 PLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-----RNKHGQLASRAV 249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------------- 263
FL ++ E KV +G+ H E G+V+ +G
Sbjct: 250 FLPLPQRIEAHYFQD-E--KVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEA 306
Query: 264 DRAV--DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ V D L +G PS + L + E+ CG H + + +WG NE+G G
Sbjct: 307 QKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRD-KCCSWGWNEHGMCG 365
Query: 322 IG 323
G
Sbjct: 366 DG 367
Score = 227 (85.0 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 76/242 (31%), Positives = 118/242 (48%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S + + ++ G HS+ +T G+L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLGH-TEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
G HG ++ P+ I+ L KV AAG H+ G V+ +G
Sbjct: 134 GVPHGPRKCVV----------PQAIECLRE-KVVCVAAGLRHALATTATGSVFQWGTGLA 182
Query: 268 D--KMLFQEGN-----HARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG 318
+ L N A+ PS ++ L S V V G H+ LT GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242
Query: 319 CL 320
L
Sbjct: 243 QL 244
Score = 167 (63.8 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 54/184 (29%), Positives = 76/184 (41%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S ++ L+ WG NS GQLGLG K +P C +G K G S VT
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
E G+V G A ++ G P I L E+VVC G H T+ G ++
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTATGSVF 175
Query: 311 TWGS 314
WG+
Sbjct: 176 QWGT 179
Score = 139 (54.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/175 (29%), Positives = 78/175 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG- 120
P + E + G H+ LT+TG +Y G N GQL S + L P RI
Sbjct: 203 PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA-SRAVFLPL-PQRIEAH 260
Query: 121 --LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---KKAAKVI---------- 165
++V + +G+ H A T G+++ WG+ GQLG +A K +
Sbjct: 261 YFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQG 320
Query: 166 P---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P +P+ + CL+G + + G E ++AV K SWG G G G ES++
Sbjct: 321 PQNSVPSPLHCLTG--ATEISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNV 372
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 90/278 (32%), Positives = 131/278 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + S S+ LACGGAH + LT G V+ G GQ
Sbjct: 20 WGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQ 79
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +L P +S V+ Q + G+ HS ++ G ++ G S GQLG G
Sbjct: 80 LGHGDILNITL-PKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTL 138
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ + P KV + K A G S+ + G +V +G+G G+LG +
Sbjct: 139 S--LSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSD------- 189
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R S P ++ L+ V+V +I+A G HSA I +G+ + +G R F G
Sbjct: 190 RIKSVNLPCVVSGLKDVEVVRISANGD-HSAAISADGQFFSWG-RG-----FCGGPDVHA 242
Query: 281 P-SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
P SL S L + EV G H +LT GE++ GS N
Sbjct: 243 PQSLPSPLSF-REVAVGWNHALLLTVDGEVFKLGSTLN 279
Score = 257 (95.5 bits), Expect = 4.8e-22, P = 4.8e-22
Identities = 73/285 (25%), Positives = 129/285 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + + P + S F+ + A G +H+ F++++GC++ G FGQ
Sbjct: 72 WGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQ 131
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + S P ++S + V+ ++ G HS + ++ +G GQLG
Sbjct: 132 LGHGDTLSLST-PAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDR 190
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQES--SIL 218
K + +P V L + + + + S A++ G+ SWG G G H +S S L
Sbjct: 191 IKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSPL 250
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
F + L+ ++G K+ + L+ E ++ I A LF++
Sbjct: 251 SFREVAVGWNHALLLTVDGEVFKLGST--LNKQ--PEKQQLQIDSSEA----LFEKVPDF 302
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ ++ G H+ +T GE+ TWG E+G LG+G
Sbjct: 303 DGVKVM-------QIAAGAEHSAAVTENGEVKTWGWGEHGQLGLG 340
Score = 255 (94.8 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 91/273 (33%), Positives = 127/273 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GNG +G+LG G S P S F S+K +ACG H+L L V G GQL
Sbjct: 125 GNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQL 184
Query: 104 GISENIGYSLE-PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G S + S+ P +SGLK EVV+IS HS+AI+ DG+ + WG+ G G A
Sbjct: 185 GFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG--GPDVHA 242
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P P LS F ++ A+G+ ++ +T G+V G+ L E L
Sbjct: 243 PQSLPSP-----LS--F-REVAVGWNHALLLTVDGEVFKLGS----TLNKQPEKQQLQI- 289
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+SE + + +GVKV AAG HSA + ENG V +G ++ N P
Sbjct: 290 -DSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSP 348
Query: 282 SLIS----KLPYSE-EVVCGGYHTCVLTSGGEL 309
L+S L E +V CG T + EL
Sbjct: 349 ELVSLGSIDLRTKEIKVYCGSGFTYAVKRKQEL 381
Score = 203 (76.5 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 53/181 (29%), Positives = 90/181 (49%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG ++GQLG K +++P + L I A G +A+T GGKV +WG
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSI--SMLACGGAHVIALTSGGKVFTWG 73
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G SG+LGHG L T P+L+ + + AAAG+ HS + ++G ++
Sbjct: 74 RGSSGQLGHGD------ILNIT---LPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTC 124
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
G+ + ++ + P+ +S + V CG H+ VL +G ++ +GS + G L
Sbjct: 125 GNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQL 184
Query: 321 G 321
G
Sbjct: 185 G 185
Score = 194 (73.4 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 62/228 (27%), Positives = 101/228 (44%)
Query: 92 VYATGLNDFGQLGISENIGYSLEP--LRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
V++ G GQLG ++ + L P L ++ L + ++ G H A+T G+++ WG+
Sbjct: 17 VWSWGAGTDGQLGTTK-LQDELLPQLLSLTSLPS-ISMLACGGAHVIALTSGGKVFTWGR 74
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
S+GQLG G I +P V QAA G+ S V+ G + + G G G+L
Sbjct: 75 GSSGQLGHGDILN--ITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQL 132
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S+ TP + VK+ A G HS + +V FG +
Sbjct: 133 GHGDTLSLS---------TPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQ 183
Query: 270 MLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+ F P ++S L E + G H+ +++ G+ ++WG
Sbjct: 184 LGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWG 231
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 298 (110.0 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 73/218 (33%), Positives = 122/218 (55%)
Query: 111 YSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
YS++ LR + +K+++QI+ G +HS A++ GEL+ WG+N +GQLG+G+K P
Sbjct: 124 YSMKHLRFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTT-P 182
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
VE L+G+ Q + G S+A++ G + SWG G+LG LG S +
Sbjct: 183 QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLG-------LGHTESKDD-- 233
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P LI+ L+ KV+ A G HSA + ++G ++ FG ++ + RP L+++L
Sbjct: 234 PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV 293
Query: 289 -YS-EEVVCGGYHTCVLTSG-GELYTWGSNENGCLGIG 323
Y ++ CG +HT S G+++++GS ++G LG G
Sbjct: 294 GYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Score = 268 (99.4 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 81/265 (30%), Positives = 125/265 (47%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-E 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGLG +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK--DDPSLIEGLDNQKVEFVAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELVGYRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC-- 301
G H+ A + + G+V+ FG D L G + L K+ SEE+ HT
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGS-GKDGQLGNGGTRDQLMPLPVKVSSSEELKLES-HTSEK 359
Query: 302 --VLTSGGE--LYTWGSNENGCLGI 322
++ +GG + W EN + +
Sbjct: 360 ELIMIAGGNQSILLWIKKENSYVNL 384
Score = 210 (79.0 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 49/162 (30%), Positives = 84/162 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGLG ES+ P + + ++ +ACGG+H+ LT+ G ++ G GQ
Sbjct: 215 WGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G +GQLG G
Sbjct: 275 LGHNSTQN-ELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSW 201
+++P+P KV S ++ ++ + + GG + +L W
Sbjct: 334 RDQLMPLPVKVSS-SEELKLESHTSEKELIMIAGGNQSILLW 374
Score = 210 (79.0 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 57/173 (32%), Positives = 90/173 (52%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G S P + L ++ G AH++ L+ +G +Y+ G N+ G
Sbjct: 162 WGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECG 221
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ +P I GL + V+ ++ G HS+ +T DG L+ +G +GQLG
Sbjct: 222 QLGLGHTESKD-DPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNST 280
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 281 QNELRPC--LVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP+ IK + +K+ G H + +G+ + + + ++ H R S++ +
Sbjct: 87 TPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSM--------KHLRFESILQEK 138
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + CG YH+ L+ GGEL+ WG N +G LG+G
Sbjct: 139 KIIQ-ITCGDYHSLALSKGGELFAWGQNLHGQLGVG 173
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 293 (108.2 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 98/301 (32%), Positives = 140/301 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLND 99
WG GRLG G + + P +V S S+ +ACG HT +T G +Y G ++
Sbjct: 305 WGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHN 364
Query: 100 FGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G LG +I + + P RI+G + V +S G H++ IT G L+ +G + G LG
Sbjct: 365 VGLLGHGSDISHWI-PKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGH 423
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
G K + + P +VE LSG+ T + G + AV GK+ +WG G
Sbjct: 424 GDK--ETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGD 481
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
RLGHG + L + T P LI + K+ A G + + +G+V+ G
Sbjct: 482 KNRLGHGDKDPRL---KPTC--VPALI-DYNFHKI---ACGHSLTVGLTTSGQVFTMGS- 531
Query: 266 AVDKMLFQEGNHARRPSLIS-KLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
V L + P L+ KL + EE+ CG YH LTS E+YTWG NG LG
Sbjct: 532 TVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGH 591
Query: 323 G 323
G
Sbjct: 592 G 592
Score = 229 (85.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 71/265 (26%), Positives = 125/265 (47%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLK--KEVVQISTGY 132
+ACG H F+T G ++ G G+LG IG + P + L V ++ G
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLG--HGIGKDVFHPRLVESLTATSSVDFVACGE 343
Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
H+ A+T+ GELY WG ++ G LG G + IP L G+ + G +
Sbjct: 344 FHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIP-KRIAGSLEGLHVASVSCGPWHTA 402
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T G++ ++G G G LGHG + ++ +Y PR ++ L G++ + G H+
Sbjct: 403 LITSYGRLFTFGDGTFGVLGHGDKETV--------QY-PREVESLSGLRTIAVSCGVWHT 453
Query: 251 ACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCG 296
A + E +G+++ +GD +++ + + +P+ + L Y+ ++ CG
Sbjct: 454 AAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACG 513
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
T LT+ G+++T GS G LG
Sbjct: 514 HSLTVGLTTSGQVFTMGSTVYGQLG 538
Score = 218 (81.8 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 55/151 (36%), Positives = 78/151 (51%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G + R +P A ++ +ACG + T+ LT +G V+ G +GQ
Sbjct: 477 WGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQ 536
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + G L L L E V+ IS G +H +A+T E+Y WGK +NG+LG G
Sbjct: 537 LGNLQTDG-KLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLE 595
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT VE L K A G + A+
Sbjct: 596 DR--KVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 214 (80.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 69/228 (30%), Positives = 106/228 (46%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + +V QI+ G H++ +T GE++ WG+ S G+LG G K + P VE
Sbjct: 273 KPLE-SNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHG--IGKDVFHPRLVES 329
Query: 174 LSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTP- 229
L+ + A G + AVT G++ +WG G G LGHG + S + P
Sbjct: 330 LTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSD---------ISHWIPK 380
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
R+ LEG+ V + G H+A I GR++ FGD + + + P + L
Sbjct: 381 RIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSG 440
Query: 290 SEEVV--CGGYHTC-----VLT-------SGGELYTWGSNENGCLGIG 323
+ CG +HT ++T S G+L+TWG + LG G
Sbjct: 441 LRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHG 488
Score = 191 (72.3 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 60/211 (28%), Positives = 98/211 (46%)
Query: 129 STGYHHSSAITVD--GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIF 178
S+ H S+A D G++Y+WG+ ++ ++G+ K A+ + + +P +E +
Sbjct: 223 SSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLD 282
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q A G + VT G++ +WG GRLGHG + + PRL++ L
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDV---------FHPRLVESLTAT 333
Query: 239 K-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS-KLP--YSEE 292
V A G H+ + G +Y +GD + L G+ P I+ L +
Sbjct: 334 SSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVAS 393
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V CG +HT ++TS G L+T+G G LG G
Sbjct: 394 VSCGPWHTALITSYGRLFTFGDGTFGVLGHG 424
Score = 39 (18.8 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
R+ E LI +L+ V K+ + AC+ +NG
Sbjct: 885 RAAKEAIKSLIAQLKDVAEKLPPGESVKLACL-QNG 919
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 280 (103.6 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 99/321 (30%), Positives = 152/321 (47%)
Query: 17 DIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKA 75
D + KL + IS ++ + G GD G+LGLG + R +P + + E ++A
Sbjct: 16 DSTVAKKLKVSH--ISHGQEKGLVLVLGQGDVGQLGLGEDVMERKKPALVTLPEG-IVQA 72
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
+A GG HT+ L++TG VY G ND G LG SE G P ++ L ++++Q+S G
Sbjct: 73 VA-GGMHTVCLSDTGNVYTFGCNDEGALGRDTSEE-GSETVPAKVD-LGEKIIQVSAGDS 129
Query: 134 HSSAITVDGELYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS+A+T DG +Y+WG +++NG +GL + K +P KV + + G + V
Sbjct: 130 HSAALTEDGGVYVWGSFRDNNGVIGL-LEPMKKCTVPVKVPIDKPVV--KIVSGNDHLVM 186
Query: 192 VTGGGKVLSWGAGGSGRLGHGQE-----SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+T G++ + G G G+LG E G +R E +IK V G
Sbjct: 187 LTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLL-EPQMVIIKPRGKVVFTDVFCG 245
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV---VCGG-YHTCV 302
+ + + G VY FG ++ Q N P +S S GG +HT
Sbjct: 246 AYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLC 305
Query: 303 LTSGGELYTWGSNENGCLGIG 323
L S G+ Y+ G E G LG+G
Sbjct: 306 LNSEGKAYSLGRAEYGRLGLG 326
Score = 188 (71.2 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 48/140 (34%), Positives = 73/140 (52%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV---VQISTGYHH 134
CG T +++ G VY GL+++ QLG +++ P+++S K V S G HH
Sbjct: 244 CGAYFTFAVSKEGHVYGFGLSNYHQLG-TQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHH 302
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLGK + PT V +S + + A G S AVT
Sbjct: 303 TLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSE-PTVVPGISDV--QVVACGASVSYAVTK 359
Query: 195 GGKVLSWGAGGSGRLGHGQE 214
G V SWG G + +LG G+E
Sbjct: 360 QGSVFSWGMGTNLQLGTGEE 379
Score = 169 (64.5 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 73/296 (24%), Positives = 123/296 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--NDF 100
+G D G LG + E V + ++ G +H+ LTE G VY G ++
Sbjct: 91 FGCNDEGALGRDTSEEGSETVPAKVDLGEKIIQVSAGDSHSAALTEDGGVYVWGSFRDNN 150
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL--- 157
G +G+ E + P+++ + K VV+I +G H +T GELY G GQLG
Sbjct: 151 GVIGLLEPMKKCTVPVKVP-IDKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAE 209
Query: 158 ------GKKAAKVIPIPTKVECLS-G--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+K + P V G +FT G + AV+ G V +G +
Sbjct: 210 HFANRGGRKGLMRLLEPQMVIIKPRGKVVFT-DVFCGAYFTFAVSKEGHVYGFGLSNYHQ 268
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG ++ ++ +S K V + G H+ C++ G+ Y G
Sbjct: 269 LGTQSTNTCFVPVKLSS------FKNSTTSWVGFSG-GQHHTLCLNSEGKAYSLGRAEYG 321
Query: 269 KM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L ++ P+++ + + V CG + +T G +++WG N LG G
Sbjct: 322 RLGLGKDVGEKSEPTVVPGISDVQVVACGASVSYAVTKQGSVFSWGMGTNLQLGTG 377
Score = 167 (63.8 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 38/127 (29%), Positives = 68/127 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDF 100
+G +Y +LG S + + PV S+F+ + + G HTL L G Y+ G ++
Sbjct: 261 FGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEY 320
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG+ +++G EP + G+ +V ++ G S A+T G ++ WG +N QLG G++
Sbjct: 321 GRLGLGKDVGEKSEPTVVPGIS-DVQVVACGASVSYAVTKQGSVFSWGMGTNLQLGTGEE 379
Query: 161 AAKVIPI 167
+ P+
Sbjct: 380 EDEWSPV 386
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 294 (108.6 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 97/318 (30%), Positives = 146/318 (45%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
++ +LK DI + G + R F ++G+ + G+LGL +PV +
Sbjct: 27 SRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVKVLK 84
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
+++ACG HTL T G + A G N GQLG+ N S + LR + +
Sbjct: 85 GERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLL 144
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G H S+A+T DG L++WG NS GQLG G + ++P K E G + G+
Sbjct: 145 SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP---K-ELNMGQSIHWVSCGYRH 200
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G V S+G GRLG L + S Y P+ ++ L V +++A G
Sbjct: 201 SALVTDSGDVYSFGESADGRLGLSAHQ-----LANHS-Y-PQRVESLHSV-LQVACGG-K 251
Query: 249 HSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTS 305
H+ + E+ +Y FG ++ L A P + V CG H+ ++T
Sbjct: 252 HTLALTED-ELYCFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITD 310
Query: 306 GGELYTWGSNENGCLGIG 323
G LYT+G +G LG G
Sbjct: 311 SGLLYTFGDGRHGKLGHG 328
Score = 266 (98.7 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 70/226 (30%), Positives = 119/226 (52%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FG+ I+ N+ P R+ LK ++ V IS G HS+ +T G L+++G N+ GQLGL
Sbjct: 16 FGKSKIANNV-----PSRL-WLKSDIPVHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQ 69
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K P+ KV L G + A G + ++ T G++L+ G G+LG G + +
Sbjct: 70 IKGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSI 127
Query: 219 GF--LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
F LR +Y P +K+ +AG SA + E+GR++++GD + ++ F +
Sbjct: 128 SFQRLRPFCDYAP----------IKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDS 177
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
HA P ++ V CG H+ ++T G++Y++G + +G LG+
Sbjct: 178 HALLPKELNMGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGL 223
Score = 217 (81.4 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 66/210 (31%), Positives = 103/210 (49%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG+ G+LG G+ P + + S+ ++CG H+ +T++G VY+ G + G
Sbjct: 162 LWGDNSAGQLGFGNDSHALLPKELNMGQ--SIHWVSCGYRHSALVTDSGDVYSFGESADG 219
Query: 102 QLGISEN-IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG+S + + P R+ L V+Q++ G H+ A+T D ELY +G GQLGLG
Sbjct: 220 RLGLSAHQLANHSYPQRVESLHS-VLQVACGGKHTLALTED-ELYCFGGGEFGQLGLGTL 277
Query: 161 AAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
V P V G T G + S +T G + ++G G G+LGHG E+
Sbjct: 278 VF-VADSPVAVGHFRKGRVT-HVTCGEQHSALITDSGLLYTFGDGRHGKLGHGDEN---- 331
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
F T+++TP + + V A G H
Sbjct: 332 F---TNQFTPTVCQRFFEYSVMTVACGSSH 358
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 289 (106.8 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 88/333 (26%), Positives = 154/333 (46%)
Query: 9 MTKYYLKQDIKLGSKLGICK-RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
+T L+ ++ L +C R ++ ++ WG GRLG G RP +
Sbjct: 240 LTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEF 299
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK-- 123
++ +ACG HT ++ +G +++ G+++ G LG +I + + P R+SG +
Sbjct: 300 LALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWI-PKRVSGPLEGL 358
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V+ ++ G HS+ T +G+L+ +G + G LG G + + + P +V+ L+G+ T + A
Sbjct: 359 QVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKTVKVA 416
Query: 184 LGFEQSVAVT----------GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ A+ K+ +WG G RLGHG + + L P +
Sbjct: 417 CSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYL---------LPTCVS 467
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KL--PYS 290
L A G + + +G V+ G A + L + + P L+ +L +
Sbjct: 468 SLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQ-LGNSISDGKLPCLVQDRLVGEFV 526
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
EE+ CG +H VLTS E++TWG NG LG G
Sbjct: 527 EEIACGAHHVAVLTSRSEVFTWGKGANGRLGHG 559
Score = 207 (77.9 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 82/299 (27%), Positives = 132/299 (44%)
Query: 43 WGNG--DYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G + G LG GS S W P V E + ++ACG H+ T G ++ G
Sbjct: 327 WGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGA 386
Query: 100 FGQLGIS--ENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-VDGE---------LYMW 147
FG LG E++ Y E ++GLK V+++ H++AI V G+ L+ W
Sbjct: 387 FGVLGHGNRESVSYPKEVQSLNGLK--TVKVACSIWHTAAIVEVMGQTATSMSSRKLFTW 444
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G +LG G K ++P T V L + A G +VA+T G V + G G
Sbjct: 445 GDGDKNRLGHGNKETYLLP--TCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHG 502
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG+ L P L+++ L G V+ A G H A + V+ +G A
Sbjct: 503 QLGNSISDGKL----------PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGA 552
Query: 267 VDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTW--GSNENGCLG 321
++ + R P+L+ L + + + CG T + ++ W G++++ C G
Sbjct: 553 NGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSIC----IHKWVSGADQSICSG 607
Score = 204 (76.9 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 56/164 (34%), Positives = 82/164 (50%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
++++ R WG+GD RLG G+ E+ P S+ ++ +ACG T+ LT +G
Sbjct: 433 ATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGH 492
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKN 150
V+ G GQLG S + G L L L E V+ I+ G HH + +T E++ WGK
Sbjct: 493 VFTMGGTAHGQLGNSISDG-KLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKG 551
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
+NG+LG G K PT VE L K + G F S+ +
Sbjct: 552 ANGRLGHGDTEDK--RTPTLVEALRDRHVKSLSCGSNFTSSICI 593
Score = 157 (60.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 51/192 (26%), Positives = 85/192 (44%)
Query: 142 GELYMWGKN-SNGQLGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGG 196
G++Y+WG+ + G L G + + + P +E + Q G VT G
Sbjct: 211 GDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQG 270
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V +WG GRLGHG + I P+L++ L + A G H+ + +
Sbjct: 271 EVFTWGEEVGGRLGHGIQVDIS---------RPKLVEFLALTNIDFVACGEYHTCVVSTS 321
Query: 257 GRVYIFGDRAVDKMLFQEGNHARR--PSLIS-KLPYSE--EVVCGGYHTCVLTSGGELYT 311
G ++ +GD + L G+ P +S L + V CG +H+ + T+ G+L+T
Sbjct: 322 GDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFT 381
Query: 312 WGSNENGCLGIG 323
+G G LG G
Sbjct: 382 FGDGAFGVLGHG 393
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 288 (106.4 bits), Expect = 3.8e-24, P = 3.8e-24
Identities = 72/218 (33%), Positives = 118/218 (54%)
Query: 111 YSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
YS+E R + +K ++QI+ G +HS A++ GEL+ WG+N +GQLG+G+ A P
Sbjct: 134 YSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFAST-STP 192
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
VE LSG+ Q + G S+A++ G V SWG G+LG G + ++ +
Sbjct: 193 EIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGH---------TYNKES 243
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P I+ L+ KV+ A G H+A + ++G V+ FGD ++ + RP L++ L
Sbjct: 244 PSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLV 303
Query: 289 YSE--EVVCGGYHTCVLTSG-GELYTWGSNENGCLGIG 323
+ ++ CG HT S G+++++GS + G LG G
Sbjct: 304 GNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNG 341
Score = 253 (94.1 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 82/268 (30%), Positives = 127/268 (47%)
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK- 123
C EK+ ++ + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 143 CILQEKNIIQ-ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGV 201
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+VQIS G HS A+++ G +Y WG+N GQLGLG K P+ +E L + A
Sbjct: 202 PLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNK--ESPSCIEALDDQKVEFLA 259
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + +T G V ++G G G+LGH + +E PRL+ L G +V
Sbjct: 260 CGGCHTALLTKSGLVFTFGDGKYGQLGHNS---------TQNELRPRLVTGLVGNRVTQI 310
Query: 244 AAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYH 299
A G H+ A + + G+V+ FG ++ GN R LI KL SEE+
Sbjct: 311 ACGRQHTLAYVSDTGKVFSFGSGKEGQL----GNGGTRNQLIPRPMKLLSSEELKSESST 366
Query: 300 TC---VLTSGGE--LYTWGSNENGCLGI 322
+ ++ +GG + W EN + +
Sbjct: 367 SVKELIMVAGGNQSILIWMEKENSYVNL 394
Score = 228 (85.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG ++ P A + ++ LACGG HT LT++G V+ G +GQ
Sbjct: 225 WGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQ 284
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++GL V QI+ G H+ A D G+++ +G GQLG G
Sbjct: 285 LGHNSTQN-ELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGT 343
Query: 161 AAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGK-VLSW 201
++IP P K+ LS K +++ ++ + V GG + +L W
Sbjct: 344 RNQLIPRPMKL--LSSEELKSESSTSVKELIMVAGGNQSILIW 384
Score = 193 (73.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 57/174 (32%), Positives = 90/174 (51%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG+G + S P + L ++ G AH++ L+ +G VY+ G ND G
Sbjct: 172 WGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCG 231
Query: 102 QLGISENIGYSLE-PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ Y+ E P I L + V+ ++ G H++ +T G ++ +G GQLG
Sbjct: 232 QLGLGHT--YNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNS 289
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L G Q A G + ++A V+ GKV S+G+G G+LG+G
Sbjct: 290 TQNELRP--RLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNG 341
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 278 (102.9 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 91/294 (30%), Positives = 135/294 (45%)
Query: 40 AAL--WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATG 96
AAL WG YG+LGLG E S F K +K + GG H+ +T+ G ++ G
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCG 74
Query: 97 LNDFGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LN GQLG+ +E + Y P + S L + Q++ G+ + +T +G++ G NS GQ
Sbjct: 75 LNKDGQLGLGHTEEVLY-FTPCK-SLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQ 132
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGH 211
LG+ + + IP +E L AA G ++A T G V WG G SGR L
Sbjct: 133 LGVPHGPRRCV-IPQAIELLREKVVSIAA-GLRHALAATASGTVFQWGTGLASSGRRLCP 190
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
GQ + FL + P + LE + AG HSA + + G +Y++G ++
Sbjct: 191 GQTLPL--FLTAKE---PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLA 245
Query: 272 FQEGNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG 321
Q P I + E + G H T G+++TWG + G LG
Sbjct: 246 SQAA-FLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLG 298
Score = 245 (91.3 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 84/302 (27%), Positives = 130/302 (43%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
N D G+LGLG E C + +++ +ACG T+ LTE G V + G N FGQLG
Sbjct: 76 NKD-GQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLG 134
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN--SNGQLGLGKKAA 162
+ + P I L+++VV I+ G H+ A T G ++ WG S+G+ +
Sbjct: 135 VPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTL 194
Query: 163 KVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + ++G+ QA G + S ++T G++ WG+ HGQ +S
Sbjct: 195 PLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNK-----HGQLASQAA 249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--D-----RAV----- 267
FL R + K+ +G+ H G+V+ +G D R V
Sbjct: 250 FLLLPQRIEARCF---QNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREG 306
Query: 268 ------DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
D L G PS + L + E+ CG H + GG ++WG NE+G G
Sbjct: 307 WESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVI-GGVCHSWGWNEHGMCG 365
Query: 322 IG 323
G
Sbjct: 366 DG 367
Score = 160 (61.4 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 55/186 (29%), Positives = 76/186 (40%)
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H S A+ L+ WG NS GQLGLG K + C SG K+ G S V
Sbjct: 6 HSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCI-KRITGGGGHSAVV 64
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G + G G+LG G +L F TP K L G ++ A G+ +
Sbjct: 65 TDEGSLFVCGLNKDGQLGLGHTEEVLYF-------TP--CKSLLGCAIQQVACGWDFTII 115
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR---PSLISKLPYSEEVVCGGY-HTCVLTSGGE 308
+ ENG+V G + ++ G RR P I L + G H T+ G
Sbjct: 116 LTENGQVLSCGSNSFGQLGVPHG--PRRCVIPQAIELLREKVVSIAAGLRHALAATASGT 173
Query: 309 LYTWGS 314
++ WG+
Sbjct: 174 VFQWGT 179
Score = 147 (56.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 49/175 (28%), Positives = 77/175 (44%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + E + G H+ LT+ G +Y G N GQL + + L P RI
Sbjct: 203 PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQL--ASQAAFLLLPQRIEAR 260
Query: 122 ---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL------GKKAAKVIP------ 166
+++ + +G+ H A TV G+++ WG+ GQLG G ++ K P
Sbjct: 261 CFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSG 320
Query: 167 ----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P+ + CL+G + + G E ++AV GG SWG G G G E+ +
Sbjct: 321 PQKGTPSCLPCLTG--ATEISCGSEHNLAVIGG-VCHSWGWNEHGMCGDGTEADV 372
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 86/287 (29%), Positives = 129/287 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E P S F K +K + GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ L S L + Q++ G+ + +T +G++ G NS GQLG+
Sbjct: 80 QLGLGHTEDVLYFTLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQLGVPHGP 139
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGHGQESSIL 218
+ + +P +E AA G ++A T G V WG G SGR L GQ +
Sbjct: 140 RRCV-VPQAIEVQREKVVSIAA-GLRHALAATASGLVFQWGTGLASSGRRLCPGQTLPL- 196
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
FL T++ ++ LE + AG HSA + + G +Y++G ++ Q
Sbjct: 197 -FL--TAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLASQAA-FL 252
Query: 279 RRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG 321
P I + E V G H T G+++TWG + G LG
Sbjct: 253 PLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 230 (86.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 78/243 (32%), Positives = 119/243 (48%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S K V +I+ G HS+ +T G L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLL-PQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLGH-TEDVLYF-TLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGSNSFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR-A 266
G HG ++ P+ I E++ KV AAG H+ +G V+ +G A
Sbjct: 134 GVPHGPRRCVV----------PQAI-EVQREKVVSIAAGLRHALAATASGLVFQWGTGLA 182
Query: 267 VDKMLFQEGNH------ARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNEN 317
G A+ PS ++ + + VC G H+ LT GELY WGSN++
Sbjct: 183 SSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKH 242
Query: 318 GCL 320
G L
Sbjct: 243 GQL 245
Score = 196 (74.1 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 64/184 (34%), Positives = 96/184 (52%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFE--KHSLKALACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E + + ++A G H L T +G V+ TGL
Sbjct: 126 GSNSFGQLGVP--HGPRRCVVPQAIEVQREKVVSIAAGLRHALAATASGLVFQWGTGLAS 183
Query: 100 FGQ-LGISENIGYSL---EPLRIS-GLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G+ L + + L EP +++ GL+ + V + G HS+++T GELY+WG N +G
Sbjct: 184 SGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHG 243
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QL +AA +P+P K+E K AA+ G+ VA T GKV +WG G+LG
Sbjct: 244 QLA--SQAA-FLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLGR 300
Query: 212 GQES 215
ES
Sbjct: 301 TLES 304
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 92/294 (31%), Positives = 133/294 (45%)
Query: 40 AAL--WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATG 96
AAL WG YG+LGLG E P + F K S++ + GG H+ +T+ G ++ G
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCG 74
Query: 97 LNDFGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LN GQLG+ +E+I Y + G + Q++ G+ + +T +G++ G NS GQ
Sbjct: 75 LNKDGQLGLGHTEDIPYFTPCKSLFGCP--IQQVACGWDFTIMLTENGQVLSCGSNSFGQ 132
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGH 211
LG+ + + +P +E AA G +VA T G V WG G GR L
Sbjct: 133 LGVPHGPRRCV-VPQAIELHKEKVVCIAA-GLRHAVAATASGIVFQWGTGLASCGRRLCP 190
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
GQ L + E P + LE K AG HSA + + G VY++G + L
Sbjct: 191 GQT---LPLFFTAKE--PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ-L 244
Query: 272 FQEGNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG 321
E P I + E V G H T G+++TWG + G LG
Sbjct: 245 ANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 195 (73.7 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 60/183 (32%), Positives = 95/183 (51%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 126 GSNSFGQLGVP--HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 183
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 184 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 243
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
L +AA +P+P K+E K A+ G+ VA T GK+ +WG G+LG
Sbjct: 244 LA--NEAA-FLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 300
Query: 213 QES 215
E+
Sbjct: 301 LET 303
Score = 156 (60.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 54/189 (28%), Positives = 79/189 (41%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A L+ WG NS GQLGLG K ++P C ++ G S VT
Sbjct: 8 SEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRS-VRRITGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG LG +TP K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLG-------LGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YSEEVVC---GGYHTCVLTSGGELY 310
ENG+V G + ++ G RR + + + E+VVC G H T+ G ++
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHG--PRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVF 175
Query: 311 TWGSNENGC 319
WG+ C
Sbjct: 176 QWGTGLASC 184
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 284 (105.0 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 79/260 (30%), Positives = 134/260 (51%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVV 126
++ ++++ CG E G V L D G++ + + Y++ PL+ GL +V+
Sbjct: 77 KREKIRSIVCG--------EDGAVL---LADGGKVLLMDK--YTVCRPLK--GLDNTKVI 121
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QI+ G HS A++ DG+L++WG+N++GQLGL K+ A +I P ++ L GI Q + G
Sbjct: 122 QIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQA-LIQSPQHLQSLCGIPVAQISAGG 180
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S ++ G V WG+ +G+LG G +T + P ++K L G K + G
Sbjct: 181 NHSFVLSLSGVVFGWGSNSAGQLGLGD---------TTDRFVPTIVKSLSGKKTVSISCG 231
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLT 304
H+A + + G V+ FG ++ P L+++L S+ +V CG +HT VL
Sbjct: 232 GEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLV 291
Query: 305 S-GGELYTWGSNENGCLGIG 323
+ +Y++G G LG G
Sbjct: 292 ALTNRIYSFGCGMQGQLGNG 311
Score = 188 (71.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 43/154 (27%), Positives = 77/154 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LGLG R+ P + + +++CGG HT L++ G V+ G FGQ
Sbjct: 195 WGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ 254
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG ++ P ++ L +V Q++ G HH+ + + +Y +G GQLG G++
Sbjct: 255 LG-HNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQ 313
Query: 161 AAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAV 192
+ +P+P + +C ++ G + S A+
Sbjct: 314 VKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347
Score = 165 (63.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG +G+LGL ++ + P + + ++ GG H+ L+ +G V+ G N
Sbjct: 141 VWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSA 200
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ + + P + L K+ V IS G H++ ++ G ++ +G GQLG
Sbjct: 201 GQLGLGDTTDRFV-PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLG--H 257
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQS-VAVTGGGKVLSWGAGGSGRLGHGQE 214
+ K P V L G Q G + V V ++ S+G G G+LG+G++
Sbjct: 258 NSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQ 313
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 266 (98.7 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 79/291 (27%), Positives = 131/291 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ E + V A E +++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P + L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + I IP + C + +Q A G SV +T G V +WG
Sbjct: 130 DETGRPVRRDIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPP------- 180
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V+ + A G H+ + E+G ++ +G+ ++ +
Sbjct: 181 ----GDIKQIS--VPVRVQGLENVR--LIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L ++ GG+H+ LT+ GE+Y WG E+G LG G
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFG 283
Score = 251 (93.4 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 73/231 (31%), Positives = 109/231 (47%)
Query: 40 AALWGNGDYGRLGLG-SLESRWRPV----VCS--AFEKHSLKALACGGAHTLFLTETGCV 92
A WG +YG+ G S + RPV V ++ +++ +A GG H++ LT G V
Sbjct: 112 AYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYV 171
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ +GQ +I P+R+ GL+ V I+ G H+ A+ DG L+ WG N
Sbjct: 172 WT-----WGQPWPPGDIKQISVPVRVQGLEN-VRLIAVGAFHNLALKEDGTLWAWGNNEY 225
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG G + PIP V+ L + A G S A+T G+V WG G GRLG G
Sbjct: 226 GQLGTGDTQPRSYPIP--VQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFG 283
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+S+ P+ + L G + + G HS + +GR++ FG
Sbjct: 284 DNDK-------SSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFG 327
Score = 249 (92.7 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 59/156 (37%), Positives = 92/156 (58%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G ++A G N++GQLG + S P+ + GL
Sbjct: 189 PVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSY-PIPVQGL 245
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--KAAKVIPIPTKVECLSGIF 178
+V I+ G HS+A+T +GE+Y WG+ +G+LG G K++K++P KV L+G
Sbjct: 246 DDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLP--QKVNLLAGED 303
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 304 IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Score = 215 (80.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 78/294 (26%), Positives = 135/294 (45%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G LG ++ P + + + A GG H L + + G YA G N++G
Sbjct: 62 WGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 121
Query: 102 QLGISENIGYSLEPLR--ISGLKK-----EVVQISTGYHHSSAITVDGELYMWGKN-SNG 153
Q G + + P+R I K+ V Q++ G HS +T +G ++ WG+ G
Sbjct: 122 QCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPG 181
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ K I +P +V+ L + + A+G ++A+ G + +WG G+LG G
Sbjct: 182 DI-------KQISVPVRVQGLENV--RLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
RS Y P ++ L+ + + AAG HS + G VY +G ++ F
Sbjct: 233 TQP-----RS---Y-PIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFG 283
Query: 274 EGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + P ++ L + +V CGG H+ LT G ++++G ++G LG G
Sbjct: 284 DNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 214 (80.4 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 45/127 (35%), Positives = 72/127 (56%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R P+ + +L +A GG H+ LT G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P +++ L E ++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 161 AAKVIPI 167
P+
Sbjct: 340 VTTGQPL 346
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 67/234 (28%), Positives = 100/234 (42%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
V A G + GQLG+ + L + + L+ V + G +S AI DG+L+ WG N
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASV-VDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWN 65
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G LG + K P+ V+ L+ + QAA+G +AV G+ +WG G+ G
Sbjct: 66 QRGTLGHPPET-KTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 211 HGQESSILGF-LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G +R R ++L V+ AAG HS + G V+ +G
Sbjct: 125 EEPSKDETGRPVRRDIVIPKRCAQQLT---VRQVAAGGTHSVVLTREGYVWTWGQPWPPG 181
Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ Q P + L + G +H L G L+ WG+NE G LG G
Sbjct: 182 DIKQ----ISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTG 231
Score = 39 (18.8 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 290 SEEVVCGGYHTCVL 303
++ V CGG HT +
Sbjct: 372 AKHVACGGRHTLAI 385
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 271 (100.5 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 92/295 (31%), Positives = 150/295 (50%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG S+ R +P + + ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGESVLERKKPALVPLLQD-VVQAEA-GGMHTVCLSQSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES-SIL 218
K + +P +V+ L K A+ G + V +T G + + G G G+LG E +
Sbjct: 158 PMKKSM-VPVQVQ-LDAPVVKVAS-GNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANR 214
Query: 219 GFLRSTSEY-TPR--LIKE--LEG-VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
G + PR L+K G V+ + A G + I G VY FG ++
Sbjct: 215 GGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGT 274
Query: 273 QEGNHARRPSLISKLPYSEEV---VCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ S + GG +HT + S G+ Y+ G E G LG+G
Sbjct: 275 PGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG 329
Score = 202 (76.2 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 82/300 (27%), Positives = 129/300 (43%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LTE G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + +P V S G + + A G + A++ G V +G
Sbjct: 208 PELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLS 267
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+LG S F+ K G + G H+ C+D G+ Y G
Sbjct: 268 NYHQLGTPGTGSC--FIPQNLTSFKNSTKSWVGF-----SGGQHHTVCMDSEGKAYSLGR 320
Query: 265 RAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ EG + P+LIS+LP V CG ++ G ++ WG N LG G
Sbjct: 321 AEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTG 380
Score = 176 (67.0 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 53/179 (29%), Positives = 83/179 (46%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + G P ++ K K V S G HH
Sbjct: 247 CGAYFTFAISREGHVYGFGLSNYHQLG-TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A + IPT + L + A G AV+
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEK-SIPTLISRLPVV--SSVACGASVGYAVSK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQ+ + T K+LE V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG-------KQLENRVVLTVSSGGQHTVLL 414
Score = 170 (64.9 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 52/183 (28%), Positives = 84/183 (45%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ E++ +P + L ++VVQ G H+ ++
Sbjct: 26 SHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP-LLQDVVQAEAGGMHTVCLSQ 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L+ VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDAPVVKVAS-GNDHLVMLTNDGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAH-TLFLTETGCVYATGLND 99
+G +Y +LG S + P ++F K+S K+ GG H T+ + G Y+ G +
Sbjct: 264 FGLSNYHQLGTPGTGSCFIPQNLTSF-KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAE 322
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G+LG+ E P IS L V ++ G A++ DG ++ WG +N QLG G+
Sbjct: 323 YGRLGLGEGAEEKSIPTLISRLPV-VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQ 381
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 273 (101.2 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 92/294 (31%), Positives = 133/294 (45%)
Query: 40 AAL--WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATG 96
AAL WG YG+LGLG E P + F K S++ + GG H+ +T+ G ++ G
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCG 74
Query: 97 LNDFGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LN GQLG+ +E+I Y + G + Q++ G+ + +T +G++ G NS GQ
Sbjct: 75 LNKDGQLGLGHTEDIPYFTPCKSLFGCP--IQQVACGWDFTIMLTENGQVLSCGSNSFGQ 132
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGR-LGH 211
LG+ + + +P +E AA G +VA T G V WG G GR L
Sbjct: 133 LGVPHGPRRCV-VPQAIELHKEKVVCIAA-GLRHAVAATASGIVFQWGTGLASCGRRLCP 190
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
GQ L + E P + LE K AG HSA + + G VY++G + L
Sbjct: 191 GQT---LPLFFTAKE--PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ-L 244
Query: 272 FQEGNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG 321
E P I + E V G H T G+++TWG + G LG
Sbjct: 245 ANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 235 (87.8 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 87/307 (28%), Positives = 137/307 (44%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
N D G+LGLG E C + ++ +ACG T+ LTE G V + G N FGQLG
Sbjct: 76 NKD-GQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLG 134
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-- 162
+ + P I K++VV I+ G H+ A T G ++ WG G G++
Sbjct: 135 VPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWG---TGLASCGRRLCPG 191
Query: 163 KVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ +P+ P++V L G + S ++T G+V WG+ HGQ ++
Sbjct: 192 QTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK-----HGQLAN 246
Query: 217 ILGFLRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFG--D-----RAV 267
FL P+ I+ + KV +G+ H E G+++ +G D R +
Sbjct: 247 EAAFLP-----VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKL 301
Query: 268 D-----KMLFQEG--NHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ K+ Q+ +R P+ + P+ + EV CG H + GG Y+WG NE
Sbjct: 302 ETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWNE 360
Query: 317 NGCLGIG 323
+G G G
Sbjct: 361 HGMCGDG 367
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 54/189 (28%), Positives = 79/189 (41%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A L+ WG NS GQLGLG K ++P C ++ G S VT
Sbjct: 8 SEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRS-VRRITGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG LG +TP K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLG-------LGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YSEEVVC---GGYHTCVLTSGGELY 310
ENG+V G + ++ G RR + + + E+VVC G H T+ G ++
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHG--PRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVF 175
Query: 311 TWGSNENGC 319
WG+ C
Sbjct: 176 QWGTGLASC 184
Score = 143 (55.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 49/175 (28%), Positives = 76/175 (43%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG- 120
P + E + G H+ LT+ G VY G N GQL + + P +I
Sbjct: 203 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL--ANEAAFLPVPQKIEAH 260
Query: 121 --LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL------GKKAAK---VIP--- 166
++V I +G+ H A T G+++ WG+ GQLG G K K +P
Sbjct: 261 CFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSR 320
Query: 167 ----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+P+ CL+G + + G E ++A+ GG SWG G G G E+++
Sbjct: 321 PPNSMPSSPHCLTG--ATEVSCGSEHNLAIIGG-VCYSWGWNEHGMCGDGTEANV 372
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 281 (104.0 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 68/210 (32%), Positives = 110/210 (52%)
Query: 118 ISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ GL+ ++V+QI+ G HS A+T DG+L++WG+N+ GQLGL K+ A P ++ L G
Sbjct: 110 LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGT-QSPQHLQSLCG 168
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
I Q + G S ++ G V WG+ +G+LG G +T + P ++K L
Sbjct: 169 IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGD---------TTDRFIPTIVKSLS 219
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
G K + G H+A + + G V+ FG ++ P L+++L S+ +V
Sbjct: 220 GKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVT 279
Query: 295 CGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
CG +HT V S ++Y++G G LG G
Sbjct: 280 CGRHHTLVFEDSSNQIYSFGCGMQGQLGNG 309
Score = 280 (103.6 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 72/205 (35%), Positives = 106/205 (51%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
RP+ E + +ACG H++ LT G ++ G N GQLG+ + + P +
Sbjct: 108 RPL--KGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQS 165
Query: 121 LKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L V QIS G +HS +++ G ++ WG NS GQLGLG + IP T V+ LSG T
Sbjct: 166 LCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIP--TIVKSLSGKKT 223
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ G E + ++ GG V ++G+GG G+LGH L+ E+ PRL+ EL G K
Sbjct: 224 VSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNS-------LKD--EHHPRLVAELWGSK 274
Query: 240 VKIAAAGFLHSACI-DENGRVYIFG 263
V G H+ D + ++Y FG
Sbjct: 275 VSQVTCGRHHTLVFEDSSNQIYSFG 299
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 44/149 (29%), Positives = 74/149 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LGLG R+ P + + +++CGG HT L++ G V+ G FGQ
Sbjct: 193 WGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ 252
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAIT-VDGELYMWGKNSNGQLGLGKK 160
LG ++ P ++ L +V Q++ G HH+ ++Y +G GQLG G++
Sbjct: 253 LG-HNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQ 311
Query: 161 AAKVIPIPTKV--ECLSGIFTKQAALGFE 187
+ +P+P + EC FT + + E
Sbjct: 312 VKQSVPLPVLLPTECTE--FTMEKLIAGE 338
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 37/131 (28%), Positives = 68/131 (51%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
++ S G +G + + +L +ST R +K LE +V A G HS + +
Sbjct: 78 RIRSIVCGEAGAVLLADDGKVLVMDQST---VCRPLKGLENRQVIQIACGDQHSMALTND 134
Query: 257 GRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTW 312
G+++++G+ A+ ++ L +E + P + L P ++ + GG H+ VL+ G ++ W
Sbjct: 135 GQLFVWGENALGQLGLRKEQAGTQSPQHLQSLCGIPVAQ-ISAGGNHSFVLSLSGVVFGW 193
Query: 313 GSNENGCLGIG 323
GSN G LG+G
Sbjct: 194 GSNSAGQLGLG 204
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 271 (100.5 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 92/295 (31%), Positives = 152/295 (51%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPED-IVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++V+Q+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVD-LQEKVIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ LS K A+ G + V +T G + + G+G G+LG E
Sbjct: 158 PMKKSM-VPVQVQ-LSVPVVKVAS-GNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
R E P+ + + G V+ + A G + I G VY FG ++
Sbjct: 215 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGT 274
Query: 273 QEGNHARRPSLISKLPYSEEV---VCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
Q P ++ S + GG +HT + S G+ Y+ G E G LG+G
Sbjct: 275 QGTESCFVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG 329
Score = 220 (82.5 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 85/301 (28%), Positives = 132/301 (43%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LTE G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVDLQEK--VIQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +TVDG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LSVPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + + +P V S G + + A G + A++ G V +G
Sbjct: 208 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLS 267
Query: 205 GSGRLG-HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LG G ES F+ K G + G H+ C+D G+ Y G
Sbjct: 268 NYHQLGTQGTESC---FVPQNLTSFKNSTKSWVGF-----SGGQHHTVCMDSEGKAYSLG 319
Query: 264 DRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ EG + P+LI +LP V CG +T G ++ WG N LG
Sbjct: 320 RAEYGRLGLGEGAEEKSVPTLIPRLPTVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGT 379
Query: 323 G 323
G
Sbjct: 380 G 380
Score = 176 (67.0 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 66/259 (25%), Positives = 109/259 (42%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + +++VQ G H+ ++
Sbjct: 26 SHRSHGTEPGVVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDIVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KV+ + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVDLQEKVI--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLSVPVVKVAS-GNDHLVMLTVDGDLY 194
Query: 261 IFGDRAVDKM-----LFQE--GNHARRPSLISKLPYS-----------EEVVCGGYHTCV 302
G ++ LF G L+ K ++ CG Y T
Sbjct: 195 TLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFA 254
Query: 303 LTSGGELYTWGSNENGCLG 321
++S G +Y +G + LG
Sbjct: 255 ISSEGHVYGFGLSNYHQLG 273
Score = 175 (66.7 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 52/179 (29%), Positives = 83/179 (46%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG ++ P ++ K K V S G HH
Sbjct: 247 CGAYFTFAISSEGHVYGFGLSNYHQLG-TQGTESCFVPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A + +PT + L + A G AVT
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEK-SVPTLIPRLPTV--SSVACGASVGYAVTK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQ+ + T K+LE V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG-------KQLENRVVLTVSSGGQHTVLL 414
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 45/162 (27%), Positives = 73/162 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAH-TLFLTETGCVYATGLND 99
+G +Y +LG ES + P ++F K+S K+ GG H T+ + G Y+ G +
Sbjct: 264 FGLSNYHQLGTQGTESCFVPQNLTSF-KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAE 322
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G+LG+ E P I L V ++ G A+T DG ++ WG +N QLG G+
Sbjct: 323 YGRLGLGEGAEEKSVPTLIPRLPT-VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQ 381
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
P+ + L + G + +V + K SW
Sbjct: 382 DEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD-KEQSW 422
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 268 (99.4 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 91/295 (30%), Positives = 149/295 (50%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG S+ R +P + + ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGESVLERKKPALVPLLQD-VVQAEA-GGMHTVCLSQSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQLDTQVV--KVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPR--LIKE--LEG-VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
R E PR L+K G V+ + A G + I G VY FG ++
Sbjct: 215 GGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGT 274
Query: 273 QEGNHARRPSLISKLPYSEEV---VCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ S + GG +HT + S G+ Y+ G E G LG+G
Sbjct: 275 PGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG 329
Score = 211 (79.3 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 82/300 (27%), Positives = 131/300 (43%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LTE G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L +VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDTQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + + +P V S G + + A G + A++ G V +G
Sbjct: 208 PELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLS 267
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+LG S F+ K G + G H+ C+D G+ Y G
Sbjct: 268 NYHQLGTPGTGSC--FIPQNLTSFKNSTKSWVGF-----SGGQHHTVCMDSEGKAYSLGR 320
Query: 265 RAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ EG + P+LIS+LP V CG ++ G ++ WG N LG G
Sbjct: 321 AEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTG 380
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 54/179 (30%), Positives = 84/179 (46%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + G P ++ K K V S G HH
Sbjct: 247 CGAYFTFAISREGHVYGFGLSNYHQLG-TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A + IPT + L + A G AV+
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEK-SIPTLISRLPVV--SSVACGASVGYAVSK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQE + T K+LE +V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQEDDAWSPVEMTG-------KQLENREVLTVSSGGQHTVLL 414
Score = 169 (64.5 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 62/253 (24%), Positives = 112/253 (44%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ E++ +P + L ++VVQ G H+ ++
Sbjct: 26 SHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP-LLQDVVQAEAGGMHTVCLSQ 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGA--GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK--VKIAAAGFLHS-ACIDE 255
WG+ +G +G E + + +++K G V + G L++ C ++
Sbjct: 143 WGSFRDNNGVIGL-LEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGDLYTLGCGEQ 201
Query: 256 N--GRV-YIFGDRA----VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
GRV +F +R ++++L + ++ + ++ CG Y T ++ G
Sbjct: 202 GQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRF-QDAFCGAYFTFAISREGH 260
Query: 309 LYTWGSNENGCLG 321
+Y +G + LG
Sbjct: 261 VYGFGLSNYHQLG 273
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 277 (102.6 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 72/219 (32%), Positives = 114/219 (52%)
Query: 47 DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS 106
D G++ + + RP+ + E + +ACG H++ L+ G ++ G N GQLG+
Sbjct: 93 DDGKVLIMDQSTVCRPL--KSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLR 150
Query: 107 ENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ + P + L + V QIS G +HS +++ G ++ WG NS GQLGLG + +
Sbjct: 151 KEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFV 210
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P T V+ L G T + G E + ++ GG V ++G+GG G+LGH L+
Sbjct: 211 P--TIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNS-------LKD-- 259
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFG 263
E+ PRLI EL G KV G H+ +E+ + +Y FG
Sbjct: 260 EHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFG 298
Score = 260 (96.6 bits), Expect = 4.0e-21, P = 4.0e-21
Identities = 74/239 (30%), Positives = 118/239 (49%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
E G V L D G++ I + PL+ S ++V+QI+ G HS A++ DG+L++W
Sbjct: 85 EAGAVL---LADDGKVLIMDQ-STVCRPLK-SLENRQVIQIACGDQHSMALSNDGQLFVW 139
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+N++GQLGL K+ A P ++ L I Q + G S ++ G V WG+ +G
Sbjct: 140 GENTHGQLGLRKEQAGT-QSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAG 198
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G + + P ++K L G K + G H+A + + G V+ FG
Sbjct: 199 QLGLGD---------TKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGF 249
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL-YTWGSNENGCLGIG 323
++ P LI++L S+ +V CG +HT V +L Y++G G LG G
Sbjct: 250 GQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNG 308
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 48/155 (30%), Positives = 78/155 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LGLG + R+ P + + +++CGG HT L++ G V+ G FGQ
Sbjct: 192 WGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQ 251
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG ++ P I+ L +V Q++ G HH+ +L Y +G GQLG G++
Sbjct: 252 LG-HNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQ 310
Query: 161 AAKVIPIPTKV--ECLSGIFTKQAAL-GFEQSVAV 192
+ +P+P + EC FT + + G S A+
Sbjct: 311 VKQSVPLPVLLPTECTE--FTMEKLITGEHHSFAL 343
Score = 166 (63.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG +G+LGL ++ + P + + + ++ GG H+ L+ +G V+ G N
Sbjct: 138 VWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSA 197
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG+ + + + S K+ V IS G H++ ++ G ++ +G GQLG
Sbjct: 198 GQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLG--HN 255
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQE 214
+ K P + L G Q G ++ K++ S+G G G+LG+G++
Sbjct: 256 SLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQ 310
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 270 (100.1 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 87/286 (30%), Positives = 133/286 (46%)
Query: 46 GDYGRLGLGSLE-SR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
GD G L+ SR +RP + A + K +A G T+FL+ G Y G N GQ
Sbjct: 188 GDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQ 247
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P + LK VVQI+ G + A+T DG +Y +G SN LG G++
Sbjct: 248 LGHGDTLDRPV-PKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQ 306
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P + GI + + G E +VA+ G+V +WG G G LGHG E+
Sbjct: 307 QDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDEND---- 362
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE---GNH 277
+ TP+++ L A + + E G +Y FG + F + +
Sbjct: 363 -----KITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDK 417
Query: 278 ARRPSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
RP ++ L P+ +V G YHT V+T G ++ +G NE LG
Sbjct: 418 VLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLG 463
Score = 185 (70.2 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 70/256 (27%), Positives = 111/256 (43%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYH 133
+A G HTL + + VY+ G++ G L G + P+ +V Q+S +
Sbjct: 116 IATGKYHTLLINNSK-VYSCGVSLSGVLAHGSETTQCVAFTPIEFP-FPAQVAQVSATQN 173
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS+ + G++ G NS+ G ++ I P VE L G KQ A G +V ++
Sbjct: 174 HSAFVLQSGQVLTCGDNSSHCCG-HLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLS 232
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSA 251
G + G+ G+LGHG + P++++ L+ G V+IAA G +
Sbjct: 233 REGHAYTCGSNTHGQLGHGD---------TLDRPVPKVVEFLKTIGPVVQIAA-GPSYVL 282
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP----YSEEVVCGGYHTCVLTSGG 307
+ ++G VY FG + + E +P +I + V G H L S G
Sbjct: 283 AVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNG 342
Query: 308 ELYTWGSNENGCLGIG 323
+YTWG G LG G
Sbjct: 343 RVYTWGKGYCGALGHG 358
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 50/187 (26%), Positives = 78/187 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDF 100
+G+G LG G + +P V AF++ + L + G H + L G VY G
Sbjct: 293 FGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYC 352
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G LG + + P + L + VQ+ + + G LY +G G LG
Sbjct: 353 GALGHGDE-NDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPD 411
Query: 160 KAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ KV+ P +ECL Q + G ++ VT G++ +G +LGH S+
Sbjct: 412 RGVSDKVLR-PRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGH---DSL 467
Query: 218 LGFLRST 224
G L T
Sbjct: 468 RGCLEPT 474
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 276 (102.2 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 82/288 (28%), Positives = 137/288 (47%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG G S +P + S++ ++CG T+ +T+ G +Y+ G + +G L
Sbjct: 381 GSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCL 440
Query: 104 GISENIGYS-LEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G++++ G LEPL + E V Q+S G H A+T +Y WG G+LGL +
Sbjct: 441 GVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSED 500
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P KVE G+ G + S +T GKVL+ G +LG Q ++ +
Sbjct: 501 D--VYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINH 558
Query: 222 RSTSE--YTPRLI--KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+ E YT L K+L K++ + G H+A IDE GR+ FG ++ +
Sbjct: 559 EAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRK 618
Query: 278 ARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
+L+ ++V+ CG T T+ ++ WG+ NG L +
Sbjct: 619 HLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAM 666
Score = 186 (70.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 59/180 (32%), Positives = 84/180 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S + + P + + CG + LT TG V A GLN+ +
Sbjct: 486 WGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNK 545
Query: 103 LGISE-NIG------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ G + P S L K+ + IS G H++AI G L +G
Sbjct: 546 LGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGS 605
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E + A T + +WG GG+GRL
Sbjct: 606 NKCGQLGVGDYR-KHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRL 664
Score = 183 (69.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 75/298 (25%), Positives = 126/298 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G L + WR A + H +T ++ G G G
Sbjct: 333 VWGGGKTTPQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYT-WVNMQG-----GSKLHG 386
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + Y +P + L+ K V ++S G + IT +G+LY +G + G LG+ +
Sbjct: 387 QLGHGDRASYR-QPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQS 445
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P V+ Q + G +A+T V SWG G GRLG E +
Sbjct: 446 AGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDV--- 502
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAG----FLHS------AC-IDENGRVYI--FGDRAV 267
Y+P+ ++ G+ + G FL + AC ++E+ ++ + + +
Sbjct: 503 ------YSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGII 556
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ FQE + +L +L + + + G HT + G L T+GSN+ G LG+G
Sbjct: 557 NHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVG 614
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 276 (102.2 bits), Expect = 7.7e-23, P = 7.7e-23
Identities = 79/259 (30%), Positives = 131/259 (50%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQ 127
+K++++ + CG E G V L+D G++ I + S E + GL+ ++V+Q
Sbjct: 77 KKNTIRLIVCG--------EYGAVL---LDDGGKVLIMDK---STECSPLKGLENRQVIQ 122
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
I+ G HS A+T DG+L++WG+N+ GQLGL K+ A P ++ L GI Q + G
Sbjct: 123 IACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGT-QSPRHLQSLCGIPVAQISAGGN 181
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S ++ G V WG +G+LG G +T + P ++ L+ K+ + G
Sbjct: 182 HSFVLSLSGVVFGWGGNSAGQLGLGD---------TTDRFVPTVVNSLKRKKIVSISCGG 232
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTS 305
H+A + + G V+ FG ++ P L+++L S+ +V CG HT V T+
Sbjct: 233 EHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTA 292
Query: 306 GGEL-YTWGSNENGCLGIG 323
+L Y++G G LG G
Sbjct: 293 SPKLIYSFGCGMQGQLGNG 311
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 41/128 (32%), Positives = 68/128 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG R+ P V ++ ++ + +++CGG HT L + G V+ G FGQ
Sbjct: 195 WGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQ 254
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG + P ++ L +V Q++ G +H+ T +L Y +G GQLG G++
Sbjct: 255 LG-HNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQ 313
Query: 161 AAKVIPIP 168
+ +P+P
Sbjct: 314 VKQSVPLP 321
Score = 177 (67.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 53/180 (29%), Positives = 87/180 (48%)
Query: 42 LWGNGDYGRLGL-----GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
+WG G+LGL G+ R +C + ++ GG H+ L+ +G V+ G
Sbjct: 141 VWGENALGQLGLRKEQAGTQSPRHLQSLCGI----PVAQISAGGNHSFVLSLSGVVFGWG 196
Query: 97 LNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
N GQLG+ + + P ++ LK K++V IS G H++A+ G ++ +G GQL
Sbjct: 197 GNSAGQLGLGDTTDRFV-PTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQL 255
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQE 214
G + K P V L G Q G ++ T K++ S+G G G+LG+G++
Sbjct: 256 G--HNSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQ 313
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 280 (103.6 bits), Expect = 7.9e-23, P = 7.9e-23
Identities = 85/291 (29%), Positives = 132/291 (45%)
Query: 43 WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +LG +S+ P F + +++ G ++ LTE G VY G
Sbjct: 718 WGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTENGDVYLWGRGA 777
Query: 100 FGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LGI + I L P ++ L +VV +S G+ H +A+ +GEL WG NGQ
Sbjct: 778 VKTPAVPILGIPQ-IEDQLLPFKLESLS-DVVSVSIGFCHGAAVRANGELLTWGVGENGQ 835
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G ++ P ++ L+ + Q G + ++ +T GKV SWGA G+LG G
Sbjct: 836 LGHGDTNNQIEP--KIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDV 893
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
T +P + LE V A+G H A + + V +FG+ A
Sbjct: 894 ---------TQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNGAA----MGA 940
Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P+L+ L Y + + CG Y T +T G++YTWG+ + LG G
Sbjct: 941 ASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE--LGHG 989
Score = 248 (92.4 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 58/175 (33%), Positives = 96/175 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G ++ P + + + + CG HT+ LT+ G VY+ G +++GQ
Sbjct: 828 WGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQ 887
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + +S P+++S L+K V+QI++G H + +T E+ ++G NG +G A
Sbjct: 888 LGLGDVTQHS-SPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFG---NGA-AMG--A 940
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
A V+ +PT V L + + G + A+T G V +WG G LGHG S+
Sbjct: 941 ASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE--LGHGGNST 993
Score = 177 (67.4 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 59/196 (30%), Positives = 88/196 (44%)
Query: 134 HSSAITVDGE--LYMWGKNSNGQLGLGKKAAK--VIPIPTKVECLSGIFTKQAALGFEQS 189
H SAI +D L WG SN +LG K AK P P ++ + + G S
Sbjct: 703 HRSAIHLDTSRGLMTWGSASNCKLGF-KVTAKDQSQPTPERLPNFNIPDICSISSGSYYS 761
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+T G V WG G ILG + + P ++ L V V ++ GF H
Sbjct: 762 SVLTENGDVYLWGRGAVKT----PAVPILGIPQIEDQLLPFKLESLSDV-VSVSI-GFCH 815
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGG 307
A + NG + +G ++ + N+ P +I L + +V CG HT LT G
Sbjct: 816 GAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNG 875
Query: 308 ELYTWGSNENGCLGIG 323
++Y+WG++E G LG+G
Sbjct: 876 KVYSWGASEYGQLGLG 891
Score = 150 (57.9 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG G + P + A S++ ++CGG HT FLT++G ++ G + FGQ
Sbjct: 980 WGTGQ--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQ 1037
Query: 103 LGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAI 138
LG + G +P RI L K + +S G +++ A+
Sbjct: 1038 LG--QMSGDQNKPKRIESLTKTTFISVSCGENYNVAL 1072
Score = 131 (51.2 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 40/150 (26%), Positives = 67/150 (44%)
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G AA V+ +PT V L + + G + A+T G V +WG G LGHG S
Sbjct: 935 GAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE--LGHGGNS 992
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ E +P+LI+ L ++ + G H+A + ++GR++ G + ++ G
Sbjct: 993 T---------ETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSG 1043
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVL 303
+ +P I L + V CG + L
Sbjct: 1044 DQ-NKPKRIESLTKTTFISVSCGENYNVAL 1072
Score = 121 (47.7 bits), Expect = 0.00099, P = 0.00099
Identities = 37/116 (31%), Positives = 56/116 (48%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++GNG +G S+ S P + + + + L CG T +TE G VY G
Sbjct: 931 VFGNG--AAMGAASVVSL--PTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ-- 984
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+LG N P I L+ + + QIS G H++ +T G ++ GK+S GQLG
Sbjct: 985 ELGHGGN-STETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLG 1039
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 276 (102.2 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 70/208 (33%), Positives = 113/208 (54%)
Query: 122 KKEVVQISTGYHHSSAITVD--GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
+K ++QI+ G +HS A++ GEL+ WG+N +GQLG+G+ IP P VE LSG+
Sbjct: 134 EKSIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTS-IPTPQLVEHLSGVPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G S+A++ G + SWG G+LG G + E P LI+ L+ K
Sbjct: 193 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGH---------TNGEDFPSLIEALDNQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V+ A G H+A + ++G V+ FG ++ + RP L+++L + +V CG
Sbjct: 244 VEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGS 303
Query: 298 -YHTCVLTSG-GELYTWGSNENGCLGIG 323
+HT S G+++++GS + G LG G
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKEGQLGNG 331
Score = 259 (96.2 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 77/234 (32%), Positives = 116/234 (49%)
Query: 65 CSAFEKHSLKALACGGAHTLFLT--ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
C EK S+ + CG H+L L+ + G ++A G N GQLG+ P + L
Sbjct: 130 CILQEK-SIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLS 188
Query: 123 K-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+VQIS G HS A+++ G +Y WG+N GQLGLG + P+ +E L +
Sbjct: 189 GVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGE--DFPSLIEALDNQKVEF 246
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV- 240
A G + +T G V ++GAG G+LGH + +E PRL+ EL G +V
Sbjct: 247 LACGGSHTALLTKDGLVFTFGAGKYGQLGHNS---------TQNELRPRLVTELAGNRVT 297
Query: 241 KIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
++A H+ A + + G+V+ FG + L G H + L KLP +EE+
Sbjct: 298 QVACGSRWHTLAYVSDLGKVFSFGS-GKEGQLGNGGTHNQLIPLPMKLPSNEEL 350
Score = 208 (78.3 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 50/163 (30%), Positives = 82/163 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG P + A + ++ LACGG+HT LT+ G V+ G +GQ
Sbjct: 214 WGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYH-HSSAITVD-GELYMWGKNSNGQLGLGK 159
LG + L P ++ L V Q++ G H+ A D G+++ +G GQLG G
Sbjct: 274 LGHNSTQN-ELRPRLVTELAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGG 332
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSW 201
++IP+P K+ + ++ ++ + + GG + +L W
Sbjct: 333 THNQLIPLPMKLPSNEEL-KFESRTSEKELIMIAGGNQSILLW 374
Score = 198 (74.8 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 57/174 (32%), Positives = 90/174 (51%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G L S P + L ++ G AH++ L+ +G +Y+ G ND G
Sbjct: 161 WGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ G P I L + V+ ++ G H++ +T DG ++ +G GQLG
Sbjct: 221 QLGLGHTNGEDF-PSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNST 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE-QSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L+G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 280 QNELRP--RLVTELAGNRVTQVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNG 331
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 268 (99.4 bits), Expect = 9.4e-23, P = 9.4e-23
Identities = 86/305 (28%), Positives = 135/305 (44%)
Query: 42 LWGNGDYGRLGLGSLESRWR------PVV--CSAFEKHSLKALACGGAHTLFLTETGCVY 93
+WG G+ G E R P + C A ++CG HT + G ++
Sbjct: 24 VWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASDGSLF 83
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITV----DG-----E 143
A G N++GQLG +G P ++ L+ E V+ +S G ++AI DG
Sbjct: 84 AWGANEYGQLGDGTEVGRK-HPKKVKQLQSEFVKFVSCGAFCTAAIAEPRENDGTLSTSR 142
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L++WG+N L + + P T + +Q + G VA++ G + +WG
Sbjct: 143 LWVWGQNQGSNLP--RLFSGAFPATTAI--------RQVSCGTAHVVALSEEGLLQAWGY 192
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG G L R + Y L + E VK+ + G H+A + + G VY +G
Sbjct: 193 NEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWG 252
Query: 264 DRAVDKM---LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
++ ++ Q G+ P + L +EV CGG HTC L+ G LY WG + G
Sbjct: 253 LGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWGGGQAG 312
Query: 319 CLGIG 323
LG+G
Sbjct: 313 QLGLG 317
Score = 252 (93.8 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 71/250 (28%), Positives = 124/250 (49%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-------- 123
+++ ++CG AH + L+E G + A G N+ GQLG P I+ K
Sbjct: 167 AIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPEL 226
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQ 181
+++Q+S G +H++A++ GE+Y WG S GQLG + ++ IP +V L G+ K+
Sbjct: 227 VKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKE 286
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKV 240
A G + A++ G + +WG G +G+LG G +S + + SE R + L V
Sbjct: 287 VACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDV 346
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-LPYSEEVVCGGYH 299
++ A G H+ GR+ +G + + ++ ++A PS + + ++ GG H
Sbjct: 347 RLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLAAGGGH 406
Query: 300 TCVLTSGGEL 309
+ VLT L
Sbjct: 407 SAVLTDAFSL 416
Score = 231 (86.4 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 83/299 (27%), Positives = 125/299 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG G+ R P + +K ++CG T + E G +
Sbjct: 85 WGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPR--ENDGTLSTSR 142
Query: 103 LGI-SENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
L + +N G +L P SG + Q+S G H A++ +G L WG N GQLG G
Sbjct: 143 LWVWGQNQGSNL-PRLFSGAFPATTAIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRG 201
Query: 159 K-----KAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+A +VI K E + Q + G + A++ G+V +WG G G+LGH
Sbjct: 202 VTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGH 261
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM- 270
S E PR + L+GV +K A G +H+ + G +Y +G ++
Sbjct: 262 VSLQS------GDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLG 315
Query: 271 -------LFQEGNHAR---RPSLISKLPYSEEVV-CGGYHTCVLTSGGELYTWGSNENG 318
F N + R + +P +V CG HT V G + WG N G
Sbjct: 316 LGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMREGRICGWGYNSYG 374
Score = 171 (65.3 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 73/265 (27%), Positives = 110/265 (41%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISEN-----IGYSLEPLRI---SGLKKEVVQISTGY 132
A ++ + +Y G N GQ G +E I L P +G + IS G
Sbjct: 11 APSVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGR 70
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H++A+ DG L+ WG N GQLG G + + P KV+ L F K + G + A+
Sbjct: 71 EHTAAVASDGSLFAWGANEYGQLGDGTEVGR--KHPKKVKQLQSEFVKFVSCGAFCTAAI 128
Query: 193 TGGGKVLSWGAGGSGRL---GHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIAAAGF 247
+ + G + RL G Q S++ PRL ++ + G
Sbjct: 129 AEPRE--NDGTLSTSRLWVWGQNQGSNL-----------PRLFSGAFPATTAIRQVSCGT 175
Query: 248 LHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRP-SLISK-LPYSEEVV------CG 296
H + E G + +G ++ + EG A R + +K L + E+V CG
Sbjct: 176 AHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCG 235
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
YHT L+ GE+YTWG G LG
Sbjct: 236 EYHTAALSDAGEVYTWGLGSMGQLG 260
Score = 168 (64.2 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 56/201 (27%), Positives = 90/201 (44%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-----CLSGIFTK--QAALGFE 187
S +I +Y+WG N +GQ G ++ K++ IP ++ C +G ++ + G E
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQE-KLLRIPKQLPPELFGCPAGANSRWLDISCGRE 71
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+ AV G + +WGA G+LG G E P+ +K+L+ VK + G
Sbjct: 72 HTAAVASDGSLFAWGANEYGQLGDGTE---------VGRKHPKKVKQLQSEFVKFVSCGA 122
Query: 248 LHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLIS-KLPYS---EEVVCGGYHTCV 302
+A I E G + ++ ++ + + P L S P + +V CG H
Sbjct: 123 FCTAAIAEPREND--GTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVA 180
Query: 303 LTSGGELYTWGSNENGCLGIG 323
L+ G L WG NE G LG G
Sbjct: 181 LSEEGLLQAWGYNEQGQLGRG 201
Score = 155 (59.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 58/208 (27%), Positives = 89/208 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVV---CSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G G+LG SL+S + ++ + S+K +ACGG HT L+ G +YA G
Sbjct: 251 WGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWGGGQ 310
Query: 100 FGQLGISENIGYS----------LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
GQLG+ G+ L + + + +V ++ G+ H+ +G + WG
Sbjct: 311 AGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMREGRICGWGY 370
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG--KVLSWGAGGSG 207
NS GQ K + P P V+ G K AA G +V ++ + S
Sbjct: 371 NSYGQAANEKSSYAWYPSP--VDWCVGQVRKLAAGGGHSAVLTDAFSLKELCEFQLADSV 428
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKEL 235
L + E + F R SE RL + L
Sbjct: 429 NLSNASEIQDVAF-RMGSEALARLCERL 455
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 89/295 (30%), Positives = 148/295 (50%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 58 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 115
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 116 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 174
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E
Sbjct: 175 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANR 231
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
R E P+ + + G V+ + A G + I G VY FG ++
Sbjct: 232 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGT 291
Query: 273 QEGNHARRPSLISKLPYSEEV---VCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ S + GG +HT + S G+ Y+ G E G LG+G
Sbjct: 292 PGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG 346
Score = 186 (70.5 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 66/259 (25%), Positives = 116/259 (44%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A +C +H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H
Sbjct: 37 ARSCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMH 95
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ ++ G++Y +G N G LG +P KVE + Q + G + A+T
Sbjct: 96 TVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTD 153
Query: 195 GGKVLSWGA--GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK--VKIAAAGFLHS 250
G+V WG+ +G +G E + + ++K G V + A G L++
Sbjct: 154 DGRVFLWGSFRDNNGVIGL-LEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYT 212
Query: 251 -ACIDEN--GRV-YIFGDRA----VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
C ++ GRV +F +R ++++L + + + + ++ CG Y T
Sbjct: 213 LGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRF-QDAFCGAYFTFA 271
Query: 303 LTSGGELYTWGSNENGCLG 321
++ G +Y +G + LG
Sbjct: 272 ISHEGHVYGFGLSNYHQLG 290
Score = 176 (67.0 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 76/274 (27%), Positives = 121/274 (44%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LT+ G V+ G +
Sbjct: 108 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTDDGRVFLWGSFRD 165
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 166 NNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRV 224
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + + +P V S G + + A G + A++ G V +G
Sbjct: 225 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLS 284
Query: 205 GSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LG G ES F+ K G + G H+ C+D G+ Y G
Sbjct: 285 NYHQLGTPGTESC---FIPQNLTSFKNSTKSWVGF-----SGGQHHTVCMDSEGKAYSLG 336
Query: 264 DRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCG 296
++ EG + P+LIS+LP V CG
Sbjct: 337 RAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACG 370
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 274 (101.5 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 81/261 (31%), Positives = 126/261 (48%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
G + L LT+TG VY++GL +G+ G + L P +I L K + I+ G HHS A
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDV-LIPTQILELSNKRIKSIACGTHHSLA 260
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL----GFEQSVAVT 193
+ G++Y WG ++G+LGLG + ++P PT + ++ + + A G + S+ +
Sbjct: 261 MDDLGQVYSWGNGASGRLGLGNDFS-IVPTPTLISVINRFGSNEIATAIAAGCDNSMILG 319
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G V S+G+ +LG+ + LGF + TP+ I + +K IA A + HS +
Sbjct: 320 SNGDVYSFGSNLHYKLGYKECDGALGF-----QSTPKKIPSILQMK-SIACASW-HSVFL 372
Query: 254 DENGRVYIFGD-------RAVDKM--LFQEGNHARRPSLISKLPYSE---EVVCGGYHTC 301
D GRVY G RA+ + E LP E ++ CG T
Sbjct: 373 DLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEEVIKQIACGTNFTT 432
Query: 302 VLTSGGELYTWGSNENGCLGI 322
VL+ G LY+WG N LG+
Sbjct: 433 VLSESGSLYSWGVNTKSQLGL 453
Score = 210 (79.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 67/204 (32%), Positives = 99/204 (48%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+Q G +++ +T G +Y G S G+ G KK + + IPT++ LS K A G
Sbjct: 197 IQTEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKK--RDVLIPTQILELSNKRIKSIACG 254
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV---KVKI 242
S+A+ G+V SWG G SGRLG G + SI+ TP LI + ++
Sbjct: 255 THHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVP--------TPTLISVINRFGSNEIAT 306
Query: 243 A-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSEEVVCGG 297
A AAG +S + NG VY FG K+ ++E + A P I + + + C
Sbjct: 307 AIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSIACAS 366
Query: 298 YHTCVLTSGGELYTWGSNENGCLG 321
+H+ L G +YT GS+ NG LG
Sbjct: 367 WHSVFLDLKGRVYTCGSSTNGRLG 390
Score = 185 (70.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 74/301 (24%), Positives = 132/301 (43%)
Query: 41 ALWGNG--DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A++ +G YG+ G P +K++ACG H+L + + G VY+ G
Sbjct: 214 AVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAMDDLGQVYSWGNG 273
Query: 99 DFGQLGISENIGYSLEPLRISGLKK----EVVQ-ISTGYHHSSAITVDGELYMWGKNSNG 153
G+LG+ + P IS + + E+ I+ G +S + +G++Y +G N +
Sbjct: 274 ASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHY 333
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+LG K+ + + + + I K A SV + G+V + G+ +GRLG
Sbjct: 334 KLGY-KECDGALGFQSTPKKIPSILQMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRA 392
Query: 213 QESSILGF----LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
SS F + T+ T + + E +K +IA G + + E+G +Y +G
Sbjct: 393 I-SSYSSFYPERVSITNSKTNGTLPQEEVIK-QIAC-GTNFTTVLSESGSLYSWGVNTKS 449
Query: 269 KM----LFQEGNHARRPSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ L + +P L++ L PY+ G H L+ GE++ +G N G
Sbjct: 450 QLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCYGDNSTLQCGF 509
Query: 323 G 323
G
Sbjct: 510 G 510
Score = 178 (67.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 65/249 (26%), Positives = 108/249 (43%)
Query: 43 WGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLK----ALACGGAHTLFLTETGCVYATGL 97
WGNG GRLGLG+ S P + S + A+A G +++ L G VY+ G
Sbjct: 270 WGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGS 329
Query: 98 NDFGQLGISE---NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
N +LG E +G+ P +I + ++ I+ HS + + G +Y G ++NG+
Sbjct: 330 NLHYKLGYKECDGALGFQSTPKKIPSIL-QMKSIACASWHSVFLDLKGRVYTCGSSTNGR 388
Query: 155 LGLGKKAAKVIPIPTKVECLS----GIFT-----KQAALGFEQSVAVTGGGKVLSWGAGG 205
LG + P +V + G KQ A G + ++ G + SWG
Sbjct: 389 LGRAISSYSSF-YPERVSITNSKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNT 447
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
+LG +++G S+ P+L+ L + A G H + + G V+ +GD
Sbjct: 448 KSQLGL---INLVGISEYYSQ--PKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCYGDN 502
Query: 266 AVDKMLFQE 274
+ + F E
Sbjct: 503 STLQCGFGE 511
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 43/145 (29%), Positives = 70/145 (48%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG---YSLEPLRISGLKKEV 125
++ +K +ACG T L+E+G +Y+ G+N QLG+ +G Y +P ++ L
Sbjct: 417 QEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYT 476
Query: 126 VQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ + G H A++ GE++ +G NS Q G G+ I + TKV+ I T +
Sbjct: 477 IHSFAVGDQHVVALSDQGEVFCYGDNSTLQCGFGEVLNFEINL-TKVK----IETTSS-- 529
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRL 209
+ GGG V AGGS +
Sbjct: 530 ----DAPIIGGGGVFKVSAGGSNTM 550
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 265 (98.3 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 91/295 (30%), Positives = 150/295 (50%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVPIPED-IVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ LS K A+ G + V +T G++ + G+G G+LG E
Sbjct: 158 PMKKSM-VPVQVQ-LSMPVVKVAS-GNDHLVMLTADGELYTLGSGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
R E P+ + + G V+ + A G + I G VY FG ++
Sbjct: 215 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGT 274
Query: 273 QEGNHARRPSLISKLPYSEEV---VCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ S + GG +HT + S G Y+ G E G LG+G
Sbjct: 275 PGTESCFVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLG 329
Score = 226 (84.6 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 87/302 (28%), Positives = 134/302 (44%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LTE G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +T DGELY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LSMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + + +P V S G + + A G + A++ G V +G
Sbjct: 208 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLS 267
Query: 205 GSGRLGH-GQESSILGF-LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+LG G ES + L S T ++ + G H+ C+D GR Y
Sbjct: 268 NYHQLGTPGTESCFVPQNLTSFKNSTKSWVR---------FSGGQHHTVCMDSEGRAYSL 318
Query: 263 GDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
G ++ EG + P+LIS+LP V CG +T G ++ WG N LG
Sbjct: 319 GRAEYGRLGLGEGAEEKSVPTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLG 378
Query: 322 IG 323
G
Sbjct: 379 TG 380
Score = 180 (68.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 53/179 (29%), Positives = 82/179 (45%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + P ++ K K V+ S G HH
Sbjct: 247 CGAYFTFAISSEGHVYGFGLSNYHQLG-TPGTESCFVPQNLTSFKNSTKSWVRFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G Y G+ G+LGLG+ A + +PT + L + A G AVT
Sbjct: 306 TVCMDSEGRAYSLGRAEYGRLGLGEGAEEK-SVPTLISRLPAV--SSVACGASVGYAVTK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQE + T K+LE V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQEEDAWSPVEMTG-------KQLENRMVLSVSSGGQHTVLL 414
Score = 178 (67.7 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 66/259 (25%), Positives = 108/259 (41%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P + + +++VQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVP-IPEDIVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLSMPVVKVAS-GNDHLVMLTADGELY 194
Query: 261 IFGDRAVDKM-----LFQE--GNHARRPSLISKLPYS-----------EEVVCGGYHTCV 302
G ++ LF G L+ K ++ CG Y T
Sbjct: 195 TLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFA 254
Query: 303 LTSGGELYTWGSNENGCLG 321
++S G +Y +G + LG
Sbjct: 255 ISSEGHVYGFGLSNYHQLG 273
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 40/128 (31%), Positives = 64/128 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAH-TLFLTETGCVYATGLND 99
+G +Y +LG ES + P ++F K+S K+ GG H T+ + G Y+ G +
Sbjct: 264 FGLSNYHQLGTPGTESCFVPQNLTSF-KNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAE 322
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G+LG+ E P IS L V ++ G A+T DG ++ WG +N QLG G+
Sbjct: 323 YGRLGLGEGAEEKSVPTLISRLPA-VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQ 381
Query: 160 KAAKVIPI 167
+ P+
Sbjct: 382 EEDAWSPV 389
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 267 (99.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 88/263 (33%), Positives = 131/263 (49%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK---EVVQIST 130
++CG AH+L LT+ V++ G N +GQ G + EN YS E R+ ++ +VVQ++
Sbjct: 179 VSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYS-ESHRVHRMQDFDGQVVQVAC 237
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQS 189
G HS +T GE+Y G ++GQ GLG + PTK+ L+G+ Q A +
Sbjct: 238 GQDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSSPTKLGGDLAGVNVIQVATYGDCC 295
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFL 248
+AV+ G + WG S L Q +S+ ST PR + GV KV+ AA G
Sbjct: 296 LAVSADGGLFGWG--NSEYL---QLASVTD---STQVNVPRCL-HFSGVGKVRQAACGGT 346
Query: 249 HSACIDENGRVYIFGDRAVDK--MLFQEG-NHARRPSLISKLPYSEEVV-----CGGYHT 300
A ++ G V+++G + K L + P+L ++ E+ CG H
Sbjct: 347 GCAVLNGEGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHF 406
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
LT+ GEL+ WG N GCLGIG
Sbjct: 407 AALTNKGELFVWGKNIRGCLGIG 429
Score = 153 (58.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 78/286 (27%), Positives = 120/286 (41%)
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFGQLGI-----SENIG 110
R +PV + + ACG TL ++T V + GLN QLG + G
Sbjct: 95 RIQPVPYRLELDQKISSAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRG 154
Query: 111 YS--LEPLRIS-GLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
Y LEP +S L + V+Q+S G HS +T ++ G NS GQ G +
Sbjct: 155 YEYVLEPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENE 214
Query: 164 VIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +V + + Q A G + S+ +T G+V S G G G+ G LG
Sbjct: 215 IYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTG-------LGHY 267
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKML-FQEGNHAR 279
TS T +L +L GV V ++A G A + +G ++ +G+ ++ +
Sbjct: 268 NITSSPT-KLGGDLAGVNVIQVATYGDCCLA-VSADGGLFGWGNSEYLQLASVTDSTQVN 325
Query: 280 RPSLI--SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + S + + CGG VL G ++ WG G LG G
Sbjct: 326 VPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWGY---GILGKG 368
Score = 133 (51.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 42/134 (31%), Positives = 62/134 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F ++ ACGG L G V+ G +G
Sbjct: 307 WGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWG---YG 363
Query: 102 QLGISENIGYSLEPLRIS----GLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSN 152
LG N+ S P I GL + +V +I G H +A+T GEL++WGKN
Sbjct: 364 ILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIR 423
Query: 153 GQLGLGKKAAKVIP 166
G LG+G+ + P
Sbjct: 424 GCLGIGRLEDQYFP 437
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 266 (98.7 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 88/263 (33%), Positives = 131/263 (49%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK---EVVQIST 130
++CG AH+L LT+ V++ G N +GQ G + EN YS E +++ ++ +VVQ+
Sbjct: 180 VSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYS-ESHKVNRMQDFDGQVVQVVC 238
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQS 189
G HS +T GE+Y G ++GQ GLG + +PTK+ L+G+ Q A +
Sbjct: 239 GQDHSLFLTDKGEVYSCGWGADGQTGLGHY--DITSVPTKLGGDLAGVNVVQVATYGDCC 296
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFL 248
+AV+ G + WG S L Q +S+ ST PR + GV KVK AA G
Sbjct: 297 LAVSAEGGLFGWG--NSEYL---QLASVTD---STQVNVPRCLP-FSGVGKVKQAACGGT 347
Query: 249 HSACIDENGRVYIFGDRAVDK--MLFQEG-NHARRPSLISKLPYS-----EEVVCGGYHT 300
A ++ G V+++G + K L + P+L ++ + CG H
Sbjct: 348 GCAVLNGEGHVFVWGYGILGKGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHF 407
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
LTS GEL+ WG N GCLGIG
Sbjct: 408 AALTSKGELFVWGKNIRGCLGIG 430
Score = 145 (56.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 77/288 (26%), Positives = 119/288 (41%)
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFGQLGI-----SENIG 110
R +PV + + ACG TL ++T V + GLN QLG + G
Sbjct: 96 RIQPVPYRLELDQKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSHKDKTRG 155
Query: 111 YS--LEPLRIS-GLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
Y LEP + L + V+Q+S G HS +T ++ G N+ GQ G +
Sbjct: 156 YEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENE 215
Query: 164 VIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ KV + + Q G + S+ +T G+V S G G G+ G LG
Sbjct: 216 IYSESHKVNRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTG-------LGHY 268
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TS T +L +L GV V ++A G C+ + +FG + + + +
Sbjct: 269 DITSVPT-KLGGDLAGVNVVQVATYG---DCCLAVSAEGGLFGWGNSEYLQLASVTDSTQ 324
Query: 281 PSLISKLPYS-----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ LP+S ++ CGG VL G ++ WG G LG G
Sbjct: 325 VNVPRCLPFSGVGKVKQAACGGTGCAVLNGEGHVFVWGY---GILGKG 369
Score = 129 (50.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 39/131 (29%), Positives = 58/131 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K ACGG L G V+ G G
Sbjct: 308 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQAACGGTGCAVLNGEGHVFVWGYGILG 367
Query: 102 Q-LGISENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ + E + P + GL + V I G H +A+T GEL++WGKN G L
Sbjct: 368 KGPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCL 427
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 428 GIGRLEDQYFP 438
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 263 (97.6 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 89/295 (30%), Positives = 148/295 (50%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
R E P+ + + G V+ + A G + I G VY FG ++
Sbjct: 215 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGT 274
Query: 273 QEGNHARRPSLISKLPYSEEV---VCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ S + GG +HT + S G+ Y+ G E G LG+G
Sbjct: 275 PGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG 329
Score = 212 (79.7 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 84/301 (27%), Positives = 132/301 (43%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LT+ G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLS-G----IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
G++ + + +P V S G + + A G + A++ G V +G
Sbjct: 208 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLS 267
Query: 205 GSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LG G ES F+ K G + G H+ C+D G+ Y G
Sbjct: 268 NYHQLGTPGTESC---FIPQNLTSFKNSTKSWVGF-----SGGQHHTVCMDSEGKAYSLG 319
Query: 264 DRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ EG + P+LIS+LP V CG +T G ++ WG N LG
Sbjct: 320 RAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGT 379
Query: 323 G 323
G
Sbjct: 380 G 380
Score = 179 (68.1 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 64/253 (25%), Positives = 113/253 (44%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 142
Query: 201 WGA--GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK--VKIAAAGFLHS-ACIDE 255
WG+ +G +G E + + ++K G V + A G L++ C ++
Sbjct: 143 WGSFRDNNGVIGL-LEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQ 201
Query: 256 N--GRV-YIFGDRA----VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
GRV +F +R ++++L + + + + ++ CG Y T ++ G
Sbjct: 202 GQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRF-QDAFCGAYFTFAISHEGH 260
Query: 309 LYTWGSNENGCLG 321
+Y +G + LG
Sbjct: 261 VYGFGLSNYHQLG 273
Score = 173 (66.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 46/140 (32%), Positives = 69/140 (49%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + P ++ K K V S G HH
Sbjct: 247 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFI-PQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A + IPT + L + A G AVT
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEK-SIPTLISRLPAV--SSVACGASVGYAVTK 362
Query: 195 GGKVLSWGAGGSGRLGHGQE 214
G+V +WG G + +LG GQ+
Sbjct: 363 DGRVFAWGMGTNYQLGTGQD 382
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/120 (32%), Positives = 61/120 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAH-TLFLTETGCVYATGLND 99
+G +Y +LG ES + P ++F K+S K+ GG H T+ + G Y+ G +
Sbjct: 264 FGLSNYHQLGTPGTESCFIPQNLTSF-KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAE 322
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G+LG+ E P IS L V ++ G A+T DG ++ WG +N QLG G+
Sbjct: 323 YGRLGLGEGAEEKSIPTLISRLPA-VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQ 381
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 271 (100.5 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 81/288 (28%), Positives = 139/288 (48%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 463 VAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 522
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P KV+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 523 P--QKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 581 EIPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQL--GVGNYKK 636
Query: 280 RP--SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
R +L+ ++V+ CG T T ++ WG+ NG L +
Sbjct: 637 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 684
Score = 202 (76.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 61/180 (33%), Positives = 89/180 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 103 LGISENIG-------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 564 LGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 624 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 165 (63.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 69/273 (25%), Positives = 115/273 (42%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 370 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 428
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K A + P ++ +Q + G
Sbjct: 429 RQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCG 488
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQKVDVPKALIIVAVQC 539
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQ--EG--NHARR---P-----SLISKLPYSE- 291
G + + ++G+V G +K+ L Q G NH P +L +L + +
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKI 599
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G HT + G L T+G N+ G LG+G
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 632
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 46/161 (28%), Positives = 73/161 (45%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 414
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-----RAVDKMLFQEGNHARRP 281
P+ +++L+G ++ + G + C+ + G++Y FG VDK+ E +
Sbjct: 415 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ P E+V CG H VLT E+Y+WG E G LG+
Sbjct: 475 NFFLNNPV-EQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 514
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 270 (100.1 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 81/288 (28%), Positives = 139/288 (48%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 463 VAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 522
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P KV+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 523 P--QKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 581 EVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQL--GVGNYKK 636
Query: 280 RP--SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
R +L+ ++V+ CG T T ++ WG+ NG L +
Sbjct: 637 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 684
Score = 203 (76.5 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 61/180 (33%), Positives = 89/180 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 103 LGISENIG-------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 564 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 624 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 165 (63.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 69/273 (25%), Positives = 115/273 (42%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 370 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 428
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K A + P ++ +Q + G
Sbjct: 429 RQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCG 488
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQKVDVPKALIIVAVQC 539
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQ--EG--NHARR---P-----SLISKLPYSE- 291
G + + ++G+V G +K+ L Q G NH P +L +L + +
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 599
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G HT + G L T+G N+ G LG+G
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 632
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 46/161 (28%), Positives = 73/161 (45%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 414
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-----RAVDKMLFQEGNHARRP 281
P+ +++L+G ++ + G + C+ + G++Y FG VDK+ E +
Sbjct: 415 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ P E+V CG H VLT E+Y+WG E G LG+
Sbjct: 475 NFFLSNPV-EQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 514
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 259 (96.2 bits), Expect = 4.0e-22, P = 4.0e-22
Identities = 82/293 (27%), Positives = 132/293 (45%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTE---TGCVYATG 96
A+WGN + G+LG G+ S P + F +S A G +HTL + V A G
Sbjct: 53 AVWGNNESGQLGDGTTTSAATPKRLRLGFATYS-SGFATGASHTLAIARFDNVSGVRAWG 111
Query: 97 LNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
N GQ+G + S P++I G V Q++ G HS A+ G ++ WG NS GQL
Sbjct: 112 SNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMALA-GGTVWAWGSNSAGQL 170
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAAL-GFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L ++ P +VE A + G S+A T + +WG SG+LG+G
Sbjct: 171 ALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGT- 228
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ S + P+ ++ + ++ +AG H+ +D G ++ +G A ++
Sbjct: 229 --------TLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGT 280
Query: 275 GNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ LP +V G H+ + S +YTWG N G L +G
Sbjct: 281 TTNQSTPVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVG 332
Score = 243 (90.6 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 84/294 (28%), Positives = 136/294 (46%)
Query: 43 WGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ G++G ++ + PV F +++ +A GG H++ L G V+A G N
Sbjct: 110 WGSNSAGQIGRDPATVPTSSTPVKIGGFGG-AVQQVAAGGLHSMALAG-GTVWAWGSNSA 167
Query: 101 GQLGISE-NIGYSLEPLRISGLKKEVVQ--ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQL ++ + P ++ K + I G HS A T E Y WG N++GQLG
Sbjct: 168 GQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYT-STEAYAWGNNASGQLGN 226
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + +P KV+ S I ++ + G ++A+ G + +WG+ G+LG+G
Sbjct: 227 GTTLSN--HMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGT---- 280
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+T++ TP + GV I AG HS + N VY +G + +
Sbjct: 281 -----TTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTG 335
Query: 277 HARRPSLI---SKLPYS--EEVVC-GGYHTCVLTSG-GELYTWGSNENGCLGIG 323
P+ + S +P++ E VV G + T V +G G ++ WG N G LG G
Sbjct: 336 DQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDG 389
Score = 199 (75.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 58/185 (31%), Positives = 89/185 (48%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WGN G+LG G+ S P +++ ++ GG+H L L TG ++A G N
Sbjct: 213 AYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNA 272
Query: 100 FGQLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+GQLG S P++++ L V + + G HS A+ + +Y WG N+ G L
Sbjct: 273 YGQLGNGTTTNQST-PVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLS 330
Query: 157 LGKKAAKVIPIPTKVECLSGI-FT---KQAALG-FEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G ++ P +V S + FT + LG F V G G + +WG G G+LG
Sbjct: 331 VGTTGDQLSP--AQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGD 388
Query: 212 GQESS 216
G S+
Sbjct: 389 GTTSN 393
Score = 170 (64.9 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 58/203 (28%), Positives = 93/203 (45%)
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S Y HS+ L +WG N +GQLG G + P ++ ++ A G
Sbjct: 37 SPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATP--KRLRLGFATYSSGFATGASH 94
Query: 189 SVAVT---GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
++A+ V +WG+ +G++G +++ TS TP I G ++AA
Sbjct: 95 TLAIARFDNVSGVRAWGSNSAGQIGR-DPATV-----PTSS-TPVKIGGFGGAVQQVAAG 147
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI--SKLPYSEE-VVCGGYHT 300
G LHS + G V+ +G + ++ + A R P + +KLP + +V GG H+
Sbjct: 148 G-LHSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHS 205
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
TS E Y WG+N +G LG G
Sbjct: 206 IAYTST-EAYAWGNNASGQLGNG 227
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 259 (96.2 bits), Expect = 4.0e-22, P = 4.0e-22
Identities = 82/293 (27%), Positives = 132/293 (45%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTE---TGCVYATG 96
A+WGN + G+LG G+ S P + F +S A G +HTL + V A G
Sbjct: 53 AVWGNNESGQLGDGTTTSAATPKRLRLGFATYS-SGFATGASHTLAIARFDNVSGVRAWG 111
Query: 97 LNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
N GQ+G + S P++I G V Q++ G HS A+ G ++ WG NS GQL
Sbjct: 112 SNSAGQIGRDPATVPTSSTPVKIGGFGGAVQQVAAGGLHSMALA-GGTVWAWGSNSAGQL 170
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAAL-GFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L ++ P +VE A + G S+A T + +WG SG+LG+G
Sbjct: 171 ALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGT- 228
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ S + P+ ++ + ++ +AG H+ +D G ++ +G A ++
Sbjct: 229 --------TLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGT 280
Query: 275 GNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ LP +V G H+ + S +YTWG N G L +G
Sbjct: 281 TTNQSTPVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVG 332
Score = 243 (90.6 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 84/294 (28%), Positives = 136/294 (46%)
Query: 43 WGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ G++G ++ + PV F +++ +A GG H++ L G V+A G N
Sbjct: 110 WGSNSAGQIGRDPATVPTSSTPVKIGGFGG-AVQQVAAGGLHSMALAG-GTVWAWGSNSA 167
Query: 101 GQLGISE-NIGYSLEPLRISGLKKEVVQ--ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQL ++ + P ++ K + I G HS A T E Y WG N++GQLG
Sbjct: 168 GQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAYT-STEAYAWGNNASGQLGN 226
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + +P KV+ S I ++ + G ++A+ G + +WG+ G+LG+G
Sbjct: 227 GTTLSN--HMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGT---- 280
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+T++ TP + GV I AG HS + N VY +G + +
Sbjct: 281 -----TTNQSTPVQLTLPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLSVGTTG 335
Query: 277 HARRPSLI---SKLPYS--EEVVC-GGYHTCVLTSG-GELYTWGSNENGCLGIG 323
P+ + S +P++ E VV G + T V +G G ++ WG N G LG G
Sbjct: 336 DQLSPAQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDG 389
Score = 199 (75.1 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 58/185 (31%), Positives = 89/185 (48%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WGN G+LG G+ S P +++ ++ GG+H L L TG ++A G N
Sbjct: 213 AYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNA 272
Query: 100 FGQLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+GQLG S P++++ L V + + G HS A+ + +Y WG N+ G L
Sbjct: 273 YGQLGNGTTTNQST-PVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLLS 330
Query: 157 LGKKAAKVIPIPTKVECLSGI-FT---KQAALG-FEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G ++ P +V S + FT + LG F V G G + +WG G G+LG
Sbjct: 331 VGTTGDQLSP--AQVRDASNVPFTDVERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGD 388
Query: 212 GQESS 216
G S+
Sbjct: 389 GTTSN 393
Score = 170 (64.9 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 58/203 (28%), Positives = 93/203 (45%)
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S Y HS+ L +WG N +GQLG G + P ++ ++ A G
Sbjct: 37 SPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATP--KRLRLGFATYSSGFATGASH 94
Query: 189 SVAVT---GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
++A+ V +WG+ +G++G +++ TS TP I G ++AA
Sbjct: 95 TLAIARFDNVSGVRAWGSNSAGQIGR-DPATV-----PTSS-TPVKIGGFGGAVQQVAAG 147
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI--SKLPYSEE-VVCGGYHT 300
G LHS + G V+ +G + ++ + A R P + +KLP + +V GG H+
Sbjct: 148 G-LHSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHS 205
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
TS E Y WG+N +G LG G
Sbjct: 206 IAYTST-EAYAWGNNASGQLGNG 227
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 262 (97.3 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 87/263 (33%), Positives = 130/263 (49%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK---EVVQIST 130
++CG AH+L LT+ V++ G N +GQ G + EN YS E R+ ++ +VVQ++
Sbjct: 179 VSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYS-ESHRVHRMQDFDGQVVQVAC 237
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQS 189
G HS +T GE+Y G ++GQ GLG + PTK+ L+G+ Q A +
Sbjct: 238 GQDHSLFLTDQGEVYSCGWGADGQTGLGHY--NITSTPTKLGGDLAGVNVVQVATYGDCC 295
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFL 248
+AV+ G + WG S L Q +S+ ST PR + GV +VK AA G
Sbjct: 296 LAVSADGGLFGWG--NSEYL---QLASVTD---STQVNVPRCLP-FSGVGQVKQAACGGT 346
Query: 249 HSACIDENGRVYIFGDRAVDK---MLFQEGNHARRPSLISKLPYS-----EEVVCGGYHT 300
A ++ G V+++G + K +L P+L ++ + CG H
Sbjct: 347 GCAVLNGEGHVFVWGYGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHF 406
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
LT+ GEL+ WG N GCLGIG
Sbjct: 407 AALTNRGELFVWGKNIRGCLGIG 429
Score = 163 (62.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 85/304 (27%), Positives = 128/304 (42%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC---VYATGLNDF 100
G+G R G R +PV + + ACG TL ++T V+ GLN
Sbjct: 81 GSGPQPRAG-SRPRRRIQPVPYRLELDQKISSAACGYGFTLLSSKTKDITKVWGMGLNKD 139
Query: 101 GQLGI-----SENIGYS--LEPLRIS-GLKK----EVVQISTGYHHSSAITVDGE-LYMW 147
QLG + GY LEP + L + V+Q+S G HS +T DGE ++
Sbjct: 140 SQLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLVLT-DGEGVFSM 198
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGG 205
G NS GQ G ++ +V + + Q A G + S+ +T G+V S G G
Sbjct: 199 GNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDQGEVYSCGWGA 258
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGD 264
G+ G LG TS T +L +L GV V ++A G C+ + +FG
Sbjct: 259 DGQTG-------LGHYNITSTPT-KLGGDLAGVNVVQVATYG---DCCLAVSADGGLFGW 307
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+ + + + ++ LP+S ++ CGG VL G ++ WG G
Sbjct: 308 GNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGY---GI 364
Query: 320 LGIG 323
LG G
Sbjct: 365 LGKG 368
Score = 133 (51.9 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K ACGG L G V+ G G
Sbjct: 307 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILG 366
Query: 102 Q-LGISENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ + E + P + GL + +V +I G H +A+T GEL++WGKN G L
Sbjct: 367 KGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCL 426
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 427 GIGRLEDQYFP 437
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 268 (99.4 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 80/288 (27%), Positives = 138/288 (47%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 420 HGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 479
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP+++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 480 VAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 539
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P KV+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 540 P--QKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 597
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A +DE GR+ FG ++ GN+ +
Sbjct: 598 EVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQL--GVGNYKK 653
Query: 280 RP--SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
R +L+ ++V+ CG T T ++ WG+ NG L +
Sbjct: 654 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 701
Score = 201 (75.8 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 60/180 (33%), Positives = 89/180 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 521 WGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 580
Query: 103 LGISENIG-------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++A+ G L +G
Sbjct: 581 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGC 640
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 641 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 699
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 70/273 (25%), Positives = 116/273 (42%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 387 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 445
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K A + P +++ +Q + G
Sbjct: 446 RQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCG 505
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 506 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQKVDVPKALIIVAVQC 556
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQ--EG--NHARR---P-----SLISKLPYSE- 291
G + + ++G+V G +K+ L Q G NH P +L +L + +
Sbjct: 557 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 616
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G HT L G L T+G N+ G LG+G
Sbjct: 617 RTIAPGKTHTAALDERGRLLTFGCNKCGQLGVG 649
Score = 156 (60.0 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 46/161 (28%), Positives = 72/161 (44%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 376 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 431
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-----RAVDKMLFQEGNHARRP 281
P+ +++L+G ++ + G + C+ + G++Y FG VDK+ E +
Sbjct: 432 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQL 491
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P E+V CG H VLT E+Y+WG E G LG+
Sbjct: 492 DFFLSNPV-EQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 531
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 268 (99.4 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 80/288 (27%), Positives = 138/288 (47%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 422 HGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 481
Query: 108 NIGYS-LEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 482 VAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 541
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P KV+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 542 P--QKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 599
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 600 EVPYTTSFT--LAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQL--GVGNYKK 655
Query: 280 RP--SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
R +L+ ++V+ CG T T ++ WG+ NG L +
Sbjct: 656 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 703
Score = 202 (76.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 62/180 (34%), Positives = 90/180 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 523 WGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 582
Query: 103 LGISENIG-------YSLEPLRIS-GLKKEV--VQIST---GYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K++ +I T G H++AI G L +G
Sbjct: 583 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGC 642
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 643 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 701
Score = 172 (65.6 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 71/273 (26%), Positives = 116/273 (42%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 389 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 447
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K A + P ++ S +Q + G
Sbjct: 448 RQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCG 507
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 508 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQKVDVPKALIIVAVQC 558
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQ--EG--NHARR---P-----SLISKLPYSE- 291
G + + ++G+V G +K+ L Q G NH P +L +L + +
Sbjct: 559 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 618
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V G HT + G L T+G N+ G LG+G
Sbjct: 619 RTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 651
Score = 163 (62.4 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 47/161 (29%), Positives = 74/161 (45%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 378 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 433
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-----RAVDKMLFQEGNHARRP 281
P+ +++L+G ++ + G + C+ + G++Y FG VDK+ E +
Sbjct: 434 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 493
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ S P E+V CG H VLT E+Y+WG E G LG+
Sbjct: 494 NFFSNNPV-EQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 533
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 258 (95.9 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 92/295 (31%), Positives = 148/295 (50%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG S+ R +P + + ++A A GG HT+ L ++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGESVLERKKPALVPLLQD-VVQAEA-GGMHTVCLNQSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ L K A+ G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQ-LDMPVVKVAS-GNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPR--LIKEL--EG-VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
R E P+ L+K G V+ + A G + I G VY FG ++
Sbjct: 215 GGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGT 274
Query: 273 QEGNHARRPSLISKLPYSEEV---VCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ S + GG +HT + S G+ Y+ G E G LG+G
Sbjct: 275 PGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLG 329
Score = 209 (78.6 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 80/299 (26%), Positives = 134/299 (44%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LTE G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTEDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRV 207
Query: 158 --------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G++ + + +P V S + + F+ + G L++ G +
Sbjct: 208 PELFANRGGRQGLERLLVPKCVLLKSR--GSRGRVRFQDAFC----GAYLTFAISREGHV 261
Query: 210 -GHGQES-SILGFLRSTSEYTPRLIKELEG-VKVKIA-AAGFLHSACIDENGRVYIFGDR 265
G G + LG + S + P+ + + K + + G H+ C+D G+ Y G
Sbjct: 262 YGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRA 321
Query: 266 AVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ EG + P+LIS+LP V CG ++ G ++ WG N LG G
Sbjct: 322 EYGRLGLGEGAEEKSIPTLISRLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTG 380
Score = 168 (64.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 52/179 (29%), Positives = 82/179 (45%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + P ++ K K V S G HH
Sbjct: 247 CGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFI-PQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A + IPT + L + A G AV+
Sbjct: 306 TICMDSEGKAYSLGRAEYGRLGLGEGAEEK-SIPTLISRLPVV--SSVACGASVGYAVSK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQ+ + T K+LE V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG-------KQLENRVVLTVSSGGQHTVLL 414
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 52/183 (28%), Positives = 83/183 (45%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ E++ +P + L ++VVQ G H+ +
Sbjct: 26 SHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP-LLQDVVQAEAGGMHTVCLNQ 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L+ VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDMPVVKVAS-GNDHLVMLTTDGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 40/138 (28%), Positives = 68/138 (49%)
Query: 27 CKRWISSTLQRRFAALWGNG--DYGRLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAH 82
C +++ + R ++G G +Y +LG S + P ++F K+S K+ GG H
Sbjct: 247 CGAYLTFAISRE-GHVYGFGLSNYHQLGTPGTASCFIPQNLTSF-KNSTKSWVGFSGGQH 304
Query: 83 -TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
T+ + G Y+ G ++G+LG+ E P IS L V ++ G A++ D
Sbjct: 305 HTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPV-VSSVACGASVGYAVSKD 363
Query: 142 GELYMWGKNSNGQLGLGK 159
G ++ WG +N QLG G+
Sbjct: 364 GRVFAWGMGTNYQLGTGQ 381
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 260 (96.6 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 88/262 (33%), Positives = 126/262 (48%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKEVVQISTG 131
++CG AH+L LT+ V++ G N +GQ G + EN YS R+ +VVQ++ G
Sbjct: 185 VSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQDFDGQVVQVACG 244
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSV 190
HS +T GE+Y G ++GQ GLG + PTK+ L+G+ Q A + +
Sbjct: 245 QDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSAPTKLGGDLAGVNVVQVATYGDCCL 302
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLH 249
AV+ G + WG S L Q +S+ ST PR + GV +VK AA G
Sbjct: 303 AVSADGSLFGWG--NSEYL---QLASVTD---STQVNVPRCLP-FSGVGQVKQAACGGTG 353
Query: 250 SACIDENGRVYIFGDRAVDK--MLFQEG-NHARRPSLISKLPYSEEVV-----CGGYHTC 301
A ++ G V+++G + K L + P+L + EV CG H
Sbjct: 354 CAVLNGEGHVFVWGYGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFA 413
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LT GEL+ WG N GCLGIG
Sbjct: 414 ALTDRGELFVWGKNIRGCLGIG 435
Score = 163 (62.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 79/275 (28%), Positives = 120/275 (43%)
Query: 73 LKALACGGAHTLFLTETGCV---YATGLNDFGQLGI-----SENIGYS--LEPLRIS-GL 121
+ + ACG TL ++T V + GLN QLG + GY LEP + L
Sbjct: 115 ISSAACGYGFTLLSSKTRDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPL 174
Query: 122 KK----EVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ +V+Q+S G HS +T DGE ++ G NS GQ G ++ KV +
Sbjct: 175 HRPQETQVLQVSCGRAHSLVLT-DGEGVFSMGNNSYGQCGRKVVENEIYSESHKVHRMQD 233
Query: 177 IFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
+ Q A G + S+ +T G+V S G G G+ G LG TS T +L +
Sbjct: 234 FDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTG-------LGHYNITSAPT-KLGGD 285
Query: 235 LEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--- 290
L GV V ++A G C+ + +FG + + + + ++ LP+S
Sbjct: 286 LAGVNVVQVATYG---DCCLAVSADGSLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVG 342
Query: 291 --EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ CGG VL G ++ WG G LG G
Sbjct: 343 QVKQAACGGTGCAVLNGEGHVFVWGY---GILGKG 374
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 39/131 (29%), Positives = 59/131 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K ACGG L G V+ G G
Sbjct: 313 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILG 372
Query: 102 Q-LGISENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ + E + P + GL + V +I G H +A+T GEL++WGKN G L
Sbjct: 373 KGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDRGELFVWGKNIRGCL 432
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 433 GIGRLEDQYFP 443
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 257 (95.5 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 87/262 (33%), Positives = 127/262 (48%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKEVVQISTG 131
++CG AH+L LT+ V++ G N GQ G + E+ YS R+ + +VVQ+ G
Sbjct: 176 VSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVCG 235
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSV 190
HS +T GE+Y G ++GQ GLG + P+K+ L+G+ Q A + +
Sbjct: 236 QDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSTPSKLGGDLAGVTVVQVATYGDCCL 293
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLH 249
A++ G V WG S L Q +S+ ST PR + GV KVK A G
Sbjct: 294 ALSADGGVFGWG--NSEYL---QLASVTD---STQVNVPRCLP-FSGVGKVKQVACGGTG 344
Query: 250 SACIDENGRVYIFGDRAVDK--MLFQEG-NHARRPSLISKLPYSEEVV-----CGGYHTC 301
A ++E G V+++G + K L + P+L ++ EV CG H
Sbjct: 345 CAILNEEGHVFVWGYGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFA 404
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LT+ GEL+ WG N GCLGIG
Sbjct: 405 ALTNKGELFVWGKNIRGCLGIG 426
Score = 163 (62.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 85/303 (28%), Positives = 132/303 (43%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFG 101
+G R GL R +PV H + + ACG TL ++T V + GLN
Sbjct: 79 SGPGPRAGLRP-RRRIQPVPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDS 137
Query: 102 QLGI-----SENIGYS--LEPLRIS-GLKK----EVVQISTGYHHSSAITVDGELYMWGK 149
QLG + GY LEP + L + +V+Q+S G HS +T ++ G
Sbjct: 138 QLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGN 197
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSG 207
N++GQ G +V KV + + Q G + S+ +T G+V S G G G
Sbjct: 198 NAHGQCGRKVVEDEVYSESHKVHRMQDFEGQVVQVVCGQDHSLFLTDKGEVYSCGWGADG 257
Query: 208 RLGHGQESSILGFLRSTSEYTP-RLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDR 265
+ G LG TS TP +L +L GV V ++A G A + +G V+ +G+
Sbjct: 258 QTG-------LGHYNITS--TPSKLGGDLAGVTVVQVATYGDCCLA-LSADGGVFGWGNS 307
Query: 266 AVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+ + + + ++ LP+S ++V CGG +L G ++ WG G L
Sbjct: 308 --EYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVWGY---GIL 362
Query: 321 GIG 323
G G
Sbjct: 363 GKG 365
Score = 152 (58.6 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 42/131 (32%), Positives = 63/131 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K +ACGG L E G V+ G G
Sbjct: 304 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVWGYGILG 363
Query: 102 Q-LGISENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ +SE + P + GL + +V QI G H +A+T GEL++WGKN G L
Sbjct: 364 KGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIRGCL 423
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 424 GIGRLEDQYFP 434
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 258 (95.9 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 85/269 (31%), Positives = 126/269 (46%)
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLR-ISGLK 122
C EK +A+A G H++ +T G VY G N+ GQLG + ++P+R + G++
Sbjct: 140 CCRREKS--QAVA-GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVR 196
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
++Q + G + I+ DG++Y GK S G+ G + K + P V L IF QA
Sbjct: 197 --IIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQA 254
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR-LIKELEGVKVK 241
A+G + ++ GKV ++ G GRLGH E++ + PR L+ LE V V
Sbjct: 255 AIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAA---------DVEPRPLLGPLENVPVV 305
Query: 242 IAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVC 295
AAG+ L AC VY G K+ + P +I + L VV
Sbjct: 306 QIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVA 365
Query: 296 GG-YHTCVLTSGGELYTWGSNENGCLGIG 323
G +H V+ G + TWG GCLG G
Sbjct: 366 AGAWHAAVVGQDGRVCTWGWGRYGCLGHG 394
Score = 239 (89.2 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 81/293 (27%), Positives = 142/293 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G + G+LG G E R + + + A G A T+ +++ G VYA G FG+
Sbjct: 167 FGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGE 226
Query: 103 LGISENIGYSLEPLR----ISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+E G +P+ ++ LK VVQ + G + ++ ++ +G++Y + ++G+LG
Sbjct: 227 ---AEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGH 283
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---GGGKVLSWGAGGSGRLGHGQE 214
+AA V P P + L + Q A G+ +A+ G V S G G G+LGHG
Sbjct: 284 QTEAADVEPRPL-LGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSR 342
Query: 215 SSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
T E PR+I++ + ++ ++ AAG H+A + ++GRV +G +
Sbjct: 343 ---------TDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCL-- 391
Query: 273 QEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
GN P ++ L + + V G Y T V++ G++Y++G E+ LG
Sbjct: 392 GHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLG 444
Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 79/301 (26%), Positives = 129/301 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G +YG G + + P + ++ + + A G T L+ G VY + G+
Sbjct: 224 FGEAEYGGQGTKPVTT---PQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGR 280
Query: 103 LGISENIGYSLEPLRISG-LKK-EVVQISTGYHHSSAITV--DG-ELYMWGKNSNGQLGL 157
LG + +EP + G L+ VVQI+ GY + A+ +G +Y G G+LG
Sbjct: 281 LG-HQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGH 339
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P + + + + A G + V G+V +WG G G LGHG E
Sbjct: 340 GSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEEC- 398
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQ 273
E P++++ L VK A G + + ++G VY FG + F
Sbjct: 399 --------ESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFD 450
Query: 274 E-GN-HAR--RPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCL 320
E GN HA P++++ L E + HT LT G+L+ +G+ + G L
Sbjct: 451 EQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQL 510
Query: 321 G 321
G
Sbjct: 511 G 511
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 263 (97.6 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 80/288 (27%), Positives = 138/288 (47%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + ++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 401 HGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 460
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 461 VSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 520
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P +V+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 521 P--QRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 578
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 579 EVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQL--GVGNYKK 634
Query: 280 RP--SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
R +L+ ++V+ CG T T ++ WG+ NG L +
Sbjct: 635 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 682
Score = 202 (76.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 61/180 (33%), Positives = 89/180 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 502 WGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 561
Query: 103 LGISENIG-------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 562 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 621
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 622 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 680
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 68/273 (24%), Positives = 115/273 (42%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 368 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 426
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K + + P ++ +Q + G
Sbjct: 427 HQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCG 486
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 487 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQRVDVPKALIIVAVQC 537
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQ--EG--NHARR---P-----SLISKLPYSE- 291
G + + ++G+V G +K+ L Q G NH P +L +L + +
Sbjct: 538 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 597
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G HT + G L T+G N+ G LG+G
Sbjct: 598 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 630
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/161 (28%), Positives = 72/161 (44%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 357 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 412
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-----RAVDKMLFQEGNHARRP 281
P+ +++L+G + + G + C+ + G++Y FG VDK+ E +
Sbjct: 413 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQL 472
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ P E+V CG H VLT E+Y+WG E G LG+
Sbjct: 473 NFFLSNPV-EQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 512
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 263 (97.6 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 80/288 (27%), Positives = 138/288 (47%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + ++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 463 VSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYT 522
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P +V+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 523 P--QRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 581 EVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQL--GVGNYKK 636
Query: 280 RP--SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
R +L+ ++V+ CG T T ++ WG+ NG L +
Sbjct: 637 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 684
Score = 202 (76.2 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 61/180 (33%), Positives = 89/180 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 103 LGISENIG-------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 564 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 624 NKCGQLGVGNYK-KRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 68/273 (24%), Positives = 115/273 (42%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 370 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYR-QPKHVEKLQGKAI 428
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + +T +G+LY +G + G +G+ K + + P ++ +Q + G
Sbjct: 429 HQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCG 488
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
V +T +V SWG G GRLG E YTP+ + + + +
Sbjct: 489 DNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY---------YTPQRVDVPKALIIVAVQC 539
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQ--EG--NHARR---P-----SLISKLPYSE- 291
G + + ++G+V G +K+ L Q G NH P +L +L + +
Sbjct: 540 GCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKI 599
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G HT + G L T+G N+ G LG+G
Sbjct: 600 RTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 632
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/161 (28%), Positives = 72/161 (44%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDKASY 414
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-----RAVDKMLFQEGNHARRP 281
P+ +++L+G + + G + C+ + G++Y FG VDK+ E +
Sbjct: 415 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQL 474
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ P E+V CG H VLT E+Y+WG E G LG+
Sbjct: 475 NFFLSNPV-EQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGL 514
Score = 37 (18.1 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 195 GGKVLSWGAGGSGRLGHGQE 214
GG + G GG G G G+E
Sbjct: 752 GGGIGGGGGGGGG--GGGEE 769
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 253 (94.1 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 78/285 (27%), Positives = 127/285 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LG G+ E + P V S ++ ++A+ GG H+ ++++G + G N G
Sbjct: 42 WGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNHKG 101
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + G + V Q+S G+ + +T DG + G N+ GQLG+ +
Sbjct: 102 QLGLGHTLEIMTFQTCPLPGFGR-VQQVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAE 160
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P ++ T AA G ++A T G V WG G S +
Sbjct: 161 KTHSAE-PLLLKSFHEPVTSVAA-GLRHALASTASGCVYQWGTGLSSHAKRMLNPQPVPS 218
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKMLFQEGN 276
S+ E P L+ V + AG H AC+ NG ++++G + + LF
Sbjct: 219 HLSSKE--PCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLISGSLFLPLP 276
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
A S++ S+ V G H T G ++TWG + G LG
Sbjct: 277 VALDRSMLQDERVSD-VHSGWTHLVAQTESGRVFTWGRSNYGQLG 320
Score = 250 (93.1 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 83/300 (27%), Positives = 138/300 (46%)
Query: 44 GNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G G+LGLG +LE ++ F + ++ ++CG T+ LT G V A G N FG
Sbjct: 96 GQNHKGQLGLGHTLEIMTFQTCPLPGFGR--VQQVSCGWDFTIILTGDGLVLACGSNAFG 153
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+S +S EPL + + V ++ G H+ A T G +Y WG G K+
Sbjct: 154 QLGVSAEKTHSAEPLLLKSFHEPVTSVAAGLRHALASTASGCVYQWG---TGLSSHAKRM 210
Query: 162 AKVIPIPT----KVECL----SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
P+P+ K CL + + T++ G +T G++ WG+ G+L G
Sbjct: 211 LNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLISG- 269
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------- 263
S+ FL ++++ E +V +G+ H E+GRV+ +G
Sbjct: 270 --SL--FLPLPVALDRSMLQD-E--RVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQT 322
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +++K E + R P + L + ++ CG H + GG +++WG NE+G G G
Sbjct: 323 NHSMEKQSCDE-HLVRSPVEVKALFGATQISCGSEHNLAVV-GGRVFSWGWNEHGMCGDG 380
Score = 247 (92.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 80/242 (33%), Positives = 120/242 (49%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRI-SGLKKEVVQISTGYH-HSSAITVDGELYMWGK 149
+Y G N +GQLG N EP R+ SGL++E ++ TG HS+ I+ GEL + G+
Sbjct: 39 LYTWGANSYGQLG-QGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQ 97
Query: 150 NSNGQLGLGKKAAKVIPIPTKVEC-LSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
N GQLGLG + I T C L G +Q + G++ ++ +TG G VL+ G+ G
Sbjct: 98 NHKGQLGLGH----TLEIMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFG 153
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---D 264
+LG E T P L+K V AAG H+ +G VY +G
Sbjct: 154 QLGVSAEK--------THSAEPLLLKSFHE-PVTSVAAGLRHALASTASGCVYQWGTGLS 204
Query: 265 RAVDKMLFQEG--NH--ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+ML + +H ++ P L+ + +++V+ G H LT GEL+ WGSN++G
Sbjct: 205 SHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHG 264
Query: 319 CL 320
L
Sbjct: 265 QL 266
Score = 161 (61.7 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 54/172 (31%), Positives = 85/172 (49%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
L S+ P + F + + + G AH LT G ++ G N GQL IS ++ L P
Sbjct: 220 LSSK-EPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQL-ISGSLFLPL-P 276
Query: 116 LRI--SGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG-----LGKKAAK--VI 165
+ + S L+ E V + +G+ H A T G ++ WG+++ GQLG + K++ ++
Sbjct: 277 VALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLV 336
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P +V+ L G Q + G E ++AV GG +V SWG G G G I
Sbjct: 337 RSPVEVKALFG--ATQISCGSEHNLAVVGG-RVFSWGWNEHGMCGDGSLQDI 385
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
LWG+ +G+L GSL PV S + + + G H + TE+G V+ G ++
Sbjct: 257 LWGSNKHGQLISGSLFLPL-PVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSN 315
Query: 100 FGQLGIS------ENIGYSL--EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+GQLG + ++ L P+ + L QIS G H+ A+ V G ++ WG N
Sbjct: 316 YGQLGQTNHSMEKQSCDEHLVRSPVEVKALFG-ATQISCGSEHNLAV-VGGRVFSWGWNE 373
Query: 152 NGQLGLG--KKAAKVIPIPTKVECLS 175
+G G G + + PIP + ++
Sbjct: 374 HGMCGDGSLQDITQPQPIPALADAVA 399
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 254 (94.5 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 68/199 (34%), Positives = 108/199 (54%)
Query: 25 GICKRWISSTL-QRRFAALWGNGDYGRLGLGSLE------SRWRPVVCSAFEKHSLKALA 77
G+ +R +ST +RR +G+G+ G LGL S + P V S + +++
Sbjct: 30 GVVRRQFTSTSGERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISSIS 88
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQ--ISTGY 132
G H+L +T +G ++A G ND GQLG I + EP R+ GL+ VQ ++G
Sbjct: 89 AGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGV 148
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
S+AI DG L++WG++ GQLGLG + +P++VE L+ + +LG+ ++A+
Sbjct: 149 V-SAAIGDDGSLWVWGRSKRGQLGLGNGIIEA-RVPSRVENLAAEHVVKVSLGWGHALAL 206
Query: 193 TGGGKVLSWGAGGSGRLGH 211
T GKV WG GR+G+
Sbjct: 207 TVDGKVFGWGYVADGRVGN 225
Score = 217 (81.4 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 64/194 (32%), Positives = 96/194 (49%)
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRI 118
W P + + +ACG H+L L G + + G N +GQLG S +++G ++P+ I
Sbjct: 275 WEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLG--MKPVDI 332
Query: 119 SGLKKEVVQISTGYHHSSAITVDGE--LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ + + I+ G HS AI GE + WG N + QLG GK +P +VE G
Sbjct: 333 T---ESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN----LPREVEGFDG 385
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ G S+ VT G+ WG G +GRLG G S+ E P L++++E
Sbjct: 386 ESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGS---------SSDEPEPMLLEDVE 436
Query: 237 GVKVKIAAAGFLHS 250
G ++ A AGF HS
Sbjct: 437 GCVLQ-AVAGFDHS 449
Score = 173 (66.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 51/183 (27%), Positives = 86/183 (46%)
Query: 88 ETGCVYATGLNDFGQLGISEN----IGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
E V + G + G LG+S + +G + EP +S L ++ IS G++HS A+T G
Sbjct: 42 ERRTVMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDISSISAGHYHSLAVTSSG 101
Query: 143 ELYMWGKNSNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
E++ WG+N GQLG + + P +VE L + + A S A+ G +
Sbjct: 102 EIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLWV 161
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G+LG G G + + P ++ L V + G+ H+ + +G+V+
Sbjct: 162 WGRSKRGQLGLGN-----GIIEAR---VPSRVENLAAEHVVKVSLGWGHALALTVDGKVF 213
Query: 261 IFG 263
+G
Sbjct: 214 GWG 216
Score = 160 (61.4 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 56/185 (30%), Positives = 89/185 (48%)
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
DG L G +S+ G+G A + PT V L + +A G S+AVT G++ +
Sbjct: 51 DGNLGALGLSSSSIPGMGMDAYE----PTVVSNLPSDISSISA-GHYHSLAVTSSGEIWA 105
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G+LG ++ R S P+ ++ LE V V+ A A + SA I ++G ++
Sbjct: 106 WGRNDEGQLGR----IVIDSSRD-SRSEPKRVEGLENVNVQAAFASGVVSAAIGDDGSLW 160
Query: 261 IFGDRAVDKMLFQEGN-HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
++G ++ G AR PS + L +E VV G H LT G+++ WG
Sbjct: 161 VWGRSKRGQLGLGNGIIEARVPSRVENLA-AEHVVKVSLGWGHALALTVDGKVFGWGYVA 219
Query: 317 NGCLG 321
+G +G
Sbjct: 220 DGRVG 224
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 47/152 (30%), Positives = 71/152 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG--CVYATGLNDFG 101
G+ YG+LG + +PV + S ++A G H+L + G + + G N
Sbjct: 311 GSNIYGQLGRSKQDLGMKPVDIT----ESPISIAAGLGHSLAICNRGERNILSWGWNRSR 366
Query: 102 QLGIS--ENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG EN+ P + G E +S G HS +T GE ++WG NG+LGLG
Sbjct: 367 QLGRGKPENL-----PREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLG 421
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
+ + P P +E + G QA GF+ S+
Sbjct: 422 SSSDE--PEPMLLEDVEGCVL-QAVAGFDHSL 450
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 254 (94.5 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 86/262 (32%), Positives = 125/262 (47%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKEVVQISTG 131
++CG AH+L LT+ V++ G N GQ G + E+ YS R+ +VVQ+ G
Sbjct: 176 VSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCG 235
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSV 190
HS +T GE+Y G ++GQ GLG + P+K+ L+G+ Q A + +
Sbjct: 236 QDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSTPSKLGGDLAGVTVVQVATYGDCCL 293
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLH 249
A++ G V WG S L Q +S+ ST PR + GV KVK A G
Sbjct: 294 ALSADGGVFGWG--NSEYL---QLASVTD---STQVNVPRCLP-FSGVGKVKQVACGGTG 344
Query: 250 SACIDENGRVYIFGDRAVDK--MLFQEG-NHARRPSLISKLPYSEEVV-----CGGYHTC 301
A ++ G V+++G + K L + P+L ++ EV CG H
Sbjct: 345 CAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFA 404
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LT+ GEL+ WG N GCLGIG
Sbjct: 405 ALTNKGELFVWGKNIRGCLGIG 426
Score = 168 (64.2 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 87/303 (28%), Positives = 133/303 (43%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFG 101
+G R GL R +PV H + + ACG TL ++T V + GLN
Sbjct: 79 SGPGPRAGLRP-RRRIQPVPYRLELDHKISSAACGYGFTLLSSKTKDVTKVWGMGLNKDS 137
Query: 102 QLGI-----SENIGYS--LEPLRIS-GLKK----EVVQISTGYHHSSAITVDGELYMWGK 149
QLG + GY LEP + L + +V+Q+S G HS +T ++ G
Sbjct: 138 QLGFHRSRKDKTRGYEYVLEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGN 197
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSG 207
NS+GQ G +V KV + + Q G + S+ +T G+V S G G G
Sbjct: 198 NSHGQCGRKVVEDEVYSESHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADG 257
Query: 208 RLGHGQESSILGFLRSTSEYTP-RLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDR 265
+ G LG TS TP +L +L GV V ++A G A + +G V+ +G+
Sbjct: 258 QTG-------LGHYNITS--TPSKLGGDLAGVTVVQVATYGDCCLA-LSADGGVFGWGNS 307
Query: 266 AVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+ + + + ++ LP+S ++V CGG VL + G ++ WG G L
Sbjct: 308 --EYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGY---GIL 362
Query: 321 GIG 323
G G
Sbjct: 363 GKG 365
Score = 140 (54.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 41/131 (31%), Positives = 60/131 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K +ACGG L G V+ G G
Sbjct: 304 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILG 363
Query: 102 ------QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ I E I +L L + +V QI G H +A+T GEL++WGKN G L
Sbjct: 364 KGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCL 423
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 424 GIGRLEDQYFP 434
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 260 (96.6 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 79/284 (27%), Positives = 130/284 (45%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +GI +
Sbjct: 413 HGQLGHGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDK 472
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEPL++ L V Q+S G +H + +T + E+Y WG G+LGL +
Sbjct: 473 AYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYT 532
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG---FL 221
P KV+ + G + + +T GKVL+ G +LG Q S I+ +
Sbjct: 533 P--QKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYC 590
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARR 280
+ L K+L K++ + G H+A IDE GR+ FG ++ + H
Sbjct: 591 EVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGI 650
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
L L + V CG T T ++ WG+ NG L +
Sbjct: 651 NLLAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 694
Score = 212 (79.7 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 62/180 (34%), Positives = 90/180 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + ++ ++ CG T LT+TG V A GLN+F +
Sbjct: 514 WGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNK 573
Query: 103 LGISE-NIG------YSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ G Y P S L K+ + IS G H+++I G L +G
Sbjct: 574 LGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGS 633
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 634 NKCGQLGVGDYK-KHLGINLLAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 692
Score = 159 (61.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 68/273 (24%), Positives = 114/273 (41%)
Query: 72 SLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLK-KEV 125
S + + G H +T +Y G GQLG + Y +P + L+ K +
Sbjct: 380 SARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYR-QPKHVEKLQGKAI 438
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
Q+S G + IT +G+LY +G + G +G+ K + P +++ +Q + G
Sbjct: 439 RQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCG 498
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+T +V +WG G GRLG E YTP+ + + + +
Sbjct: 499 DNHVAVLTRNREVYTWGCGEYGRLGLDSEED---------HYTPQKVDVPKTLNIVSVHC 549
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQ--EG--NH--------ARRPSLISKLPYSE- 291
G + + + G+V G +K+ L Q G NH A +L +L + +
Sbjct: 550 GCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKI 609
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G HT + G L T+GSN+ G LG+G
Sbjct: 610 RTISPGKTHTASIDERGRLLTFGSNKCGQLGVG 642
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 47/161 (29%), Positives = 71/161 (44%)
Query: 168 PTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P K++ + SG +Q G VT ++ +W G HGQ LG S
Sbjct: 369 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQ----LGHGDRASY 424
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR-----AVDKMLFQEGNHARRP 281
P+ +++L+G ++ + G + CI + G++Y FG +DK E +
Sbjct: 425 RQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQL 484
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P E+V CG H VLT E+YTWG E G LG+
Sbjct: 485 DFFLTNPV-EQVSCGDNHVAVLTRNREVYTWGCGEYGRLGL 524
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 252 (93.8 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 73/258 (28%), Positives = 117/258 (45%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
++K +ACG T LT+ G + G G LG N+ +P + L E+VQ++
Sbjct: 398 TIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHG-NLTDISQPTIVEALLGYEMVQVAC 456
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G H A++ DGEL+ WG+ G+LGLG + + P +V G ++ G + S+
Sbjct: 457 GASHVLALSTDGELFAWGRGDGGRLGLGTRESH--NCPQQVPVAPGQEAQRVVCGIDSSM 514
Query: 191 AVTGGGKVLSWGAGGSGRLG--H---GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+T G+VL+ G+ +LG H +E + +TP L+ +
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDL 574
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVL 303
G HSA I +G Y FG ++ +R P + L + V+ CG T +
Sbjct: 575 GTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAV 634
Query: 304 TSGGELYTWGSNENGCLG 321
+ GE+Y+WG G LG
Sbjct: 635 GAEGEVYSWGKGTRGRLG 652
Score = 245 (91.3 bits), Expect = 8.8e-20, P = 8.8e-20
Identities = 68/188 (36%), Positives = 92/188 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLGLG+ ES P + + CG ++ LT G V A G N F +
Sbjct: 473 WGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNK 532
Query: 103 LGIS------ENIGY-------SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWG 148
LG+ E + Y S PL + L +E ++ + G HS+AIT G+ Y +G
Sbjct: 533 LGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFG 592
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N +GQLG + +V P +V+ L GI A G +VAV G+V SWG G GR
Sbjct: 593 SNQHGQLGTSSR--RVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGR 650
Query: 209 LGHGQESS 216
LG E +
Sbjct: 651 LGRRDEDA 658
Score = 181 (68.8 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 65/236 (27%), Positives = 106/236 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG G+L +P + A + + +ACG +H L L+ G ++A G D G+
Sbjct: 421 FGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGR 480
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ ++ P ++ +E ++ G S +T G + G N +LGL +
Sbjct: 481 LGLGTRESHNC-PQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLS 539
Query: 162 AKVIPIPTKV--ECLSGIFTKQAA------------LGFEQSVAVTGGGKVLSWGAGGSG 207
P+P + E LS FT + LG S A+T G ++G+ G
Sbjct: 540 LDEEPVPYQQVEEALS--FTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHG 597
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LG SS R S P ++ LEG+K+ + A G + + G VY +G
Sbjct: 598 QLG---TSS-----RRVSR-APCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWG 644
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 63/217 (29%), Positives = 99/217 (45%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--KAAKVIPIPTKV- 171
PLR+ L EVVQ++ G + +T G L +W G G G A +P P V
Sbjct: 330 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG-GTLLPGAVELPQPQFVS 388
Query: 172 ---ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
E SG+ K A G + +T G ++++G+G +G LGHG + I S+
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDI-------SQ-- 439
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL 287
P +++ L G ++ A G H + +G ++ +G ++ L +H P +
Sbjct: 440 PTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESH-NCPQQVPVA 498
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P E VVCG + +LTS G + GSN LG+
Sbjct: 499 PGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGL 535
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVK 239
Q A G Q VT G+++ W A LG G + + G + ++ R ++ GV
Sbjct: 342 QVAAGRTQKAGVTRSGRLILWEAPP---LGAGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
+K A G L +AC+ + G + FG + + +P+++ L E +V CG
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGA 458
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
H L++ GEL+ WG + G LG+G
Sbjct: 459 SHVLALSTDGELFAWGRGDGGRLGLG 484
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 74/231 (32%), Positives = 123/231 (53%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFG 263
R E P+ + + G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFG 265
Score = 178 (67.7 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L+ VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDVPVVKVAS-GNDHLVMLTADGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 156 (60.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 61/204 (29%), Positives = 100/204 (49%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
K + V++S H S T G + G+ GQLGLG+ + P V + Q
Sbjct: 19 KSKKVKVS----HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKK-PALVSIPEDVV--Q 71
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G +V ++ G+V S+G G LG +++S+ G SE P + EL+ V+
Sbjct: 72 AEAGGMHTVCLSKSGQVYSFGCNDEGALG--RDTSVEG-----SEMVPGKV-ELQEKVVQ 123
Query: 242 IAAAGFLHSACIDENGRVYIFGD-RAVDKM--LFQEGNHARRPSLIS-KLPYSEEVVCGG 297
++A G H+A + ++GRV+++G R + + L + + P + +P + V G
Sbjct: 124 VSA-GDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVK-VASGN 181
Query: 298 YHTCVLTSGGELYTWGSNENGCLG 321
H +LT+ G+LYT G E G LG
Sbjct: 182 DHLVMLTADGDLYTLGCGEQGQLG 205
Score = 125 (49.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 39/118 (33%), Positives = 62/118 (52%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LT+ G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 74/231 (32%), Positives = 123/231 (53%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANR 214
Query: 220 FLRSTSE--YTPRLIK-ELEG----VKVKIAAAGFLHSACIDENGRVYIFG 263
R E P+ + + G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFG 265
Score = 179 (68.1 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 64/253 (25%), Positives = 113/253 (44%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 142
Query: 201 WGA--GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK--VKIAAAGFLHS-ACIDE 255
WG+ +G +G E + + ++K G V + A G L++ C ++
Sbjct: 143 WGSFRDNNGVIGL-LEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQ 201
Query: 256 N--GRV-YIFGDRA----VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
GRV +F +R ++++L + + + + ++ CG Y T ++ G
Sbjct: 202 GQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRF-QDAFCGAYFTFAISHEGH 260
Query: 309 LYTWGSNENGCLG 321
+Y +G + LG
Sbjct: 261 VYGFGLSNYHQLG 273
Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 39/118 (33%), Positives = 62/118 (52%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LT+ G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 243 (90.6 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 83/268 (30%), Positives = 129/268 (48%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKE 124
+K + ++CG AH+L LT++ V+ G N +GQ G + E+ YS L +++
Sbjct: 163 QKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSR 222
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAA 183
VVQ+ G HS T G ++ G ++GQ GLG + +PTK+ ++G+ Q +
Sbjct: 223 VVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHY--NITSVPTKLGGDIAGVNIVQVS 280
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
+ +AV+ G + WG S L Q +S+ +T PR + G K+K A
Sbjct: 281 SYGDCCLAVSDEGDLFGWG--NSEYL---QLASVT---ETTQVNVPRHLPFKIG-KIKEA 331
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDK--MLFQEG-NHARRPSLISKLPYSEEVV-----C 295
A G + + E G V+++G + K L + PSL +S +V C
Sbjct: 332 ACGGTGNIVLTEEGAVFVWGYGILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRC 391
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H LT+ GEL+ WG N GCLGIG
Sbjct: 392 GLSHFAALTNRGELFVWGKNLRGCLGIG 419
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 88/325 (27%), Positives = 140/325 (43%)
Query: 29 RWISSTLQRRFAA-LWGNGDYGRLGLGSL---ESRW---RPVVCSAFE---KHSLKALAC 78
+++ ++R+ +WG G LG+ S ++ W R + + + + + + AC
Sbjct: 46 QYVGKAVKRKDRVFVWGFSYSGALGVPSFVKPDAGWKKPRRIQATPYRLETEEKITSAAC 105
Query: 79 GGAHTLF---LTETGCVYATGLNDFGQLGISENI-----GYS--LEPLRIS-GLKK---- 123
G TL T+ V+ GLN QLG +I GY LEP I L+K
Sbjct: 106 GYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDRTKGYEYVLEPSPIPLPLEKPQKT 165
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--Q 181
V+Q+S G HS +T ++ G NS GQ G ++ + L+ ++ Q
Sbjct: 166 RVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIHQLNDFDSRVVQ 225
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK-V 240
G + S+ T G V + G G G+ G LG TS T +L ++ GV V
Sbjct: 226 VVCGQDHSLFRTKKGAVFACGWGADGQTG-------LGHYNITSVPT-KLGGDIAGVNIV 277
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKML-FQEGNHARRPS-LISKLPYSEEVVCGGY 298
++++ G A DE G ++ +G+ ++ E P L K+ +E CGG
Sbjct: 278 QVSSYGDCCLAVSDE-GDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIKEAACGGT 336
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
VLT G ++ WG G LG G
Sbjct: 337 GNIVLTEEGAVFVWGY---GILGKG 358
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 44/135 (32%), Positives = 64/135 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCS--AFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +Y L L S+ + V F+ +K ACGG + LTE G V+ G +
Sbjct: 298 WGNSEY--LQLASVTETTQVNVPRHLPFKIGKIKEAACGGTGNIVLTEEGAVFVWG---Y 352
Query: 101 GQLGISENIGYSLEPLRI-------SGLKKEV--VQISTGYHHSSAITVDGELYMWGKNS 151
G LG N+ + P I S +V ++ G H +A+T GEL++WGKN
Sbjct: 353 GILGKGPNLTETAVPEMIPPSLFGWSDFSSDVRVARVRCGLSHFAALTNRGELFVWGKNL 412
Query: 152 NGQLGLGKKAAKVIP 166
G LG+G+ + P
Sbjct: 413 RGCLGIGRMEDQYFP 427
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 247 (92.0 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 82/290 (28%), Positives = 130/290 (44%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLND 99
G G G L G++E +P S F E S +K +ACG T LT+ G + G
Sbjct: 368 GTGG-GTLLPGAVELP-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGS 425
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG S +P + L E+VQ++ G H A++ DGEL+ WG+ G+LGLG
Sbjct: 426 NGCLGHGSLTDIS-QPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLG 484
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG----QE 214
+ + P +V + G ++ G + S+ +T G+VL+ G+ +LG +E
Sbjct: 485 TRESH--NCPQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEE 542
Query: 215 SSILGF-LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ + +TP L+ + G HSA + +G Y FG ++
Sbjct: 543 EPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTS 602
Query: 274 EGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLG 321
+R P + L + V+ CG T + + GE+Y+WG G LG
Sbjct: 603 SRRVSRAPCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGRLG 652
Score = 236 (88.1 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 65/188 (34%), Positives = 90/188 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLGLG+ ES P + + CG ++ LT G V A G N F +
Sbjct: 473 WGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNK 532
Query: 103 LGIS------ENIGY-------SLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWG 148
LG+ E + + S PL + L +E + + G HS+A+T G Y +G
Sbjct: 533 LGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFG 592
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N +GQLG + +V P +V+ L GI A G +VA+ G+V SWG G GR
Sbjct: 593 SNQHGQLGTSSR--RVSRAPCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGKGARGR 650
Query: 209 LGHGQESS 216
LG E +
Sbjct: 651 LGRRDEDA 658
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 69/239 (28%), Positives = 109/239 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG GSL +P + A + + +ACG +H L L+ G ++A G D G+
Sbjct: 421 FGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGR 480
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ ++ P ++ + +E ++ G S +T G + G N +LGL +
Sbjct: 481 LGLGTRESHNC-PQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLS 539
Query: 162 AKVIPIPTKV--ECLSGIFTKQAA------------LGFEQSVAVTGGGKVLSWGAGGSG 207
+ P+P + E LS FT + LG S AVT G ++G+ G
Sbjct: 540 LEEEPVPHQQVEEALS--FTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHG 597
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG SS R S P ++ LEG+K+ + A G + I G VY +G A
Sbjct: 598 QLG---TSS-----RRVSR-APCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWGKGA 647
Score = 171 (65.3 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 64/222 (28%), Positives = 102/222 (45%)
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--KAAKVIPI 167
G S+ PLR+ EVVQ++ G + +T G L +W G G G A +P
Sbjct: 326 GLSI-PLRLPMPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGG-GTLLPGAVELPQ 383
Query: 168 PTKV----ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P V E SG+ K A G + +T G ++++G+G +G LGHG + I
Sbjct: 384 PQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDI------ 437
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPS 282
S+ P +++ L G ++ A G H + +G ++ +G ++ L +H P
Sbjct: 438 -SQ--PTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESH-NCPQ 493
Query: 283 LISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ +P E VVCG + +LTS G + GSN LG+
Sbjct: 494 QVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGL 535
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVK 239
Q A G Q VT G+++ W A LG G + + G + ++ R ++ GV
Sbjct: 342 QVAAGRTQKAGVTRSGRLILWEAPP---LGTGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
+K A G L +AC+ + G + FG + + +P+++ L E +V CG
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGA 458
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
H L++ GEL+ WG + G LG+G
Sbjct: 459 SHVLALSADGELFAWGRGDGGRLGLG 484
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 61/175 (34%), Positives = 104/175 (59%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
K + +P +V+ + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPE 209
Score = 178 (67.7 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 53/183 (28%), Positives = 85/183 (46%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG S R +G ++G L + + +L+ VK+A+ G H + +G +Y
Sbjct: 143 WG---SFRDNNG----VIGLLEPMKKSMVPVQVQLDVPVVKVAS-GNDHLVMLTADGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 156 (60.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 61/204 (29%), Positives = 100/204 (49%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
K + V++S H S T G + G+ GQLGLG+ + P V + Q
Sbjct: 19 KSKKVKVS----HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKK-PALVSIPEDVV--Q 71
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G +V ++ G+V S+G G LG +++S+ G SE P + EL+ V+
Sbjct: 72 AEAGGMHTVCLSKSGQVYSFGCNDEGALG--RDTSVEG-----SEMVPGKV-ELQEKVVQ 123
Query: 242 IAAAGFLHSACIDENGRVYIFGD-RAVDKM--LFQEGNHARRPSLIS-KLPYSEEVVCGG 297
++A G H+A + ++GRV+++G R + + L + + P + +P + V G
Sbjct: 124 VSA-GDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVPVVK-VASGN 181
Query: 298 YHTCVLTSGGELYTWGSNENGCLG 321
H +LT+ G+LYT G E G LG
Sbjct: 182 DHLVMLTADGDLYTLGCGEQGQLG 205
Score = 125 (49.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/118 (33%), Positives = 62/118 (52%)
Query: 43 WGNGDYGRLGLG-SLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG S+E S P EK + ++ G +HT LT+ G V+ G +
Sbjct: 91 FGCNDEGALGRDTSVEGSEMVPGKVELQEK--VVQVSAGDSHTAALTDDGRVFLWGSFRD 148
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ G +G+ E + S+ P+++ L VV++++G H +T DG+LY G GQLG
Sbjct: 149 NNGVIGLLEPMKKSMVPVQVQ-LDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 251 (93.4 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 84/298 (28%), Positives = 138/298 (46%)
Query: 37 RRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
R LW G+ +G+LG G+ +R PV + K +A G H+L + G ++A
Sbjct: 48 RSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG----TWKTVAAGTTHSLGIKADGSLWA 103
Query: 95 TGLNDFGQLG---ISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
G N FGQLG ++ + + P+RI G + V +S G S + DG L+ WG N
Sbjct: 104 WGSNLFGQLGQPLVNGQLATNKFSPIRI-GTGNDWVAVSAGELTSFGLKGDGTLWSWGNN 162
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G ++ P+ + LS G + AA G E ++A+ G + +WGA +G+L
Sbjct: 163 LFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAA-GGEHALALQADGTLWAWGANLTGQL 221
Query: 210 GHGQESSILGFLRSTSEYTPRLI-KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
G G G L + TP I + + + +AG +HS + +G ++ +G
Sbjct: 222 GTGGT----GILPNP---TPLKIGTDRDWTAI---SAGEMHSVALKADGSLWSWGQNLFG 271
Query: 269 KM---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + G + P+ + + G HT L G + WG+N G +G G
Sbjct: 272 ELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDG 329
Score = 230 (86.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 85/297 (28%), Positives = 127/297 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ + P V SA L + GGA +L L G ++A G N GQ
Sbjct: 371 WGGNGAGQLGNGTFGAVTAPTVLSAGASAWL-GVEPGGAFSLGLRSNGTLWAWGGNASGQ 429
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+ + G +TG HS A+ DG L+ WG NS+GQLG+G A
Sbjct: 430 LGDGTTTPSAI-PVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVA 488
Query: 163 KVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P I +G A G S+ + G + SWG G+LG G +S
Sbjct: 489 ASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSN--- 545
Query: 221 LRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-----DKMLFQE 274
R+T + + V +AA G + S + +G ++ +GD ++ D +
Sbjct: 546 -RTTPVQIVTGNPGNFDRNWVAVAAGG-VFSLALQADGTIWTWGDNSLLQLGTDPAMLTP 603
Query: 275 GNHARRPSLISKL-PYSEE-------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ ++ P S + G H L + G L+ WG+N G LG G
Sbjct: 604 ATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNG 660
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 75/291 (25%), Positives = 123/291 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G P A++ G H++ L G +++ G N FG+
Sbjct: 213 WGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGE 272
Query: 103 LGISENI-GYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G ++ P R+ G + V I+ G H+ A+ +G + WG N+ G +G G
Sbjct: 273 LGNGVALPGANVTTPTRV-GTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTV 331
Query: 161 AAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A + P I V ++ + A G S +V G V WG G+G+LG+G ++
Sbjct: 332 ANRSTPTLIVAPVTLVNNV---AIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVT 388
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P ++ + + G S + NG ++ +G A ++ G+
Sbjct: 389 A---------PTVLSAGASAWLGVEPGGAF-SLGLRSNGTLWAWGGNASGQL----GDGT 434
Query: 279 RRPSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
PS I +P G H+ + + G L+ WG N +G LGIG
Sbjct: 435 TTPSAIP-VPVVGGAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIG 484
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 71/255 (27%), Positives = 110/255 (43%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A GG H L L G ++A G N FGQLG I + P+++ G K V + G HS
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT-SPVQVPGTWKTV---AAGTTHS 92
Query: 136 SAITVDGELYMWGKNSNGQLGL----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
I DG L+ WG N GQLG G+ A P ++ +G + G S
Sbjct: 93 LGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFS-PIRIG--TGNDWVAVSAGELTSFG 149
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G G + SWG G LG G +++ S + + L + AAG H+
Sbjct: 150 LKGDGTLWSWGNNLFGELGDG--TTV-----SRPQPVQVVADPLSNGRYVAVAAGGEHAL 202
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
+ +G ++ +G ++ P+ + K+ + + G H+ L + G
Sbjct: 203 ALQADGTLWAWGANLTGQLGTGGTGILPNPTPL-KIGTDRDWTAISAGEMHSVALKADGS 261
Query: 309 LYTWGSNENGCLGIG 323
L++WG N G LG G
Sbjct: 262 LWSWGQNLFGELGNG 276
Score = 195 (73.7 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 69/242 (28%), Positives = 102/242 (42%)
Query: 43 WGNGDYGRLGLGS-LESRWRPV-VCSA----FEKHSLKALACGGAHTLFLTETGCVYATG 96
WG+ +G+LG G+ +R PV + + F+++ + A+A GG +L L G ++ G
Sbjct: 529 WGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWV-AVAAGGVFSLALQADGTIWTWG 587
Query: 97 LNDFGQLGIS---------ENIGYSLEPLR--ISGLKKEVVQISTGYHHSSAITVDGELY 145
N QLG N+ L + V I+ G H ++ DG L+
Sbjct: 588 DNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLW 647
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
WG NS GQLG G A P+ +V G+ A G S+A G + +WG
Sbjct: 648 AWGANSVGQLGNGVTTATFTPV--QVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNT 705
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK----IAAAGFLHSACIDENGRVYI 261
SG+LG G L P I V +A AG HSA + NG ++
Sbjct: 706 SGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWT 765
Query: 262 FG 263
+G
Sbjct: 766 WG 767
Score = 161 (61.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 56/205 (27%), Positives = 94/205 (45%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V ++ G +H + DG L+ G N GQLG G + P+ + G + K A
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQ-----VPGTW-KTVAA 87
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S+ + G + +WG+ G+LG + + G L +T++++P I+ G +
Sbjct: 88 GTTHSLGIKADGSLWAWGSNLFGQLG---QPLVNGQL-ATNKFSP--IRIGTGNDWVAVS 141
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSE----EVVCGGY 298
AG L S + +G ++ +G+ ++ +G RP + + P S V GG
Sbjct: 142 AGELTSFGLKGDGTLWSWGNNLFGEL--GDGTTVSRPQPVQVVADPLSNGRYVAVAAGGE 199
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
H L + G L+ WG+N G LG G
Sbjct: 200 HALALQADGTLWAWGANLTGQLGTG 224
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 60/222 (27%), Positives = 93/222 (41%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLG-----LGKKAAKVIPIPTKVECL-SGIFT 179
V ++ G S A+ DG ++ WG NS QLG L + +P V S F
Sbjct: 565 VAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFN 624
Query: 180 KQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G + +++ G + +WGA G+LG+G +T+ +TP + E
Sbjct: 625 SSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGV---------TTATFTPVQVINAE 675
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF--QEGN--------HARRPSLISK 286
GV AAG HS +G ++ +G+ ++ G+ H +++
Sbjct: 676 GVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTS 735
Query: 287 LPYSEE-----VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P S GG H+ L S G L+TWG N +G LG G
Sbjct: 736 NPVSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNG 777
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G + + PV E +LA G +H+L G ++A G N GQ
Sbjct: 649 WGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQ 708
Query: 103 LGISENIG----YSLEPLRISG--LKKEVVQ------IST-GYHHSSAITVDGELYMWGK 149
LG + G + +P + L V ++T G HS+A+ +G L+ WG+
Sbjct: 709 LGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQ 768
Query: 150 NSNGQLGLGKKAAKVIP 166
N++GQLG G IP
Sbjct: 769 NTSGQLGNGTTTEADIP 785
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 251 (93.4 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 84/298 (28%), Positives = 138/298 (46%)
Query: 37 RRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
R LW G+ +G+LG G+ +R PV + K +A G H+L + G ++A
Sbjct: 48 RSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG----TWKTVAAGTTHSLGIKADGSLWA 103
Query: 95 TGLNDFGQLG---ISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
G N FGQLG ++ + + P+RI G + V +S G S + DG L+ WG N
Sbjct: 104 WGSNLFGQLGQPLVNGQLATNKFSPIRI-GTGNDWVAVSAGELTSFGLKGDGTLWSWGNN 162
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G ++ P+ + LS G + AA G E ++A+ G + +WGA +G+L
Sbjct: 163 LFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAA-GGEHALALQADGTLWAWGANLTGQL 221
Query: 210 GHGQESSILGFLRSTSEYTPRLI-KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
G G G L + TP I + + + +AG +HS + +G ++ +G
Sbjct: 222 GTGGT----GILPNP---TPLKIGTDRDWTAI---SAGEMHSVALKADGSLWSWGQNLFG 271
Query: 269 KM---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + G + P+ + + G HT L G + WG+N G +G G
Sbjct: 272 ELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDG 329
Score = 230 (86.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 85/297 (28%), Positives = 127/297 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ + P V SA L + GGA +L L G ++A G N GQ
Sbjct: 371 WGGNGAGQLGNGTFGAVTAPTVLSAGASAWL-GVEPGGAFSLGLRSNGTLWAWGGNASGQ 429
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+ + G +TG HS A+ DG L+ WG NS+GQLG+G A
Sbjct: 430 LGDGTTTPSAI-PVPVVGGAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVA 488
Query: 163 KVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P I +G A G S+ + G + SWG G+LG G +S
Sbjct: 489 ASTPQQITVTNPASAGNDWTAVAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSN--- 545
Query: 221 LRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-----DKMLFQE 274
R+T + + V +AA G + S + +G ++ +GD ++ D +
Sbjct: 546 -RTTPVQIVTGNPGNFDRNWVAVAAGG-VFSLALQADGTIWTWGDNSLLQLGTDPAMLTP 603
Query: 275 GNHARRPSLISKL-PYSEE-------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ ++ P S + G H L + G L+ WG+N G LG G
Sbjct: 604 ATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNG 660
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 75/291 (25%), Positives = 123/291 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G P A++ G H++ L G +++ G N FG+
Sbjct: 213 WGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADGSLWSWGQNLFGE 272
Query: 103 LGISENI-GYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G ++ P R+ G + V I+ G H+ A+ +G + WG N+ G +G G
Sbjct: 273 LGNGVALPGANVTTPTRV-GTGSDWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTV 331
Query: 161 AAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A + P I V ++ + A G S +V G V WG G+G+LG+G ++
Sbjct: 332 ANRSTPTLIVAPVTLVNNV---AIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVT 388
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P ++ + + G S + NG ++ +G A ++ G+
Sbjct: 389 A---------PTVLSAGASAWLGVEPGGAF-SLGLRSNGTLWAWGGNASGQL----GDGT 434
Query: 279 RRPSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
PS I +P G H+ + + G L+ WG N +G LGIG
Sbjct: 435 TTPSAIP-VPVVGGAGNWRTTATGTAHSVAVRADGTLWAWGDNSSGQLGIG 484
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 71/255 (27%), Positives = 110/255 (43%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A GG H L L G ++A G N FGQLG I + P+++ G K V + G HS
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRT-SPVQVPGTWKTV---AAGTTHS 92
Query: 136 SAITVDGELYMWGKNSNGQLGL----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
I DG L+ WG N GQLG G+ A P ++ +G + G S
Sbjct: 93 LGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFS-PIRIG--TGNDWVAVSAGELTSFG 149
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G G + SWG G LG G +++ S + + L + AAG H+
Sbjct: 150 LKGDGTLWSWGNNLFGELGDG--TTV-----SRPQPVQVVADPLSNGRYVAVAAGGEHAL 202
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
+ +G ++ +G ++ P+ + K+ + + G H+ L + G
Sbjct: 203 ALQADGTLWAWGANLTGQLGTGGTGILPNPTPL-KIGTDRDWTAISAGEMHSVALKADGS 261
Query: 309 LYTWGSNENGCLGIG 323
L++WG N G LG G
Sbjct: 262 LWSWGQNLFGELGNG 276
Score = 195 (73.7 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 69/242 (28%), Positives = 102/242 (42%)
Query: 43 WGNGDYGRLGLGS-LESRWRPV-VCSA----FEKHSLKALACGGAHTLFLTETGCVYATG 96
WG+ +G+LG G+ +R PV + + F+++ + A+A GG +L L G ++ G
Sbjct: 529 WGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWV-AVAAGGVFSLALQADGTIWTWG 587
Query: 97 LNDFGQLGIS---------ENIGYSLEPLR--ISGLKKEVVQISTGYHHSSAITVDGELY 145
N QLG N+ L + V I+ G H ++ DG L+
Sbjct: 588 DNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLSLQADGTLW 647
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
WG NS GQLG G A P+ +V G+ A G S+A G + +WG
Sbjct: 648 AWGANSVGQLGNGVTTATFTPV--QVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNT 705
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK----IAAAGFLHSACIDENGRVYI 261
SG+LG G L P I V +A AG HSA + NG ++
Sbjct: 706 SGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWT 765
Query: 262 FG 263
+G
Sbjct: 766 WG 767
Score = 161 (61.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 56/205 (27%), Positives = 94/205 (45%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V ++ G +H + DG L+ G N GQLG G + P+ + G + K A
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQ-----VPGTW-KTVAA 87
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S+ + G + +WG+ G+LG + + G L +T++++P I+ G +
Sbjct: 88 GTTHSLGIKADGSLWAWGSNLFGQLG---QPLVNGQL-ATNKFSP--IRIGTGNDWVAVS 141
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSE----EVVCGGY 298
AG L S + +G ++ +G+ ++ +G RP + + P S V GG
Sbjct: 142 AGELTSFGLKGDGTLWSWGNNLFGEL--GDGTTVSRPQPVQVVADPLSNGRYVAVAAGGE 199
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
H L + G L+ WG+N G LG G
Sbjct: 200 HALALQADGTLWAWGANLTGQLGTG 224
Score = 156 (60.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 60/222 (27%), Positives = 93/222 (41%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLG-----LGKKAAKVIPIPTKVECL-SGIFT 179
V ++ G S A+ DG ++ WG NS QLG L + +P V S F
Sbjct: 565 VAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFN 624
Query: 180 KQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G + +++ G + +WGA G+LG+G +T+ +TP + E
Sbjct: 625 SSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGV---------TTATFTPVQVINAE 675
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF--QEGN--------HARRPSLISK 286
GV AAG HS +G ++ +G+ ++ G+ H +++
Sbjct: 676 GVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTS 735
Query: 287 LPYSEE-----VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P S GG H+ L S G L+TWG N +G LG G
Sbjct: 736 NPVSAADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNG 777
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G + + PV E +LA G +H+L G ++A G N GQ
Sbjct: 649 WGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTSHSLAGRSDGTLWAWGNNTSGQ 708
Query: 103 LGISENIG----YSLEPLRISG--LKKEVVQ------IST-GYHHSSAITVDGELYMWGK 149
LG + G + +P + L V ++T G HS+A+ +G L+ WG+
Sbjct: 709 LGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLVATAGGSHSAALKSNGTLWTWGQ 768
Query: 150 NSNGQLGLGKKAAKVIP 166
N++GQLG G IP
Sbjct: 769 NTSGQLGNGTTTEADIP 785
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 247 (92.0 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 71/228 (31%), Positives = 114/228 (50%)
Query: 101 GQLGISENIGYSLEPLRISGLKKE-----VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG+ + P RI G + V ++ G H+ +T DG+++ G N +GQL
Sbjct: 14 GQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQL 73
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + I V S Q + G +V+VT G+V +WG+ G+LG ES
Sbjct: 74 GRGSRTEGSFSI-YPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLG--MES 130
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
T + TPR ++E+ + V++A+ G H +DE GRV+++G++A + +
Sbjct: 131 KF------TWQGTPRRVQEINDI-VQVAS-GSNHCIALDEGGRVFVWGEQADGRCI---- 178
Query: 276 NHARRP-SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
H P +S +P V+ G H L++ G ++TWG N +G LGI
Sbjct: 179 -HRPEPVEQLSGVPIVR-VLAGARHCLALSASGAVFTWGQNNSGELGI 224
Score = 215 (80.7 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 57/175 (32%), Positives = 92/175 (52%)
Query: 44 GNGDYG-RLGLGSLESRWRPVVC-SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G G G RL +++ R + + + ++ ++ CG HT+FLT+ G +++ G N G
Sbjct: 12 GEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDG 71
Query: 102 QLGI-SENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S G +S+ P+ + K ++QIS G H+ ++T DG ++ WG N +GQLG+
Sbjct: 72 QLGRGSRTEGSFSIYPVSWTSSAK-IIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMES 130
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
K P +V+ ++ I Q A G +A+ GG+V WG GR H E
Sbjct: 131 KFTWQ-GTPRRVQEINDIV--QVASGSNHCIALDEGGRVFVWGEQADGRCIHRPE 182
Score = 189 (71.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 70/274 (25%), Positives = 127/274 (46%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R FA WG+ ++G+LG+ S + W+ E + + +A G H + L E G V+ G
Sbjct: 114 RVFA--WGSNEHGQLGMES-KFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWG 170
Query: 97 LNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+ I + EP+ ++SG+ +V++ G H A++ G ++ WG+N++G+L
Sbjct: 171 EQADGRC-I-----HRPEPVEQLSGVP--IVRVLAGARHCLALSASGAVFTWGQNNSGEL 222
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+ + V + G+ +AA G +V +T G+ S+G+ G+ G G++
Sbjct: 223 GIDDLRPQTSV--QHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKV 280
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ T+ P + +L G V AAG H+ I + G Y FG + ++ +
Sbjct: 281 E-----KRTN---PTAVSDLIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKI 331
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
P +L + V G + T + S G +
Sbjct: 332 MTQSTPRKTDELDHVTGVFAGYHQTFFVRSSGTI 365
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 247 (92.0 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 71/228 (31%), Positives = 114/228 (50%)
Query: 101 GQLGISENIGYSLEPLRISGLKKE-----VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG+ + P RI G + V ++ G H+ +T DG+++ G N +GQL
Sbjct: 14 GQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDGQL 73
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + I V S Q + G +V+VT G+V +WG+ G+LG ES
Sbjct: 74 GRGSRTEGSFSI-YPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLG--MES 130
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
T + TPR ++E+ + V++A+ G H +DE GRV+++G++A + +
Sbjct: 131 KF------TWQGTPRRVQEINDI-VQVAS-GSNHCIALDEGGRVFVWGEQADGRCI---- 178
Query: 276 NHARRP-SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
H P +S +P V+ G H L++ G ++TWG N +G LGI
Sbjct: 179 -HRPEPVEQLSGVPIVR-VLAGARHCLALSASGAVFTWGQNNSGELGI 224
Score = 215 (80.7 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 57/175 (32%), Positives = 92/175 (52%)
Query: 44 GNGDYG-RLGLGSLESRWRPVVC-SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G G G RL +++ R + + + ++ ++ CG HT+FLT+ G +++ G N G
Sbjct: 12 GEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMDG 71
Query: 102 QLGI-SENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S G +S+ P+ + K ++QIS G H+ ++T DG ++ WG N +GQLG+
Sbjct: 72 QLGRGSRTEGSFSIYPVSWTSSAK-IIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMES 130
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
K P +V+ ++ I Q A G +A+ GG+V WG GR H E
Sbjct: 131 KFTWQ-GTPRRVQEINDIV--QVASGSNHCIALDEGGRVFVWGEQADGRCIHRPE 182
Score = 189 (71.6 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 70/274 (25%), Positives = 127/274 (46%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R FA WG+ ++G+LG+ S + W+ E + + +A G H + L E G V+ G
Sbjct: 114 RVFA--WGSNEHGQLGMES-KFTWQGTPRRVQEINDIVQVASGSNHCIALDEGGRVFVWG 170
Query: 97 LNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+ I + EP+ ++SG+ +V++ G H A++ G ++ WG+N++G+L
Sbjct: 171 EQADGRC-I-----HRPEPVEQLSGVP--IVRVLAGARHCLALSASGAVFTWGQNNSGEL 222
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+ + V + G+ +AA G +V +T G+ S+G+ G+ G G++
Sbjct: 223 GIDDLRPQTSV--QHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKV 280
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ T+ P + +L G V AAG H+ I + G Y FG + ++ +
Sbjct: 281 E-----KRTN---PTAVSDLIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKI 331
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
P +L + V G + T + S G +
Sbjct: 332 MTQSTPRKTDELDHVTGVFAGYHQTFFVRSSGTI 365
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 243 (90.6 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 79/285 (27%), Positives = 128/285 (44%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E + +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 372 GALLPGAVEQQ-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLG 430
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ +P + L E+VQ++ G H A++ + EL+ WG+ G+LGLG + +
Sbjct: 431 HG-GLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH 489
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--H---GQESSIL 218
P +V G ++ G + SV +T G+ L+ G+ +LG H G+E ++
Sbjct: 490 --SCPQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALH 547
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ +TP L+ + G HSA + +G Y FG ++ +
Sbjct: 548 QQVEEALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVS 607
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
R P + L + V CG T + + GE+Y+WG G LG
Sbjct: 608 RAPCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGARGRLG 652
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 72/271 (26%), Positives = 119/271 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG G L +P + A + + +ACG +H L L+ ++A G D G+
Sbjct: 421 FGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGR 480
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ +S P ++ +E ++ G S +TV G+ G N +LGL +
Sbjct: 481 LGLGTRESHSC-PQQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLS 539
Query: 162 AKVIP-IPTKVE-CLSGIFTKQAA------------LGFEQSVAVTGGGKVLSWGAGGSG 207
P + +VE L+ FT + LG S AVT G ++G+ G
Sbjct: 540 LGEEPALHQQVEEALN--FTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHG 597
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG R S P ++ L+G+K+ + A G + I G VY +G A
Sbjct: 598 QLGTNA--------RRVSR-APCQVQGLQGIKIAMVACGDAFTVAIGAEGEVYSWGKGAR 648
Query: 268 DKMLFQEGNHAR-RPSLISKL-PYS-EEVVC 295
++ ++ + A RP + + PY+ V C
Sbjct: 649 GRLGRRDEDAALPRPVQLDETQPYTVTSVSC 679
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 44/147 (29%), Positives = 71/147 (48%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVK 239
Q A G Q VT G+++ W A LG G + + G + ++ R ++ GV
Sbjct: 342 QVAAGRTQKAGVTRSGRLILWEAPP---LGAGGGALLPGAVEQQQPQFVSRFLEGQSGVT 398
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSE--EVVCG 296
+K A G L +AC+ + G + FG + + L G N +P+++ L E +V CG
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGS-NGCLGHGGLNDISQPTIVEALLGYEMVQVACG 457
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
H L++ EL+ WG + G LG+G
Sbjct: 458 ASHVLALSTERELFAWGRGDGGRLGLG 484
Score = 153 (58.9 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 58/216 (26%), Positives = 96/216 (44%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---LGKKAAKVIP--IPT 169
PLR+ L EVVQ++ G + +T G L +W G G L + P +
Sbjct: 330 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSR 389
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+E SG+ K A G + +T G ++++G+G +G LGHG G L S+ P
Sbjct: 390 FLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHG------G-LNDISQ--P 440
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP 288
+++ L G ++ A G H + ++ +G ++ L +H+ P + P
Sbjct: 441 TIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSC-PQQVPMPP 499
Query: 289 YSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
E V+CG + +LT G+ GSN LG+
Sbjct: 500 GQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGL 535
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 240 (89.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 80/267 (29%), Positives = 127/267 (47%)
Query: 78 CGGAHTLFLTETGCVYATGL---NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
C T +T+ GC + G +D G LG S++ + EP ++ E+ Q++TG H
Sbjct: 181 CSDNLTAAITDNGCCFTWGTFRCSD-GVLGYSDSQKRTAEPTQMR--LPEICQLATGTDH 237
Query: 135 SSAITVDGELYMWGKNSNGQLG---LGKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSV 190
A+T G++Y WG QLG L ++ + + P P L I + A G S
Sbjct: 238 IIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL---ALKNIISVGA--GSYHSF 292
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ G+V +WG + + G E G + + P L+ LEG VK G H+
Sbjct: 293 AIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITK----PTLVDALEGYNVKSITGGEHHT 348
Query: 251 ACIDENGRVYIFG----------DRAVDKMLFQE--GN--HARRPSLISKLPYSEEVVCG 296
+ E+GRV +G D A+ + + ++ GN + P++I L +VVCG
Sbjct: 349 LALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCG 408
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
+H +TS G++Y+WGS EN +G G
Sbjct: 409 THHNLAVTSDGKVYSWGSAENYEVGQG 435
Score = 214 (80.4 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 88/308 (28%), Positives = 141/308 (45%)
Query: 42 LWGNGDYGRLGLGSLESR--WRPVV--CSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
++G+G LG+G E +RP + + +K + LA GG H+ L+ G VY G+
Sbjct: 75 VFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGV 134
Query: 98 NDFGQLGI------SEN---IGYSL---EPLRISGLKKE--VVQISTGYHHSSAITVDGE 143
ND LG EN + L P ++ G V ++ + ++AIT +G
Sbjct: 135 NDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGC 194
Query: 144 LYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
+ WG + S+G LG + PT++ L I Q A G + +A+T GKV +W
Sbjct: 195 CFTWGTFRCSDGVLGYSDSQKRTAE-PTQMR-LPEIC--QLATGTDHIIALTTTGKVYTW 250
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G +LG R TP+ + L+ + + + A + HS ID GRVY
Sbjct: 251 GNGQQFQLGRRMLER-----RRLQGLTPQPLA-LKNI-ISVGAGSY-HSFAIDNKGRVYA 302
Query: 262 FG---DR--AVDKMLFQEGNHARRPSLISKLP-YSEEVVCGG-YHTCVLTSGGELYTWGS 314
+G R ++ +EG +P+L+ L Y+ + + GG +HT L G + WG
Sbjct: 303 WGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGR 362
Query: 315 NENGCLGI 322
++ LGI
Sbjct: 363 DDRHQLGI 370
Score = 164 (62.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 46/144 (31%), Positives = 71/144 (49%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----------- 109
+P + A E +++K++ G HTL L E G V A G +D QLGI +N
Sbjct: 326 KPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKG 385
Query: 110 -GYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV-IP 166
Y L P I GL V+Q+ G HH+ A+T DG++Y WG N ++G G V +P
Sbjct: 386 NNYYLSTPTIIPGLTN-VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVP 444
Query: 167 IPTKVECLSGIFTKQAALGFEQSV 190
+ + + + + A G + S+
Sbjct: 445 TLVRSKAIKEVAIRVAGAGGQFSI 468
Score = 151 (58.2 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 70/262 (26%), Positives = 110/262 (41%)
Query: 87 TETGCVYATGLNDFGQLGISE---NIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVD 141
TE VY G +LG+ E ++ Y L P+ +S K VV ++ G HS+A++ D
Sbjct: 68 TERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPI-LSTDKVGVVDLAVGGMHSAALSHD 126
Query: 142 GELYMWGKNSNGQLGLGKKAAK-----------VIPIPTKVE-CLSGIFTKQAALGFEQS 189
G +Y WG N + LG K K + P+KVE LS + + +
Sbjct: 127 GRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLT 186
Query: 190 VAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
A+T G +WG G LG+ + T+E T + E+ + A G
Sbjct: 187 AAITDNGCCFTWGTFRCSDGVLGYSDSQ------KRTAEPTQMRLPEICQL-----ATGT 235
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHA---RRPSLISKLPYS-EEVV---CGGYHT 300
H + G+VY +G+ FQ G RR ++ P + + ++ G YH+
Sbjct: 236 DHIIALTTTGKVYTWGNG----QQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHS 291
Query: 301 CVLTSGGELYTWGSNENGCLGI 322
+ + G +Y WG N GI
Sbjct: 292 FAIDNKGRVYAWGLNITRQCGI 313
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 209 (78.6 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 56/157 (35%), Positives = 83/157 (52%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQI 128
K + +++CG HTL LT +++ G N GQLGI EN+ S PL + L K V++I
Sbjct: 73 KRRVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGI-ENVVDSAVPLPVDTLSKFNVIKI 131
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI-PTKV--------ECLSGIFT 179
G + S+AIT G+LY WG ++ GQLG GK AK+ PT + E I+
Sbjct: 132 KAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQ 191
Query: 180 K----QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G + ++A++ G + SWG+ G+LG G
Sbjct: 192 NLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLG 228
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 41/122 (33%), Positives = 64/122 (52%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VV I+ G HS+ +T++G+L++WG N GQLG G + +P K L + + AL
Sbjct: 272 VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGS-LEFVKINRMAL 330
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++ +T V ++G+ +LGHG SI G R Y P I++ + + I A
Sbjct: 331 GNNHTILLTKEQDVFTFGSNEFYQLGHG---SIGGKNRL---YFPTQIQKPKVMASDIFA 384
Query: 245 AG 246
AG
Sbjct: 385 AG 386
Score = 141 (54.7 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 54/209 (25%), Positives = 98/209 (46%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+S G +HS+AI V+ E MWG+ +G+K + I K +S + GF
Sbjct: 37 QLSMGPNHSAAI-VNNECLMWGEV------MGRKHTTLFKIVWKRRVVS------VSCGF 83
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
++ +T K+ S G +G+LG + +S++ + + S++ IK V I
Sbjct: 84 NHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITE 143
Query: 245 AGFLH---SACIDE------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
AG L+ S+ + N +++ F + L + + + L Y+ +C
Sbjct: 144 AGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAE--KDDPIYQNLQYTN--IC 199
Query: 296 -GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT +++ G +++WGSN+ G LG+G
Sbjct: 200 FGAQHTIAISTTGAIFSWGSNQYGQLGLG 228
Score = 138 (53.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 48/187 (25%), Positives = 86/187 (45%)
Query: 1 MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW 60
++GR T + K K+ + + G + ++ + F+ G G+LG+ ++
Sbjct: 59 VMGRKHTTLFKIVWKRRV-VSVSCGFNHTLLLTSEYKIFSM--GFNQTGQLGIENVVDSA 115
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIG-YSLEPLRI 118
P+ K ++ + G + +TE G +Y G + +GQLG + N +S P I
Sbjct: 116 VPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTI 175
Query: 119 SG-----LKKE--VVQ------ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+K+ + Q I G H+ AI+ G ++ WG N GQLGLG AK++
Sbjct: 176 LNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLV 235
Query: 166 PIPTKVE 172
P+P ++
Sbjct: 236 PVPIHLD 242
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 46/164 (28%), Positives = 70/164 (42%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV------------ 171
+ I G H+ AI+ G ++ WG N GQLGLG AK++P+P +
Sbjct: 194 QYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHIN 253
Query: 172 ---ECLSGIFTKQA--------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
E ++ FT + A G S +T G + WG+ G+LG G
Sbjct: 254 SLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGD------- 306
Query: 221 LRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S + P+ +K LE VK+ A G H+ + + V+ FG
Sbjct: 307 --SLDQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVFTFG 348
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 43/154 (27%), Positives = 79/154 (51%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYH 133
+ACG H+ LT G ++ G N +GQLG +++ S+ P + G + ++ +++ G +
Sbjct: 275 IACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSV-PKTVKGSLEFVKINRMALGNN 333
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKV-IPIPTKVE----CLSGIFTK---QAALG 185
H+ +T + +++ +G N QLG G K + PT+++ S IF A
Sbjct: 334 HTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQKPKVMASDIFAAGDCSAYFV 393
Query: 186 FEQS---VAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ S + + G ++L+ GAGG+G G G S+
Sbjct: 394 LDDSPVHLNLLGQHQLLN-GAGGNG--GGGGSSN 424
Score = 95 (38.5 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ CG +H+ +LT G+L+ WGSN+ G LG G
Sbjct: 274 DIACGNFHSALLTLEGDLFLWGSNQYGQLGQG 305
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 240 (89.5 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 79/299 (26%), Positives = 134/299 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG+ G+LGL P + E +++++AC T +TE+G +Y G++
Sbjct: 316 WGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG--- 372
Query: 103 LGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G E G +IS G V+ ++ G H++ +T G+L+ +G + G LG G
Sbjct: 373 -GTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHG- 430
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV--TGG----------GKVLSWGAGGSG 207
+ + + P +VE L + + G + A+ T GK+ +WG G G
Sbjct: 431 -SLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKG 489
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
RLGH S + P + EL + +K++ G+ + + +G VY G
Sbjct: 490 RLGHAD---------SKRKLVPTCVTELIDHDFIKVSC-GWTLTVALSISGTVYTMGSSI 539
Query: 267 VDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ ++ L + +++ G +H VLTS G +YTWG NG LG+G
Sbjct: 540 HGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLG 598
Score = 208 (78.3 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 71/277 (25%), Positives = 129/277 (46%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + + +++++ G H +T G V+ G + G+LG+ NI P R+ L
Sbjct: 283 PKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDID-HPKRVESL 341
Query: 122 KKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFT 179
+ V+ ++ H + A+T GELY+WG + G +++ + K+ + L G T
Sbjct: 342 EDVAVRSVACSDHQTCAVTESGELYLWGIDG----GTIEQSGSQF-LTRKISDVLGGSLT 396
Query: 180 K-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G + VT G++ ++G+G G LGHG L S ++ P+ ++ L +
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGS-------LESVTK--PKEVESLRRM 447
Query: 239 KVKIAAAGFLHSACIDEN------------GRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
KV + G H+A I E G+++ +GD ++ + P+ +++
Sbjct: 448 KVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTE 507
Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
L + +V CG T L+ G +YT GS+ +G LG
Sbjct: 508 LIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLG 544
Score = 198 (74.8 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 49/151 (32%), Positives = 75/151 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG + + P + H ++CG T+ L+ +G VY G + GQ
Sbjct: 483 WGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQ 542
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S+ + + L ++ V+ I++G HH + +T G +Y WGK NGQLGLG
Sbjct: 543 LGCPRAKDKSVNVV-LGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVR 601
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ P+ VE L + A G + A+
Sbjct: 602 DRNSPV--LVEPLGDRLVESIACGLNLTAAI 630
Score = 192 (72.6 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 64/238 (26%), Positives = 106/238 (44%)
Query: 101 GQLGISENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G + S+N +L P L S +V IS G H++ +T GE++ WG ++G+LGL
Sbjct: 269 GLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGL-- 326
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K I P +VE L + + A Q+ AVT G++ WG G G ++S
Sbjct: 327 KVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG----GTIEQSG--- 379
Query: 220 FLRSTSEYTPRLIKELEGVKVKI--AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S++ R I ++ G + + A G H+A + +G+++ +G +
Sbjct: 380 -----SQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLES 434
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLT------------SGGELYTWGSNENGCLG 321
+P + L + V CG +HT + S G+L+TWG + G LG
Sbjct: 435 VTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLG 492
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 235 (87.8 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 74/260 (28%), Positives = 116/260 (44%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYH 133
A C H + L G Y G N+ GQLG + I P +SGL K ++V+ + G +
Sbjct: 62 ATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRD-RPTVVSGLSKHKIVKAAAGRN 120
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSV 190
H+ ++ DG+ +G N GQLGLG + + T + C+ A G + +V
Sbjct: 121 HTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTV 180
Query: 191 --AVTGGGKVLSWGAGGSGRLGHGQESSIL---GFLRSTSEYTPR--LIKELEGVKVKIA 243
+ T G +L+ G G+LGHG ++ +R E PR I L G +
Sbjct: 181 WLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKV 240
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI------SKLPYSEEVVCGG 297
A G H+ +D+NG VY +G ++ +E P I + LP + + G
Sbjct: 241 ACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGS 300
Query: 298 YHTCVLTSGGELYTWGSNEN 317
++ GG+LY WG +N
Sbjct: 301 ANSACTAGGGQLYMWGKIKN 320
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 65/231 (28%), Positives = 91/231 (39%)
Query: 110 GYSLEPLRISGLKKEVVQ-ISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
G + P R+ L ++ ++TG H A+ V+G Y WG+N GQLG G +
Sbjct: 42 GNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQR--D 99
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
PT V LS +AA G +V V+ G+ L +G G+LG G + GF+ E
Sbjct: 100 RPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKN--GFVSVEVE 157
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------DRAVDKMLFQEGNHAR 279
TP + V A F E + G D + + R
Sbjct: 158 STPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVR 217
Query: 280 -------RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
RP I+ L +V CG HT + G +YTWG G LG
Sbjct: 218 LAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLG 268
Score = 153 (58.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 67/244 (27%), Positives = 100/244 (40%)
Query: 30 WISSTLQRRFAALWGNGDYGRLGLGS--------------LESRWRPVVCSAFEKHSLKA 75
W+SST G YG+LG G+ E++ RP ++ ++
Sbjct: 181 WLSSTEGASILTA-GLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVK 239
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-----IST 130
+ACG HT+ + + G VY G +G+LG E P RI ++ V +S
Sbjct: 240 VACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKD-EWAPRRIDVFQRNNVLPPNAILSA 298
Query: 131 GYHHSSAITVDGELYMWGK-NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G +S+ G+LYMWGK +NG + P + LSG + G
Sbjct: 299 GSANSACTAGGGQLYMWGKIKNNGDDWM---------YPKPMMDLSGWNLRWMDSGSMHH 349
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
V +SWG G LG+G +S++ P+ + LEG+ V A GF H
Sbjct: 350 F-VGADSSCISWGHAQYGELGYGPNGQ-----KSSA--APKKVDMLEGMHVMGVACGFCH 401
Query: 250 SACI 253
S I
Sbjct: 402 SMVI 405
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 40/124 (32%), Positives = 60/124 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G + R RP V S KH + A G HT+ +++ G G N +GQ
Sbjct: 82 WGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQ 141
Query: 103 LGI-SENIGY-SLE----PLRISGLKKEVVQISTGYHHSSAIT-VDG-ELYMWGKNSNGQ 154
LG+ S G+ S+E PL + EV ++ G + ++ +G + G GQ
Sbjct: 142 LGLGSAKNGFVSVEVESTPLPCV-VSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQ 200
Query: 155 LGLG 158
LG G
Sbjct: 201 LGHG 204
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 235 (87.8 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 78/285 (27%), Positives = 125/285 (43%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E + +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 375 GALLPGAVEQQ-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLG 433
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
S +P + L E+VQ++ G H A++ + EL+ WG+ G+LGLG + +
Sbjct: 434 HGSLNDIS-QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH 492
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG-----GSGRLGHGQESSIL 218
P +V G ++ G + S+ +T G+ L+ G+ G RL G+E +
Sbjct: 493 --SCPQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPN 550
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ +TP + + G HSA + +G Y FG ++ +
Sbjct: 551 QQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVS 610
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
R P + L + V CG T + + GE+Y+WG G LG
Sbjct: 611 RAPCQVQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGRLG 655
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 73/269 (27%), Positives = 118/269 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG GSL +P + A + + +ACG +H L L+ ++A G D G+
Sbjct: 424 FGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGR 483
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ +S P ++S +E ++ G S +TV G G N +LGL + +
Sbjct: 484 LGLGTRESHSC-PQQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLS 542
Query: 162 AKVIPIPTKV--ECLS----GI--FTKQAAL----GFEQSVAVTGGGKVLSWGAGGSGRL 209
P P + E LS G F ++ L G S AVT G ++G+ G+L
Sbjct: 543 LGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQL 602
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G R S P ++ L+ +K+ + A G + + G VY +G A +
Sbjct: 603 GTNA--------RRVSR-APCQVQGLQNIKIAMVACGDAFTVAVGAEGEVYSWGKGARGR 653
Query: 270 M-LFQEGNHARRPSLISKL-PYS-EEVVC 295
+ E RP + ++ PY+ V C
Sbjct: 654 LGRRDEDAGLPRPVQLDEIHPYTVTSVSC 682
Score = 163 (62.4 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVK 239
Q A G Q VT G+++ W A LG G + + G + ++ R ++ GV
Sbjct: 345 QVAAGRTQKAGVTRSGRLILWEAPP---LGAGGGALLPGAVEQQQPQFVSRFLEGQSGVT 401
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
+K A G L +AC+ + G + FG + + N +P+++ L E +V CG
Sbjct: 402 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGA 461
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
H L++ EL+ WG + G LG+G
Sbjct: 462 SHVLALSTERELFAWGRGDGGRLGLG 487
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 59/216 (27%), Positives = 95/216 (43%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---LGKKAAKVIP--IPT 169
PLR+ L EVVQ++ G + +T G L +W G G L + P +
Sbjct: 333 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSR 392
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+E SG+ K A G + +T G ++++G+G +G LGHG L S+ P
Sbjct: 393 FLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGS-------LNDISQ--P 443
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP 288
+++ L G ++ A G H + ++ +G ++ L +H+ P +S P
Sbjct: 444 TIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSC-PQQVSMPP 502
Query: 289 YSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
E VVCG + +LT G GSN LG+
Sbjct: 503 GQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGL 538
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 156 (60.0 bits), Expect = 6.3e-18, Sum P(3) = 6.3e-18
Identities = 38/103 (36%), Positives = 56/103 (54%)
Query: 162 AKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A V P P + L+ + +Q LG E + + G+V SWGAG G+LGHG +
Sbjct: 145 AYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEA---- 200
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E PRL++ L+G+++ AAG HS C+ E G +YI+G
Sbjct: 201 -----ELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWG 238
Score = 134 (52.2 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ L+ETG +Y G N+ GQ
Sbjct: 185 WGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQ 244
Query: 103 LGI-----SENIGYSLEPLRIS--GLKKEVVQISTG 131
L + +EN E ++ GLK+E+ G
Sbjct: 245 LALPTRSGTENKAEREEATELNEDGLKEELAVADAG 280
Score = 124 (48.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
++ L G H L L G V++ G GQLG + LEP + L+ + +++ G
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG-TLEAELEPRLLEALQGLRMAKVAAG 221
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGL 157
HS ++ G++Y+WG N +GQL L
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLAL 247
Score = 111 (44.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V Q+ G H + G+++ WG +GQLG G A++ P +E L G+ + A
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEP--RLLEALQGLRMAKVAA 220
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRL 209
G SV ++ G + WG SG+L
Sbjct: 221 GGWHSVCLSETGDIYIWGWNESGQL 245
Score = 94 (38.1 bits), Expect = 6.3e-18, Sum P(3) = 6.3e-18
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ LP + V CG HT V+T GELYTWG + G LG
Sbjct: 292 PALLD-LPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLG 334
Score = 76 (31.8 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P P ++ G A+ G + VT G++ +WG G G+LGH +S+
Sbjct: 290 PFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSL 341
Score = 67 (28.6 bits), Expect = 6.3e-18, Sum P(3) = 6.3e-18
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 90 GCVYATGLNDFGQL---GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
G + G FGQ G S + YS EPL S ++ Q+S G+ +++ +T G + +
Sbjct: 7 GAWFGFGFCGFGQALGSGNSHHSVYSPEPLHASD---DICQVSAGWSYTALVTRGGRVEL 63
Query: 147 WGKNSNGQLG 156
G S G
Sbjct: 64 SGSVSGAADG 73
Score = 52 (23.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 17/78 (21%), Positives = 32/78 (41%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P L+ G +A+ G H+A + G +Y +G ++ ++ RP +
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFV 351
Query: 289 YSE----EVVCGGYHTCV 302
+ V CG ++T V
Sbjct: 352 ERQLEVRAVTCGPWNTYV 369
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 234 (87.4 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 67/198 (33%), Positives = 95/198 (47%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
ST + FA WG GD GRLGLG+ ES P + + + CG ++ LT G
Sbjct: 467 STERELFA--WGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQA 524
Query: 93 YATGLNDFGQLGISE-NIG------------YSLEPLRISGLKKE-VVQISTGYHHSSAI 138
A G N F +LG+ ++G + PL + L +E ++ + G HS +
Sbjct: 525 LACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLL 584
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
T G+ Y +G N +GQLG A +V P +V+ L GI A G +VA+ G+V
Sbjct: 585 TASGDCYTFGSNQHGQLGTN--ARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEV 642
Query: 199 LSWGAGGSGRLGHGQESS 216
SWG G GRLG E +
Sbjct: 643 FSWGKGARGRLGRKDEDA 660
Score = 215 (80.7 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 76/285 (26%), Positives = 123/285 (43%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 374 GALLPGAIEQP-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLG 432
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
S +P + L E+VQ++ G H A++ + EL+ WG+ G+LGLG + +
Sbjct: 433 HGSLNDIS-QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH 491
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSIL 218
P V G ++ G + S+ +T G+ L+ G+ +LG G+E +
Sbjct: 492 CCP--QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPH 549
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ +TP L+ + G HS + +G Y FG ++ +
Sbjct: 550 QQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVS 609
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
R P + L + V CG T + + GE+++WG G LG
Sbjct: 610 RAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG 654
Score = 172 (65.6 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 58/228 (25%), Positives = 95/228 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG GSL +P + A + + +ACG +H L L+ ++A G D G+
Sbjct: 423 FGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGR 482
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + L +E ++ G S +TV G+ G N +LGL +
Sbjct: 483 LGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSL 542
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQ----SVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
P P + + FT + +Q SV + +L +G G Q +
Sbjct: 543 GEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLG 602
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
R S P ++ L+G+K+ A G + I G V+ +G A
Sbjct: 603 TNARRVSR-APCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGA 649
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVK 239
Q A G Q VT G+++ W A LG G + + G + ++ R ++ GV
Sbjct: 344 QVAAGRTQKAGVTRSGRLILWEAPP---LGAGGGALLPGAIEQPQPQFVSRFLEGQSGVT 400
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
+K A G L +AC+ + G + FG + + N +P+++ L E +V CG
Sbjct: 401 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGA 460
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
H L++ EL+ WG + G LG+G
Sbjct: 461 SHVLALSTERELFAWGRGDGGRLGLG 486
Score = 163 (62.4 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 62/217 (28%), Positives = 95/217 (43%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI--PIPTKV- 171
PLR+ L EVVQ++ G + +T G L +W G G G I P P V
Sbjct: 332 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG-GALLPGAIEQPQPQFVS 390
Query: 172 ---ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
E SG+ K A G + +T G ++++G+G +G LGHG L S+
Sbjct: 391 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGS-------LNDISQ-- 441
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL 287
P +++ L G ++ A G H + ++ +G ++ L +H P L+
Sbjct: 442 PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCC-PQLVPMP 500
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P E VVCG + +LT G+ GSN LG+
Sbjct: 501 PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL 537
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 234 (87.4 bits), Expect = 9.2e-18, P = 9.2e-18
Identities = 79/291 (27%), Positives = 127/291 (43%)
Query: 40 AALWGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
A WG G +G+LGL +LE+ W+ P + + + + G T+ +T+ G + + G
Sbjct: 473 AYAWGEGTHGQLGLTALEA-WKHYPSRMESVRNYHVVSACAGDGFTILVTQAGSLLSCGS 531
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N LG E Y P I+ L V Q++ G H A++ +G +Y+WG ++ G LG
Sbjct: 532 NAHLALGQDEQRNYH-SPKLIARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALG 590
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG + P K+ LS + TK + + G + S + G++ G+ +LG +
Sbjct: 591 LGNYQQQQ-KFPQKI-LLSHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRS 648
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ I F + + KV A HS + E G VY G A + +
Sbjct: 649 AKITAFKKVQLPH-----------KVTQACFSSTHSVFLVEGGYVYTMGRNAEGQRGIRH 697
Query: 275 GNHARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N P+L+ K Y + C T V + + WG+ NG GIG
Sbjct: 698 CNSVDHPTLVDSVKSRYIVKANCSDQCTIVASEDNIITVWGTR-NGLPGIG 747
Score = 201 (75.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 60/218 (27%), Positives = 102/218 (46%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPT 169
+S+ P+++ K +V ++ H + DG Y WG+ ++GQLGL +A K P+
Sbjct: 441 FSMAPIQLPP-KAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWK--HYPS 497
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
++E + A G ++ VT G +LS G + L GQ+ + ++P
Sbjct: 498 RMESVRNYHVVSACAGDGFTILVTQAGSLLS--CGSNAHLALGQDEQ-------RNYHSP 548
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+LI L V+V+ AAG H + G VY++G + GN+ ++ K+
Sbjct: 549 KLIARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGL--GNYQQQQKFPQKILL 606
Query: 290 SE------EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
S ++ CG + VL + GEL+ GSN+ LG
Sbjct: 607 SHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLG 644
Score = 196 (74.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 67/251 (26%), Positives = 107/251 (42%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
+A +H + + E G YA G GQLG++ + P R+ ++ VV G
Sbjct: 457 VAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAGDGF 516
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ +T G L G SN L LG+ + P + L+ + +Q A G + +A++
Sbjct: 517 TILVTQAGSLLSCG--SNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALSR 574
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSAC 252
G V WG G LG LG + ++ +++ L VK K + G SA
Sbjct: 575 EGAVYVWGTSTCGALG-------LGNYQQQQKFPQKIL--LSHVKTKPSKIYCGPDTSAV 625
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC-GGYHTCVLTSGGELYT 311
+ NG +++ G +K+ FQ + +LP+ C H+ L GG +YT
Sbjct: 626 LFANGELHVCGSNDYNKLGFQRSAKITAFKKV-QLPHKVTQACFSSTHSVFLVEGGYVYT 684
Query: 312 WGSNENGCLGI 322
G N G GI
Sbjct: 685 MGRNAEGQRGI 695
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 163 (62.4 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 50/175 (28%), Positives = 82/175 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ L+ETG +Y G N+ GQ
Sbjct: 183 WGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQ 242
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + SL E + + G +S + DG G S G+ G
Sbjct: 243 LALPTK---SLA---------EDGKTTAG--EASGLEEDGSEVKRG--SAGEDGAPAPFI 286
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
V P P ++ G + + G + +T G++ +WG G G+LGH +++
Sbjct: 287 AVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTL 341
Score = 152 (58.6 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 33/84 (39%), Positives = 50/84 (59%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
++ LG E ++ + G+V SWGAG G+LGHG L + E PRL++ L+G++
Sbjct: 162 RRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGT-------LEAEPE--PRLLEALQGLR 212
Query: 240 VKIAAAGFLHSACIDENGRVYIFG 263
+ AAG HS C+ E G +YI+G
Sbjct: 213 MAEVAAGGWHSVCLSETGDIYIWG 236
Score = 120 (47.3 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGY 132
+ L G H L L G V++ G GQLG + EP + L+ + +++ G
Sbjct: 162 RRLELGAEHALLLDAAGQVFSWGAGRHGQLGHG-TLEAEPEPRLLEALQGLRMAEVAAGG 220
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKA 161
HS ++ G++Y+WG N +GQL L K+
Sbjct: 221 WHSVCLSETGDIYIWGWNESGQLALPTKS 249
Score = 119 (46.9 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 35/120 (29%), Positives = 59/120 (49%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G H+ + G+++ WG +GQLG G A+ P P +E L G+ + A G
Sbjct: 163 RLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAE--PEPRLLEALQGLRMAEVAAGG 220
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SV ++ G + WG SG+L +S + ++T+ L E +G +VK +AG
Sbjct: 221 WHSVCLSETGDIYIWGWNESGQLALPTKS-LAEDGKTTAGEASGL--EEDGSEVKRGSAG 277
Score = 104 (41.7 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 23/43 (53%), Positives = 27/43 (62%)
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ P SE +V CG HT VLT GELYTWG + G LG
Sbjct: 292 PALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLG 334
Score = 59 (25.8 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 90 GCVYATGLNDFGQL---GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
G + G FGQ G+ + +S EPLR G V ++S + +++ +T G + +
Sbjct: 7 GTWFGFGFCGFGQALGSGLGRQV-HSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRVQL 65
Query: 147 WG 148
G
Sbjct: 66 SG 67
Score = 49 (22.3 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV-LSWGAGGS 206
GLG++ P+ T L G+ A+ + + VT GG+V LS AGG+
Sbjct: 24 GLGRQVHSPEPLRTPGGSL-GVCRVSASWSY--TAFVTRGGRVQLSGAAGGT 72
Score = 46 (21.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS----LISKLPYSE 291
E VKV + G H+A + G +Y +G ++ ++ RP + K
Sbjct: 302 EAVKV---SCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVR 358
Query: 292 EVVCGGYHTCV 302
V CG ++T V
Sbjct: 359 TVSCGPWNTYV 369
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 210 (79.0 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 61/193 (31%), Positives = 100/193 (51%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGY 132
+A+ACG H L L+ +G + A G N FGQ G+ + + + L ++ G + +I+ G
Sbjct: 779 RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHS--FRIANLHQVDGDWPAIEKIACGQ 836
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSV 190
HS+ I DG L+ +G GQLG G + +PT+V +G+ K Q A G +V
Sbjct: 837 FHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRV---NGLICKVTQIACGRAHTV 893
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T G+VL G+G G++G + ++ +TP + L +V+ A + HS
Sbjct: 894 VLTDTGRVLVCGSGSYGQMGVDDD------IKKVFAFTPLPLGPL---RVRDIATHYYHS 944
Query: 251 ACIDENGRVYIFG 263
CI E+ RV+ +G
Sbjct: 945 ICITEDNRVFEWG 957
Score = 170 (64.9 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 46/164 (28%), Positives = 77/164 (46%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+ G+G R + + +++ +ACG H+ F+ G ++ G +GQ
Sbjct: 800 WGGNRFGQCGVGH-SFRIANLHQVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQ 858
Query: 103 LGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N L P R++GL +V QI+ G H+ +T G + + G S GQ+G+
Sbjct: 859 LGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDI 918
Query: 162 AKVI---PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
KV P+P L + + A + S+ +T +V WG
Sbjct: 919 KKVFAFTPLP-----LGPLRVRDIATHYYHSICITEDNRVFEWG 957
Score = 162 (62.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 41/116 (35%), Positives = 64/116 (55%)
Query: 41 ALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATG 96
+LW G G +G+LG G + +V + K +ACG AHT+ LT+TG V G
Sbjct: 847 SLWTFGWGVWGQLGHGGRNNS-NQLVPTRVNGLICKVTQIACGRAHTVVLTDTGRVLVCG 905
Query: 97 LNDFGQLGISENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+GQ+G+ ++I ++ PL + L+ V I+T Y+HS IT D ++ WG+N
Sbjct: 906 SGSYGQMGVDDDIKKVFAFTPLPLGPLR--VRDIATHYYHSICITEDNRVFEWGRN 959
Score = 130 (50.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
L +V ++ G HS+ IT +G LY WGK + QLG G K ++ P +V +G
Sbjct: 1020 LDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEP--HQVFEPNGAKWV 1077
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+LG ++A T G V +WG G+ G
Sbjct: 1078 NVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 35/94 (37%), Positives = 53/94 (56%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLN-DFGQLGISENIGYSLEPLRI---SGLKKEVVQ 127
++ ++ACG +H+ +T G +Y G D+ QLG N +EP ++ +G K V
Sbjct: 1023 NIVSVACGLSHSALITSEGTLYTWGKGLDY-QLGHG-NKNERMEPHQVFEPNGAKW--VN 1078
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKK 160
+S G +H+ A T DG ++ WGKN GQ G L KK
Sbjct: 1079 VSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKK 1112
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 45/194 (23%), Positives = 81/194 (41%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--KAAKVIPIPTKVECLSGIFTKQAALG 185
I+ G H ++ G+L WG N GQ G+G + A + + + I A G
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPAIEKI-----ACG 835
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S + G + ++G G G+LGHG ++ +++ P + L KV A
Sbjct: 836 QFHSAFICSDGSLWTFGWGVWGQLGHGGRNN-------SNQLVPTRVNGLI-CKVTQIAC 887
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----EEVVCGGYHTC 301
G H+ + + GRV + G + +M + ++ + LP ++ YH+
Sbjct: 888 GRAHTVVLTDTGRVLVCGSGSYGQMGVDDD--IKKVFAFTPLPLGPLRVRDIATHYYHSI 945
Query: 302 VLTSGGELYTWGSN 315
+T ++ WG N
Sbjct: 946 CITEDNRVFEWGRN 959
Score = 95 (38.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 31/98 (31%), Positives = 46/98 (46%)
Query: 230 RLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK 286
R +K L+G V +A G HSA I G +Y +G + +D L GN R P + +
Sbjct: 1014 REVKHFLDGNIVSVAC-GLSHSALITSEGTLYTWG-KGLDYQL-GHGNKNERMEPHQVFE 1070
Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ V G HT T G ++ WG N+ G G+
Sbjct: 1071 PNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 75 (31.5 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V CG H+ ++TS G LYTWG + LG G
Sbjct: 1027 VACGLSHSALITSEGTLYTWGKGLDYQLGHG 1057
Score = 75 (31.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G S +T G + +WG G +LGHG ++ + P + E G K
Sbjct: 1028 ACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERM---------EPHQVFEPNGAKWVN 1078
Query: 243 AAAGFLHSACIDENGRVYIFG 263
+ G H+ ++G V+ +G
Sbjct: 1079 VSLGNNHTIASTDDGSVFAWG 1099
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 187 (70.9 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 47/125 (37%), Positives = 79/125 (63%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E ++A A GG HT+ L+++G VY+ G ND G
Sbjct: 49 GQGDVGQLGLGENVMERKKPALVSIPED-VVQAEA-GGMHTVCLSKSGQVYSFGCNDEGA 106
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK------NSNGQL 155
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++ +L
Sbjct: 107 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRHCLFHTSQRL 165
Query: 156 GLGKK 160
G GK+
Sbjct: 166 GWGKE 170
Score = 168 (64.2 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 45/140 (32%), Positives = 67/140 (47%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 34 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 92
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 93 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 150
Query: 201 WGA------GGSGRLGHGQE 214
WG+ S RLG G+E
Sbjct: 151 WGSFRHCLFHTSQRLGWGKE 170
Score = 120 (47.3 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 41/131 (31%), Positives = 64/131 (48%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G VL+ G G G+LG G+ +++ P L+ E V V+ A AG +H+ C
Sbjct: 40 TEPGLVLTLGQGDVGQLGLGE--NVM------ERKKPALVSIPEDV-VQ-AEAGGMHTVC 89
Query: 253 IDENGRVYIFG---DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
+ ++G+VY FG + A+ + EG+ P + +V G HT LT G +
Sbjct: 90 LSKSGQVYSFGCNDEGALGRDTSVEGSEMV-PGKVELQEKVVQVSAGDSHTAALTDDGRV 148
Query: 310 YTWGSNENGCL 320
+ WGS + CL
Sbjct: 149 FLWGSFRH-CL 158
Score = 68 (29.0 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+V G H +LT+ G+LYT G E G LG
Sbjct: 212 KVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
Score = 65 (27.9 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
K++NG +GL + K + +P +V+ + + A G + V +T G + + G G G+
Sbjct: 183 KDNNGVIGLLEPMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQ 239
Query: 209 LGHGQE 214
LG E
Sbjct: 240 LGRVPE 245
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 169 (64.5 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 52/175 (29%), Positives = 84/175 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P V A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 188 WGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 247
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P R L ++ I TG + + DG + + G+ G
Sbjct: 248 LAL---------PAR--SLAEDGKTI-TG--DAPGLNEDGSEAK--RATEGEDGGPTPFI 291
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
V P P ++ G +A+ G + VT G++ +WG G G+LGH +S+
Sbjct: 292 AVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSL 346
Score = 144 (55.7 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 161 AAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+A V P P L+ ++ LG E ++ + G+V SWG G G+LGHG
Sbjct: 147 SAYVSPQPPFYRPLAPTLRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT------ 200
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L + E PR+++ L+G+ + AAG HS C+ E G +YI+G
Sbjct: 201 -LEAERE--PRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWG 241
Score = 114 (45.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGY 132
+ L G H L L G V++ G GQLG + EP + L+ + +++ G
Sbjct: 167 RRLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAEREPRVLEALQGLPMAEVAAGG 225
Query: 133 HHSSAITVDGELYMWGKNSNGQLGL 157
HS ++ G++Y+WG N +GQL L
Sbjct: 226 WHSVCVSETGDIYIWGWNESGQLAL 250
Score = 108 (43.1 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G H+ + G+++ WG +GQLG G A+ P +E L G+ + A G
Sbjct: 168 RLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAE--REPRVLEALQGLPMAEVAAGG 225
Query: 187 EQSVAVTGGGKVLSWGAGGSGRL 209
SV V+ G + WG SG+L
Sbjct: 226 WHSVCVSETGDIYIWGWNESGQL 248
Score = 96 (38.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
Y P L L ++++ A H+ +D G+V+ +G ++ R P ++
Sbjct: 157 YRP-LAPTLRARRLELGAE---HALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEA 212
Query: 287 L---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
L P +E V GG+H+ ++ G++Y WG NE+G L +
Sbjct: 213 LQGLPMAE-VAAGGWHSVCVSETGDIYIWGWNESGQLAL 250
Score = 94 (38.1 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ LP + V CG HT V+T GELYTWG + G LG
Sbjct: 297 PALLD-LPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 339
Score = 75 (31.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 22/69 (31%), Positives = 33/69 (47%)
Query: 90 GCVYATGLNDFGQ-LGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
G + G FGQ LG YS EPL + G +V ++S + +++ +T G L +
Sbjct: 7 GAWFGFGFCGFGQALGSGRGRQVYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRLELS 66
Query: 148 GKNSNGQLG 156
G S G G
Sbjct: 67 GSVS-GSAG 74
Score = 57 (25.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 26/120 (21%), Positives = 46/120 (38%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
E +TG L+ + R G++ F+ + + L L VK A+ G
Sbjct: 257 EDGKTITGDAPGLNEDGSEAKRATEGEDGGPTPFI-AVQPFPALLDLPLGSDAVK-ASCG 314
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS----LISKLPYSEEVVCGGYHTCV 302
H+A + G +Y +G ++ ++ RP + K V CG ++T V
Sbjct: 315 SRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRTVSCGPWNTYV 374
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 183 (69.5 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 51/160 (31%), Positives = 83/160 (51%)
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVY--ATGLNDFGQL---GISENIGYSL-EPLRI 118
C K + +A G H + T +G V+ TGL G+ G + + ++ EP R+
Sbjct: 11 CHMLHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRV 70
Query: 119 SGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+GL+ + + + G HS+++T GE+Y+WG N +GQL +AA +P+P K+E
Sbjct: 71 TGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA--NEAA-FLPVPQKIEAHCFQ 127
Query: 178 FTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
K A+ G+ VA T GK+ +WG G+LG E+
Sbjct: 128 NEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLET 167
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 47/173 (27%), Positives = 72/173 (41%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG- 120
P + E + G H+ LT+ G VY G N GQL + + P +I
Sbjct: 67 PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL--ANEAAFLPVPQKIEAH 124
Query: 121 --LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL------GKKAAK---VIPI-- 167
++V I +G+ H A T G+++ WG+ GQLG G K K +P
Sbjct: 125 CFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSR 184
Query: 168 -PTKVECLSGIFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P + T + + G E ++A+ GG SWG G G G E+++
Sbjct: 185 PPNSMPSSPHCLTGATEVSCGSEHNLAIIGG-VCYSWGWNEHGMCGDGTEANV 236
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/146 (31%), Positives = 59/146 (40%)
Query: 183 ALGFEQSVAVTGGGKVLSWGAG--GSGR-LGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G +VA T G V WG G GR L GQ L + E P + LE K
Sbjct: 23 AAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQT---LPLFFTAKE--PSRVTGLENSK 77
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---- 295
AG HSA + + G VY++G + L E P I + E V
Sbjct: 78 AMCVLAGSDHSASLTDAGEVYVWGSNKHGQ-LANEAAFLPVPQKIEAHCFQNEKVTAIWS 136
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLG 321
G H T G+++TWG + G LG
Sbjct: 137 GWTHLVAQTETGKMFTWGRADYGQLG 162
Score = 77 (32.2 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
PS L + EV CG H + GG Y+WG NE+G G G
Sbjct: 190 PSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWNEHGMCGDG 231
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 228 (85.3 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 77/279 (27%), Positives = 125/279 (44%)
Query: 54 GSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI 109
G++E + +P S F E S +K+++CG T LT+ G + G G LG N
Sbjct: 378 GAVE-QMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHG-NF 435
Query: 110 GYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
+P + L E+VQ+S G H A+T + E++ WG+ NG+LGL + + P
Sbjct: 436 NDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSH--NCP 493
Query: 169 TKVECLSGIFTKQAAL-GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI---LGFLRST 224
+V L F Q L G + S+ ++ ++L+ G +LG + S F +
Sbjct: 494 QQVS-LPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVE 552
Query: 225 SEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ +L++ L K+ G HS + E G+ + FG ++ +R P
Sbjct: 553 EVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPY 612
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+S L CG T + + GE+YTWG G LG
Sbjct: 613 QVSGLQGITMAACGDAFTLAIGAEGEVYTWGKGARGRLG 651
Score = 193 (73.0 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 56/186 (30%), Positives = 89/186 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLGL + +S P S + + CG ++ ++ + A G N F +
Sbjct: 474 WGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNK 533
Query: 103 LGISENIGYS-------LEPLRISGL-------KKEVVQISTGYHHSSAITVDGELYMWG 148
LG+ + G +E + + L +++V I G HS A+T G+ + +G
Sbjct: 534 LGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFG 593
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N +GQLG + + +P +V L GI AA G ++A+ G+V +WG G GR
Sbjct: 594 SNQHGQLGCSHRRSSRVPY--QVSGLQGI--TMAACGDAFTLAIGAEGEVYTWGKGARGR 649
Query: 209 LGHGQE 214
LG +E
Sbjct: 650 LGRKEE 655
Score = 161 (61.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 39/145 (26%), Positives = 72/145 (49%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVK 239
Q +LG Q + VT G++++W A +G G E ++ G + ++ R ++ GV
Sbjct: 344 QVSLGRTQKMGVTKSGRLITWEAPS---VGSG-EPTLPGAVEQMQPQFISRFLEGQSGVT 399
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
+K + G L + C+ + G + FG + + N +P ++ L E +V CG
Sbjct: 400 IKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGA 459
Query: 298 YHTCVLTSGGELYTWGSNENGCLGI 322
H +T+ E+++WG +NG LG+
Sbjct: 460 SHVLAVTNEREVFSWGRGDNGRLGL 484
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 62/237 (26%), Positives = 103/237 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG G+ +P + A + L ++CG +H L +T V++ G D G+
Sbjct: 422 FGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGR 481
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG++ ++ P ++S E ++ G S ++ ++ G N +LGL K +
Sbjct: 482 LGLATQDSHNC-PQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVS 540
Query: 162 AKVIPIP-TKVECLSGIFTKQAA-----------LGFEQSVAVTGGGKVLSWGAGGSGRL 209
P +VE + Q+A +G SVAVT G+ ++G+
Sbjct: 541 GTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQ---- 596
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
HGQ LG S P + L+G+ + AA G + I G VY +G A
Sbjct: 597 -HGQ----LGCSHRRSSRVPYQVSGLQGITM--AACGDAFTLAIGAEGEVYTWGKGA 646
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 226 (84.6 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 67/198 (33%), Positives = 92/198 (46%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
ST + FA WG GD GRLGLG+ ES P + + CG ++ LT G
Sbjct: 459 STERELFA--WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQA 516
Query: 93 YATGLNDFGQLGISE-NIGYSLEP------------LRISGLKKE-VVQISTGYHHSSAI 138
A G N F +LG+ ++G P L + L +E ++ I G HS+A+
Sbjct: 517 LACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAV 576
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
T G+ Y +G N +GQLG + P KV+ L GI A G +VA+ +V
Sbjct: 577 TASGDCYTFGSNQHGQLGTNTRRGS--RAPCKVQGLEGIKMAMVACGDAFTVAIGAESEV 634
Query: 199 LSWGAGGSGRLGHGQESS 216
SWG G GRLG E +
Sbjct: 635 YSWGKGARGRLGRRDEDA 652
Score = 217 (81.4 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 77/285 (27%), Positives = 124/285 (43%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 366 GSLLPGAVEQP-QPQFISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLG 424
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
S +P + L E+VQ++ G H A++ + EL+ WG+ +G+LGLG + +
Sbjct: 425 HGSLTDIS-QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESH 483
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--H---GQESSIL 218
P +V G ++ G + S+ +T G+ L+ G+ +LG H G+E
Sbjct: 484 --SCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPH 541
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ +T L+ + G HSA + +G Y FG ++ +
Sbjct: 542 QQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGS 601
Query: 279 RRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
R P + L + V CG T + + E+Y+WG G LG
Sbjct: 602 RAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGKGARGRLG 646
Score = 180 (68.4 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 69/254 (27%), Positives = 108/254 (42%)
Query: 27 CKRWISSTL-QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C + ++ L R +G+G G LG GSL +P + A + + +ACG +H L
Sbjct: 398 CGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLA 457
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL 144
L+ ++A G D G+LG+ +S P ++ +E ++ G S +TV G+
Sbjct: 458 LSTERELFAWGRGDSGRLGLGTRESHSC-PQQVPMPPGQEAQRVVCGIDSSMILTVPGQA 516
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAAL----------GFEQSVAV 192
G N +LGL + P+P + E LS A L G S AV
Sbjct: 517 LACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAV 576
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G ++G+ G+LG R S P ++ LEG+K+ + A G +
Sbjct: 577 TASGDCYTFGSNQHGQLGTNT--------RRGSR-APCKVQGLEGIKMAMVACGDAFTVA 627
Query: 253 IDENGRVYIFGDRA 266
I VY +G A
Sbjct: 628 IGAESEVYSWGKGA 641
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 59/217 (27%), Positives = 96/217 (44%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI--PIPTKV- 171
PLR+ L EVVQ++ G + +T G L +W G G G + P P +
Sbjct: 324 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG-GSLLPGAVEQPQPQFIS 382
Query: 172 ---ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
E SG+ K A G + +T G ++++G+G +G LGHG + I S+
Sbjct: 383 RFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDI-------SQ-- 433
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL 287
P +++ L G ++ A G H + ++ +G ++ L +H+ P +
Sbjct: 434 PTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSC-PQQVPMP 492
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P E VVCG + +LT G+ GSN LG+
Sbjct: 493 PGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL 529
Score = 156 (60.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 41/146 (28%), Positives = 68/146 (46%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVK 239
Q A G Q VT G+++ W A LG G S + G + ++ R ++ GV
Sbjct: 336 QVAAGRTQKAGVTRSGRLILWEAPP---LGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
+K A G +AC+ + G + FG + + +P+++ L E +V CG
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGA 452
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
H L++ EL+ WG ++G LG+G
Sbjct: 453 SHVLALSTERELFAWGRGDSGRLGLG 478
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 221 (82.9 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 84/310 (27%), Positives = 130/310 (41%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LGL E +C+A ++ +ACG T+ L G V + G N FGQL
Sbjct: 55 GHNKAGQLGLNHTEDVLCFTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNAFGQL 114
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA-- 161
G+ + G L P +I LK++ V I+ G H+ A T G ++ WG G K+
Sbjct: 115 GVPQISGPCLIPQKIKSLKEKAVGIAAGLRHALAATESGLVFQWG---TGMASRAKRVHQ 171
Query: 162 AKVIPI------PTKVECLSGIFTKQAALG-FEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
K +P+ P +++ G+ Q +L + S++ G G + WG+ HGQ
Sbjct: 172 GKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNK-----HGQL 226
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S FL + + K+ +G+ H E G+V+ +G RA D Q
Sbjct: 227 VSKEVFLVEPKKIDTQFFSH---EKIGAVWSGWTHLVAQTETGKVFTWG-RA-D--YGQL 279
Query: 275 GNHA---------RRPSLISKLPYSE------------EVVCGGYHTCVLTSGGELYTWG 313
G HA + S + P E ++ CG H + G +WG
Sbjct: 280 GRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIACGSEHNLAVV-GDCCLSWG 338
Query: 314 SNENGCLGIG 323
NE+G G G
Sbjct: 339 WNEHGMCGDG 348
Score = 217 (81.4 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 77/287 (26%), Positives = 131/287 (45%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCS--AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G YG+LGLG E P + + + +K++A GG H+ +T G ++ G N G
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 60
Query: 102 QLGIS--ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG++ E++ +SG V +++ G+ + + G + G N+ GQLG+ +
Sbjct: 61 QLGLNHTEDVLCFTLCTALSGFC--VQEVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQ 118
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + IP K++ L AA G ++A T G V WG G + R + L
Sbjct: 119 ISGPCL-IPQKIKSLKEKAVGIAA-GLRHALAATESGLVFQWGTGMASRAKRVHQGKTLP 176
Query: 220 FLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ E P IK GV + +++ + +L S G +Y++G +++ +E
Sbjct: 177 VFWAAKE--PCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQLVSKEV-FL 233
Query: 279 RRPSLISKLPYSEE---VVCGGY-HTCVLTSGGELYTWGSNENGCLG 321
P I +S E V G+ H T G+++TWG + G LG
Sbjct: 234 VEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLG 280
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 50/180 (27%), Positives = 82/180 (45%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYM 146
G +Y G N GQL +S+ + + +EP +I +++ + +G+ H A T G+++
Sbjct: 213 GHLYVWGSNKHGQL-VSKEV-FLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFT 270
Query: 147 WGKNSNGQLGLGKK---AAKVIPIPTKVECL-------SG---IFTKQAALGFEQSVAVT 193
WG+ GQLG A +VI + + + C +G I Q A G E ++AV
Sbjct: 271 WGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIACGSEHNLAVV 330
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G LSWG G G G E+++ + P+ +K L K + G HS +
Sbjct: 331 GDC-CLSWGWNEHGMCGDGTEANV---------HVPKPVKALGYAKQILIGCGAGHSLAL 380
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 224 (83.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 74/233 (31%), Positives = 106/233 (45%)
Query: 43 WGN--GDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG + G LG + + + P + +K +K L CG H L L + G V + G
Sbjct: 255 WGTFRSNDGILGFDAKTKVQTTPKLLPDLKK--IKHLVCGDNHVLALNDKGAVLSWGSGQ 312
Query: 100 FGQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
QLG I N L+P R GL K +V I G HS A+ G+++ WG NS G+ G
Sbjct: 313 QNQLGRRIIERNKLNGLQP-REFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSFGETG 371
Query: 157 LGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ + A I PT V+ LS Q G S+A T G+ L WG + G
Sbjct: 372 IRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKI 431
Query: 214 ESSILGFLRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++ + PR++ E + G+K K AAG HS ID +GR + +G
Sbjct: 432 DTLPDDAVIKDERDRPRILIEPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWG 484
Score = 204 (76.9 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 60/195 (30%), Positives = 90/195 (46%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+G +LG +E ++ + F + + G H+ + ++G V+A GLN F
Sbjct: 308 WGSGQQNQLGRRIIERNKLNGLQPREFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLNSF 367
Query: 101 GQLGISENIGYS----LEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+ GI EN G S + P + L KK V QI G HHS A T DGE +WG+ Q
Sbjct: 368 GETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQT 427
Query: 156 GLG-------------KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
GL + +++ PT V GI K A G + S+A+ G+ SWG
Sbjct: 428 GLKIDTLPDDAVIKDERDRPRILIEPTAVP---GIKAKAVAAGSDHSIAIDTSGRPWSWG 484
Query: 203 AGGSGRLGHGQESSI 217
+ + G G + +
Sbjct: 485 FSATYQTGQGTQDDV 499
Score = 168 (64.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 58/199 (29%), Positives = 95/199 (47%)
Query: 125 VVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+V+++ G S A+T +G++Y WG ++++G LG K KV P + L I K
Sbjct: 233 IVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKT-KVQTTPKLLPDLKKI--KHL 289
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVK 241
G +A+ G VLSWG+G +LG E + L L+ PR +G+ V
Sbjct: 290 VCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQ------PREFGLPKGI-VH 342
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHAR--RPSLISKLPYSEEV-VC 295
I A F HS + ++G+V+ +G + + +E + A P+++ L +C
Sbjct: 343 IGAGAF-HSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQIC 401
Query: 296 GG-YHTCVLTSGGELYTWG 313
GG +H+ T GE WG
Sbjct: 402 GGAHHSIAATQDGECLVWG 420
Score = 111 (44.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 39/153 (25%), Positives = 65/153 (42%)
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKE 234
G + A G S A+T G+V WG S ILGF T + TP+L+ +
Sbjct: 230 GTVIVEVAAGDSSSFALTDEGQVYGWGTFRSN-------DGILGFDAKTKVQTTPKLLPD 282
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGD---RAVDKMLFQEGN-HARRPSLISKLPYS 290
L+ K+K G H +++ G V +G + + + + + +P LP
Sbjct: 283 LK--KIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFG-LPKG 339
Query: 291 -EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ G +H+ + G+++ WG N G GI
Sbjct: 340 IVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGI 372
Score = 96 (38.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 31/102 (30%), Positives = 45/102 (44%)
Query: 226 EYTPRLIKEL---EGVKVKIAAAGFLHSACIDENGRVYIFGD-RAVDKML-FQEGNHARR 280
E TP I G + AAG S + + G+VY +G R+ D +L F +
Sbjct: 216 ECTPTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQT 275
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P L+ L + +VCG H L G + +WGS + LG
Sbjct: 276 TPKLLPDLKKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLG 317
Score = 90 (36.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/80 (35%), Positives = 40/80 (50%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECL--SGIFTKQAALGFEQSV 190
++A T +Y+ G+ S+G+LGLG VI + P L + Q A+G V
Sbjct: 103 NNAPTAKLNVYVCGEGSSGELGLGV-GKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCV 161
Query: 191 AVTGGGKVLSWGAGGSGRLG 210
A+T KVL+WG G LG
Sbjct: 162 ALTHDNKVLTWGVNDQGALG 181
Score = 80 (33.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 92 VYATGLNDFGQLG--ISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGELYM 146
VY G G+LG + +N+ P L + VVQ++ G H A+T D ++
Sbjct: 112 VYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVLT 171
Query: 147 WGKNSNGQLG 156
WG N G LG
Sbjct: 172 WGVNDQGALG 181
Score = 63 (27.2 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 22/66 (33%), Positives = 30/66 (45%)
Query: 44 GNGDYGRLGLG---SLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLN 98
G G G LGLG ++ RP + + + +A GG H + LT V G+N
Sbjct: 116 GEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHDNKVLTWGVN 175
Query: 99 DFGQLG 104
D G LG
Sbjct: 176 DQGALG 181
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 223 (83.6 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 87/293 (29%), Positives = 132/293 (45%)
Query: 44 GNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GNGD G+LGLG LE + V + + A GG H L LT++G +Y+ G ND G
Sbjct: 48 GNGDVGQLGLGEDILERKRLSPVAGIPDAVDISA---GGMHNLVLTKSGDIYSFGCNDEG 104
Query: 102 QLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGL 157
LG SE+ G +P I L + + IS G HS+ + DG ++ WG ++S+G +GL
Sbjct: 105 ALGRDTSED-GSESKPDLID-LPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGL 162
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
K PI + + G A G + V +T GKV + G G+LG E SI
Sbjct: 163 TIDGNKRTPI----DLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSI 218
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC-IDENGRVYIFGDRAVDKMLFQEGN 276
G R R +L + K A + + C + + ++ F++
Sbjct: 219 SGEGRRGKRDLLRPT-QLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNN--FKQLA 275
Query: 277 HARRPSLISKLPYSEEV-----VCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
H + + P E+ + GG +HT +LT+ + G E G LG+G
Sbjct: 276 HETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLG 328
Score = 144 (55.7 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 56/185 (30%), Positives = 82/185 (44%)
Query: 87 TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGEL 144
T G V G D GQLG+ E+I LE R+S + + V IS G H+ +T G++
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGEDI---LERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 145 YMWGKNSNGQLGL-----GKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
Y +G N G LG G ++ +I +P K C+S G S + G+V
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISA--------GDSHSACLLEDGRV 147
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+WG S R HG +G ++ TP I +EG A+G H + G+
Sbjct: 148 FAWG---SFRDSHGN----MGLTIDGNKRTP--IDLMEGTVCCSIASGADHLVILTTAGK 198
Query: 259 VYIFG 263
V+ G
Sbjct: 199 VFTVG 203
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
E ++ +A G HT+ LT G ++G+LG+ + +P + L +++V +
Sbjct: 291 ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSV 350
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
G S A+T+DG+LY WG N QLG+G ++ PI
Sbjct: 351 GCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPI 389
Score = 115 (45.5 bits), Expect = 0.00094, P = 0.00094
Identities = 69/300 (23%), Positives = 132/300 (44%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL--N 98
+G D G LG + E S +P + K +L ++ G +H+ L E G V+A G +
Sbjct: 98 FGCNDEGALGRDTSEDGSESKPDLIDLPGK-AL-CISAGDSHSACLLEDGRVFAWGSFRD 155
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G +G++ + G P+ + ++ V I++G H +T G+++ G GQLG
Sbjct: 156 SHGNMGLTID-GNKRTPIDL--MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGR 212
Query: 158 ---------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G++ + + PT++ ++ +A + + W G
Sbjct: 213 LSERSISGEGRRGKRDLLRPTQL-IITRAKPFEAIWATNYCTFMRESQTQVIWATG---- 267
Query: 209 LGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
L + ++ L E+ IK EL+ ++ A G H+ + + + + G
Sbjct: 268 LNNFKQ---LAHETKGKEFALTPIKTELKDIRH--IAGGQHHTVILTTDLKCSVVGRPEY 322
Query: 268 DKM-LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + +P+++ KL +E++V CG + +T G+LY+WGS N LG+G
Sbjct: 323 GRLGLGDVKDVVEKPTIVKKL--TEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVG 380
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 196 (74.1 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 45/151 (29%), Positives = 73/151 (48%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
V C +K +ACGG H+ +T+TG + G +GQ G + L P +S L
Sbjct: 303 VQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCG-QGSTDDELSPTCVSSLL 361
Query: 123 K-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ +++ G H++ + DG++Y +G N GQLG G A+ +P + L + K
Sbjct: 362 GIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKT 421
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ G + +T G+V WG G+LG G
Sbjct: 422 ISCGARHTAVITDEGRVFCWGWNKYGQLGIG 452
Score = 191 (72.3 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 51/173 (29%), Positives = 81/173 (46%)
Query: 158 GKKAAKVIPIPTKVEC--LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
GK + + + + V+C + G + K+ A G S +T G +L++G G G+ G G
Sbjct: 290 GKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGS-- 347
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ E +P + L G++++ AAG H+ C +G VY FG ++
Sbjct: 348 -------TDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCD 400
Query: 276 NHARRPSLISKLPYSEEV-----VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L+ + P E V CG HT V+T G ++ WG N+ G LGIG
Sbjct: 401 QAETLPKLL-EAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIG 452
Score = 174 (66.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 49/147 (33%), Positives = 71/147 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G YG+ G GS + P S+ ++ +A G HT + G VYA G N FGQ
Sbjct: 335 FGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQ 394
Query: 103 LGISENIGYSLEPL-RISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + +L L L+ V IS G H++ IT +G ++ WG N GQLG+G
Sbjct: 395 LGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDV 454
Query: 161 AAKVIPIPTKV-ECLSGIFTKQAALGF 186
+ P ++ +C F K A G+
Sbjct: 455 IDRNAPAEVRIKDC----FPKNIACGW 477
Score = 165 (63.1 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 52/182 (28%), Positives = 85/182 (46%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V +I+ G HS+ IT G L +G GQ G G ++ P T V L GI ++ A
Sbjct: 313 VKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSP--TCVSSLLGIRIEEVAA 370
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVKI 242
G + + G V ++G G+LG G + + E P+L++ LE V VK
Sbjct: 371 GLWHTTCASSDGDVYAFGGNQFGQLGTGCDQA---------ETLPKLLEAPNLENVNVKT 421
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPYSEEVVCGGYHTC 301
+ G H+A I + GRV+ +G ++ + P+ + K + + + CG +HT
Sbjct: 422 ISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIKDCFPKNIACGWWHTL 481
Query: 302 VL 303
+L
Sbjct: 482 LL 483
Score = 152 (58.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 50/177 (28%), Positives = 84/177 (47%)
Query: 106 SENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
S+NI S P +S G++ +V ++ G H+ A++ G+++ WG GQLGLG +
Sbjct: 216 SDNIDLSALPCLVSLAPGVR--IVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRV- 272
Query: 163 KVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVL-SW----GAGGSGRLGHGQESS 216
+++ P + C+ + K + G S +V G+VL S+ GG +
Sbjct: 273 RLVSSPHPIPCIEPSSYGKATSSGVNMS-SVVQCGRVLGSYVKKIACGGRHSAVITDTGA 331
Query: 217 ILGF---------LRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+L F ST E +P + L G++++ AAG H+ C +G VY FG
Sbjct: 332 LLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFG 388
Score = 73 (30.8 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV--QISTGY 132
++A GG HTL L++ G V+ G GQLG+ + P I ++ S+G
Sbjct: 238 SVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSSGV 297
Query: 133 HHSSAI 138
+ SS +
Sbjct: 298 NMSSVV 303
Score = 55 (24.4 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G G+LGLGS L S P+ C E S G + + + G V
Sbjct: 258 WGYGGEGQLGLGSRVRLVSSPHPIPC--IEPSSYGKATSSGVNMSSVVQCGRV 308
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 185 (70.2 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 51/175 (29%), Positives = 85/175 (48%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG GSLE+ P + A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 119 WGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQ 178
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P R L ++ I +S + DG + + + G+ G
Sbjct: 179 LAL---------PSR--SLAEDTKTIP---REASGLNEDG--FEVRRTAKGEDGAPAPFI 222
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P P ++ G +A+ G + VTG G++ +WG G G+LGH +S+
Sbjct: 223 AIQPFPALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSL 277
Score = 162 (62.1 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 54/178 (30%), Positives = 83/178 (46%)
Query: 90 GCVYATGLNDFGQL---GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
G + G FGQ G + S EPL+ G +V ++S + +++ +T E
Sbjct: 7 GSWFGFGFCGFGQAPGSGRGRQV-LSPEPLQTPGSGADVRRVSASWSYTALVT--RERPP 63
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
G G KA + P L+ + ++ LG E ++ + G+V SWG G
Sbjct: 64 PALLRPGPRVPGAKAPQPALRPPAPRALAPELRARRLELGAEHALLLDEAGQVFSWGQGR 123
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG L + E PRL++ L+G+ V AAG HS C+ E G +YI+G
Sbjct: 124 HGQLGHGS-------LEAEPE--PRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWG 172
Score = 129 (50.5 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGY 132
+ L G H L L E G V++ G GQLG ++ EP + L+ V +++ G
Sbjct: 98 RRLELGAEHALLLDEAGQVFSWGQGRHGQLGHG-SLEAEPEPRLLEALQGLPVAEVAAGG 156
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKK--AAKVIPIPTKVECLS--GIFTKQAALG 185
HS ++ G++Y+WG N +GQL L + A IP + L+ G ++ A G
Sbjct: 157 WHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGLNEDGFEVRRTAKG 213
Score = 98 (39.6 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ LP +VV CG HT V+T GELYTWG + G LG
Sbjct: 228 PALLD-LPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLG 270
Score = 51 (23.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/78 (24%), Positives = 32/78 (41%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS----LI 284
P L+ G V A+ G H+A + G +Y +G ++ ++ RP +
Sbjct: 228 PALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFV 287
Query: 285 SKLPYSEEVVCGGYHTCV 302
K V CG ++T V
Sbjct: 288 DKQLQVRAVSCGPWNTYV 305
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 221 (82.9 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 67/261 (25%), Positives = 116/261 (44%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++K ++CG T LT+ G + G G LG S + + L E+VQ++ G
Sbjct: 398 TIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACG 457
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFE 187
H A++ + E++ WG+ NG+LGLG + + + +P + E ++ G +
Sbjct: 458 ASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEA------QRVICGID 511
Query: 188 QSVAVTGGGKVLSWGAG-----GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
S+ +T ++L+ G+ G R+ +E S + + +T L V
Sbjct: 512 SSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVC 571
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHT 300
A G HSA + +G+ Y FG ++ ++R P L+ L + V CG T
Sbjct: 572 ADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFT 631
Query: 301 CVLTSGGELYTWGSNENGCLG 321
+ + GE+ TWG G LG
Sbjct: 632 VAIGADGEVCTWGKGARGRLG 652
Score = 207 (77.9 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 60/189 (31%), Positives = 89/189 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLGLG+LE P + +H + + CG ++ LT + A G N +
Sbjct: 473 WGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNK 532
Query: 103 LGISENIGYSLEP--------------LRISGLKKE-VVQISTGYHHSSAITVDGELYMW 147
LG+ + I + EP + + L +E VV G HS+A+T G+ Y +
Sbjct: 533 LGL-DRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTF 591
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N +GQLG + + +P V L + A G +VA+ G+V +WG G G
Sbjct: 592 GSNQHGQLGTN--SCRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGARG 649
Query: 208 RLGHGQESS 216
RLG E +
Sbjct: 650 RLGRKDEET 658
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/215 (26%), Positives = 95/215 (44%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---LGKKAAKVIP--IPT 169
PLR+ L EVVQ+S G + +T G L MW G G L ++ P +
Sbjct: 330 PLRLPMLNTEVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSR 389
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+E SG+ K + G + +T G ++++G+G +G LGHG + + S+ P
Sbjct: 390 FLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDV-------SQ--P 440
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
++++ L G ++ A G H + V+ +G ++ P ++ P
Sbjct: 441 KIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPE 500
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
E V+CG + VLT ++ GSN LG+
Sbjct: 501 HEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGL 535
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 62/237 (26%), Positives = 104/237 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG G+ +P + A + + +ACG +H L ++ V+A G D G+
Sbjct: 421 FGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGR 480
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + P +++ + E ++ G S +TV+ ++ G N +LGL + +
Sbjct: 481 LGLG-TLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRIS 539
Query: 162 AKVIPIPT-KVE------CLSGIFTKQ-----AALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ P P +VE C Q A +G S AVT G+ ++G+
Sbjct: 540 SAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQ---- 595
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
HGQ LG + P L+ L +KV + A G + I +G V +G A
Sbjct: 596 -HGQ----LGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGA 647
Score = 153 (58.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 39/146 (26%), Positives = 67/146 (45%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVK 239
Q + G Q VT G+++ W A G G G S+ G ++ R ++ GV
Sbjct: 342 QVSAGRTQKAGVTKSGRLIMWEAPPMGTAG-GP--SLPGATEQLQPQFVSRFLEGQSGVT 398
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
+K + G L +AC+ + G + FG + + +P ++ L E +V CG
Sbjct: 399 IKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGA 458
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
H +++ E++ WG +NG LG+G
Sbjct: 459 SHVLAVSNEREVFAWGRGDNGRLGLG 484
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 195 (73.7 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 60/183 (32%), Positives = 95/183 (51%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 12 GSNSFGQLGVP--HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 69
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 70 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 129
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
L +AA +P+P K+E K A+ G+ VA T GK+ +WG G+LG
Sbjct: 130 LA--NEAA-FLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 186
Query: 213 QES 215
E+
Sbjct: 187 LET 189
Score = 157 (60.3 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 52/188 (27%), Positives = 84/188 (44%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
LTE G V + G N FGQLG+ + P I K++VV I+ G H+ A T G ++
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 146 MWGKNSNGQLGLGKKAA--KVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
WG G G++ + +P+ P++V L G + S ++T G+
Sbjct: 62 QWG---TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDE 255
V WG+ HGQ ++ FL P+ I+ + KV +G+ H E
Sbjct: 119 VYVWGSNK-----HGQLANEAAFLP-----VPQKIEAHCFQNEKVTAIWSGWTHLVAQTE 168
Query: 256 NGRVYIFG 263
G+++ +G
Sbjct: 169 TGKMFTWG 176
Score = 157 (60.3 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 58/191 (30%), Positives = 80/191 (41%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T +G++ G NS GQLG+ + + +P +E AA G +VA T G
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIELHKEKVVCIAA-GLRHAVAATASGI 59
Query: 198 VLSWGAG--GSGR-LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
V WG G GR L GQ L + E P + LE K AG HSA +
Sbjct: 60 VFQWGTGLASCGRRLCPGQT---LPLFFTAKE--PSRVTGLENSKAMCVLAGSDHSASLT 114
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELY 310
+ G VY++G + L E P I + E V G H T G+++
Sbjct: 115 DAGEVYVWGSNKHGQ-LANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMF 173
Query: 311 TWGSNENGCLG 321
TWG + G LG
Sbjct: 174 TWGRADYGQLG 184
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 221 (82.9 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 57/191 (29%), Positives = 101/191 (52%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G GD+GRLGLG SL + P + + + H + ++ GG H+L LT G V++ G ND
Sbjct: 362 FGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQ 421
Query: 101 GQLGIS-----ENIGYSLEPLRISGLKKE----VVQISTGYHHSSAITVDGELYMWGKNS 151
GQLGI + I ++ + S +++ ++++S G +HS AI+ + + Y WG++
Sbjct: 422 GQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSD 481
Query: 152 NGQLG--LGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G LG + + + +P I + + + + GF+ +VA++ G + SWG
Sbjct: 482 YGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQ 541
Query: 208 RLGHGQESSIL 218
RLG + + L
Sbjct: 542 RLGFKSDENQL 552
Score = 189 (71.6 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 59/209 (28%), Positives = 98/209 (46%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
K ++V++S G + S+ IT G L+ +G+ +G+LGLG+++ + P V+ L G F
Sbjct: 337 KIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIID 396
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV- 240
+ G S+ +T G V S+G G+LG G S+ + + ++ + + +
Sbjct: 397 MSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINII 456
Query: 241 KIAAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHARRPSLI-SKLPYSEEV---- 293
K++A G+ HS I +N Y +G D V P LI S + V
Sbjct: 457 KVSAGGY-HSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFID 515
Query: 294 VCGGY-HTCVLTSGGELYTWGSNENGCLG 321
V G+ H ++ G LY+WG N LG
Sbjct: 516 VSSGFQHNVAMSIDGSLYSWGCNAGQRLG 544
Score = 158 (60.7 bits), Expect = 9.1e-07, Sum P(3) = 9.1e-07
Identities = 53/226 (23%), Positives = 102/226 (45%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKE-VVQ 127
K + L+CG + +T+ G ++ G D G+LG+ E ++ P + L+ ++
Sbjct: 337 KIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIID 396
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ------ 181
+S+G HS +T G ++ +G+N GQLG+G + + IP +++ +Q
Sbjct: 397 MSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQT-IPKQIQWFQTSQQQQQQPINI 455
Query: 182 --AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE----L 235
+ G S+A++ +WG G LG + + G P LI +
Sbjct: 456 IKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSID--VQG-----DRNLPVLINSNSVVV 508
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ VK ++GF H+ + +G +Y +G A ++ F+ + P
Sbjct: 509 DNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTP 554
Score = 142 (55.0 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 37/126 (29%), Positives = 61/126 (48%)
Query: 39 FAALWGNG--DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
+ +WGNG +Y + S+ + + + ++ G H+ F+T+ G +Y G
Sbjct: 160 YITIWGNGIRNYKNCNMSSIG------FSEMYNQQKIVLISTGAIHSSFITDQGNLYTFG 213
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKE----VVQISTGYHHSSAITVDGELYMWGKNSN 152
G+LG YS P + + + VV I+ G HS A+T+ G++Y WG N +
Sbjct: 214 DGLLGKLGHGNLESYS-SPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDS 272
Query: 153 GQLGLG 158
QLGLG
Sbjct: 273 CQLGLG 278
Score = 139 (54.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 37/139 (26%), Positives = 70/139 (50%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKH--------SLKALACGGAHTLFLTETGCVY 93
+G D G+LG+G ++ P F+ ++ ++ GG H++ +++ Y
Sbjct: 416 FGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTY 475
Query: 94 ATGLNDFGQLGISENI-GYSLEPLRISGLKKEV-----VQISTGYHHSSAITVDGELYMW 147
A G +D+G LG S ++ G P+ I+ V + +S+G+ H+ A+++DG LY W
Sbjct: 476 AWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSW 535
Query: 148 GKNSNGQLGLGKKAAKVIP 166
G N+ +LG ++ P
Sbjct: 536 GCNAGQRLGFKSDENQLTP 554
Score = 132 (51.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
++ G+ ++ +S +IG+S E ++++V ISTG HSS IT G LY +G
Sbjct: 163 IWGNGIRNYKNCNMS-SIGFS-EMYN----QQKIVLISTGAIHSSFITDQGNLYTFGDGL 216
Query: 152 NGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LG G + P + + + A G + S+A+T GKV SWG S +LG
Sbjct: 217 LGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLG 276
Query: 211 HGQESS 216
G SS
Sbjct: 277 LGNGSS 282
Score = 94 (38.1 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 239 KVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLP--YSEE 292
K+KI + G SA I + G ++ FG ++ E + + P L+ L + +
Sbjct: 337 KIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIID 396
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ GG H+ VLT+ G ++++G N+ G LGIG
Sbjct: 397 MSSGGGHSLVLTNKGLVFSFGRNDQGQLGIG 427
Score = 40 (19.1 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 43 WGNGDYGRLGLGS 55
WG D +LGLG+
Sbjct: 267 WGGNDSCQLGLGN 279
Score = 37 (18.1 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 305 SGGELYTWGSNEN 317
SGG L W N N
Sbjct: 1232 SGGNLLDWCRNNN 1244
Score = 37 (18.1 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLF-QEGNHARRPSLISKLPYSEEVVCGGYHT 300
I A ++HS CI I D ++ +L Q+G P +IS S+++ T
Sbjct: 1266 IQAIAYMHSNCI-------IHRDLKLENVLIRQDGT----P-VISDFDLSKDISANVNVT 1313
Query: 301 CVLTSGG-ELY 310
+GG ELY
Sbjct: 1314 VFNINGGTELY 1324
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 193 (73.0 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 66/227 (29%), Positives = 103/227 (45%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCS--AFEKHSLKALACGGAHTLFLTETGCV 92
L+ L G YG+LGLG E P + + + +K++A GG H+ +T G +
Sbjct: 12 LRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGEL 71
Query: 93 YATGLNDFGQLGIS--ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+ G N GQLG++ E++ +SG V +++ G+ + + G + G N
Sbjct: 72 FVCGHNKAGQLGLNHTEDVLCFTLCTALSGFC--VQEVACGWDFTIILGRAGLVLSCGSN 129
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ GQLG+ + + + IP K++ A G ++A T G V WG G + R
Sbjct: 130 AFGQLGVPQISGPCL-IPQKIKQSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAK 188
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ L + E P IK LE VKVK AAG H C+ G
Sbjct: 189 RVHQGKTLPVFWAAKE--PCEIKGLEDVKVKRVAAGSYH--CVSLTG 231
Score = 176 (67.0 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 70/242 (28%), Positives = 105/242 (43%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR--ISGLKKEVVQISTGYH 133
+AC H+ + CV G N +GQLG+ + L +S +++ I+ G
Sbjct: 4 IAC---HSHLILRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGG 60
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS+ IT GEL++ G N GQLGL V+ T LSG ++ A G++ ++ +
Sbjct: 61 HSAVITGAGELFVCGHNKAGQLGLNH-TEDVLCF-TLCTALSGFCVQEVACGWDFTIILG 118
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G VLS G+ G+LG Q S P+ IK+ K AAG H+
Sbjct: 119 RAGLVLSCGSNAFGQLGVPQISGPC--------LIPQKIKQSLKEKAVGIAAGLRHALAA 170
Query: 254 DENGRVYIFGDRAVDKML-FQEGNH------ARRPSLISKLP--YSEEVVCGGYHTCVLT 304
E+G V+ +G + +G A+ P I L + V G YH CV
Sbjct: 171 TESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGLEDVKVKRVAAGSYH-CVSL 229
Query: 305 SG 306
+G
Sbjct: 230 TG 231
Score = 111 (44.1 bits), Expect = 0.00053, P = 0.00053
Identities = 49/172 (28%), Positives = 69/172 (40%)
Query: 148 GKNSNGQLGLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G NS GQLGLG K ++P K V C K A G S +TG G++ G +
Sbjct: 21 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDI-KSIAGGGGHSAVITGAGELFVCGHNKA 79
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG +L F T+ L G V+ A G+ + + G V G A
Sbjct: 80 GQLGLNHTEDVLCFTLCTA---------LSGFCVQEVACGWDFTIILGRAGLVLSCGSNA 130
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGS 314
++ + Q P I K E+ V G H T G ++ WG+
Sbjct: 131 FGQLGVPQISGPCLIPQKI-KQSLKEKAVGIAAGLRHALAATESGLVFQWGT 181
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 186 (70.5 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 68/247 (27%), Positives = 110/247 (44%)
Query: 57 ESRWRPVVCSAFEKHSLKALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
++ W P + + G AH+L +T G +++ G ND GQLG + LE
Sbjct: 107 QNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDT--KRLE 164
Query: 115 -PLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P I GL +EV V + G +H+ A+T +G +Y +G+N GQLG G + V+ P ++
Sbjct: 165 APKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLS-PATIQ 223
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS---EYTP 229
+G + A G E S+ V G + S+G G+LGH + + + E P
Sbjct: 224 -YNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIP 282
Query: 230 RLI-----KELEG-------VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
R + K +G V + A G H+ +D RV+ +G ++ E
Sbjct: 283 RRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD 342
Query: 278 ARRPSLI 284
P L+
Sbjct: 343 EMVPRLV 349
Score = 185 (70.2 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 58/200 (29%), Positives = 89/200 (44%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKL-GICKRW-ISSTLQRRFAALWGNGDYGRLGLGSLESR 59
LG++L +Y D+++ + G C + T + + + WG D G+LG G +
Sbjct: 105 LGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWS-WGRNDKGQLGHGDTKRL 163
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P + + + A ACG HTL LTE G VY G N GQLG L P I
Sbjct: 164 EAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQ 223
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
+ +V+++ G S + G LY +G GQLG K I ++E +
Sbjct: 224 YNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDG-KFIARAQRIEFDCELIP 282
Query: 180 KQAALGFEQSVAVTGGGKVL 199
++ A+ E+ T G+VL
Sbjct: 283 RRVAIFIEK----TKDGQVL 298
Score = 159 (61.0 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 50/161 (31%), Positives = 77/161 (47%)
Query: 168 PTKVECLSGIFTKQAALG--FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P + CLS + G S+ +T GK+ SWG G+LGHG +
Sbjct: 112 PHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRL-------- 163
Query: 226 EYTPRLIKELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
E P+LI+ L G +V +AAA G H+ + ENG VY FG+ + ++ +GN
Sbjct: 164 E-APKLIEGL-GEEVIVAAACGRNHTLALTENGTVYTFGENKLGQL--GQGNQTDAVLSP 219
Query: 285 SKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + Y+ + V CG + ++ G LY++G E G LG
Sbjct: 220 ATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLG 260
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 49/181 (27%), Positives = 78/181 (43%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL-RISGLK-KEVVQISTGYH 133
+ACG HTL L V++ G +G+LG +E + L ++ + QI GY
Sbjct: 308 VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQ 367
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
S A++ G L+ WG + + + P V+ L G + A G + S+ V
Sbjct: 368 CSFALSEMGGLFFWGVTNTSR--------ESTMYPKAVQDLCGWKIRSLACG-KSSIIVA 418
Query: 194 GGGKVLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
+SWG + G LG+G + S T + +K L+GV + G+ HS
Sbjct: 419 ADDSTISWGPSPTFGELGYGDN-------KPKSSTTAQEVKTLDGVYSEQVVMGYSHSLV 471
Query: 253 I 253
I
Sbjct: 472 I 472
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 39/160 (24%), Positives = 70/160 (43%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY 93
Q+R + WG G YGRLG + P + F+ A + CG + L+E G ++
Sbjct: 321 QKRVFS-WGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLF 379
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN- 152
G+ + + E+ Y + G K + ++ G S + D WG +
Sbjct: 380 FWGVTNTSR----ESTMYPKAVQDLCGWK--IRSLACG-KSSIIVAADDSTISWGPSPTF 432
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G+LG G K +V+ L G++++Q +G+ S+ +
Sbjct: 433 GELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVI 472
Score = 68 (29.0 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ +V CG HT VL S +++WG G LG
Sbjct: 305 ARDVACGANHTLVLDSQKRVFSWGFGGYGRLG 336
Score = 61 (26.5 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 18/80 (22%), Positives = 33/80 (41%)
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEV 293
V + A G H+ +D RV+ +G ++ E P L+ + + ++
Sbjct: 303 VVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQI 362
Query: 294 VCGGYHTCVLTSGGELYTWG 313
CG + L+ G L+ WG
Sbjct: 363 YCGYQCSFALSEMGGLFFWG 382
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 155 (59.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 62/210 (29%), Positives = 91/210 (43%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF----GQLGISENIGYSLEPLRI- 118
VC S AL G C A G D G L + N S L+
Sbjct: 42 VCQVSASWSYTALVTRGGRVELSGSVSCA-ADGCRDVWASEGLLVVQRNKSGSGTELQAW 100
Query: 119 ---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA-AKVIPIPTKVECL 174
S L+ E + + + +S GE + G L L A A + P P + L
Sbjct: 101 VPGSALQGEPLWVQ---NLASGAKAQGEDEPGSEPRMGTLPLLPCARAYMTPQPPFCQPL 157
Query: 175 SG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ + +Q LG E ++ + G+V SWG G G+LGHG S+ +E PRL++
Sbjct: 158 APELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHG---SL------EAELEPRLLE 208
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L+G+++ AAG HS C+ E G +YI+G
Sbjct: 209 ALQGLRMAEVAAGGWHSVCVSETGDIYIWG 238
Score = 134 (52.2 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG GSLE+ P + A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 185 WGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 244
Query: 103 LGISENIGYSLEPLR 117
L + G + +R
Sbjct: 245 LALPTRSGTEKKTVR 259
Score = 94 (38.1 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ LP + V CG HT V+T GELYTWG + G LG
Sbjct: 293 PALLD-LPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 335
Score = 83 (34.3 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
L + V+ S G H++ +T GELY WG GQLG
Sbjct: 300 LGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 335
Score = 45 (20.9 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 13/64 (20%), Positives = 28/64 (43%)
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE----EVVCGGY 298
A+ G H+A + G +Y +G ++ ++ + +P + + V CG +
Sbjct: 307 ASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCGPW 366
Query: 299 HTCV 302
+T V
Sbjct: 367 NTYV 370
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 205 (77.2 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 78/286 (27%), Positives = 123/286 (43%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 357 GALLPGAIEQP-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLG 415
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
S +P + L E+VQ++ G H A++ + EL+ WG+ G+LGLG + +
Sbjct: 416 HGSLNDIS-QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH 474
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSIL 218
P V G ++ G + S+ +T G+ L+ G+ +LG G+E +
Sbjct: 475 CCP--QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPH 532
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGNH 277
+ +TP L+ + G HSA + +G Y FG A
Sbjct: 533 QQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNA--------RRV 584
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+R P + L + V CG T + + GE+++WG G LG
Sbjct: 585 SRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG 630
Score = 198 (74.8 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 64/199 (32%), Positives = 92/199 (46%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
ST + FA WG GD GRLGLG+ ES P + + + CG ++ LT G
Sbjct: 450 STERELFA--WGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQA 507
Query: 93 YATGLNDFGQLGISE-NIG------------YSLEPLRISGLKKE-VVQISTGYHHSSAI 138
A G N F +LG+ ++G + PL + L +E ++ + G HS+A+
Sbjct: 508 LACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAV 567
Query: 139 T-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
T G+ Y +G N A +V P +V+ L GI A G +VA+ G+
Sbjct: 568 TXASGDCYTFGSN----------ARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGE 617
Query: 198 VLSWGAGGSGRLGHGQESS 216
V SWG G GRLG E +
Sbjct: 618 VFSWGKGARGRLGRKDEDA 636
Score = 152 (58.6 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 54/224 (24%), Positives = 91/224 (40%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG GSL +P + A + + +ACG +H L L+ ++A G D G+
Sbjct: 406 FGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGR 465
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + L +E ++ G S +TV G+ G N +LGL +
Sbjct: 466 LGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSL 525
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P + + FT + +Q ++ L + G + R
Sbjct: 526 GEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVD---LGTAHSAAVTXASGDCYTFGSNAR 582
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
S P ++ L+G+K+ A G + I G V+ +G A
Sbjct: 583 RVSR-APCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGA 625
Score = 137 (53.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 33/118 (27%), Positives = 57/118 (48%)
Query: 209 LGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG G + + G + ++ R ++ GV +K A G L +AC+ + G + FG +
Sbjct: 352 LGAGGGALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN 411
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ N +P+++ L E +V CG H L++ EL+ WG + G LG+G
Sbjct: 412 GCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLG 469
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+E SG+ K A G + +T G ++++G+G +G LGHG L S+ P
Sbjct: 376 LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGS-------LNDISQ--PT 426
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPY 289
+++ L G ++ A G H + ++ +G ++ L +H P L+ P
Sbjct: 427 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCC-PQLVPMPPG 485
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
E VVCG + +LT G+ GSN LG+
Sbjct: 486 QEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL 520
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 165 (63.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 64/218 (29%), Positives = 97/218 (44%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGIS----ENIGYSLE-PLRISGLKKEVVQIS 129
+LA G AHT+ LT GCVY+ G FG+LG E + +E P + G + +V ++
Sbjct: 20 SLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVA 79
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKVE---CLSGIFTKQAALG 185
G +HS A++ DG ++ WG N GQLG G+ + I E S + +G
Sbjct: 80 AGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREVG 139
Query: 186 FEQSVAVTGGGKVLSWG---AGGSGRLGH--GQESSILGFLRSTSEYTPRLIKELEGVKV 240
+ V G ++S GG G+ Q+S L TS P I + G V
Sbjct: 140 SDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTV 199
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVD-KMLFQEGNH 277
A G H + G ++ D + D +L+ GN+
Sbjct: 200 LKVACGDEHVVALVGPGDIH--KDNSYDVSVLYSWGNN 235
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 57/207 (27%), Positives = 92/207 (44%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI----PTKVECLSG 176
L ++++ ++ G H+ A+T DG +Y WG+ G+LG GK++ +++P+ P + E
Sbjct: 14 LSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEG-DR 72
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG------FLRSTSEYTPR 230
I A G S+AV+ G V WG G+LG E+S+ F R TS +
Sbjct: 73 IRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLN 132
Query: 231 LIKELEGVKVKIAA--AGFLHSACIDENGRVYIFG-----DRAVDKMLFQEGNHARRPSL 283
G +K+ AG + S ID G ++++G D D L P L
Sbjct: 133 DSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPIL 192
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELY 310
+V CG H L G+++
Sbjct: 193 DFHGRTVLKVACGDEHVVALVGPGDIH 219
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 71/238 (29%), Positives = 105/238 (44%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKA--LACGGAHTLFLT---ET----GCV 92
WGN +G+LGLG ESR RP F +K L +ACG HT LT ET
Sbjct: 232 WGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSIC 291
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKN 150
+ G + GQLG N SL P +S L + +V + G H+S ++ +G ++ WG
Sbjct: 292 WTFGFGENGQLGHRSNKSSSL-PEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGM- 349
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG---FEQSVAVTGGGKVLSWGAGGSG 207
+ GLG + T+VE ++ + G F V V+ G G
Sbjct: 350 ---ERGLG--LCPDVNF-TEVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVDGGY 403
Query: 208 RL---GHGQESSILGFLRSTSEYTPRLI---KELEGVKVKIAAAGFLHSACIDENGRV 259
+L G G+ + +LG + Y P L+ EL+ K ++ G SA +E R+
Sbjct: 404 KLWSWGRGR-NGVLGTGNVSDCYVPTLVFWPNELKPEKEEVPDDG--KSASTEEIKRL 458
Score = 147 (56.8 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 61/223 (27%), Positives = 98/223 (43%)
Query: 116 LRIS-GLKKEVVQISTG-YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-E 172
L+++ G + V + G H ++ V LY WG N +GQLGLG ++ P +
Sbjct: 200 LKVACGDEHVVALVGPGDIHKDNSYDVS-VLYSWGNNHHGQLGLGDGESRARPQTVETFN 258
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
SG+ A G + +T K G G G E+ LG + S P +
Sbjct: 259 QKSGLTVYDIACGAHHTALLTYR-KETPKGPSICWTFGFG-ENGQLGHRSNKSSSLPEPV 316
Query: 233 KEL-EGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVD---KMLFQE---GNHA--RRPS 282
+L E + G H++ + G V+ +G +R + + F E G+ + R+ S
Sbjct: 317 SDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKIS 376
Query: 283 L-ISKLPYSEEVVCGGYHTCVLTSGG-ELYTWGSNENGCLGIG 323
S+ +V CG HT ++ GG +L++WG NG LG G
Sbjct: 377 GGSSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTG 419
Score = 104 (41.7 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 29/85 (34%), Positives = 42/85 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC-----SAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG G +GRLG G PV+ + ++ + +A G H+L +++ G V+ G
Sbjct: 40 WGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGY 99
Query: 98 NDFGQLGIS-ENIGYSLEPLRISGL 121
N +GQLG EN SL P I L
Sbjct: 100 NIYGQLGFDGEN---SLAPCLIKNL 121
Score = 41 (19.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
WG YG+LG S ++ + FE+ +
Sbjct: 97 WGYNIYGQLGFDGENSLAPCLIKNLFERET 126
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 205 (77.2 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 78/286 (27%), Positives = 123/286 (43%)
Query: 49 GRLGLGSLESRWRPVVCSAF-EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G L G++E +P S F E S +K +ACG T LT+ G + G G LG
Sbjct: 361 GALLPGAIEQP-QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLG 419
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
S +P + L E+VQ++ G H A++ + EL+ WG+ G+LGLG + +
Sbjct: 420 HGSLNDIS-QPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESH 478
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSIL 218
P V G ++ G + S+ +T G+ L+ G+ +LG G+E +
Sbjct: 479 CCP--QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPH 536
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGNH 277
+ +TP L+ + G HSA + +G Y FG A
Sbjct: 537 QQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNA--------RRV 588
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+R P + L + V CG T + + GE+++WG G LG
Sbjct: 589 SRAPCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLG 634
Score = 198 (74.8 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 64/199 (32%), Positives = 92/199 (46%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
ST + FA WG GD GRLGLG+ ES P + + + CG ++ LT G
Sbjct: 454 STERELFA--WGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQA 511
Query: 93 YATGLNDFGQLGISE-NIG------------YSLEPLRISGLKKE-VVQISTGYHHSSAI 138
A G N F +LG+ ++G + PL + L +E ++ + G HS+A+
Sbjct: 512 LACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAV 571
Query: 139 T-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
T G+ Y +G N A +V P +V+ L GI A G +VA+ G+
Sbjct: 572 TXASGDCYTFGSN----------ARRVSRAPCRVQGLQGIKISTVACGDAFTVAIGAEGE 621
Query: 198 VLSWGAGGSGRLGHGQESS 216
V SWG G GRLG E +
Sbjct: 622 VFSWGKGARGRLGRKDEDA 640
Score = 152 (58.6 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 54/224 (24%), Positives = 91/224 (40%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG GSL +P + A + + +ACG +H L L+ ++A G D G+
Sbjct: 410 FGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGR 469
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + L +E ++ G S +TV G+ G N +LGL +
Sbjct: 470 LGLGTRESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSL 529
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P + + FT + +Q ++ L + G + R
Sbjct: 530 GEEPAPHQQVEEAVTFTPLGSAPLDQEPLLSVD---LGTAHSAAVTXASGDCYTFGSNAR 586
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
S P ++ L+G+K+ A G + I G V+ +G A
Sbjct: 587 RVSR-APCRVQGLQGIKISTVACGDAFTVAIGAEGEVFSWGKGA 629
Score = 137 (53.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 33/118 (27%), Positives = 57/118 (48%)
Query: 209 LGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG G + + G + ++ R ++ GV +K A G L +AC+ + G + FG +
Sbjct: 356 LGAGGGALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSN 415
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ N +P+++ L E +V CG H L++ EL+ WG + G LG+G
Sbjct: 416 GCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLG 473
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+E SG+ K A G + +T G ++++G+G +G LGHG L S+ P
Sbjct: 380 LEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGS-------LNDISQ--PT 430
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPY 289
+++ L G ++ A G H + ++ +G ++ L +H P L+ P
Sbjct: 431 IVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCC-PQLVPMPPG 489
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
E VVCG + +LT G+ GSN LG+
Sbjct: 490 QEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL 524
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 150 (57.9 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+Q LG E ++ + G+V SWG G G+LGHG + E PRL++ L+G+
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA---------ELEPRLLEALQGLV 211
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+ AAG HS C+ E G +YI+G ++ N A +++ +E+
Sbjct: 212 MAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREELNED 264
Score = 131 (51.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 182 WGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQIS-TG 131
L + + N+ E + L ++ Q+ TG
Sbjct: 242 LALPTRNLAEDGETVAREELNEDGSQVKRTG 272
Score = 123 (48.4 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGY 132
+ L G H L L G V++ G GQLG + LEP + L+ V+ +++ G
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 133 HHSSAITVDGELYMWGKNSNGQLGL 157
HS ++ G++Y+WG N +GQL L
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLAL 244
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 59/247 (23%), Positives = 108/247 (43%)
Query: 90 GCVYATGLNDFGQ-LGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
G + G FGQ LG +S PLR +G+ ++ ++S + +++ +T G L +
Sbjct: 7 GAWFGFGFCGFGQELGSGRGRQVHSPSPLR-AGV--DICRVSASWSYTAFVTRGGRLELS 63
Query: 148 GKNSNGQLGLGKKA------AKVIPIPTKVECLSGIFTKQAALGFE----QSVAVTGGGK 197
G +++G G K A V+ E L ++ ++AL E Q+V G+
Sbjct: 64 G-SASGAAGRCKDAWASEGLLAVLRAGPGPEALLQVWAAESALRGEPLWAQNVVPEAEGE 122
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
G +GRL ++ + + L EL ++++ A H+ +D G
Sbjct: 123 DDPAGEAQAGRLP--LLPCARAYVSPRAPFYRPLAPELRARQLELGAE---HALLLDAAG 177
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
+V+ +G ++ P L+ L EV GG+H+ ++ G++Y WG N
Sbjct: 178 QVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWN 237
Query: 316 ENGCLGI 322
E+G L +
Sbjct: 238 ESGQLAL 244
Score = 94 (38.1 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ LP + V CG HT V+T GELYTWG + G LG
Sbjct: 289 PALLD-LPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 331
Score = 81 (33.6 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ V+ S G H++ +T GELY WG GQLG
Sbjct: 299 DAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 331
Score = 78 (32.5 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
V P P ++ G +A+ G + VT G++ +WG G G+LGH +S+
Sbjct: 285 VQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSL 338
Score = 52 (23.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS----LI 284
P L+ G A+ G H+A + G +Y +G ++ ++ RP +
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 348
Query: 285 SKLPYSEEVVCGGYHTCV 302
K + V CG ++T V
Sbjct: 349 DKQLQVKAVTCGPWNTYV 366
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 165 (63.1 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 182 WGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P R E V ++ + DG + + G
Sbjct: 242 LAL---------PTRNLAEDGETVA-----REATELNEDGSQVK--RTGGAEDGAPAPFI 285
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
V P P ++ G +A+ G + VT G++ +WG G G+LGH +S+
Sbjct: 286 AVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSL 340
Score = 149 (57.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 32/84 (38%), Positives = 47/84 (55%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+Q LG E ++ + G+V SWG G G+LGHG + E PRL++ L+G+
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEA---------ELEPRLLEALQGLV 211
Query: 240 VKIAAAGFLHSACIDENGRVYIFG 263
+ AAG HS C+ E G +YI+G
Sbjct: 212 MAEVAAGGWHSVCVSETGDIYIWG 235
Score = 123 (48.4 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGY 132
+ L G H L L G V++ G GQLG + LEP + L+ V+ +++ G
Sbjct: 161 RQLELGAEHALLLDAAGQVFSWGGGRHGQLGHG-TLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 133 HHSSAITVDGELYMWGKNSNGQLGL 157
HS ++ G++Y+WG N +GQL L
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLAL 244
Score = 118 (46.6 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+ G H+ + G+++ WG +GQLG G A++ P +E L G+ + A G
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEP--RLLEALQGLVMAEVAAGG 219
Query: 187 EQSVAVTGGGKVLSWGAGGSGRL 209
SV V+ G + WG SG+L
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQL 242
Score = 94 (38.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ LP + V CG HT V+T GELYTWG + G LG
Sbjct: 291 PALLD-LPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLG 333
Score = 52 (23.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 18/78 (23%), Positives = 32/78 (41%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS----LI 284
P L+ G A+ G H+A + G +Y +G ++ ++ RP +
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 350
Query: 285 SKLPYSEEVVCGGYHTCV 302
K + V CG ++T V
Sbjct: 351 DKQLQVKAVTCGPWNTYV 368
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 200 (75.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 82/308 (26%), Positives = 129/308 (41%)
Query: 38 RFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R A +G G+LGL ++ +P + A E+ ++ A G HTLFLT+TG VYA G
Sbjct: 135 RKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACG 194
Query: 97 LNDFGQLGISE---NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
N GQ G+ NI YS P+ G +++I G S + + G L+ +G G
Sbjct: 195 ENKSGQCGVGNTHANI-YSPTPINYRG--PPIIRIGCGAEFSVILDIKGSLHTFGLPEYG 251
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS----VAVTGGGKVLSWGAGGSGRL 209
QLG A K K+ K+ L E+S V G +++ + G + +
Sbjct: 252 QLGHNTDA-KYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTV 310
Query: 210 GHGQESSI----------LGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENG 257
+ + LG E PRL+K + +G + G S ++E G
Sbjct: 311 AIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELG 370
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNE 316
+++FG + G P + L G +T ++ S + L WG++
Sbjct: 371 LLFLFGQNK------KTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTLIAWGASP 424
Query: 317 N-GCLGIG 323
G LGIG
Sbjct: 425 TFGELGIG 432
Score = 185 (70.2 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 61/211 (28%), Positives = 98/211 (46%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQ 127
EK+ A AHT+ + G N GQLG+S++I + +P I L++ +VQ
Sbjct: 114 EKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQ 173
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+ G HH+ +T G +Y G+N +GQ G+G A + PT + G + G E
Sbjct: 174 AAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYS-PTPIN-YRGPPIIRIGCGAE 231
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS---EYTPRLI-------KE--- 234
SV + G + ++G G+LGH ++ S E +P+ + KE
Sbjct: 232 FSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHV 291
Query: 235 --LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++GV++ A G H+ ID RVY +G
Sbjct: 292 TPVDGVQIVDFACGNNHTVAIDSKKRVYSWG 322
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 198 (74.8 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 60/188 (31%), Positives = 90/188 (47%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGNG +LG +E R + + F +K +A G H LT+ + + GLN FG
Sbjct: 245 WGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFG 304
Query: 102 QLGISENI---GYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
Q G+SE++ +P R++ L VV I+ G HHS ++ DG+LY G+ ++G
Sbjct: 305 QCGVSEDVEDGALVTKPKRLA-LPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVG 363
Query: 157 LGKK------------AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ K A+ +P+PTK+ + K A G SVAV G SWG G
Sbjct: 364 IPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF--KSVAAGSHHSVAVAQNGIAYSWGFG 421
Query: 205 GSGRLGHG 212
+ +G G
Sbjct: 422 ETYAVGLG 429
Score = 175 (66.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 66/234 (28%), Positives = 105/234 (44%)
Query: 43 WGNG--DYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG + G LG ++ + P F K+++ LA G H LFL E G V+A G
Sbjct: 189 WGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNG 248
Query: 99 DFGQLG--ISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
QLG + E +L+P R GL+ V I++G +H A+T D +L WG N GQ
Sbjct: 249 QQNQLGRKVMERFRLKTLDP-RPFGLR-HVKYIASGENHCFALTKDNKLVSWGLNQFGQC 306
Query: 156 GLGKKA--AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G+ + ++ P ++ + + A G S+ ++ G + S G +G +
Sbjct: 307 GVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPK 366
Query: 214 ESS---ILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFG 263
++ + + P L +L V K K AAG HS + +NG Y +G
Sbjct: 367 DNLPEYTYKDVHGKARAVP-LPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWG 419
Score = 172 (65.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 67/275 (24%), Positives = 116/275 (42%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGL---NDFGQLGI-SENIGYSLEPLRISGLKK- 123
E H + LA + L G VYA G N+ G LG + I P ++ K
Sbjct: 163 EGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNE-GILGFYQDKIKIQKTPWKVPTFSKY 221
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQA 182
+VQ++ G H + +G ++ WG QLG +K + + T G+ K
Sbjct: 222 NIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLG--RKVMERFRLKTLDPRPFGLRHVKYI 279
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G A+T K++SWG G+ G ++ G L + P+ + + V ++
Sbjct: 280 ASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVED-GALVTK----PKRLALPDNVVIRS 334
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---------HARR-----PSLISKLP 288
AAG HS + ++G +Y G + ++ + N H + P+ ++ +P
Sbjct: 335 IAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVP 394
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V G +H+ + G Y+WG E +G+G
Sbjct: 395 KFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLG 429
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 198 (74.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 69/263 (26%), Positives = 116/263 (44%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRISGLKKE----VVQISTGYHH 134
H LTE G +Y G N G+LG+ + S P E +VQ++ +
Sbjct: 189 HAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRY 248
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK----VECLSGIFTKQAALGFEQSV 190
A T G +Y+WG N G+LGL + ++ P+ E + Q +G ++
Sbjct: 249 LVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHTL 308
Query: 191 AVTGGGKVLSWGAGGSGRLG-HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G + +WG G+LG Q+ L + + P L++ + + +++ A G
Sbjct: 309 ALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRF-PGLLERNDRI-IELIAGG-AR 365
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK--LP-------YSEEVVCGGYHT 300
S E G +YI+G R + ++ + P L+++ P + E++ G HT
Sbjct: 366 SLARTEQGFIYIWGARWL--LVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHT 423
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
T G +Y WG N G LG+G
Sbjct: 424 LARTEQGYIYAWGRNYYGQLGLG 446
Score = 169 (64.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 71/293 (24%), Positives = 126/293 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLT-ETGCVYAT--G 96
WGN G+L G++ +P + S + + A FL+ + + AT G
Sbjct: 92 WGNNYTGQLDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFLSGKARSLVATRQG 151
Query: 97 -LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
L+++ IS ++ R L +VQ+ + Y H+ +T +G +Y WG N +G+L
Sbjct: 152 QLHEYYWERISNTRSEFIQH-RHYELNVTIVQLLSDYRHAFILTEEGGIYGWGFNISGEL 210
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQS--VAVTGGGKVLSWGAGGSGRLG 210
GLG + + P + + L F VA T G V WG GRLG
Sbjct: 211 GLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLG 270
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
E L + + ++ P + ++V + G H+ + + G +Y +G + ++
Sbjct: 271 LDDEQDRLHPVELSWDFFPEWHPDDYIIQVVV---GDRHTLALTQLGYIYAWGKNSYGQL 327
Query: 271 LFQEGNHARRPSLI--SKLP-YSE------EVVCGGYHTCVLTSGGELYTWGS 314
F++ RP+L+ ++ P E E++ GG + T G +Y WG+
Sbjct: 328 GFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA 380
Score = 151 (58.2 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 59/219 (26%), Positives = 96/219 (43%)
Query: 12 YYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS-AF-- 68
Y L++ ++ +L R++ + + +WG GRLGL + R PV S F
Sbjct: 231 YLLERGDRI-VQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFP 289
Query: 69 EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL----RISGL 121
E H + + G HTL LT+ G +YA G N +GQLG + + L R GL
Sbjct: 290 EWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGL 349
Query: 122 KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ ++++ G S A T G +Y+WG + L G + P+ G+
Sbjct: 350 LERNDRIIELIAGGARSLARTEQGFIYIWG--ARWLLVRGDPEFRHHPMLLTENYFPGLR 407
Query: 179 TK-----QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ + G + ++A T G + +WG G+LG G
Sbjct: 408 RRGDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLG 446
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 68/261 (26%), Positives = 108/261 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKA------LACGGAHTLFLTETGCVYAT 95
WG G LGLG R +P + F + L+ L + + T G VY
Sbjct: 202 WGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVW 261
Query: 96 GLNDFGQLGISENIGYSLEPLRIS-GLKKE------VVQISTGYHHSSAITVDGELYMWG 148
G N G+LG+ + L P+ +S E ++Q+ G H+ A+T G +Y WG
Sbjct: 262 GFNYRGRLGLDDEQD-RLHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWG 320
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL-----GFEQSVAVTGGGKVLSWGA 203
KNS GQLG + + P G+ + + G +S+A T G + WGA
Sbjct: 321 KNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA 380
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L G + T Y P L + + + V++ A G H+ E G +Y +G
Sbjct: 381 --RWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHL-VELIA-GPDHTLARTEQGYIYAWG 436
Query: 264 DRAVDKMLFQEGNHARRPSLI 284
++ + R+P+L+
Sbjct: 437 RNYYGQLGLGDRRIQRQPALL 457
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 198 (74.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 69/263 (26%), Positives = 116/263 (44%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRISGLKKE----VVQISTGYHH 134
H LTE G +Y G N G+LG+ + S P E +VQ++ +
Sbjct: 189 HAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRY 248
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK----VECLSGIFTKQAALGFEQSV 190
A T G +Y+WG N G+LGL + ++ P+ E + Q +G ++
Sbjct: 249 LVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVGDRHTL 308
Query: 191 AVTGGGKVLSWGAGGSGRLG-HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G + +WG G+LG Q+ L + + P L++ + + +++ A G
Sbjct: 309 ALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRF-PGLLERNDRI-IELIAGG-AR 365
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK--LP-------YSEEVVCGGYHT 300
S E G +YI+G R + ++ + P L+++ P + E++ G HT
Sbjct: 366 SLARTEQGFIYIWGARWL--LVRGDPEFRHHPMLLTENYFPGLRRRGDHLVELIAGPDHT 423
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
T G +Y WG N G LG+G
Sbjct: 424 LARTEQGYIYAWGRNYYGQLGLG 446
Score = 169 (64.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 71/293 (24%), Positives = 126/293 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLT-ETGCVYAT--G 96
WGN G+L G++ +P + S + + A FL+ + + AT G
Sbjct: 92 WGNNYTGQLDFGNIHEMTKPARIPLDSFIPEMAPDDYVVQFASADFLSGKARSLVATRQG 151
Query: 97 -LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
L+++ IS ++ R L +VQ+ + Y H+ +T +G +Y WG N +G+L
Sbjct: 152 QLHEYYWERISNTRSEFIQH-RHYELNVTIVQLLSDYRHAFILTEEGGIYGWGFNISGEL 210
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQS--VAVTGGGKVLSWGAGGSGRLG 210
GLG + + P + + L F VA T G V WG GRLG
Sbjct: 211 GLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVWGFNYRGRLG 270
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
E L + + ++ P + ++V + G H+ + + G +Y +G + ++
Sbjct: 271 LDDEQDRLHPVELSWDFFPEWHPDDYIIQVVV---GDRHTLALTQLGYIYAWGKNSYGQL 327
Query: 271 LFQEGNHARRPSLI--SKLP-YSE------EVVCGGYHTCVLTSGGELYTWGS 314
F++ RP+L+ ++ P E E++ GG + T G +Y WG+
Sbjct: 328 GFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA 380
Score = 151 (58.2 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 59/219 (26%), Positives = 96/219 (43%)
Query: 12 YYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS-AF-- 68
Y L++ ++ +L R++ + + +WG GRLGL + R PV S F
Sbjct: 231 YLLERGDRI-VQLNFADRYLVARTAQGHVYVWGFNYRGRLGLDDEQDRLHPVELSWDFFP 289
Query: 69 EKHS---LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL----RISGL 121
E H + + G HTL LT+ G +YA G N +GQLG + + L R GL
Sbjct: 290 EWHPDDYIIQVVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGL 349
Query: 122 KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ ++++ G S A T G +Y+WG + L G + P+ G+
Sbjct: 350 LERNDRIIELIAGGARSLARTEQGFIYIWG--ARWLLVRGDPEFRHHPMLLTENYFPGLR 407
Query: 179 TK-----QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ + G + ++A T G + +WG G+LG G
Sbjct: 408 RRGDHLVELIAGPDHTLARTEQGYIYAWGRNYYGQLGLG 446
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 68/261 (26%), Positives = 108/261 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKA------LACGGAHTLFLTETGCVYAT 95
WG G LGLG R +P + F + L+ L + + T G VY
Sbjct: 202 WGFNISGELGLGDRFERSQPTELPQNFFPYLLERGDRIVQLNFADRYLVARTAQGHVYVW 261
Query: 96 GLNDFGQLGISENIGYSLEPLRIS-GLKKE------VVQISTGYHHSSAITVDGELYMWG 148
G N G+LG+ + L P+ +S E ++Q+ G H+ A+T G +Y WG
Sbjct: 262 GFNYRGRLGLDDEQD-RLHPVELSWDFFPEWHPDDYIIQVVVGDRHTLALTQLGYIYAWG 320
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL-----GFEQSVAVTGGGKVLSWGA 203
KNS GQLG + + P G+ + + G +S+A T G + WGA
Sbjct: 321 KNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA 380
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L G + T Y P L + + + V++ A G H+ E G +Y +G
Sbjct: 381 --RWLLVRGDPEFRHHPMLLTENYFPGLRRRGDHL-VELIA-GPDHTLARTEQGYIYAWG 436
Query: 264 DRAVDKMLFQEGNHARRPSLI 284
++ + R+P+L+
Sbjct: 437 RNYYGQLGLGDRRIQRQPALL 457
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 198 (74.8 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 63/205 (30%), Positives = 92/205 (44%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGIS------ENIGYS---LEPLRISGLKKE 124
K + G H L L G +Y+ G FG LG ENI Y+ + ++ +
Sbjct: 248 KKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENI-YTPKKITTFTLNNNESR 306
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL----SGIFTK 180
+V I+ G +HS +T D E+Y +G GQLG G+ IP +++ +G K
Sbjct: 307 IVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIK 366
Query: 181 QAALG-FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
G S +T G V SWG G LGHG + Y+P+ I+ L +K
Sbjct: 367 SIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNEN---------HYSPKKIQSLSNIK 417
Query: 240 VKIAAAGFLHSACIDENGRVYIFGD 264
KI + GF H+ N +Y+FGD
Sbjct: 418 -KITS-GFKHTLAQSINNDIYVFGD 440
Score = 197 (74.4 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 59/182 (32%), Positives = 91/182 (50%)
Query: 43 WGNGDYGRLG--LGS--LESRWRPVVCSAFEKHSLKA----LACGGAHTLFLTETGCVYA 94
WGNG +G LG +GS E+ + P + F ++ ++ +ACGG H++FLT +Y
Sbjct: 269 WGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYT 328
Query: 95 TGLNDFGQLGISEN--IGYSLEPLRI-----SGLKKEVVQISTGYHHSSA-ITVDGELYM 146
G +FGQLG EN + + + P RI + ++ I G H +S IT DG +Y
Sbjct: 329 FGYGEFGQLGHGENDTLNHYI-PKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYS 387
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG N G LG G P K++ LS I K+ GF+ ++A + + +G
Sbjct: 388 WGWNDGGSLGHGTNENHYSP--KKIQSLSNI--KKITSGFKHTLAQSINNDIYVFGDNTF 443
Query: 207 GR 208
G+
Sbjct: 444 GQ 445
Score = 162 (62.1 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 58/212 (27%), Positives = 95/212 (44%)
Query: 76 LACGGAHTLFLT-ETGCVYATGLNDFGQLGISENI------GYSLEPL-RISGLKKEVVQ 127
++ GG + T + +Y+ G + +G LGI +I + E + +I ++
Sbjct: 121 VSLGGNFIILQTKDDNQLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEKFNDNIIS 180
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK---VIPI-PTKVECLSG------- 176
I +GY HS +T D +Y WG+N QLG G++ K P P++ E S
Sbjct: 181 IVSGYEHSLVVTKDDGIYGWGRNHKNQLG-GRERVKDKSSSPSSPSEDEYYSKPIKVLKE 239
Query: 177 ---IFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
IF K+ G + ++ + G + SWG G G LGHG S+ + + + T
Sbjct: 240 TDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFT 299
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ E V IA G+ HS + + +Y FG
Sbjct: 300 LNNNESRIVDIACGGY-HSMFLTNDNEIYTFG 330
Score = 156 (60.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 59/228 (25%), Positives = 101/228 (44%)
Query: 106 SENIGYSLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--LGK 159
SE+ YS +P+++ + K+ +I +G H+ + DG LY WG G LG +G
Sbjct: 225 SEDEYYS-KPIKVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGS 283
Query: 160 KAAKVIPIPTKVEC--LSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ I P K+ L+ ++ A G S+ +T ++ ++G G G+LGHG+
Sbjct: 284 NDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGEND 343
Query: 216 SILGFLRSTSEYTPRLIKEL----EGVKVKIAAAG-FLHSACIDENGRVYIFGDRAVDKM 270
++ + Y P+ IK G K+K AG +S I +G VY +G +
Sbjct: 344 TL-------NHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSL 396
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+ P I L +++ G HT + ++Y +G N G
Sbjct: 397 GHGTNENHYSPKKIQSLSNIKKITSGFKHTLAQSINNDIYVFGDNTFG 444
Score = 135 (52.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 35/122 (28%), Positives = 69/122 (56%)
Query: 43 WGNGDYGRLGLGSLES--RWRPV-VCSAFEK---HSLKALACGG-AHTLFLTETGCVYAT 95
+G G++G+LG G ++ + P + S + + +K++ G A++ ++T G VY+
Sbjct: 329 FGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSW 388
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G ND G LG N + P +I L + +I++G+ H+ A +++ ++Y++G N+ GQ
Sbjct: 389 GWNDGGSLGHGTNENH-YSPKKIQSLSN-IKKITSGFKHTLAQSINNDIYVFGDNTFGQT 446
Query: 156 GL 157
L
Sbjct: 447 AL 448
Score = 125 (49.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 40/153 (26%), Positives = 67/153 (43%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
K+ G + ++ + G + SWG G G LGHG S+ + + + T + E
Sbjct: 248 KKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRI 307
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NH--ARRPSLISKLPYSEEV- 293
V IA G+ HS + + +Y FG ++ E NH +R ++
Sbjct: 308 VDIACGGY-HSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIK 366
Query: 294 -VCGGYH--TCVLTSGGELYTWGSNENGCLGIG 323
+ G H + +T+ G +Y+WG N+ G LG G
Sbjct: 367 SIFAGDHANSFYITTDGSVYSWGWNDGGSLGHG 399
Score = 52 (23.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 44 GNGDYGRLGLG-SLE----SRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATG 96
G YG LG+G S++ + EK + + ++ G H+L +T+ +Y G
Sbjct: 142 GKSKYGVLGIGRSIDDDDDNNNNNEKVYKIEKFNDNIISIVSGYEHSLVVTKDDGIYGWG 201
Query: 97 LNDFGQLGISENI 109
N QLG E +
Sbjct: 202 RNHKNQLGGRERV 214
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 195 (73.7 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 68/244 (27%), Positives = 108/244 (44%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHS 135
+C AH+L +T G +++ G N+ GQLG + P I GL EV V + G +H+
Sbjct: 157 SCA-AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA-PRLIEGLSHEVIVSAACGRNHT 214
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+T G ++ +G+N GQLGLG + +P P ++ TK A G E S+ +
Sbjct: 215 LALTETGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYNGQPITKMAC-GAEFSMIMDCK 272
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTS---EYTPRLI-----KELEG-------VKV 240
G + S+G G+LGH + + + E PR + K +G V V
Sbjct: 273 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV 332
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY---SEEVVCGG 297
+ A G H+ +D RV+ +G ++ E P L+ + + G
Sbjct: 333 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAG 392
Query: 298 YHTC 301
Y TC
Sbjct: 393 Y-TC 395
Score = 171 (65.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 60/237 (25%), Positives = 95/237 (40%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G + P + + + ACG HTL LTETG V+A G N GQ
Sbjct: 174 WGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 233
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ P +I + + +++ G S + G LY +G GQLG
Sbjct: 234 LGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDG- 292
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQS----VAVTGGGKVLSWGAGGSGRLGHGQESSI- 217
K I ++E + ++ A+ E++ + V G + L + +
Sbjct: 293 KFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVF 352
Query: 218 ---------LGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
LG E PRL+K + G AG+ S + E G ++ +G
Sbjct: 353 SWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG 409
Score = 156 (60.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 68/236 (28%), Positives = 104/236 (44%)
Query: 108 NIGYSL-EPLR---ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
N+G +L P R ++G++ V + HS IT +G+L+ WG+N GQLG G K
Sbjct: 131 NLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD--TK 188
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+ P +E LS AA G ++A+T G V ++G G+LG G ++ +
Sbjct: 189 RVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQ 248
Query: 224 TSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGD-----RAVDKMLFQEGN 276
+ K G + + G L+S E G++ D RA ++ +
Sbjct: 249 IMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARA-QRIEYDCEL 307
Query: 277 HARRPSL-ISK------LPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG 321
RR ++ I K LP VV CG HT VL S +++WG G LG
Sbjct: 308 VPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 363
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 49/188 (26%), Positives = 82/188 (43%)
Query: 148 GKNSNGQLGLGKKAAKVIPIPT-KVECLSGIFTKQAALGFEQSVAVTGG---GKVLSWGA 203
G +G G GK+AA+ P K + + T+ ++ V + G G++L +GA
Sbjct: 56 GLELDGAPGGGKRAAR--PATAGKAGGAAVVITEPEHT--KERVKLEGSKCKGQLLIFGA 111
Query: 204 GGSGRLGHGQESSILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFL--HSACIDENGRV 259
+G + R+ + + P L GV+V+ +G HS I G++
Sbjct: 112 TNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKL 171
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSN 315
+ +G ++ + P LI L S EV+ CG HT LT G ++ +G N
Sbjct: 172 WSWGRNEKGQLGHGDTKRVEAPRLIEGL--SHEVIVSAACGRNHTLALTETGSVFAFGEN 229
Query: 316 ENGCLGIG 323
+ G LG+G
Sbjct: 230 KMGQLGLG 237
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 172 (65.6 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 59/186 (31%), Positives = 87/186 (46%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHS 135
A G H + L E G VY+ FG+L +N S EP+ + L ++ VV ++ G HS
Sbjct: 44 ALGARHGVLLVEGGQVYS-----FGELPWKQNQTSSAEPILEAVLSEQRVVFVAAGSAHS 98
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK-------QAALGFEQ 188
+T DG ++MWG+N +GQ GL VIP PT V L T + A G +
Sbjct: 99 GVVTEDGGVHMWGENVHGQCGL--LGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQH 156
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE-YTPRLIKELEGVKVKIAAAGF 247
++A++ +V +WG+G LG ST + P+ + L G V A G
Sbjct: 157 TLALSAKHEVWAWGSGCQ-----------LGLNTSTFPVWKPQKVDHLSGRHVLQVACGS 205
Query: 248 LHSACI 253
HS +
Sbjct: 206 AHSVAL 211
Score = 134 (52.2 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 48/171 (28%), Positives = 79/171 (46%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E++ WG+ +GQLG G ++ P V+ L+G + A G S+A+T +V SWG
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQP--DCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWG 607
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV--- 259
SG+LGH + S + + P+L K +G++V AG H+ + + +
Sbjct: 608 CNTSGQLGH---------MESPTTF-PQLTKLSDGIRVWDIGAGLQHTLLLADGDCIQPI 657
Query: 260 -YIFGDRA--VDKMLFQE---GNHARRPSLIS---KLPYSEEVVCGGYHTC 301
Y G + V + +E + ++P L+ L Y V GG TC
Sbjct: 658 LYYSGQQVKEVPEPTEEEEQTAEYTQQPVLLPFCMNLGYVSSVYAGG-RTC 707
Score = 129 (50.5 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 43/141 (30%), Positives = 68/141 (48%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL--EPLRIS 119
P++ + + + +A G AH+ +TE G V+ G N GQ G+ +G S+ P +
Sbjct: 77 PILEAVLSEQRVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGL---LGLSVIPNPTPVG 133
Query: 120 GLKKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
L E +++++ G H+ A++ E++ WG S QLGL V P KV
Sbjct: 134 VLDSEATPPQTVKILEVACGDQHTLALSAKHEVWAWG--SGCQLGLNTSTFPVWK-PQKV 190
Query: 172 ECLSGIFTKQAALGFEQSVAV 192
+ LSG Q A G SVA+
Sbjct: 191 DHLSGRHVLQVACGSAHSVAL 211
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 58/187 (31%), Positives = 86/187 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG G L R +P V S K LK +A G H+L LT V++ G N G
Sbjct: 554 WGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLK-VAAGAHHSLALTAQSQVFSWGCNTSG 612
Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG E+ + ++S G++ V I G H+ + DG+ +GQ
Sbjct: 613 QLGHMESPTTFPQLTKLSDGIR--VWDIGAGLQHT-LLLADGDCIQPILYYSGQ------ 663
Query: 161 AAKVIPIPTKVECLSGIFTKQAAL-GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K +P PT+ E + +T+Q L F ++ G V S AGG + +++G
Sbjct: 664 QVKEVPEPTEEEEQTAEYTQQPVLLPFCMNL-----GYVSSVYAGGR-TCAALTDCNVMG 717
Query: 220 FLRSTSE 226
F+ S E
Sbjct: 718 FIASLHE 724
Score = 86 (35.3 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 34/113 (30%), Positives = 51/113 (45%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V SWG G G+LGHG +L L+ P +K L G +V AAG HS +
Sbjct: 550 EVWSWGQGQDGQLGHGD---LLPRLQ------PDCVKSLNGKEVLKVAAGAHHSLALTAQ 600
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSG 306
+V+ +G ++ E + P L +KL ++ G HT +L G
Sbjct: 601 SQVFSWGCNTSGQLGHME-SPTTFPQL-TKLSDGIRVWDIGAGLQHTLLLADG 651
Score = 84 (34.6 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 30/105 (28%), Positives = 49/105 (46%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHS-----LKAL--ACGGAHTLFLTETGCVYA 94
+WG +G+ GL L P + + +K L ACG HTL L+ V+A
Sbjct: 109 MWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAKHEVWA 168
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G QLG++ + +P ++ L + V+Q++ G HS A+
Sbjct: 169 WGSGC--QLGLNTSTFPVWKPQKVDHLSGRHVLQVACGSAHSVAL 211
Score = 74 (31.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+P + L E +V G +H+ LT+ ++++WG N +G LG
Sbjct: 572 QPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCNTSGQLG 615
Score = 45 (20.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 308 ELYTWGSNENGCLGIG 323
E+++WG ++G LG G
Sbjct: 550 EVWSWGQGQDGQLGHG 565
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 166 (63.5 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 58/168 (34%), Positives = 87/168 (51%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMW 147
G VYATG N+ GQLG+ + S L IS + + Q+S G + S+A+T +GELY +
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHL-ISFFTSQHKIKQLSAGSNTSAALTAEGELYTF 61
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGG 205
G+ +G+LGL K +P + + GI K Q A G +V +T V ++G G
Sbjct: 62 GEPESGKLGLPPKLLVNHKVP---QLVPGISEKVIQVACGGGHTVVLTEKA-VYTFGLGQ 117
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+LG G F TSE P++I+ ++ K+ G H+A I
Sbjct: 118 FGQLGLGT------FTFETSE--PKVIESVKDKKISHVCCGENHTALI 157
Score = 142 (55.0 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 38/120 (31%), Positives = 65/120 (54%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLND 99
A GN + G+LGLG + R + S F +H +K L+ G + LT G +Y G +
Sbjct: 7 ATGGNNE-GQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGEPE 65
Query: 100 FGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG+ + + + P + G+ ++V+Q++ G H+ +T + +Y +G GQLGLG
Sbjct: 66 SGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLT-EKAVYTFGLGQFGQLGLG 124
Score = 128 (50.1 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 45/136 (33%), Positives = 65/136 (47%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GGG+V + G G+LG G F S +T + K+K +AG SA +
Sbjct: 1 GGGQVYATGGNNEGQLGLGDTDERSAF-HLISFFTSQH-------KIKQLSAGSNTSAAL 52
Query: 254 DENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
G +Y FG+ K+ NH + P L+ + SE+V+ CGG HT VLT
Sbjct: 53 TAEGELYTFGEPESGKLGLPPKLLVNH-KVPQLVPGI--SEKVIQVACGGGHTVVLTEKA 109
Query: 308 ELYTWGSNENGCLGIG 323
+YT+G + G LG+G
Sbjct: 110 -VYTFGLGQFGQLGLG 124
Score = 107 (42.7 bits), Expect = 0.00022, P = 0.00022
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 142 GELYMWGKNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
G++Y G N+ GQLGLG + A +I T + KQ + G S A+T G+
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKI-----KQLSAGSNTSAALTAEGE 57
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ ++G SG+LG +L + P+L+ + +++A G H+ + E
Sbjct: 58 LYTFGEPESGKLG--LPPKLL-----VNHKVPQLVPGISEKVIQVACGGG-HTVVLTEKA 109
Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLT 304
VY FG ++ L P +I + + V CG HT ++T
Sbjct: 110 -VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALIT 158
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 191 (72.3 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 75/287 (26%), Positives = 124/287 (43%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLNDF 100
WGN LG G +S+ P + F ++S +K + H++FL+ G +Y G
Sbjct: 150 WGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGHGQG 209
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL + QI+ H+ +T DG +Y +G N+ QLG+
Sbjct: 210 GRLGHGDE-QTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQLGILP 268
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A +P + + L G A G +V T V + G G G+LG+ + +
Sbjct: 269 PPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEA-VYTMGLNG-GQLGYLLDPN-- 324
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G T+ PR + L + V V + +A + C+ E G +Y+ D K+ ++ N
Sbjct: 325 GEKCVTA---PRQVSALHHKDVSVSLVSASDGATVCVTERGDIYLLADYQCKKIASKQLN 381
Query: 277 HARRPSLISKLPYSEEVVC----GGYHTCVLT--SGGELYTWGSNEN 317
+ L Y + GG C+L G ++ W S+ N
Sbjct: 382 LKKVLVNGGYLEYKVDTQHLKENGGQKICILALDEAGRIFCWKSSNN 428
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 55/184 (29%), Positives = 83/184 (45%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y WG N N LG G + +K P + + ++ KQ L SV ++ G++ + G
Sbjct: 146 EVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLCKFHSVFLSHKGQIYTCG 205
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L + AA H+ + E+G VY F
Sbjct: 206 HGQGGRLGHGDEQTCL---------VPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTF 256
Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCG---G-YHTCVLTSGGELYTWGSNEN 317
G ++ + + P + +V G G +HT VL + +YT G N
Sbjct: 257 GLNTFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHT-VLWTKEAVYTMGLN-G 314
Query: 318 GCLG 321
G LG
Sbjct: 315 GQLG 318
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 153 (58.9 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 63/220 (28%), Positives = 100/220 (45%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SA+ T G++Y GK + LG+ G A K +
Sbjct: 416 LEKDLHIISTGFDEESAVLGAGREFALMKTASGKIYYTGKYQS--LGIKQGGPSAGKWVE 473
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + Q ++G + S A V G + G+ G G +S R
Sbjct: 474 LPITKSPKII-----QFSVGHDGSHALLVADDGSIFFTGSASKGEDGESTKSR-----RQ 523
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ SL
Sbjct: 524 SKPYKPKKIIKMEGKIVISTACNNGSSSVISKDGELYMFGKDAI---------YSDSTSL 574
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ L + +V G HTCVL GE++T+G N G G
Sbjct: 575 VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 614
Score = 134 (52.2 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 41/143 (28%), Positives = 66/143 (46%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F H +ALA H L + G + G+ S+ Y +R + VQ
Sbjct: 786 FMNHREQALARIRPHPAQLKHKRDKHKDGSGERGEKDASKITTYPPGAVRFD-CELRAVQ 844
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G+HHS + +G++Y +G +GQLG G ++ PT V+ L G T Q G
Sbjct: 845 VSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQALPGPST-QVTAGSN 901
Query: 188 QSVAVTGGGKVLSWGAGGSGRLG 210
+ + G+V ++G+ G+LG
Sbjct: 902 HTAILLMDGQVFTFGSFSKGQLG 924
Score = 133 (51.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 41/121 (33%), Positives = 58/121 (47%)
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYI 261
GSG G S I + Y P ++ EL V+V + GF HS + ENG VY
Sbjct: 814 GSGERGEKDASKI-------TTYPPGAVRFDCELRAVQV---SCGFHHSVILMENGDVYT 863
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
FG ++ + N P+L+ LP S +V G HT +L G+++T+GS G L
Sbjct: 864 FGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTAILLMDGQVFTFGSFSKGQL 923
Query: 321 G 321
G
Sbjct: 924 G 924
Score = 118 (46.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 47/186 (25%), Positives = 84/186 (45%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + + G ++ TG
Sbjct: 450 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIIQFSVGHDGSHALLVADDGSIFFTGSA 509
Query: 99 DFGQLGISENI---GYSLEPLRISGLKKEVVQISTGYHH--SSAITVDGELYMWGKNSNG 153
G+ G S +P +I ++ ++V IST ++ SS I+ DGELYM+GK++
Sbjct: 510 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIV-ISTACNNGSSSVISKDGELYMFGKDA-- 566
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ + ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 567 ---IYSDSTSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDT 617
Query: 214 ESSILG 219
S G
Sbjct: 618 GSMSQG 623
Score = 111 (44.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+ +G+ G K A+K+ P + +C + Q + GF SV + G V ++G G
Sbjct: 812 KDGSGERG-EKDASKITTYPPGAVRFDC--ELRAVQVSCGFHHSVILMENGDVYTFGYGQ 868
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 869 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTA-GSNHTAILLMDGQVFTFG 916
Score = 77 (32.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +H+ +L G++YT+G ++G LG G
Sbjct: 844 QVSCGFHHSVILMENGDVYTFGYGQHGQLGHG 875
Score = 69 (29.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 12 YYLKQDIKLGSKLGI---CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF 68
Y K+ IK+ K+ I C SS + + +G+ G ++ S +V
Sbjct: 527 YKPKKIIKMEGKIVISTACNNGSSSVISK-------DGELYMFGKDAIYSDSTSLVTD-L 578
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ H + +A G AHT L + G V+ G+N+ GQ G
Sbjct: 579 KGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 614
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 65/244 (26%), Positives = 107/244 (43%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHHS 135
+C AH+L +T G +++ G N+ GQLG + P I L E + ++ G +H+
Sbjct: 155 SCA-AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA-PRLIEALSHEAIVLAACGRNHT 212
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+T G ++ +G+N GQLGLG + +P P ++ TK A G E S+ +
Sbjct: 213 LALTDTGSVFAFGENKMGQLGLGNQT-DAVPSPAQIMYNGQPITKMAC-GAEFSMLMDCK 270
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTS---EYTPRLI-----KELEG-------VKV 240
G + S+G G+LGH + + + E PR + K +G V V
Sbjct: 271 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVV 330
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY---SEEVVCGG 297
+ A G H+ +D RV+ +G ++ E P L+ + + G
Sbjct: 331 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAG 390
Query: 298 YHTC 301
Y TC
Sbjct: 391 Y-TC 393
Score = 172 (65.6 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 60/237 (25%), Positives = 96/237 (40%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G + P + A ++ ACG HTL LT+TG V+A G N GQ
Sbjct: 172 WGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQ 231
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ P +I + + +++ G S + G LY +G GQLG
Sbjct: 232 LGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDG- 290
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQS----VAVTGGGKVLSWGAGGSGRLGHGQESSI- 217
K I ++E + ++ A+ E++ + V G + L + +
Sbjct: 291 KFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVF 350
Query: 218 ---------LGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
LG E PRL+K + G AG+ S + E G ++ +G
Sbjct: 351 SWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG 407
Score = 160 (61.4 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 69/236 (29%), Positives = 104/236 (44%)
Query: 108 NIGYSL-EPLR---ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
N+G +L P R +SG++ V + HS IT +G+L+ WG+N GQLG G K
Sbjct: 129 NLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGD--TK 186
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+ P +E LS AA G ++A+T G V ++G G+LG G ++ +
Sbjct: 187 RVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQ 246
Query: 224 TSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGD-----RAVDKMLFQEGN 276
+ K G + + G L+S E G++ D RA ++ +
Sbjct: 247 IMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARA-QRIEYDCEL 305
Query: 277 HARRPSL-ISK------LPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG 321
RR ++ I K LP VV CG HT VL S +++WG G LG
Sbjct: 306 VPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLG 361
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 47/186 (25%), Positives = 80/186 (43%)
Query: 148 GKNSNGQLGLGKKAAKVIPIPT-KVECLSGIFTKQAALGFEQSVAVTGG---GKVLSWGA 203
G +G G GK+ A+ P K + I T+ ++ V + G G++L +GA
Sbjct: 54 GPELDGAPGGGKRTAR--PATAGKAAGAAAIITEPEHT--KERVKLEGSKCKGQLLIFGA 109
Query: 204 GGSGRLGHGQESSILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFL--HSACIDENGRV 259
+G + R+ + + P L GV+V+ +G HS I G++
Sbjct: 110 TNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKL 169
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNEN 317
+ +G ++ + P LI L + V+ CG HT LT G ++ +G N+
Sbjct: 170 WSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKM 229
Query: 318 GCLGIG 323
G LG+G
Sbjct: 230 GQLGLG 235
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 160 (61.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 52/162 (32%), Positives = 82/162 (50%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 12 GSNSFGQLGVP--HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 69
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 70 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 129
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTG 194
L A +P+P K+E K A+ G+ VA TG
Sbjct: 130 LA---NEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTG 168
Score = 146 (56.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
LTE G V + G N FGQLG+ + P I K++VV I+ G H+ A T G ++
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 146 MWGKNSNGQLGLGKKAA--KVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
WG G G++ + +P+ P++V L G + S ++T G+
Sbjct: 62 QWG---TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 198 VLSWGAGGSGRLGH 211
V WG+ G+L +
Sbjct: 119 VYVWGSNKHGQLAN 132
Score = 120 (47.3 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 44/140 (31%), Positives = 66/140 (47%)
Query: 192 VTGGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+T G+VLS G+ G+LG HG ++ P+ I EL KV AAG H
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVV----------PQAI-ELHKEKVVCIAAGLRH 50
Query: 250 SACIDENGRVYIFGD--RAVDKMLFQEGN-----HARRPSLISKLPYSEE--VVCGGYHT 300
+ +G V+ +G + + L A+ PS ++ L S+ V+ G H+
Sbjct: 51 AVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHS 110
Query: 301 CVLTSGGELYTWGSNENGCL 320
LT GE+Y WGSN++G L
Sbjct: 111 ASLTDAGEVYVWGSNKHGQL 130
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 150 (57.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SA+ T +G++Y GK + LG+ G A K +
Sbjct: 391 LEKDLHIISTGFDEESAVLGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 448
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G + G+ G G +S R
Sbjct: 449 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQ 498
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ SL
Sbjct: 499 SKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI---------YSDSSSL 549
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ L + +V G HTCVL GE++T+G N G G
Sbjct: 550 VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 589
Score = 138 (53.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F H +ALA +H L + G + G+ S+ Y +R + VQ
Sbjct: 761 FMNHREQALARLRSHPAQLKHKRDKHKDGSGERGEKDASKITTYPPGSVRFD-CELRAVQ 819
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G+HHS + +G++Y +G +GQLG G ++ PT V+ L G T Q G
Sbjct: 820 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQALPGPST-QVTAGSN 876
Query: 188 QSVAVTGGGKVLSWGAGGSGRLG 210
+ + G+V ++G+ G+LG
Sbjct: 877 HTAVLLMDGQVFTFGSFSKGQLG 899
Score = 133 (51.9 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 42/121 (34%), Positives = 58/121 (47%)
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYI 261
GSG G S I + Y P ++ EL V+V + GF HS + ENG VY
Sbjct: 789 GSGERGEKDASKI-------TTYPPGSVRFDCELRAVQV---SCGFHHSVVLMENGDVYT 838
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
FG ++ + N P+L+ LP S +V G HT VL G+++T+GS G L
Sbjct: 839 FGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQL 898
Query: 321 G 321
G
Sbjct: 899 G 899
Score = 115 (45.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 425 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 484
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 485 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 541
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 542 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 589
Score = 112 (44.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+ +G+ G K A+K+ P + +C + Q + GF SV + G V ++G G
Sbjct: 787 KDGSGERG-EKDASKITTYPPGSVRFDC--ELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 843
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 844 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTA-GSNHTAVLLMDGQVFTFG 891
Score = 78 (32.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +H+ VL G++YT+G ++G LG G
Sbjct: 819 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 850
Score = 68 (29.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 12 YYLKQDIKLGSKLGI---CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF 68
Y K+ IK+ K+ + C SS + + +G+ G ++ S +V
Sbjct: 502 YKPKKIIKMEGKIVVYTACNNGSSSVISK-------DGELYMFGKDAIYSDSSSLVTD-L 553
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ H + +A G AHT L + G V+ G+N+ GQ G
Sbjct: 554 KGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 589
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 151 (58.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 63/220 (28%), Positives = 100/220 (45%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SAI T +G++Y GK + LG+ G A K +
Sbjct: 478 LEKDLHIISTGFDEESAILGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 535
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G + G+ G G +S R
Sbjct: 536 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQ 585
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ SL
Sbjct: 586 SKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI---------YSDSSSL 636
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ L + +V G HTCVL GE++T+G N G G
Sbjct: 637 VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 56 LESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
LE P+V + F H +ALA +H L + G + G+ S+ Y
Sbjct: 834 LEEGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDGSGERGEKDASKITTYPP 893
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+R + VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+
Sbjct: 894 GSVRFD-CELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQA 950
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L G T Q G + + G+V ++G+ G+LG
Sbjct: 951 LPGPST-QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 133 (51.9 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 42/121 (34%), Positives = 58/121 (47%)
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYI 261
GSG G S I + Y P ++ EL V+V + GF HS + ENG VY
Sbjct: 876 GSGERGEKDASKI-------TTYPPGSVRFDCELRAVQV---SCGFHHSVVLMENGDVYT 925
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
FG ++ + N P+L+ LP S +V G HT VL G+++T+GS G L
Sbjct: 926 FGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQL 985
Query: 321 G 321
G
Sbjct: 986 G 986
Score = 115 (45.5 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 512 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 571
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 572 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 628
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 629 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 112 (44.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+ +G+ G K A+K+ P + +C + Q + GF SV + G V ++G G
Sbjct: 874 KDGSGERG-EKDASKITTYPPGSVRFDC--ELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 931 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTA-GSNHTAVLLMDGQVFTFG 978
Score = 78 (32.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +H+ VL G++YT+G ++G LG G
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 937
Score = 68 (29.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 12 YYLKQDIKLGSKLGI---CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF 68
Y K+ IK+ K+ + C SS + + +G+ G ++ S +V
Sbjct: 589 YKPKKIIKMEGKIVVYTACNNGSSSVISK-------DGELYMFGKDAIYSDSSSLVTD-L 640
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ H + +A G AHT L + G V+ G+N+ GQ G
Sbjct: 641 KGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 147 (56.8 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 61/218 (27%), Positives = 98/218 (44%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ---------LGL---GKKAAKVIPIP 168
L+K++ ISTG+ SA+ G + K S+G+ LG+ G A K + +P
Sbjct: 478 LEKDLHIISTGFDEESAVLGAGREFALMKTSSGKIYYTGKYQSLGIKQGGPSAGKWVELP 537
Query: 169 -TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
TK + ++G + S A V G + G+ G G +S R +
Sbjct: 538 ITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQSK 587
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ SL++
Sbjct: 588 PYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI---------YSDSSSLVT 638
Query: 286 KLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
L + +V G HTCVL GE++T+G N G G
Sbjct: 639 DLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 56 LESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
LE P+V + F H +ALA +H L + G + G+ S+ Y
Sbjct: 834 LEEGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDGSGERGEKDASKITTYPP 893
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+R + VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+
Sbjct: 894 GSVRFD-CELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQA 950
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L G T Q G + + G+V ++G+ G+LG
Sbjct: 951 LPGPST-QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 133 (51.9 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 42/121 (34%), Positives = 58/121 (47%)
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYI 261
GSG G S I + Y P ++ EL V+V + GF HS + ENG VY
Sbjct: 876 GSGERGEKDASKI-------TTYPPGSVRFDCELRAVQV---SCGFHHSVVLMENGDVYT 925
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
FG ++ + N P+L+ LP S +V G HT VL G+++T+GS G L
Sbjct: 926 FGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQL 985
Query: 321 G 321
G
Sbjct: 986 G 986
Score = 115 (45.5 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 512 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 571
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 572 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 628
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 629 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 112 (44.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+ +G+ G K A+K+ P + +C + Q + GF SV + G V ++G G
Sbjct: 874 KDGSGERG-EKDASKITTYPPGSVRFDC--ELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 931 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTA-GSNHTAVLLMDGQVFTFG 978
Score = 78 (32.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +H+ VL G++YT+G ++G LG G
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 937
Score = 68 (29.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 12 YYLKQDIKLGSKLGI---CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF 68
Y K+ IK+ K+ + C SS + + +G+ G ++ S +V
Sbjct: 589 YKPKKIIKMEGKIVVYTACNNGSSSVISK-------DGELYMFGKDAIYSDSSSLVTD-L 640
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ H + +A G AHT L + G V+ G+N+ GQ G
Sbjct: 641 KGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 151 (58.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 63/220 (28%), Positives = 100/220 (45%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SAI T +G++Y GK + LG+ G A K +
Sbjct: 516 LEKDLHIISTGFDEESAILGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 573
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G + G+ G G +S R
Sbjct: 574 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQ 623
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ SL
Sbjct: 624 SKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI---------YSDSSSL 674
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ L + +V G HTCVL GE++T+G N G G
Sbjct: 675 VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 56 LESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
LE P+V + F H +ALA +H L + G + G+ S+ Y
Sbjct: 872 LEEGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDGSGERGEKDASKITTYPP 931
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+R + VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+
Sbjct: 932 GSVRFD-CELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQA 988
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L G T Q G + + G+V ++G+ G+LG
Sbjct: 989 LPGPST-QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 133 (51.9 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 42/121 (34%), Positives = 58/121 (47%)
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYI 261
GSG G S I + Y P ++ EL V+V + GF HS + ENG VY
Sbjct: 914 GSGERGEKDASKI-------TTYPPGSVRFDCELRAVQV---SCGFHHSVVLMENGDVYT 963
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
FG ++ + N P+L+ LP S +V G HT VL G+++T+GS G L
Sbjct: 964 FGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQL 1023
Query: 321 G 321
G
Sbjct: 1024 G 1024
Score = 115 (45.5 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 550 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 609
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 610 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 666
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 667 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 112 (44.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+ +G+ G K A+K+ P + +C + Q + GF SV + G V ++G G
Sbjct: 912 KDGSGERG-EKDASKITTYPPGSVRFDC--ELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 968
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 969 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTA-GSNHTAVLLMDGQVFTFG 1016
Score = 78 (32.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +H+ VL G++YT+G ++G LG G
Sbjct: 944 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 975
Score = 68 (29.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 12 YYLKQDIKLGSKLGI---CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF 68
Y K+ IK+ K+ + C SS + + +G+ G ++ S +V
Sbjct: 627 YKPKKIIKMEGKIVVYTACNNGSSSVISK-------DGELYMFGKDAIYSDSSSLVTD-L 678
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ H + +A G AHT L + G V+ G+N+ GQ G
Sbjct: 679 KGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 147 (56.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 61/218 (27%), Positives = 98/218 (44%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ---------LGL---GKKAAKVIPIP 168
L+K++ ISTG+ SA+ G + K S+G+ LG+ G A K + +P
Sbjct: 516 LEKDLHIISTGFDEESAVLGAGREFALMKTSSGKIYYTGKYQSLGIKQGGPSAGKWVELP 575
Query: 169 -TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
TK + ++G + S A V G + G+ G G +S R +
Sbjct: 576 ITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQSK 625
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ SL++
Sbjct: 626 PYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI---------YSDSSSLVT 676
Query: 286 KLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
L + +V G HTCVL GE++T+G N G G
Sbjct: 677 DLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 56 LESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
LE P+V + F H +ALA +H L + G + G+ S+ Y
Sbjct: 872 LEEGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDGSGERGEKDASKITTYPP 931
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+R + VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+
Sbjct: 932 GSVRFD-CELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQA 988
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L G T Q G + + G+V ++G+ G+LG
Sbjct: 989 LPGPST-QVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 133 (51.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 42/121 (34%), Positives = 58/121 (47%)
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYI 261
GSG G S I + Y P ++ EL V+V + GF HS + ENG VY
Sbjct: 914 GSGERGEKDASKI-------TTYPPGSVRFDCELRAVQV---SCGFHHSVVLMENGDVYT 963
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
FG ++ + N P+L+ LP S +V G HT VL G+++T+GS G L
Sbjct: 964 FGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQL 1023
Query: 321 G 321
G
Sbjct: 1024 G 1024
Score = 115 (45.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 550 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 609
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 610 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 666
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 667 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 112 (44.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+ +G+ G K A+K+ P + +C + Q + GF SV + G V ++G G
Sbjct: 912 KDGSGERG-EKDASKITTYPPGSVRFDC--ELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 968
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 969 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTA-GSNHTAVLLMDGQVFTFG 1016
Score = 78 (32.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +H+ VL G++YT+G ++G LG G
Sbjct: 944 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 975
Score = 68 (29.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 12 YYLKQDIKLGSKLGI---CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF 68
Y K+ IK+ K+ + C SS + + +G+ G ++ S +V
Sbjct: 627 YKPKKIIKMEGKIVVYTACNNGSSSVISK-------DGELYMFGKDAIYSDSSSLVTD-L 678
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ H + +A G AHT L + G V+ G+N+ GQ G
Sbjct: 679 KGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 155 (59.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 65/220 (29%), Positives = 100/220 (45%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SAI T +G++Y GK + LG+ G A K +
Sbjct: 492 LEKDLHIISTGFDEESAILGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 549
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G V G+ G G +S R
Sbjct: 550 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSVFFTGSASKGEDGESAKSR-----RQ 599
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ SL
Sbjct: 600 SKPYKPKKIIKMEGKIVVCTACNNGSSSVISKDGELYMFGKDAI---------YSDSSSL 650
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+S L + +V G HTCVL GE++T+G N G G
Sbjct: 651 VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 690
Score = 135 (52.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 56 LESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
LE P+V + F H +ALA +H L + + G+ S+ Y
Sbjct: 848 LEDGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDASGERGEKDASKVTTYPP 907
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+R + VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+
Sbjct: 908 GSVRFD-CEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQA 964
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L G T Q G + + G+V ++G+ G+LG
Sbjct: 965 LPGPST-QVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 127 (49.8 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 227 YTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
Y P ++ E+ V+V + GF HS + ENG VY FG ++ + N P+L
Sbjct: 905 YPPGSVRFDCEVRAVQV---SCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTL 961
Query: 284 ISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ LP S +V G HT VL G+++T+GS G LG
Sbjct: 962 VQALPGPSTQVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 116 (45.9 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 45/177 (25%), Positives = 81/177 (45%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G V+ TG
Sbjct: 526 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSA 585
Query: 99 DFGQLGISENI---GYSLEPLRISGLKKEVVQISTGYHH--SSAITVDGELYMWGKNSNG 153
G+ G S +P +I ++ ++V + T ++ SS I+ DGELYM+GK++
Sbjct: 586 SKGEDGESAKSRRQSKPYKPKKIIKMEGKIV-VCTACNNGSSSVISKDGELYMFGKDA-- 642
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ ++ + V L G F Q A+G + + G+V ++G G+ G
Sbjct: 643 ---IYSDSSSL------VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 690
Score = 116 (45.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+++G+ G K A+KV P + +C + Q + GF SV + G V ++G G
Sbjct: 888 KDASGERG-EKDASKVTTYPPGSVRFDC--EVRAVQVSCGFHHSVVLMENGDVYTFGYGQ 944
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 945 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTA-GSNHTAVLVMDGQVFTFG 992
Score = 78 (32.5 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +H+ VL G++YT+G ++G LG G
Sbjct: 920 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 951
Score = 73 (30.8 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 12 YYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
Y K+ IK+ K+ +C + + + + +G+ G ++ S +V S + H
Sbjct: 603 YKPKKIIKMEGKIVVCTACNNGSS----SVISKDGELYMFGKDAIYSDSSSLV-SDLKGH 657
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ +A G AHT L + G V+ G+N+ GQ G
Sbjct: 658 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 690
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 187 (70.9 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 58/202 (28%), Positives = 96/202 (47%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ CG HTL LT G +Y+ G N+ QLGI ++ +L+P+ ++ L + + G +
Sbjct: 1177 AIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQY 1235
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H++A+ DG+LYMWG GQLG G + + I P V Q +LG ++ +
Sbjct: 1236 HNAAVA-DGKLYMWGWGIYGQLGQG--SCENIATPQLVSFFKFKKILQISLGHAHTLVLC 1292
Query: 194 G-----------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP-RLIKELEGVKVK 241
G G ++ +G+ G+LG G G T P RL E+ ++
Sbjct: 1293 GAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDH--G---DTKTNLPVRL--EVGDCSLR 1345
Query: 242 IAAAGFLHSACIDENGRVYIFG 263
+ F + +DE R++ +G
Sbjct: 1346 LIHTKFFTNLAVDEQDRLFTWG 1367
Score = 106 (42.4 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 36/123 (29%), Positives = 56/123 (45%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT-------ETG-C-- 91
+WG G YG+LG GS E+ P + S F+ + ++ G AHTL L E C
Sbjct: 1247 MWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGN 1306
Query: 92 -VYATGLNDFGQLGISENIGYSLE---PLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
++ G N FGQLG + + P+R+ + I T + + A+ L+ W
Sbjct: 1307 ELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTW 1366
Query: 148 GKN 150
G +
Sbjct: 1367 GSS 1369
Score = 86 (35.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 29/103 (28%), Positives = 47/103 (45%)
Query: 224 TSEYTPRLI--KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-- 279
T TP L+ E+ G ++I++ G H I + +Y +G + ++ L E R
Sbjct: 1486 TEHLTPHLVDTSEVAGRILQISS-GLFHFCLISSSCTLYTWG-KNLEHQLGTEDKDRRAV 1543
Query: 280 -RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+PS I + V CG T V+T+ + +G N NG G
Sbjct: 1544 LKPSPIDSIERPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCG 1586
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 138 (53.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 56/209 (26%), Positives = 90/209 (43%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---GKKAAKVIPIP-TKVECL 174
+G +E I G + T G++Y GK + LG+ G + K + +P TK +
Sbjct: 516 TGFDEEAALIGAGREFALMKTASGKIYYTGKYQS--LGIKQGGPSSGKWVELPVTKSPKI 573
Query: 175 SGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
Q ++G + S A V G V G+ G G +S R Y P+ +
Sbjct: 574 V-----QFSVGHDGSHALLVAEDGSVFFTGSASKGEDGESTKSR-----RQPKPYKPKKM 623
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+LE A S+ + ++G +Y+FG A+ + + + L K + +
Sbjct: 624 IKLETKMAVYTACNNGSSSIVTKDGELYMFGKDAI----YSDST-CQVSDL--KGHFVTQ 676
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V G HTCVLT GE++T+G N G G
Sbjct: 677 VAMGKAHTCVLTKSGEVWTFGVNNKGQCG 705
Score = 132 (51.5 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 36/99 (36%), Positives = 51/99 (51%)
Query: 227 YTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
Y P ++ EL V+V + GF HS + ENG VY FG ++ + N P+L
Sbjct: 914 YPPGAVRFDCELRAVQV---SCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTL 970
Query: 284 ISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ LP S +V G HT VL G+++T+GS G LG
Sbjct: 971 VQALPGPSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 125 (49.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+ L G T Q G
Sbjct: 928 VQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GSPTLVQALPGPST-QVTAG 984
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLG 210
+ + G+V ++G+ G+LG
Sbjct: 985 SNHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 122 (48.0 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 47/176 (26%), Positives = 77/176 (43%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G V+ TG
Sbjct: 541 IYYTGKYQSLGIKQGGPSSGKWVELPVTKSPKIVQFSVGHDGSHALLVAEDGSVFFTGSA 600
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKEV-VQISTGYHH--SSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E + + T ++ SS +T DGELYM+GK+
Sbjct: 601 SKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTACNNGSSSIVTKDGELYMFGKD---- 656
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
A +V L G F Q A+G + +T G+V ++G G+ G
Sbjct: 657 -------AIYSDSTCQVSDLKGHFVTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCG 705
Score = 109 (43.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+ + + G K A+K+ P + +C + Q + GF SV + G V ++G G
Sbjct: 897 KDGSSERG-DKDASKITTYPPGAVRFDC--ELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 953
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R + P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 954 HGQLGHGDVNS-----RGS----PTLVQALPGPSTQVTA-GSNHTAVLLMDGQVFTFG 1001
Score = 78 (32.5 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +H+ VL G++YT+G ++G LG G
Sbjct: 929 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 960
Score = 76 (31.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 12 YYLKQDIKLGSKLGI---CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF 68
Y K+ IKL +K+ + C SS + + +G+ G ++ S V S
Sbjct: 618 YKPKKMIKLETKMAVYTACNNGSSSIVTK-------DGELYMFGKDAIYSDSTCQV-SDL 669
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ H + +A G AHT LT++G V+ G+N+ GQ G
Sbjct: 670 KGHFVTQVAMGKAHTCVLTKSGEVWTFGVNNKGQCG 705
Score = 39 (18.8 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKL 24
LGR A++K LK+ K+ SK+
Sbjct: 90 LGRGKKALSKKKLKRRQKVKSKV 112
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 150 (57.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 62/220 (28%), Positives = 100/220 (45%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SA+ T +G++Y GK + LG+ G A K +
Sbjct: 478 LEKDLHIISTGFDEESAVLGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 535
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G + G+ G G +S R
Sbjct: 536 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSR-----RQ 585
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ SL
Sbjct: 586 SKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI---------YSDSSSL 636
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ L + +V G HTCVL GE++T+G N G G
Sbjct: 637 VTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 142 (55.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/143 (29%), Positives = 68/143 (47%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F H +ALA +H L + G + G+ S+ Y +R + VQ
Sbjct: 848 FMNHREQALARLRSHPAQLKHKRDKHKDGSGERGEKDASKITTYPPGSVRFD-CELRAVQ 906
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G+HHS + +G++Y +G +GQLG G ++ PT V+ L G T Q G
Sbjct: 907 VSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQALPGPST-QVTAGSN 963
Query: 188 QSVAVTGGGKVLSWGAGGSGRLG 210
+ A+ G+V ++G+ G+LG
Sbjct: 964 HTAALLMDGQVFTFGSFSKGQLG 986
Score = 129 (50.5 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 41/121 (33%), Positives = 57/121 (47%)
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYI 261
GSG G S I + Y P ++ EL V+V + GF HS + ENG VY
Sbjct: 876 GSGERGEKDASKI-------TTYPPGSVRFDCELRAVQV---SCGFHHSVVLMENGDVYT 925
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
FG ++ + N P+L+ LP S +V G HT L G+++T+GS G L
Sbjct: 926 FGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTAALLMDGQVFTFGSFSKGQL 985
Query: 321 G 321
G
Sbjct: 986 G 986
Score = 115 (45.5 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 45/176 (25%), Positives = 78/176 (44%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G ++ TG
Sbjct: 512 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSA 571
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 572 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 628
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ ++ ++ T L G F Q A+G + + G+V ++G G+ G
Sbjct: 629 --IYSDSSSLV---TD---LKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 113 (44.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 36/118 (30%), Positives = 59/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+ +G+ G K A+K+ P + +C + Q + GF SV + G V ++G G
Sbjct: 874 KDGSGERG-EKDASKITTYPPGSVRFDC--ELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 931 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTA-GSNHTAALLMDGQVFTFG 978
Score = 78 (32.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +H+ VL G++YT+G ++G LG G
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 937
Score = 68 (29.0 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 26/96 (27%), Positives = 44/96 (45%)
Query: 12 YYLKQDIKLGSKLGI---CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF 68
Y K+ IK+ K+ + C SS + + +G+ G ++ S +V
Sbjct: 589 YKPKKIIKMEGKIVVYTACNNGSSSVISK-------DGELYMFGKDAIYSDSSSLVTD-L 640
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ H + +A G AHT L + G V+ G+N+ GQ G
Sbjct: 641 KGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 157 (60.3 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 38/117 (32%), Positives = 63/117 (53%)
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGK-NSNGQLGLGKKA 161
G+++ + +EP+ + L KK +VQ+S G H+ ++ G+LY WG NS+GQLG G
Sbjct: 18 GVNQGDKHIIEPIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSK 77
Query: 162 -----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
K I + ++ LSG Q + G + + +T G + +WG+ G+L GQ
Sbjct: 78 NQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQ 134
Score = 153 (58.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 38/110 (34%), Positives = 56/110 (50%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL-NDFGQLGISENIGYSLEPLRIS- 119
P+ K ++ L+CG HTL L+++G +Y+ G N GQLG ++ +P I
Sbjct: 29 PIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKK 88
Query: 120 -GLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
L K V+Q+STG + +T G +Y WG N GQL LG+ K
Sbjct: 89 FSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQPVNK 138
Score = 150 (57.9 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 39/135 (28%), Positives = 69/135 (51%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
T + + G+ D LG G + + + ++ + ++CG H L L++ VY
Sbjct: 334 TTPTKVLSFGGSNDNNFLG-GVINNELQ-MMTDQMNSIKIIQISCGSNHILALSDQYHVY 391
Query: 94 ATGLNDFGQLG-------ISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGE 143
+ G + G+LG +S+N + P +I L+++ V+ +S+GY H A+T+D
Sbjct: 392 SWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSG 451
Query: 144 LYMWGKNSNGQLGLG 158
+ WGK S+GQLG G
Sbjct: 452 ILTWGKGSDGQLGTG 466
Score = 137 (53.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 54/186 (29%), Positives = 87/186 (46%)
Query: 87 TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
T T + G ND LG N + +++ +K ++QIS G +H A++ +Y
Sbjct: 335 TPTKVLSFGGSNDNNFLGGVINNELQMMTDQMNSIK--IIQISCGSNHILALSDQYHVYS 392
Query: 147 WGKNSNGQLGLGKKAAKV------IPIPTKVECLS--GIFTKQAALGFEQSVAVTGGGKV 198
WG +G+LG G+ + V I P K++ L G+ + G+ +A+T +
Sbjct: 393 WGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDSGI 452
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENG 257
L+WG G G+LG G I S E R+I + E + V+I G+ +S I E
Sbjct: 453 LTWGKGSDGQLGTGFRHDIW----SPFEIK-RVIDKNEKI-VQICC-GYFNSFFITLEKR 505
Query: 258 RVYIFG 263
+Y FG
Sbjct: 506 ELYQFG 511
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/122 (26%), Positives = 59/122 (48%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+++ WG+ N G K +I P +V L+ Q + G ++ ++ G + SWG
Sbjct: 11 QIFYWGRGVNQ----GDK--HIIE-PIEVPELNKKNIVQLSCGSTHTLVLSDSGDLYSWG 63
Query: 203 AGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
+ S G+LGHG + G ++ +++ LIK L G V + G + + + G +Y
Sbjct: 64 SSNSSGQLGHGDSKNQYGKPKNIKKFS--LIKALSGDSVIQVSTGLDFTFVLTDQGSIYN 121
Query: 262 FG 263
+G
Sbjct: 122 WG 123
Score = 72 (30.4 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ CG H L+ +Y+WGS E+G LG G
Sbjct: 373 QISCGSNHILALSDQYHVYSWGSAEHGKLGHG 404
Score = 71 (30.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 239 KVKIAAAGFLHSACIDENGRVYI-----FGDRAV--DKMLFQEGNHARRPSLI-SKLPYS 290
++K ++G+ H+ ++ENG FG + D + + P++I + LPY
Sbjct: 565 RIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYF 624
Query: 291 -EEVVCGGYHTCVLTSGGEL 309
E V CG +H+ + S L
Sbjct: 625 VESVQCGRWHSVAIVSNRNL 644
Score = 60 (26.2 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 23/77 (29%), Positives = 34/77 (44%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
KQ + G+ ++ + G+ LS G G G+LG + S + S Y P +I L
Sbjct: 567 KQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSID-KDSFVNY-PTVIPALLPYF 624
Query: 240 VKIAAAGFLHSACIDEN 256
V+ G HS I N
Sbjct: 625 VESVQCGRWHSVAIVSN 641
Score = 57 (25.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 294 VCGGY-HTCVLTSGGELYTWGSNENGCLGI 322
+ GY HT +L GE + G E G LGI
Sbjct: 569 ISSGYSHTLILNENGECLSIGQGEFGQLGI 598
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 155 (59.6 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 45/138 (32%), Positives = 73/138 (52%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 12 GSNSFGQLGVP--HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 69
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 70 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 129
Query: 155 LGLGKKAAKVIPIPTKVE 172
L A +P+P K+E
Sbjct: 130 LA---NEAAFLPVPQKIE 144
Score = 146 (56.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
LTE G V + G N FGQLG+ + P I K++VV I+ G H+ A T G ++
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 146 MWGKNSNGQLGLGKKAA--KVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
WG G G++ + +P+ P++V L G + S ++T G+
Sbjct: 62 QWG---TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 198 VLSWGAGGSGRLGH 211
V WG+ G+L +
Sbjct: 119 VYVWGSNKHGQLAN 132
Score = 120 (47.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 44/140 (31%), Positives = 66/140 (47%)
Query: 192 VTGGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+T G+VLS G+ G+LG HG ++ P+ I EL KV AAG H
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVV----------PQAI-ELHKEKVVCIAAGLRH 50
Query: 250 SACIDENGRVYIFGD--RAVDKMLFQEGN-----HARRPSLISKLPYSEE--VVCGGYHT 300
+ +G V+ +G + + L A+ PS ++ L S+ V+ G H+
Sbjct: 51 AVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHS 110
Query: 301 CVLTSGGELYTWGSNENGCL 320
LT GE+Y WGSN++G L
Sbjct: 111 ASLTDAGEVYVWGSNKHGQL 130
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 155 (59.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 65/220 (29%), Positives = 100/220 (45%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SAI T +G++Y GK + LG+ G A K +
Sbjct: 478 LEKDLHIISTGFDEESAILGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 535
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G V G+ G G +S R
Sbjct: 536 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSVFFTGSASKGEDGESAKSR-----RQ 585
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ SL
Sbjct: 586 SKPYKPKKIIKMEGKIVVCTACNNGSSSVISKDGELYMFGKDAI---------YSDSSSL 636
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+S L + +V G HTCVL GE++T+G N G G
Sbjct: 637 VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 135 (52.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 44/157 (28%), Positives = 72/157 (45%)
Query: 56 LESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
LE P+V + F H +ALA +H L + + G+ S+ Y
Sbjct: 834 LEDGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDASGERGEKDASKVTTYPP 893
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+R + VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+
Sbjct: 894 GSVRFD-CEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQA 950
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L G T Q G + + G+V ++G+ G+LG
Sbjct: 951 LPGPST-QVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 986
Score = 127 (49.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 227 YTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
Y P ++ E+ V+V + GF HS + ENG VY FG ++ + N P+L
Sbjct: 891 YPPGSVRFDCEVRAVQV---SCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTL 947
Query: 284 ISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ LP S +V G HT VL G+++T+GS G LG
Sbjct: 948 VQALPGPSTQVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 986
Score = 116 (45.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 45/177 (25%), Positives = 81/177 (45%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G V+ TG
Sbjct: 512 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSA 571
Query: 99 DFGQLGISENI---GYSLEPLRISGLKKEVVQISTGYHH--SSAITVDGELYMWGKNSNG 153
G+ G S +P +I ++ ++V + T ++ SS I+ DGELYM+GK++
Sbjct: 572 SKGEDGESAKSRRQSKPYKPKKIIKMEGKIV-VCTACNNGSSSVISKDGELYMFGKDA-- 628
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ ++ + V L G F Q A+G + + G+V ++G G+ G
Sbjct: 629 ---IYSDSSSL------VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 116 (45.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 37/118 (31%), Positives = 60/118 (50%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+++G+ G K A+KV P + +C + Q + GF SV + G V ++G G
Sbjct: 874 KDASGERG-EKDASKVTTYPPGSVRFDC--EVRAVQVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A G H+A + +G+V+ FG
Sbjct: 931 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTA-GSNHTAVLVMDGQVFTFG 978
Score = 78 (32.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +H+ VL G++YT+G ++G LG G
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 937
Score = 73 (30.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 12 YYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
Y K+ IK+ K+ +C + + + + +G+ G ++ S +V S + H
Sbjct: 589 YKPKKIIKMEGKIVVCTACNNGSS----SVISKDGELYMFGKDAIYSDSSSLV-SDLKGH 643
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ +A G AHT L + G V+ G+N+ GQ G
Sbjct: 644 FVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 167 (63.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 65/258 (25%), Positives = 118/258 (45%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQ--LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
G + E G +Y G + G+ LG+ G L P +I+ + K + + S G HS
Sbjct: 895 GVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINK-IYKCSLGNSHSLF 953
Query: 138 ITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+T ELY+ G N+NG+LGL +K+ ++ +PTKV + I+ K G S+ ++
Sbjct: 954 LTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSV 1013
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G + +G G G+ S S Y E VK + H +
Sbjct: 1014 DGFIYIFGEFIKGSNGNSNNMSC----EVISLYN-------EITNVKYMNGKYEHVFFLT 1062
Query: 255 ENGRVYIFGDRAVDKMLF---QEGNHARRPSLISK-LPYSEEVVCG--GYH--TCVLTSG 306
+ +++ G+ ++L +E N+ ++P LI+ L + +++ +H T + +
Sbjct: 1063 YDNKLFGIGNNKNCQILCDNEKENNYIKKPKLITYFLKENNKIIESIFSFHNVTFIQFNN 1122
Query: 307 GELYTWG--SNENGCLGI 322
E++ WG +N + C+GI
Sbjct: 1123 SEIFAWGYTNNYHLCIGI 1140
Score = 152 (58.6 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 52/201 (25%), Positives = 89/201 (44%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
K V+ S G HS A + G++Y WG NG+LGLG I K + + G+ K+
Sbjct: 438 KNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGN-----IKSYNKPQLIKGLRNKR 492
Query: 182 ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-G 237
G S + V +WG G +LGHG + + Y P+L++ L
Sbjct: 493 ILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDI--------YYPKLVECLNHN 544
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
KV + + G +S ++ G VY++G + + ++ P I+ Y +
Sbjct: 545 KKVCMLSFGCFNSLALNVKGDVYVWGTFNITNN-YVNYYISKLPKQINT-NYKCISIHAS 602
Query: 298 YHTCV-LTSGGELYTWGSNEN 317
+ C +T G+L ++G+ +N
Sbjct: 603 TYVCFGITLVGDLISFGNYKN 623
Score = 136 (52.9 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 44/143 (30%), Positives = 73/143 (51%)
Query: 68 FEKHSL--KA---LACGGAH-TLFLTETGCVYATGLNDFGQLGISE-NIGYSLE-PLRIS 119
FEK+ L K+ + G H ++FL E+G VY G N G+LG E N+ P+ ++
Sbjct: 743 FEKNKLVLKSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN 802
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
++++I+ GY++ ++ G +Y WGKN QLG+G K P V+ L+ +
Sbjct: 803 ICVNKIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIG--VIKDFYEPVHVKNLTNVIN 860
Query: 180 KQAALGFEQSVAVTGGGKVLSWG 202
A G++ S + K+L G
Sbjct: 861 IFA--GYDHSACIIN--KLLDKG 879
Score = 130 (50.8 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 46/141 (32%), Positives = 63/141 (44%)
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-K 123
CSA KHSL AC H G +Y+ G G+LG+ Y+ +P I GL+ K
Sbjct: 444 CSAGSKHSL---ACN-LH-------GDIYSWGYGGNGRLGLGNIKSYN-KPQLIKGLRNK 491
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
++ + G HS I + +Y WG +LG G + P VECL+ K
Sbjct: 492 RILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIY-YPKLVECLNHN-KKVCM 549
Query: 184 LGFE--QSVAVTGGGKVLSWG 202
L F S+A+ G V WG
Sbjct: 550 LSFGCFNSLALNVKGDVYVWG 570
Score = 126 (49.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GRLGLG+++S +P + + + G +H+ + VY G F +
Sbjct: 463 WGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYK 522
Query: 103 LGI-SENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
LG +++I Y + + K+V +S G +S A+ V G++Y+WG
Sbjct: 523 LGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 123 (48.4 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 42/134 (31%), Positives = 64/134 (47%)
Query: 123 KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGK-KAAKVIPIPTKVE-CLSGIFT 179
K V+I G H S ++ G++Y G N NG+LG G+ K +P + C++ I
Sbjct: 751 KSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKII- 809
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ A G+ + V+ G V WG +LG +G ++ Y P +K L V
Sbjct: 810 -KIACGYNYVLCVSDVGLVYGWGKNDKSQLG-------IGVIKDF--YEPVHVKNLTNV- 858
Query: 240 VKIAAAGFLHSACI 253
+ I A G+ HSACI
Sbjct: 859 INIFA-GYDHSACI 871
Score = 94 (38.1 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ CG HT + +GG LY+WG N GC+G G
Sbjct: 354 ISCGDMHTLAICTGGVLYSWGYNNFGCIGNG 384
Score = 89 (36.4 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 34/118 (28%), Positives = 51/118 (43%)
Query: 127 QISTGYHHSSAITV---DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQ 181
+ISTG H + + ++ WG NS QLGLG + + PT V C S I
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINN-RFVNNPTVV-CFFDSFIVASI 78
Query: 182 AALGFEQSVAVTG-----GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
+ V V G V S+G G +G LG+ ++ + FL + + +KE
Sbjct: 79 CCTNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKKKRELPNFLEHEEKKNIQKVKE 136
Score = 75 (31.5 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---PSLISKLPYSE-EVV 294
KVKI S + E+G+VY G ++ E N ++ P L++ ++
Sbjct: 753 KVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIA 812
Query: 295 CG-GYHTCVLTSGGELYTWGSNENGCLGIG 323
CG Y CV + G +Y WG N+ LGIG
Sbjct: 813 CGYNYVLCV-SDVGLVYGWGKNDKSQLGIG 841
Score = 67 (28.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLT-----ETGC-VYA 94
WG +LGLG + +R+ P V F+ + ++ C T L + GC VY+
Sbjct: 44 WGGNSCNQLGLG-INNRFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSVYS 102
Query: 95 TGLNDFGQLG 104
G + G LG
Sbjct: 103 FGKGNNGLLG 112
Score = 58 (25.5 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 307 GELYTWGSNENGCLGIG 323
G+LY WG+ E+G +G+G
Sbjct: 905 GDLYIWGNAESGKVGLG 921
Score = 43 (20.2 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
WG ++G +G G+ ++ + P E HS+
Sbjct: 373 WGYNNFGCIGNGTNQNVYEPTPIF-LEPHSV 402
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 167 (63.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 65/258 (25%), Positives = 118/258 (45%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQ--LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
G + E G +Y G + G+ LG+ G L P +I+ + K + + S G HS
Sbjct: 895 GVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINK-IYKCSLGNSHSLF 953
Query: 138 ITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+T ELY+ G N+NG+LGL +K+ ++ +PTKV + I+ K G S+ ++
Sbjct: 954 LTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKVILHNNIYIKDILAGNTYSIILSV 1013
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G + +G G G+ S S Y E VK + H +
Sbjct: 1014 DGFIYIFGEFIKGSNGNSNNMSC----EVISLYN-------EITNVKYMNGKYEHVFFLT 1062
Query: 255 ENGRVYIFGDRAVDKMLF---QEGNHARRPSLISK-LPYSEEVVCG--GYH--TCVLTSG 306
+ +++ G+ ++L +E N+ ++P LI+ L + +++ +H T + +
Sbjct: 1063 YDNKLFGIGNNKNCQILCDNEKENNYIKKPKLITYFLKENNKIIESIFSFHNVTFIQFNN 1122
Query: 307 GELYTWG--SNENGCLGI 322
E++ WG +N + C+GI
Sbjct: 1123 SEIFAWGYTNNYHLCIGI 1140
Score = 152 (58.6 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 52/201 (25%), Positives = 89/201 (44%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
K V+ S G HS A + G++Y WG NG+LGLG I K + + G+ K+
Sbjct: 438 KNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRLGLGN-----IKSYNKPQLIKGLRNKR 492
Query: 182 ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-G 237
G S + V +WG G +LGHG + + Y P+L++ L
Sbjct: 493 ILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDI--------YYPKLVECLNHN 544
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
KV + + G +S ++ G VY++G + + ++ P I+ Y +
Sbjct: 545 KKVCMLSFGCFNSLALNVKGDVYVWGTFNITNN-YVNYYISKLPKQINT-NYKCISIHAS 602
Query: 298 YHTCV-LTSGGELYTWGSNEN 317
+ C +T G+L ++G+ +N
Sbjct: 603 TYVCFGITLVGDLISFGNYKN 623
Score = 136 (52.9 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 44/143 (30%), Positives = 73/143 (51%)
Query: 68 FEKHSL--KA---LACGGAH-TLFLTETGCVYATGLNDFGQLGISE-NIGYSLE-PLRIS 119
FEK+ L K+ + G H ++FL E+G VY G N G+LG E N+ P+ ++
Sbjct: 743 FEKNKLVLKSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN 802
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
++++I+ GY++ ++ G +Y WGKN QLG+G K P V+ L+ +
Sbjct: 803 ICVNKIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIG--VIKDFYEPVHVKNLTNVIN 860
Query: 180 KQAALGFEQSVAVTGGGKVLSWG 202
A G++ S + K+L G
Sbjct: 861 IFA--GYDHSACIIN--KLLDKG 879
Score = 130 (50.8 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 46/141 (32%), Positives = 63/141 (44%)
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-K 123
CSA KHSL AC H G +Y+ G G+LG+ Y+ +P I GL+ K
Sbjct: 444 CSAGSKHSL---ACN-LH-------GDIYSWGYGGNGRLGLGNIKSYN-KPQLIKGLRNK 491
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
++ + G HS I + +Y WG +LG G + P VECL+ K
Sbjct: 492 RILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIY-YPKLVECLNHN-KKVCM 549
Query: 184 LGFE--QSVAVTGGGKVLSWG 202
L F S+A+ G V WG
Sbjct: 550 LSFGCFNSLALNVKGDVYVWG 570
Score = 126 (49.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GRLGLG+++S +P + + + G +H+ + VY G F +
Sbjct: 463 WGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCIDSNYNVYTWGNGKFYK 522
Query: 103 LGI-SENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
LG +++I Y + + K+V +S G +S A+ V G++Y+WG
Sbjct: 523 LGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 123 (48.4 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 42/134 (31%), Positives = 64/134 (47%)
Query: 123 KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGK-KAAKVIPIPTKVE-CLSGIFT 179
K V+I G H S ++ G++Y G N NG+LG G+ K +P + C++ I
Sbjct: 751 KSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKII- 809
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ A G+ + V+ G V WG +LG +G ++ Y P +K L V
Sbjct: 810 -KIACGYNYVLCVSDVGLVYGWGKNDKSQLG-------IGVIKDF--YEPVHVKNLTNV- 858
Query: 240 VKIAAAGFLHSACI 253
+ I A G+ HSACI
Sbjct: 859 INIFA-GYDHSACI 871
Score = 94 (38.1 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ CG HT + +GG LY+WG N GC+G G
Sbjct: 354 ISCGDMHTLAICTGGVLYSWGYNNFGCIGNG 384
Score = 89 (36.4 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 34/118 (28%), Positives = 51/118 (43%)
Query: 127 QISTGYHHSSAITV---DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQ 181
+ISTG H + + ++ WG NS QLGLG + + PT V C S I
Sbjct: 21 KISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINN-RFVNNPTVV-CFFDSFIVASI 78
Query: 182 AALGFEQSVAVTG-----GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
+ V V G V S+G G +G LG+ ++ + FL + + +KE
Sbjct: 79 CCTNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKKKRELPNFLEHEEKKNIQKVKE 136
Score = 75 (31.5 bits), Expect = 3.1e-07, Sum P(3) = 3.1e-07
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---PSLISKLPYSE-EVV 294
KVKI S + E+G+VY G ++ E N ++ P L++ ++
Sbjct: 753 KVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIA 812
Query: 295 CG-GYHTCVLTSGGELYTWGSNENGCLGIG 323
CG Y CV + G +Y WG N+ LGIG
Sbjct: 813 CGYNYVLCV-SDVGLVYGWGKNDKSQLGIG 841
Score = 67 (28.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 21/70 (30%), Positives = 32/70 (45%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLT-----ETGC-VYA 94
WG +LGLG + +R+ P V F+ + ++ C T L + GC VY+
Sbjct: 44 WGGNSCNQLGLG-INNRFVNNPTVVCFFDSFIVASICCTNYATFVLVKKNVNDIGCSVYS 102
Query: 95 TGLNDFGQLG 104
G + G LG
Sbjct: 103 FGKGNNGLLG 112
Score = 58 (25.5 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 307 GELYTWGSNENGCLGIG 323
G+LY WG+ E+G +G+G
Sbjct: 905 GDLYIWGNAESGKVGLG 921
Score = 43 (20.2 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
WG ++G +G G+ ++ + P E HS+
Sbjct: 373 WGYNNFGCIGNGTNQNVYEPTPIF-LEPHSV 402
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 179 (68.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 59/185 (31%), Positives = 87/185 (47%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG N+N LG G + +K P + SGI+ KQ L SV ++ G+V + G
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGPGGRLGHGDEQTCL---------VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 GDRAVDKM-LFQEGNHARRPSLI-SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN-- 315
G ++ + + P I +K ++ G +HT VL + +YT G N
Sbjct: 254 GLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNGG 312
Query: 316 ENGCL 320
+ GCL
Sbjct: 313 QLGCL 317
Score = 159 (61.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 72/286 (25%), Positives = 118/286 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + + K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G G+LG +L
Sbjct: 266 PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLG-----CLL 318
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
PR + L + + + + AA + C+ G +Y+ D KM ++ N
Sbjct: 319 DPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMASKQLN 378
Query: 277 HARRPSLIS--KLPYS---EEVV-CGGYHTCVLT--SGGELYTWGS 314
+ L+S + Y E + GG C+L G ++ W S
Sbjct: 379 --LKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCWRS 422
Score = 156 (60.0 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 70/243 (28%), Positives = 106/243 (43%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + H+ +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 104 GI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
GI S N+ ++ + G + ++ ++ G H+ T + +Y G N GQLG
Sbjct: 262 GIIPPPSSCNVPRQIQAKYLKG--RTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGCL 317
Query: 157 LGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L K + P +V L I A +V VT G + ++ ++
Sbjct: 318 LDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMA-SKQ 376
Query: 215 SSILGFLRSTS--EYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
++ L S EY P +KE G K+ I A +D GRV+ + R+V+
Sbjct: 377 LNLKKVLVSGGHMEYKVDPEHLKENGGQKICILA--------MDGAGRVFCW--RSVNSS 426
Query: 271 LFQ 273
L Q
Sbjct: 427 LKQ 429
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 148 (57.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 49/158 (31%), Positives = 73/158 (46%)
Query: 59 RWRPVVCSAF-EKHSLKA----LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
RW+ CS EK L A G H L L E G VY+ G + + L
Sbjct: 15 RWQGYFCSVSPEKLLLSRPVLHAALGSLHGLLLIEGGQVYSFGEQPWKPVE-PPPASLVL 73
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
E +SG + V+ +S G +H SA+T DG + MWG+NS GQ G+ +P PT V
Sbjct: 74 EST-LSG--QHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVS--GTDRVPSPTPVTV 128
Query: 174 LSG-------IFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + A G + ++A++ +V +WG+G
Sbjct: 129 VDDETHPPQLVRVLNVACGAQHTLALSNKHEVWAWGSG 166
Score = 127 (49.8 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKN 150
V++ G GQLG + + L+PL I L KKEVV+I+ G +HS A+T ++Y WG
Sbjct: 522 VWSWGKGHEGQLGHGDYLP-RLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSE 580
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
GQLG + +P T V GI A G ++ + G
Sbjct: 581 KFGQLGR-MNSPSTVPNLTTVS--DGIRVWDVAAGQTHTLLLADG 622
Score = 108 (43.1 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 42/144 (29%), Positives = 65/144 (45%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
R S L+ V+ ST + ++ E++ WGK GQLG G ++ P+ K LS
Sbjct: 497 RTSNLR--AVRASTSESRNLLPSLFTEVWSWGKGHEGQLGHGDYLPRLQPLCIK--SLSK 552
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ G S+A+T +V SWG+ G+LG + S S P L +
Sbjct: 553 KEVVKITAGANHSLALTAQCQVYSWGSEKFGQLGR---------MNSPST-VPNLTTVSD 602
Query: 237 GVKVKIAAAGFLHSACIDENGRVY 260
G++V AAG H+ + + G Y
Sbjct: 603 GIRVWDVAAGQTHTLLLAD-GDCY 625
Score = 100 (40.3 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 35/115 (30%), Positives = 53/115 (46%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLES--RWRPVVCSAFEKHS---LKAL--ACGGAHTL 84
S+ + +WG YG+ G+ + PV E H ++ L ACG HTL
Sbjct: 93 SAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACGAQHTL 152
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
L+ V+A G QLG+ N+ +P ++ L + VVQI+ G HS A+
Sbjct: 153 ALSNKHEVWAWGSGC--QLGLVTNVFPVWKPQKVEHLVGRYVVQIACGAFHSLAL 205
Score = 81 (33.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 33/112 (29%), Positives = 48/112 (42%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V SWG G G+LGHG +L P IK L +V AG HS +
Sbjct: 521 EVWSWGKGHEGQLGHGD------YL---PRLQPLCIKSLSKKEVVKITAGANHSLALTAQ 571
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVVCGGYHTCVLTSG 306
+VY +G + L + + + P+L +S +V G HT +L G
Sbjct: 572 CQVYSWGSEKFGQ-LGRMNSPSTVPNLTTVSDGIRVWDVAAGQTHTLLLADG 622
Score = 68 (29.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+P I L E ++ G H+ LT+ ++Y+WGS + G LG
Sbjct: 543 QPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEKFGQLG 586
Score = 50 (22.7 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 43 WGNGDYGRLGL-GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
WG+G +LGL ++ W+P + +ACG H+L L +
Sbjct: 163 WGSGC--QLGLVTNVFPVWKPQKVEHLVGRYVVQIACGAFHSLALVQ 207
Score = 42 (19.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 308 ELYTWGSNENGCLGIG 323
E+++WG G LG G
Sbjct: 521 EVWSWGKGHEGQLGHG 536
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 179 (68.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 59/185 (31%), Positives = 87/185 (47%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG N+N LG G + +K P + SGI+ KQ L SV ++ G+V + G
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGPGGRLGHGDEQTCL---------VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 GDRAVDKM-LFQEGNHARRPSLI-SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN-- 315
G ++ + + P I +K ++ G +HT VL + +YT G N
Sbjct: 254 GLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNGG 312
Query: 316 ENGCL 320
+ GCL
Sbjct: 313 QLGCL 317
Score = 159 (61.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 72/286 (25%), Positives = 118/286 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + + K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G G+LG +L
Sbjct: 266 PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLG-----CLL 318
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
PR + L + + + + AA + C+ G +Y+ D KM ++ N
Sbjct: 319 DPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMASKQLN 378
Query: 277 HARRPSLIS--KLPYS---EEVV-CGGYHTCVLT--SGGELYTWGS 314
+ L+S + Y E + GG C+L G ++ W S
Sbjct: 379 --LKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCWRS 422
Score = 156 (60.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 70/243 (28%), Positives = 106/243 (43%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + H+ +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 104 GI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
GI S N+ ++ + G + ++ ++ G H+ T + +Y G N GQLG
Sbjct: 262 GIIPPPSSCNVPRQIQAKYLKG--RTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGCL 317
Query: 157 LGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L K + P +V L I A +V VT G + ++ ++
Sbjct: 318 LDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMA-SKQ 376
Query: 215 SSILGFLRSTS--EYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
++ L S EY P +KE G K+ I A +D GRV+ + R+V+
Sbjct: 377 LNLKKVLVSGGHMEYKVDPEHLKENGGQKICILA--------MDGAGRVFCW--RSVNSS 426
Query: 271 LFQ 273
L Q
Sbjct: 427 LKQ 429
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 179 (68.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 59/185 (31%), Positives = 87/185 (47%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG N+N LG G + +K P + SGI+ KQ L SV ++ G+V + G
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGPGGRLGHGDEQTCL---------VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 GDRAVDKM-LFQEGNHARRPSLI-SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN-- 315
G ++ + + P I +K ++ G +HT VL + +YT G N
Sbjct: 254 GLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLNGG 312
Query: 316 ENGCL 320
+ GCL
Sbjct: 313 QLGCL 317
Score = 159 (61.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 72/286 (25%), Positives = 118/286 (41%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + + K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G G+LG +L
Sbjct: 266 PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLG-----CLL 318
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
PR + L + + + + AA + C+ G +Y+ D KM ++ N
Sbjct: 319 DPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMASKQLN 378
Query: 277 HARRPSLIS--KLPYS---EEVV-CGGYHTCVLT--SGGELYTWGS 314
+ L+S + Y E + GG C+L G ++ W S
Sbjct: 379 --LKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCWRS 422
Score = 156 (60.0 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 70/243 (28%), Positives = 106/243 (43%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + H+ +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 104 GI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
GI S N+ ++ + G + ++ ++ G H+ T + +Y G N GQLG
Sbjct: 262 GIIPPPSSCNVPRQIQAKYLKG--RTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGCL 317
Query: 157 LGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L K + P +V L I A +V VT G + ++ ++
Sbjct: 318 LDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMA-SKQ 376
Query: 215 SSILGFLRSTS--EYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
++ L S EY P +KE G K+ I A +D GRV+ + R+V+
Sbjct: 377 LNLKKVLVSGGHMEYKVDPEHLKENGGQKICILA--------MDGAGRVFCW--RSVNSS 426
Query: 271 LFQ 273
L Q
Sbjct: 427 LKQ 429
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 178 (67.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 78/286 (27%), Positives = 122/286 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + + K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A +P + + L G A G +V T V + G G G+LGH + +
Sbjct: 266 PPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNG-GQLGHLLDPN-- 321
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G T TPR + L + + V + AA + C+ G +Y+ D KM ++ N
Sbjct: 322 GEKCVT---TPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIYLLADYQCKKMATKQLN 378
Query: 277 HARRPSLISK--LPYS---EEVV-CGGYHTCVLT--SGGELYTWGS 314
+ L+S + Y E + GG CVL G ++ W S
Sbjct: 379 --LKKVLVSGGCMEYKVDPEHLTENGGQKICVLAMDGAGRVFCWRS 422
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 58/184 (31%), Positives = 85/184 (46%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y WG N+N LG G + +K P + SG++ KQ L SV ++ G+V + G
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + ++G VY F
Sbjct: 203 HGRGGRLGHGDEQTCL---------VPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTF 253
Query: 263 GDRAVDKM-LFQEGNHARRPSLI-SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNEN 317
G ++ + P I +K ++ G +HT VL + +YT G N
Sbjct: 254 GLNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTLGLN-G 311
Query: 318 GCLG 321
G LG
Sbjct: 312 GQLG 315
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 155 (59.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 65/220 (29%), Positives = 100/220 (45%)
Query: 121 LKKEVVQISTGYHHSSAI-----------TVDGELYMWGKNSNGQLGL---GKKAAKVIP 166
L+K++ ISTG+ SAI T +G++Y GK + LG+ G A K +
Sbjct: 478 LEKDLHIISTGFDEESAILGAGREFALMKTANGKIYYTGKYQS--LGIKQGGPSAGKWVE 535
Query: 167 IP-TKVECLSGIFTKQAALGFEQSVA--VTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P TK + ++G + S A V G V G+ G G +S R
Sbjct: 536 LPITKSPKIVHF-----SVGHDGSHALLVAEDGSVFFTGSASKGEDGESTKSR-----RQ 585
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
+ Y P+ I ++EG V A S+ I ++G +Y+FG A+ ++ SL
Sbjct: 586 SKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI---------YSDSSSL 636
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+S L + +V G HTCVL GE++T+G N G G
Sbjct: 637 VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 46/157 (29%), Positives = 74/157 (47%)
Query: 56 LESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
LE P+V + F H +ALA +H L + G D G+ S+ Y
Sbjct: 834 LEDGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRDKHKDGSGDRGEKDASKITTYPP 893
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+R + VQ+S G+HHS + +G++Y +G +GQLG G ++ PT V+
Sbjct: 894 GSVRFD-CELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSR--GCPTLVQA 950
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L G T+ A +V + G +V ++G+ G+LG
Sbjct: 951 LPGPSTQVTACSNHTAVLLMDG-QVFTFGSFSKGQLG 986
Score = 122 (48.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 41/121 (33%), Positives = 57/121 (47%)
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYI 261
GSG G S I + Y P ++ EL V+V + GF HS + ENG VY
Sbjct: 876 GSGDRGEKDASKI-------TTYPPGSVRFDCELRAVQV---SCGFHHSVVLMENGDVYT 925
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPY-SEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
FG ++ + N P+L+ LP S +V HT VL G+++T+GS G L
Sbjct: 926 FGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTACSNHTAVLLMDGQVFTFGSFSKGQL 985
Query: 321 G 321
G
Sbjct: 986 G 986
Score = 117 (46.2 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 46/176 (26%), Positives = 77/176 (43%)
Query: 42 LWGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
++ G Y LG+ G +W + + K ++ G+H L + E G V+ TG
Sbjct: 512 IYYTGKYQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSA 571
Query: 99 DFGQLGISENIGYSLEPLRISGL-KKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G S +P + + K E VV + SS I+ DGELYM+GK++
Sbjct: 572 SKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDA--- 628
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ ++ + V L G F Q A+G + + G+V ++G G+ G
Sbjct: 629 --IYSDSSSL------VSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 106 (42.4 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 35/118 (29%), Positives = 57/118 (48%)
Query: 149 KNSNGQLGLGKKAAKVIPIP---TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K+ +G G K A+K+ P + +C + Q + GF SV + G V ++G G
Sbjct: 874 KDGSGDRG-EKDASKITTYPPGSVRFDC--ELRAVQVSCGFHHSVVLMENGDVYTFGYGQ 930
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGHG +S R P L++ L G ++ A H+A + +G+V+ FG
Sbjct: 931 HGQLGHGDVNS-----RGC----PTLVQALPGPSTQVTACSN-HTAVLLMDGQVFTFG 978
Score = 78 (32.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +H+ VL G++YT+G ++G LG G
Sbjct: 906 QVSCGFHHSVVLMENGDVYTFGYGQHGQLGHG 937
Score = 71 (30.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 12 YYLKQDIKLGSKLGI---CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF 68
Y K+ IK+ K+ + C SS + + +G+ G ++ S +V S
Sbjct: 589 YKPKKIIKMEGKIVVYTACNNGSSSVISK-------DGELYMFGKDAIYSDSSSLV-SDL 640
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+ H + +A G AHT L + G V+ G+N+ GQ G
Sbjct: 641 KGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 176 (67.0 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 59/184 (32%), Positives = 86/184 (46%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG N+N LG G + +K P + SGI+ KQ L SV ++ G+V + G
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGPGGRLGHGDEQTCL---------VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 GDRAVDKM-LFQEGNHARRP-SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNEN 317
G ++ L + P + +K ++ G +HT VL + +YT G N
Sbjct: 254 GLNIFHQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTMGLN-G 311
Query: 318 GCLG 321
G LG
Sbjct: 312 GQLG 315
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 73/286 (25%), Positives = 122/286 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + + K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLGL
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGLIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G G+LG+ + +
Sbjct: 266 PPSSCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGYLLDPN-- 321
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G T+ PR + L + + + + AA + C+ G +Y+ D K+ ++ N
Sbjct: 322 GEKCVTA---PRQVSALHHKDITLSLVAASDGATVCVTTKGDIYLLADYQCKKLASKQLN 378
Query: 277 HARRPSLIS--KLPYS---EEVV-CGGYHTCVLT--SGGELYTWGS 314
+ L+S + Y E + GG C+L G ++ W S
Sbjct: 379 --LKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCWRS 422
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 69/243 (28%), Positives = 106/243 (43%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + H+ +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 104 GI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
G+ S N+ ++ + G + ++ ++ G H+ T + +Y G N GQLG
Sbjct: 262 GLIPPPSSCNVPRQMQAKYLKG--RTIIGVAAGRFHTVLWTREA-VYTMGLNG-GQLGYL 317
Query: 157 LGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L K + P +V L I A +V VT G + +L ++
Sbjct: 318 LDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCVTTKGDIYLLADYQCKKLA-SKQ 376
Query: 215 SSILGFLRSTS--EYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
++ L S EY P +KE G K+ I A +D GRV+ + R+V+
Sbjct: 377 LNLKKVLVSGGHMEYKVDPEHLKENGGQKICILA--------MDGAGRVFCW--RSVNSS 426
Query: 271 LFQ 273
+ Q
Sbjct: 427 MKQ 429
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 173 (66.0 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 29 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 88
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 89 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHT 147
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 148 CNVKCPSPVK 157
Score = 155 (59.6 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 42/130 (32%), Positives = 68/130 (52%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
G V+ G+N+ GQLG+S+ P + L+ ++VV IS G H++ +T G ++ +G
Sbjct: 24 GAVFGWGMNNAGQLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSG 207
S GQLG +V P +V L G Q A G + ++A V G + ++G G G
Sbjct: 83 AGSCGQLGHDSMNDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKG 140
Query: 208 RLGHGQESSI 217
+LG G ++
Sbjct: 141 QLGTGHTCNV 150
Score = 136 (52.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+G ++ WG N+ GQLGL + + P K+ + + G E + +T G V +
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVV--YISCGEEHTAVLTKSGGVFT 80
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRV 259
+GAG G+LGH + E PR + EL G +V A G H+ A + +G +
Sbjct: 81 FGAGSCGQLGHDSMND---------EVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 131
Query: 260 YIFG 263
Y FG
Sbjct: 132 YAFG 135
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V WG +G+LG E +P +K L KV + G H+A + +
Sbjct: 24 GAVFGWGMNNAGQLGLSDEED---------RESPCHVKLLRTQKVVYISCGEEHTAVLTK 74
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTW 312
+G V+ FG + ++ N P + +L SE ++ CG HT S G +Y +
Sbjct: 75 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 134
Query: 313 GSNENGCLGIG 323
G G LG G
Sbjct: 135 GCGAKGQLGTG 145
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 134 (52.2 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 45/139 (32%), Positives = 68/139 (48%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP--LRIS 119
P++ SA + +A G HT +T++G VY G N GQ ++ N Y EP + IS
Sbjct: 87 PILESALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVA-NQPYVPEPNPVSIS 145
Query: 120 G------LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
L ++Q++ G H+ A+++ E++ WG QLGL V P KVE
Sbjct: 146 DSETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTK-PQKVEH 202
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 203 LAGRVVLQVACGAFHSLAL 221
Score = 132 (51.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 51/186 (27%), Positives = 79/186 (42%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL--EPLRISGLKKE-VVQISTGYH 133
A G H + LTE + FG L + P+ S L + VV ++TG
Sbjct: 47 ALGVKHGVLLTEVFKPSDGEVYSFGTLPWRSEPAETCPSNPILESALVGQYVVTVATGSF 106
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-----LSGIFTKQAALGFEQ 188
H+ A+T G +YMWG+NS GQ + + P P + L + Q A G E
Sbjct: 107 HTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQLACGEEH 166
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGF 247
++A++ ++ +WG G LG + +T T P+ ++ L G V A G
Sbjct: 167 TLALSLSREIWAWGTGCQ-----------LGLITTTFPVTKPQKVEHLAGRVVLQVACGA 215
Query: 248 LHSACI 253
HS +
Sbjct: 216 FHSLAL 221
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 37/115 (32%), Positives = 57/115 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG H+L LT VY+ G N FGQ
Sbjct: 535 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ 594
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
LG S+ + R++ + E V ++ G +S + VD E + G +G+L
Sbjct: 595 LGHSD---FPTTVPRLAKVNSENGVWSVAAGQDYSLFL-VDTEDFQPGLCYSGRL 645
Score = 92 (37.4 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-----NGR 258
GGS RL S+ G L S+ +PRL+++ VK + +S D
Sbjct: 481 GGSRRL------SLPGLL---SQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTE 531
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
V+ +G + + L R L K +EV+ GGYH+ LT+ ++Y+WGSN
Sbjct: 532 VWTWG-KGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 590
Query: 316 ENGCLG 321
G LG
Sbjct: 591 TFGQLG 596
Score = 47 (21.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 308 ELYTWGSNENGCLGIG 323
E++TWG + G LG G
Sbjct: 531 EVWTWGKGKEGQLGHG 546
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 62/246 (25%), Positives = 100/246 (40%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
+K +A G +T LTE G +Y G+N+ G+LG+ + I P R+ LK EVV I+
Sbjct: 416 VKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRT-PTRVIRLKNEVVSTIACS 474
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS+ T G++Y+WG++ GK A IP P + K G
Sbjct: 475 STHSACYTESGKMYVWGQSDE----TGKIQA--IPSPLPIHSYLDREIKSPNGGGVGGF- 527
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
GGGK+ G Q + F+ L LE V+ G H
Sbjct: 528 FGGGGKIKQLACGQRCIAVLTQMGEV--FMWEIPGIPIPLRNALENHSVRNIVMGNFHLV 585
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
C+ ++G V G ++ + + P ++ +L + + + V + GE ++
Sbjct: 586 CLTDSGEVVTIGRNKTGQLGRTDAEN--EPGIVKQLSFDPDGL-NSDEFVVSIAAGEFHS 642
Query: 312 WGSNEN 317
EN
Sbjct: 643 VALVEN 648
Score = 152 (58.6 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 64/210 (30%), Positives = 88/210 (41%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
K V I+TG +++A+T GELYMWG N +G+LGLG + PT+V L
Sbjct: 414 KCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDR--RTPTRVIRLKNEVVSTI 471
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV---- 238
A S T GK+ WG G+ +I L S Y R IK G
Sbjct: 472 ACSSTHSACYTESGKMYVWGQSDET----GKIQAIPSPLPIHS-YLDREIKSPNGGGVGG 526
Query: 239 ------KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISKLPYSE 291
K+K A G A + + G V+++ + L NH+ R
Sbjct: 527 FFGGGGKIKQLACGQRCIAVLTQMGEVFMWEIPGIPIPLRNALENHSVR----------- 575
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+V G +H LT GE+ T G N+ G LG
Sbjct: 576 NIVMGNFHLVCLTDSGEVVTIGRNKTGQLG 605
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 58/229 (25%), Positives = 97/229 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND-F 100
+WG ++G LGLG R P + + +AC H+ TE+G +Y G +D
Sbjct: 437 MWGINEHGELGLGDTIDRRTPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQSDET 496
Query: 101 GQL-GISENI---GYSLEPLR------ISGL---KKEVVQISTGYHHSSAITVDGELYMW 147
G++ I + Y ++ + G ++ Q++ G + +T GE++MW
Sbjct: 497 GKIQAIPSPLPIHSYLDREIKSPNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMW 556
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G IPIP + L + +G V +T G+V++ G +G
Sbjct: 557 --EIPG-----------IPIPLR-NALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTG 602
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+LG + G ++ S + P + E V V IAA F HS + EN
Sbjct: 603 QLGRTDAENEPGIVKQLS-FDPDGLNSDEFV-VSIAAGEF-HSVALVEN 648
Score = 102 (41.0 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
S L ++V G YH +LT GG ++TWGSN NG LG
Sbjct: 330 SPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 96 (38.9 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 228 TPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP++++ +K VK A G ++A + E G +Y++G ++ + R P+ + +
Sbjct: 407 TPKMVE----IKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRRTPTRVIR 462
Query: 287 LPYS--EEVVCGGYHTCVLTSGGELYTWG-SNENG 318
L + C H+ T G++Y WG S+E G
Sbjct: 463 LKNEVVSTIACSSTHSACYTESGKMYVWGQSDETG 497
Score = 85 (35.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 105 ISENIGYSLEPLRISG--LKKE----VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ E+ P+RIS L+ + Q++ G +H +T G ++ WG NSNGQLG
Sbjct: 309 LDEDPNIHFTPIRISTHFLENSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
Score = 84 (34.6 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G +T LT GELY WG NE+G LG+G
Sbjct: 419 IATGVKNTAALTEWGELYMWGINEHGELGLG 449
Score = 79 (32.9 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 33/130 (25%), Positives = 59/130 (45%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEK--HSLKALACGGAHTLFLTETGCVYATGLN 98
+G+G G LGLG + ++ P + F + +K +ACG HT+F+T+ +Y G+
Sbjct: 6 FGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYICGIK 65
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG---ELYMWGKNSNGQL 155
+ G + + Y+ P + +T ++ T +G E KN+NG+
Sbjct: 66 KDPKHGTT--LFYTSPPPTTT-----TTTTTTSSTSATTTTTNGMVNEKNNNNKNNNGEK 118
Query: 156 GLGKKAAKVI 165
+ K VI
Sbjct: 119 IVNSKPESVI 128
Score = 77 (32.2 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
KQ ALG V +T GG V +WG+ +G+LG+
Sbjct: 336 KQVALGNYHIVLLTEGGNVWTWGSNSNGQLGY 367
Score = 73 (30.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 20/52 (38%), Positives = 26/52 (50%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF--TKQAALGFEQSVAVT 193
++ +G SNG LGLGK P P KV + I K+ A G +V VT
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVT 54
Score = 71 (30.1 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
+++K +A G H + LTE G V+ G N GQLG
Sbjct: 333 NTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLG 366
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 174 (66.3 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 57/184 (30%), Positives = 87/184 (47%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG N+N LG G + +K P + SG++ KQ L SV ++ G+V + G
Sbjct: 143 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGPGGRLGHGDEQTCL---------VPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 GDRAVDKM-LFQEGNHARRP-SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNEN 317
G ++ + ++ P + +K ++ G +HT VL + +YT G N
Sbjct: 254 GLNIFHQLGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFHT-VLWTREAVYTLGLN-G 311
Query: 318 GCLG 321
G LG
Sbjct: 312 GQLG 315
Score = 168 (64.2 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 74/286 (25%), Positives = 122/286 (42%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + +K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G G+LGH + S
Sbjct: 266 PPSNCNVPRQMQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNG-GQLGHLLDPS-- 321
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
G T+ PR + L + + + + AA + C+ G +Y+ D K+ ++ N
Sbjct: 322 GEKCVTA---PRQVSALHHKDIALSLVAASDGATVCVTARGDIYLLADYQCKKLASKQLN 378
Query: 277 HARRPSLIS--KLPYS---EEVV-CGGYHTCVLT--SGGELYTWGS 314
+ L+S + Y E + GG C+L G ++ W S
Sbjct: 379 --LKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDGAGRVFCWRS 422
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 174 (66.3 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 67/260 (25%), Positives = 113/260 (43%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGC--VYATGLNDFGQLGISENIGYSLEPLRIS 119
P F + + + H++ LT+ VY G+ G++G + ++ Y+ P I
Sbjct: 186 PTSGQLFSRDKILDVQASKFHSVVLTDEPSQNVYVCGIGAGGRIGFNTDVQYNFIP--IP 243
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-KAAKVIPI---PTKVECLS 175
G+ +V+QIS + HS A+T G +Y WGKN +G+LGL + K PI P ++
Sbjct: 244 GIIHKVIQISVSHTHSLALTKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFK 303
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
A G SVA T + SWG +G+LG S++ TPR + L
Sbjct: 304 DYQIIGMAAGKSYSVAWTDTD-IYSWGLN-NGQLGISDHISVVS--------TPRRVAGL 353
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--GNH---ARRPSLISKLPYS 290
+ A + C+ +N + F + K+ F G+ + P +++
Sbjct: 354 LSPVIH-AVCTTRATICLLQNNSIIAFCNYNQVKLPFNVDFGSSLKVTKHPLSLTRFNV- 411
Query: 291 EEVVCGGYHTCVLTSGGELY 310
+++ VLT GE+Y
Sbjct: 412 RKLLASENKLAVLTELGEVY 431
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 151 (58.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQI 128
K L+A A G H + LTE G VY+ G + + +E S PL S L VV +
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPW-KSEAAEICPSS--PLLESALVGHHVVTV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-----LSGIFTKQAA 183
+TG HS A+T G +YMWG+N+ GQ + + P P + L + Q A
Sbjct: 97 ATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLA 156
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKI 242
G E ++A++ ++ +WG G LG + +T T P+ ++ L G V
Sbjct: 157 CGEEHTLALSISREIWAWGTGCQ-----------LGLITTTFPVTKPQKVEHLAGRVVLQ 205
Query: 243 AAAGFLHSACI 253
A G HS +
Sbjct: 206 VACGAFHSLAL 216
Score = 141 (54.7 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 45/139 (32%), Positives = 68/139 (48%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P++ SA H + +A G H+ +TE+G VY G N GQ ++ N Y EP +S
Sbjct: 82 PLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVA-NQQYVSEPSPVSIS 140
Query: 122 KKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
E ++Q++ G H+ A+++ E++ WG QLGL V P KVE
Sbjct: 141 DSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 135 (52.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 39/114 (34%), Positives = 56/114 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG+H+L LT VY+ G N FGQ
Sbjct: 525 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQ 584
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG SE + R+S + E V ++ G H S VD E + G +G+
Sbjct: 585 LGHSE---FPTTVPRLSKVSSESGVWSVAAG-HGYSLFLVDTEDFQPGLYYSGR 634
Score = 131 (51.2 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKN 150
V+ G GQLG + + L+PL + L KEV+ + G HS A+T ++Y WG N
Sbjct: 522 VWTWGKGKEGQLGHGDVLP-RLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ GQLG + +P +KV SG+++ A G+ + T + G SGR
Sbjct: 581 TFGQLG-HSEFPTTVPRLSKVSSESGVWSVAAGHGYSLFLVDT---EDFQPGLYYSGRQD 636
Query: 211 HGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYI 261
+ ++ T+ TP L+ + G ++ A + A +D+N YI
Sbjct: 637 RAEGDTLPENPSGTT--TPVLLSCSKLGYISRVTAGKDSYLALVDKNIMGYI 686
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 50/162 (30%), Positives = 69/162 (42%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E++ WGK GQLG G ++ P+ K CL G G S+A+T +V SWG
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVK--CLDGKEVIHLEAGGSHSLALTAKSQVYSWG 578
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI----DENGR 258
+ G+LGH + + + PRL K V AAG +S + D
Sbjct: 579 SNTFGQLGHSEFPTTV----------PRLSKVSSESGVWSVAAGHGYSLFLVDTEDFQPG 628
Query: 259 VYIFG--DRAVDKMLFQEGNHARRPSLIS--KLPYSEEVVCG 296
+Y G DRA L + + P L+S KL Y V G
Sbjct: 629 LYYSGRQDRAEGDTLPENPSGTTTPVLLSCSKLGYISRVTAG 670
Score = 126 (49.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 56/217 (25%), Positives = 88/217 (40%)
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN 152
A G + G + + + +SL P R+ G K V+Q + G H +T DGE+Y S
Sbjct: 11 AEGSKERGLVHVWQAGSFSLTPERLPGWGGKTVLQAALGVKHGVLLTEDGEVY-----SF 65
Query: 153 GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G L +AA++ P +E L G A G S AVT G V WG +G+
Sbjct: 66 GTLPWKSEAAEICPSSPLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAV 125
Query: 212 GQESSILG---FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ + S SE +P L V++ A G H+ + + ++ +G
Sbjct: 126 ANQQYVSEPSPVSISDSETSPLL-----AVRILQLACGEEHTLALSISREIWAWGT-GCQ 179
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
L +P + L +V CG +H+ L
Sbjct: 180 LGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 123 (48.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 47/166 (28%), Positives = 73/166 (43%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++ G QAALG + V +T G+V S+G L E++ +
Sbjct: 32 PERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSFGT-----LPWKSEAAEI------CPS 80
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+P L L G V A G HS + E+G VY++G+ A + + PS +S +
Sbjct: 81 SPLLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVS-I 139
Query: 288 PYSE----------EVVCGGYHTCVLTSGGELYTWGSNENGC-LGI 322
SE ++ CG HT L+ E++ WG+ GC LG+
Sbjct: 140 SDSETSPLLAVRILQLACGEEHTLALSISREIWAWGT---GCQLGL 182
Score = 83 (34.3 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 37/126 (29%), Positives = 56/126 (44%)
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-----NGR 258
GGS RL S+ G L S+ +PRL+++ VK + +S D
Sbjct: 471 GGSRRL------SLPGLL---SQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTE 521
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
V+ +G + + L R L K +EV+ GG H+ LT+ ++Y+WGSN
Sbjct: 522 VWTWG-KGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 316 ENGCLG 321
G LG
Sbjct: 581 TFGQLG 586
Score = 47 (21.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 308 ELYTWGSNENGCLGIG 323
E++TWG + G LG G
Sbjct: 521 EVWTWGKGKEGQLGHG 536
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 146 (56.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
LTE G V + G N FGQLG+ + P I K++VV I+ G H+ A T G ++
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVF 61
Query: 146 MWGKNSNGQLGLGKKAA--KVIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
WG G G++ + +P+ P++V L G + S ++T G+
Sbjct: 62 QWG---TGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 198 VLSWGAGGSGRLGH 211
V WG+ G+L +
Sbjct: 119 VYVWGSNKHGQLAN 132
Score = 136 (52.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 40/121 (33%), Positives = 65/121 (53%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVY--ATGLND 99
G+ +G+LG+ R VV A E H K +A G H + T +G V+ TGL
Sbjct: 12 GSNSFGQLGVP--HGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLAS 69
Query: 100 FGQL---GISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+ G + + ++ EP R++GL+ + + + G HS+++T GE+Y+WG N +GQ
Sbjct: 70 CGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQ 129
Query: 155 L 155
L
Sbjct: 130 L 130
Score = 120 (47.3 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 44/140 (31%), Positives = 66/140 (47%)
Query: 192 VTGGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+T G+VLS G+ G+LG HG ++ P+ I EL KV AAG H
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVV----------PQAI-ELHKEKVVCIAAGLRH 50
Query: 250 SACIDENGRVYIFGD--RAVDKMLFQEGN-----HARRPSLISKLPYSEE--VVCGGYHT 300
+ +G V+ +G + + L A+ PS ++ L S+ V+ G H+
Sbjct: 51 AVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHS 110
Query: 301 CVLTSGGELYTWGSNENGCL 320
LT GE+Y WGSN++G L
Sbjct: 111 ASLTDAGEVYVWGSNKHGQL 130
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 110 (43.8 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
+G+LG GSLES +P + A ++A+A GG H+ +++ G +Y G N+ GQLG+
Sbjct: 10 HGQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGL 67
Score = 105 (42.0 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
HGQ LG SE PRL++ L GV ++ AAG HSAC+ + G +Y++G
Sbjct: 10 HGQ----LGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWG 58
Score = 91 (37.1 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 22/46 (47%), Positives = 25/46 (54%)
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+L+ LP V CG HT LT GGEL TWG + G LG G
Sbjct: 107 PALLD-LPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHG 151
Score = 91 (37.1 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIF 178
L+ V +S G H++A+T GEL WG GQLG G +A+ P +VE L G+
Sbjct: 114 LEPAVAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRAS--CDHPRRVEQLWAEGLR 171
Query: 179 TKQAALG 185
++ G
Sbjct: 172 AQEVVCG 178
Score = 91 (37.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P + L ++ ++ G HS+ ++ G+LY+WG N +GQLGL
Sbjct: 11 GQLGHG-SLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGLPS 69
Query: 160 KA 161
+A
Sbjct: 70 RA 71
Score = 84 (34.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+GQLG G ++ P VE L G+ + A G S V+ GG + WG SG+LG
Sbjct: 10 HGQLGHGSLESE--QQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 80 (33.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKI 242
G + A+T GG++ +WG G G+LGHG R++ ++ PR +++L EG++ +
Sbjct: 124 GSRHTAALTRGGELNTWGWGKYGQLGHGD--------RASCDH-PRRVEQLWAEGLRAQE 174
Query: 243 AAAGFLHS-ACIDENG 257
G ++ C+ + G
Sbjct: 175 VVCGPWNTYVCVLQQG 190
Score = 55 (24.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 30/111 (27%), Positives = 48/111 (43%)
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
GAG L G+ F+ S + L LE V + G H+A + G +
Sbjct: 83 GAGPEDPLLPGEPPGA-AFI-SIQAFPALLDLPLEPA-VAAVSCGSRHTAALTRGGELNT 139
Query: 262 FGDRAVDKMLFQEG---NHARR-PSLISKLPYSEEVVCGGYHT--CVLTSG 306
+G ++ + +H RR L ++ ++EVVCG ++T CVL G
Sbjct: 140 WGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVVCGPWNTYVCVLQQG 190
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 147 (56.8 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 57/191 (29%), Positives = 88/191 (46%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQI 128
K L+A A G H + LTE G VY+ G + + +E S P+ + L + VV +
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPW-RSEPAELCPSS--PILENALVGQYVVTV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-----LSGIFTKQAA 183
+TG HS A+T G +YMWG+NS GQ + + P P + L + Q A
Sbjct: 97 ATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLA 156
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKI 242
G E ++A++ ++ +WG G LG + +T T P+ ++ L G V
Sbjct: 157 CGEEHTLALSISREIWAWGTGCQ-----------LGLITTTFPVTKPQKVEHLAGRVVLQ 205
Query: 243 AAAGFLHSACI 253
A G HS +
Sbjct: 206 VACGAFHSLAL 216
Score = 132 (51.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 44/139 (31%), Positives = 68/139 (48%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP--LRIS 119
P++ +A + +A G H+ +TE+G VY G N GQ ++ N Y EP + IS
Sbjct: 82 PILENALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVA-NQQYVPEPNPVSIS 140
Query: 120 G------LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
L ++Q++ G H+ A+++ E++ WG QLGL V P KVE
Sbjct: 141 DSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG H+L LT VY+ G N FGQ
Sbjct: 525 WGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ 584
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG S+ + R++ + E V ++ G +S + VD E + G +G+
Sbjct: 585 LGHSD---FPTTVPRLAKMNSENGVWSVAAGQDYSLFL-VDTEDFQPGLYYSGR 634
Score = 92 (37.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 35/120 (29%), Positives = 53/120 (44%)
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-----NGRVYIFGD 264
G + S+ G L S+ +PRL++ VK + +S D V+ +G
Sbjct: 471 GGTRRLSLPGLL---SQVSPRLLRRAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWG- 526
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ D L R L K +EV+ GGYH+ LT+ ++Y+WGSN G LG
Sbjct: 527 KGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQLG 586
Score = 48 (22.0 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 308 ELYTWGSNENGCLGIG 323
E++TWG ++G LG G
Sbjct: 521 EVWTWGKGKDGQLGHG 536
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 152 (58.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 58/191 (30%), Positives = 87/191 (45%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQI 128
K L+A A G H + LTE G VY+ G + S I S PL S L V+ +
Sbjct: 41 KTVLQA-ALGVRHGVLLTEDGEVYSFGTLPWKSE--SAEICPS-SPLLESALVGHHVITV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV---ECLSGIFTK--QAA 183
+TG HS A+T G +YMWG+N+ GQ + + P P + E + + Q A
Sbjct: 97 ATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLA 156
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKI 242
G E ++A++ ++ +WG G LG + +T T P+ ++ L G V
Sbjct: 157 CGEEHTLALSLSREIWAWGTGCQ-----------LGLITTTFPVTKPQKVEHLAGRVVLQ 205
Query: 243 AAAGFLHSACI 253
A G HS +
Sbjct: 206 VACGAFHSLAL 216
Score = 140 (54.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 45/139 (32%), Positives = 68/139 (48%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-- 119
P++ SA H + +A G H+ +TE+G VY G N GQ ++ N Y EP +S
Sbjct: 82 PLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVA-NQQYVPEPSPVSIS 140
Query: 120 ------GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
L ++Q++ G H+ A+++ E++ WG QLGL V P KVE
Sbjct: 141 DSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 131 (51.2 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 38/114 (33%), Positives = 57/114 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG+H+L LT VY+ G N FGQ
Sbjct: 525 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSNTFGQ 584
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG SE + R+S + E V ++ G +S + VD E + G +G+
Sbjct: 585 LGHSE---FPTTVPRLSKVSSENGVWSVAAGQDYSLFL-VDTEDFQPGLYYSGR 634
Score = 129 (50.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 50/162 (30%), Positives = 70/162 (43%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E++ WGK GQLG G ++ P+ K CL G G S+A+T +V SWG
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVK--CLDGKEVIHLEAGGSHSLALTAKSQVYSWG 578
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI----DENGR 258
+ G+LGH + + + PRL K V AAG +S + D
Sbjct: 579 SNTFGQLGHSEFPTTV----------PRLSKVSSENGVWSVAAGQDYSLFLVDTEDFQPG 628
Query: 259 VYIFG--DRAVDKMLFQEGNHARRPSLIS--KLPYSEEVVCG 296
+Y G DRA L + + + P L+S KL Y V G
Sbjct: 629 LYYSGRQDRAEGDTLPENPSGTKTPVLLSCSKLGYISRVTAG 670
Score = 124 (48.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 55/217 (25%), Positives = 88/217 (40%)
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN 152
A G + G + + + +SL P R+ G K V+Q + G H +T DGE+Y S
Sbjct: 11 AEGSKERGLVHVWQAGSFSLTPERLPGWGGKTVLQAALGVRHGVLLTEDGEVY-----SF 65
Query: 153 GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G L ++A++ P +E L G A G S AVT G V WG +G+
Sbjct: 66 GTLPWKSESAEICPSSPLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAV 125
Query: 212 GQESSI---LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ + S SE +P L V++ A G H+ + + ++ +G
Sbjct: 126 ANQQYVPEPSPVSISDSETSPSL-----AVRILQLACGEEHTLALSLSREIWAWGT-GCQ 179
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
L +P + L +V CG +H+ L
Sbjct: 180 LGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLAL 216
Score = 123 (48.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 48/166 (28%), Positives = 72/166 (43%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++ G QAALG V +T G+V S+G L ES+ +
Sbjct: 32 PERLPGWGGKTVLQAALGVRHGVLLTEDGEVYSFGT-----LPWKSESAEI------CPS 80
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+P L L G V A G HS + E+G VY++G+ A + + PS +S +
Sbjct: 81 SPLLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVS-I 139
Query: 288 PYSE----------EVVCGGYHTCVLTSGGELYTWGSNENGC-LGI 322
SE ++ CG HT L+ E++ WG+ GC LG+
Sbjct: 140 SDSETSPSLAVRILQLACGEEHTLALSLSREIWAWGT---GCQLGL 182
Score = 83 (34.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 37/126 (29%), Positives = 56/126 (44%)
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-----NGR 258
GGS RL S+ G L S+ +PRL+++ VK + +S D
Sbjct: 471 GGSRRL------SLPGLL---SQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTE 521
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
V+ +G + + L R L K +EV+ GG H+ LT+ ++Y+WGSN
Sbjct: 522 VWTWG-KGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 316 ENGCLG 321
G LG
Sbjct: 581 TFGQLG 586
Score = 47 (21.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 308 ELYTWGSNENGCLGIG 323
E++TWG + G LG G
Sbjct: 521 EVWTWGKGKEGQLGHG 536
Score = 37 (18.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTE 88
++ +L R A WG G +LGL + +P + +ACG H+L L +
Sbjct: 163 LALSLSREIWA-WGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 146 (56.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 58/191 (30%), Positives = 88/191 (46%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQI 128
K L+A A G H + LTE G VY+ G + + G E S P+ + L + VV +
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPW-RSGPVEICPSS--PILENALVGQYVVTV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV---EC--LSGIFTKQAA 183
+TG HS A+T +G YMWG+NS GQ + + P P + E L + Q A
Sbjct: 97 ATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLA 156
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKI 242
G E ++A++ ++ +WG G LG + + T P+ ++ L G V
Sbjct: 157 CGEEHTLALSISREIWAWGTGCQ-----------LGLITTAFPVTKPQKVEHLAGRVVLQ 205
Query: 243 AAAGFLHSACI 253
A G HS +
Sbjct: 206 VACGAFHSLAL 216
Score = 128 (50.1 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 42/139 (30%), Positives = 66/139 (47%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P++ +A + +A G H+ +T+ G Y G N GQ ++ N Y EP +S
Sbjct: 82 PILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVA-NQQYVPEPNPVSIA 140
Query: 122 KKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
E ++Q++ G H+ A+++ E++ WG QLGL A V P KVE
Sbjct: 141 DSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG H+L LT VY+ G N FGQ
Sbjct: 531 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ 590
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG S+ + R++ + E V ++ G +S + VD E + G +G+
Sbjct: 591 LGHSD---FPTTVPRLAKISSENGVWSVAAGRDYSLFL-VDTEDFQPGLYYSGR 640
Score = 92 (37.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-----NGR 258
GGS RL S+ G L S+ +PRL+++ VK + +S D
Sbjct: 477 GGSRRL------SLPGLL---SQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTE 527
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
V+ +G + + L R L K +EV+ GGYH+ LT+ ++Y+WGSN
Sbjct: 528 VWTWG-KGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 316 ENGCLG 321
G LG
Sbjct: 587 TFGQLG 592
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 308 ELYTWGSNENGCLGIG 323
E++TWG + G LG G
Sbjct: 527 EVWTWGKGKEGQLGHG 542
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 145 (56.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 57/191 (29%), Positives = 88/191 (46%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQI 128
K L+A A G H + LTE G VY+ G + + G E S P+ + L + V+ +
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPW-RSGPVEICPSS--PILENALVGQYVITV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV---EC--LSGIFTKQAA 183
+TG HS A+T +G YMWG+NS GQ + + P P + E L + Q A
Sbjct: 97 ATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVRILQLA 156
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKI 242
G E ++A++ ++ +WG G LG + + T P+ ++ L G V
Sbjct: 157 CGEEHTLALSISREIWAWGTGCQ-----------LGLITTAFPVTKPQKVEHLAGRVVLQ 205
Query: 243 AAAGFLHSACI 253
A G HS +
Sbjct: 206 VACGAFHSLAL 216
Score = 127 (49.8 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 42/139 (30%), Positives = 66/139 (47%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P++ +A + +A G H+ +T+ G Y G N GQ ++ N Y EP +S
Sbjct: 82 PILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVA-NQQYVPEPNPVSIA 140
Query: 122 KKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
E ++Q++ G H+ A+++ E++ WG QLGL A V P KVE
Sbjct: 141 DSEASPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTAFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 37/114 (32%), Positives = 56/114 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + R +P+ + + L GG H+L LT VY+ G N FGQ
Sbjct: 531 WGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSNTFGQ 590
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LG S+ + R++ + E V I+ G +S + VD E + G +G+
Sbjct: 591 LGHSD---FPTTVPRLAKISSENGVWSIAAGRDYSLFL-VDTEDFQPGLYYSGR 640
Score = 92 (37.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-----NGR 258
GGS RL S+ G L S+ +PRL+++ VK + +S D
Sbjct: 477 GGSRRL------SLPGLL---SQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTE 527
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
V+ +G + + L R L K +EV+ GGYH+ LT+ ++Y+WGSN
Sbjct: 528 VWTWG-KGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 316 ENGCLG 321
G LG
Sbjct: 587 TFGQLG 592
Score = 47 (21.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 308 ELYTWGSNENGCLGIG 323
E++TWG + G LG G
Sbjct: 527 EVWTWGKGKEGQLGHG 542
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 141 (54.7 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 54/190 (28%), Positives = 84/190 (44%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
K L+A A G H + LTE G VY+ G + I S L + + + VV ++
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPWRSE--PAEICPSCPILENALIGQFVVTVA 97
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-----CLSGIFTKQAAL 184
+G H+ A+T G YMWG+NS GQ + + P P + L + Q A
Sbjct: 98 SGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLAC 157
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKIA 243
G E ++A++ ++ +WG G LG + +T T P+ ++ L G V
Sbjct: 158 GEEHTLALSISREIWAWGTGCQ-----------LGLITTTFPVTKPQKVEHLAGRVVLQV 206
Query: 244 AAGFLHSACI 253
A G HS +
Sbjct: 207 ACGAFHSLAL 216
Score = 126 (49.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 43/139 (30%), Positives = 66/139 (47%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP--LRIS 119
P++ +A + +A G H +TE+G Y G N GQ ++ N Y EP + IS
Sbjct: 82 PILENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVA-NQQYVPEPNPVSIS 140
Query: 120 G------LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
L ++Q++ G H+ A+++ E++ WG QLGL V P KVE
Sbjct: 141 DSETSSLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTK-PQKVEH 197
Query: 174 LSGIFTKQAALGFEQSVAV 192
L+G Q A G S+A+
Sbjct: 198 LAGRVVLQVACGAFHSLAL 216
Score = 92 (37.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 38/126 (30%), Positives = 57/126 (45%)
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-----NGR 258
GGS RL S+ G L S+ +PRL+++ VK + +S D
Sbjct: 476 GGSRRL------SLPGLL---SQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTE 526
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
V+ +G + + L R L K +EV+ GGYH+ LT+ ++Y+WGSN
Sbjct: 527 VWTWG-KGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSN 585
Query: 316 ENGCLG 321
G LG
Sbjct: 586 TFGQLG 591
Score = 47 (21.6 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 308 ELYTWGSNENGCLGIG 323
E++TWG + G LG G
Sbjct: 526 EVWTWGKGKEGQLGHG 541
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 159 (61.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 56/184 (30%), Positives = 82/184 (44%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y WG N+N LG G + +K P + S ++ KQ L SV ++ G+V + G
Sbjct: 143 EVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLCKFHSVFLSQQGQVYTCG 202
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G AA H+ + E+G VY F
Sbjct: 203 HGRGGRLGHGDEQTCL---------VPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTF 253
Query: 263 GDRAVDKM-LFQEGNHARRP-SLISKLPYSEEVVC--GGYHTCVLTSGGELYTWGSNENG 318
G ++ + + P L ++ VVC VL + + G N +G
Sbjct: 254 GLNTFHQLGIIPPPSSCNVPRQLTVRMKKGHTVVCRKAWRFWQVLWTSEDFLVLGLN-SG 312
Query: 319 CLGI 322
LGI
Sbjct: 313 HLGI 316
Score = 131 (51.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 39/119 (32%), Positives = 55/119 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + HS +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTEDGCVYTFGLNTFHQL 261
Query: 104 GISENIGYSLEPLRIS-GLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GI P +++ +KK V + + + + G NS G LG+ +K
Sbjct: 262 GIIPPPSSCNVPRQLTVRMKKGHTVVCRKAWRFWQVLWTSEDFLVLGLNS-GHLGILRK 319
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 137 (53.3 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 49/185 (26%), Positives = 84/185 (45%)
Query: 46 GDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ LG + +P FE+ LK L GG H+ LT G VY G+N+ G +
Sbjct: 158 GEGEALGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCGINEKGTV 217
Query: 104 ---GISENIGYSLEPLRIS---GLKKE--VVQISTGYHHSSAITVDGELYMWG--KNSNG 153
G+ E G + E ++ ++KE +V ++ G ++A+T G + WG +NSNG
Sbjct: 218 PAEGV-EKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNG 276
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ + K+ P + + + A G V + G +L++G G G+LG
Sbjct: 277 NVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSS 336
Query: 214 ESSIL 218
+ +
Sbjct: 337 RTKTI 341
Score = 84 (34.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK------VIPIPTKVEC 173
G ++ V I G H + DG+++ GKN++ LGLG K + ++E
Sbjct: 432 GAERTFVNIE-GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEF 490
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
S I A L S+A + G +WG +G+LG G
Sbjct: 491 DSKIVGVSAKLA--TSIAWSEDGTAYAWGFDTTGQLGLG 527
Score = 78 (32.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 30/109 (27%), Positives = 47/109 (43%)
Query: 5 SLTAMTKYYLKQDIKLGSKLGICKRWISST--LQRRFAAL-WGN--GDYGRLGLGSLESR 59
S K ++DI+ K+ + S T L + + + WGN G + + L +
Sbjct: 227 STDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNVDVHPLLHK 286
Query: 60 WR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS 106
+ PVV K + +A G H + L E GC+ G + GQLG S
Sbjct: 287 MQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRS 335
Score = 60 (26.2 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRA-----VDKM-LFQEG--NHARRPS 282
K + V + A+GF + E+G+ Y FG + A VD+ + Q+G N R
Sbjct: 365 KFFDVVAKNVFASGFW-TIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVF 423
Query: 283 LISKLPY--SEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L ++ P +E + G H +L S G+++ G N + LG+G
Sbjct: 424 LPAEAPAFGAERTFVNIEGVQHVVILGSDGKVFAMGKNTDNALGLG 469
Score = 49 (22.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 30/144 (20%), Positives = 53/144 (36%)
Query: 196 GKVLSWGAGGSGRLGHGQESSILGF----LRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
GK ++G +LG + + +G R + P + + G H
Sbjct: 388 GKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQHVV 447
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPS-------LISKLPYSEEVVCGGYHTCVLT 304
+ +G+V+ G + D L GN + I ++ + ++V G + T
Sbjct: 448 ILGSDGKVFAMG-KNTDNALGL-GNWTGKDDQQHWLYDTIQEIEFDSKIV--GVSAKLAT 503
Query: 305 S-----GGELYTWGSNENGCLGIG 323
S G Y WG + G LG+G
Sbjct: 504 SIAWSEDGTAYAWGFDTTGQLGLG 527
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 150 (57.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 67/262 (25%), Positives = 114/262 (43%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGYHH 134
+A GG HT+ + + G V++ G N+FGQ G+ G SL ++ G + + IS G+
Sbjct: 48 IAGGGNHTMVILDNGEVFSCGSNEFGQCGLPR--GESLGVFHKVPG--NDWLDISCGWEF 103
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S + GE+Y+ G+ G+LGLGK+ + I + + G K+ + ++ T
Sbjct: 104 SILVKRSGEVYVCGRGLKGELGLGKETPESELIYSTT--VDGF--KEIKSCMQHTIIQTT 159
Query: 195 GGKVLSWGAGGSGRLGHGQESSI-----LGFLRSTSEYTPRLIKELEGV-----KVKIAA 244
G V WG G+LG ++ + L F +++ L +E + +VKI
Sbjct: 160 NGLV-GWGNSRKGQLGETEDKIMWTPKTLRFGVVCKDFS--LGREFTAIQTDTNRVKIFG 216
Query: 245 AGFLHSACIDENGRVYIFGDR----AVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYH 299
+ + RV + +L GN++ + + EE G H
Sbjct: 217 KSSIKNIPESTVARVAAMWSSVHILSETNVLQSFGNNSHDQLFPNNSSVAVEEYAIGSEH 276
Query: 300 TCVLTSGGELYTWGSNENGCLG 321
V TS +Y WG +E+G G
Sbjct: 277 GLV-TSDNIVYAWGWSEHGNCG 297
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 150 (57.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 67/262 (25%), Positives = 114/262 (43%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGYHH 134
+A GG HT+ + + G V++ G N+FGQ G+ G SL ++ G + + IS G+
Sbjct: 48 IAGGGNHTMVILDNGEVFSCGSNEFGQCGLPR--GESLGVFHKVPG--NDWLDISCGWEF 103
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S + GE+Y+ G+ G+LGLGK+ + I + + G K+ + ++ T
Sbjct: 104 SILVKRSGEVYVCGRGLKGELGLGKETPESELIYSTT--VDGF--KEIKSCMQHTIIQTT 159
Query: 195 GGKVLSWGAGGSGRLGHGQESSI-----LGFLRSTSEYTPRLIKELEGV-----KVKIAA 244
G V WG G+LG ++ + L F +++ L +E + +VKI
Sbjct: 160 NGLV-GWGNSRKGQLGETEDKIMWTPKTLRFGVVCKDFS--LGREFTAIQTDTNRVKIFG 216
Query: 245 AGFLHSACIDENGRVYIFGDR----AVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYH 299
+ + RV + +L GN++ + + EE G H
Sbjct: 217 KSSIKNIPESTVARVAAMWSSVHILSETNVLQSFGNNSHDQLFPNNSSVAVEEYAIGSEH 276
Query: 300 TCVLTSGGELYTWGSNENGCLG 321
V TS +Y WG +E+G G
Sbjct: 277 GLV-TSDNIVYAWGWSEHGNCG 297
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 149 (57.5 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 63/228 (27%), Positives = 103/228 (45%)
Query: 96 GLNDFGQLGIS--ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G N QLG++ E++ YS P +I + + +IS G +H+ + D +L+ G N G
Sbjct: 6 GSNGNFQLGLNNDEDV-YS--P-QIVPFDRAIEKISCGGNHTLLLDEDSQLWACGDNRKG 61
Query: 154 QLGLGKKAAKVIPI-PTKVECLSGIFTKQ---AALGFEQSVAVTGGGK-VLSWGAGGSGR 208
Q G K P+ P + + + ++ G+E SV V + V S G G SG
Sbjct: 62 QCGYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCGWEFSVIVHADRRRVCSCGEGLSGE 121
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG G S+ G LR P L + E + + I+A G H C+ G +Y GD
Sbjct: 122 LGQGNRSNSQG-LREID--IPYL-DDKEFI-IDISA-GLRHWICVTNEGNLYGCGDGRKG 175
Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
++ + S + ++ +++ VVCG + VL G + G +
Sbjct: 176 QLGPVVMKTVNKVSFLGRIEHAQAVVCGVQFSAVLQETGHVIVLGGEK 223
Score = 136 (52.9 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 60/234 (25%), Positives = 110/234 (47%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+L NG++ +LGL + E + P + F++ +++ ++CGG HTL L E ++A G N
Sbjct: 4 SLGSNGNF-QLGLNNDEDVYSPQIVP-FDR-AIEKISCGGNHTLLLDEDSQLWACGDNRK 60
Query: 101 GQLG--ISENIGYSLEP--LRI-SGLKKEV-VQISTGYHHSSAITVDGE-LYMWGKNSNG 153
GQ G + E + L P LRI + + E V ++ G+ S + D + G+ +G
Sbjct: 61 GQCGYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCGWEFSVIVHADRRRVCSCGEGLSG 120
Query: 154 QLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+LG G ++ + I IP + F + G + VT G + G G G+L
Sbjct: 121 ELGQGNRSNSQGLREIDIPYLDD---KEFIIDISAGLRHWICVTNEGNLYGCGDGRKGQL 177
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G ++ +++ ++ + + +E + + F SA + E G V + G
Sbjct: 178 G-----PVV--MKTVNKVS--FLGRIEHAQAVVCGVQF--SAVLQETGHVIVLG 220
Score = 43 (20.2 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENG 318
++ G H + T G + +G NE+G
Sbjct: 284 QIASGTEHNILRTKKGSVLIYGWNEHG 310
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 157 (60.3 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 67/259 (25%), Positives = 112/259 (43%)
Query: 73 LKALACGGAHTLFLTET--GCVYATGLNDFGQLGIS-ENIGYSLEPLRISGL-KKEVVQI 128
++ LA HT LT+ ++ G G+LG E+ +S + GL K+V +
Sbjct: 425 IQTLAMSKLHTAILTDDPESNLFICGFGPGGRLGTGDESTRFSFVCIEGGGLANKKVASV 484
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV---IPIPTKVECLSGIFTKQAALG 185
+ G H+ AIT G+++ WG N GQLG G A +P+ + F K+ LG
Sbjct: 485 ALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDDVPVQLSPRQIFNPFKKEVILG 544
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-----EYTPRLI-KELEGVK 239
S V S SG G+ LG + S + + TPR + L
Sbjct: 545 AAASA-------VHSVVYSTSGLYTFGKNEGQLGLVDSDARSLEVQTTPRRVGASLFSTP 597
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--RPSLIS-KLPYS-EEVV- 294
++ +A +A + +N V++F ++ F ++R R S ++ + S +V
Sbjct: 598 IQSVSATDQATAILLQNHEVWVFAHYGYSRLSFPLEINSRFIRDSFMATRYDTSINRIVK 657
Query: 295 --CGGYHTCVLTSGGELYT 311
GG C L+S G+++T
Sbjct: 658 IRSGGNTICALSSSGDVFT 676
Score = 150 (57.9 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 67/234 (28%), Positives = 109/234 (46%)
Query: 44 GNGDYGRLGLGSLESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
G G GRLG G +R+ VC + ++A G HTL +TE G +++ G N F
Sbjct: 450 GFGPGGRLGTGDESTRFS-FVCIEGGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKF 508
Query: 101 GQLGIS-------ENIGYSLEPLRI-SGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNS 151
GQLG +++ L P +I + KKEV+ + HS + G LY +GKN
Sbjct: 509 GQLGYGLPRANNKDDVPVQLSPRQIFNPFKKEVILGAAASAVHSVVYSTSG-LYTFGKNE 567
Query: 152 NGQLGLGKKAAKVIPIPTKVECL-SGIFTK--QAALGFEQSVAVT-GGGKVLSWGAGGSG 207
GQLGL A+ + + T + + +F+ Q+ +Q+ A+ +V + G
Sbjct: 568 -GQLGLVDSDARSLEVQTTPRRVGASLFSTPIQSVSATDQATAILLQNHEVWVFAHYGYS 626
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC-IDENGRVY 260
RL E + F+R + T R + + VKI + G ++ C + +G V+
Sbjct: 627 RLSFPLEINSR-FIRDSFMAT-RYDTSINRI-VKIRSGG--NTICALSSSGDVF 675
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 37/142 (26%), Positives = 61/142 (42%)
Query: 68 FEKHSLKALACGGAHTLFLTETGC-VYATGLNDFGQLGIS--ENIGYSLEPLRISGLKKE 124
FE + + + CGG +T E VY G N +G G+S +NI E ++ KK
Sbjct: 260 FE-NKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQELSQKK- 317
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ Q+ G + + + +LY+WG LG+ P+ + K
Sbjct: 318 INQLCGGQSFTVCLLNNNDLYIWGNREI--LGMEYDDDAYSPLELDFFKKNNYTVKNITC 375
Query: 185 GFEQSVAVTGGGKVLSWGAGGS 206
G + + +T GK+ WG GG+
Sbjct: 376 GTDHCLVLTDNGKLFGWGTGGN 397
Score = 106 (42.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-SLISKLPYS 290
I+EL K+ G + C+ N +YI+G+R + M + + ++ K Y+
Sbjct: 310 IQELSQKKINQLCGGQSFTVCLLNNNDLYIWGNREILGMEYDDDAYSPLELDFFKKNNYT 369
Query: 291 -EEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ + CG H VLT G+L+ WG+ N
Sbjct: 370 VKNITCGTDHCLVLTDNGKLFGWGTGGN 397
Score = 88 (36.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLE--PLRIS-GLKKE 124
+ + + CG HT+ T +Y+ G ND G LG S I LE P I+ +
Sbjct: 39 NDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIK-DLEHSPTLINFTFPSK 97
Query: 125 VVQISTGYHHSSAITVDGELYMWG--KNSNGQLGL 157
+ +I+ G +H++ + +G++Y+ G ++ G LGL
Sbjct: 98 IKKITCGDNHTAILLENGKVYITGGFRDYCGVLGL 132
Score = 73 (30.8 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 35/147 (23%), Positives = 57/147 (38%)
Query: 101 GQLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQL Y + P I L ++ ++ G H+ T D +LY +G N G LG
Sbjct: 16 GQLPPEYCTDYVQVNPTAIPNLPNDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKT 75
Query: 160 KAAKVIPI---PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ + + PT + K+ G + + GKV G G
Sbjct: 76 YSSGIKDLEHSPTLINFTFPSKIKKITCGDNHTAILLENGKVYITG-------GFRDYCG 128
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIA 243
+LG L S E L K E ++++ +
Sbjct: 129 VLG-LPSFGEKNELLTKSFEFIEIQFS 154
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 37/142 (26%), Positives = 61/142 (42%)
Query: 68 FEKHSLKALACGGAHTLFLTETGC-VYATGLNDFGQLGIS--ENIGYSLEPLRISGLKKE 124
FE + + + CGG +T E VY G N +G G+S +NI E ++ KK
Sbjct: 260 FE-NKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQELSQKK- 317
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ Q+ G + + + +LY+WG LG+ P+ + K
Sbjct: 318 INQLCGGQSFTVCLLNNNDLYIWGNREI--LGMEYDDDAYSPLELDFFKKNNYTVKNITC 375
Query: 185 GFEQSVAVTGGGKVLSWGAGGS 206
G + + +T GK+ WG GG+
Sbjct: 376 GTDHCLVLTDNGKLFGWGTGGN 397
Score = 106 (42.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-SLISKLPYS 290
I+EL K+ G + C+ N +YI+G+R + M + + ++ K Y+
Sbjct: 310 IQELSQKKINQLCGGQSFTVCLLNNNDLYIWGNREILGMEYDDDAYSPLELDFFKKNNYT 369
Query: 291 -EEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ + CG H VLT G+L+ WG+ N
Sbjct: 370 VKNITCGTDHCLVLTDNGKLFGWGTGGN 397
Score = 88 (36.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLE--PLRIS-GLKKE 124
+ + + CG HT+ T +Y+ G ND G LG S I LE P I+ +
Sbjct: 39 NDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIK-DLEHSPTLINFTFPSK 97
Query: 125 VVQISTGYHHSSAITVDGELYMWG--KNSNGQLGL 157
+ +I+ G +H++ + +G++Y+ G ++ G LGL
Sbjct: 98 IKKITCGDNHTAILLENGKVYITGGFRDYCGVLGL 132
Score = 73 (30.8 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 35/147 (23%), Positives = 57/147 (38%)
Query: 101 GQLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQL Y + P I L ++ ++ G H+ T D +LY +G N G LG
Sbjct: 16 GQLPPEYCTDYVQVNPTAIPNLPNDIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKT 75
Query: 160 KAAKVIPI---PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ + + PT + K+ G + + GKV G G
Sbjct: 76 YSSGIKDLEHSPTLINFTFPSKIKKITCGDNHTAILLENGKVYITG-------GFRDYCG 128
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIA 243
+LG L S E L K E ++++ +
Sbjct: 129 VLG-LPSFGEKNELLTKSFEFIEIQFS 154
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 155 (59.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 72/261 (27%), Positives = 113/261 (43%)
Query: 50 RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI 109
R G S+ P +C K L+A A G H L LTE G VY+ G + + G E
Sbjct: 24 RAGSCSVTPERLPGLCG---KTVLQA-ALGTNHGLLLTEGGEVYSFGKLPW-RSGPEEFC 78
Query: 110 GYSLEP-LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
S P L + L + V+ ++ G H+ A+T G +YMWG NS+GQ + + P P
Sbjct: 79 ANS--PILENTLLGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQP 136
Query: 169 TKVEC-----LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+ L + Q A G E ++A++ ++ +WG+G LG + +
Sbjct: 137 ISISDSETSPLLSVRVLQLACGEEHTLALSLSREIWAWGSGCQ-----------LGLITT 185
Query: 224 TSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T T P+ ++ L G V A G HS + V + + K + + NH +
Sbjct: 186 TFPVTKPQKVEHLAGRVVLQIACGAYHSLAL-----VQCLPVQEM-KPIPERCNHCSQ-L 238
Query: 283 LISKLPYSEEVVCGGYHTCVL 303
LI+ + V+ H C L
Sbjct: 239 LITMTDKEDHVIISDSHCCPL 259
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 47/152 (30%), Positives = 72/152 (47%)
Query: 46 GDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC-----GGAHTLFLTETGCVYATGLNDF 100
G RL L L S+ P + + ++ +A G A L + V++ G
Sbjct: 472 GGSRRLSLPGLLSQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKD 531
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + + L+PL + L KEV+Q+S G HHS A+T ++Y WG N GQLG
Sbjct: 532 GQLGHGDVLP-RLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSNIFGQLG-HT 589
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ +P KV C G+++ A + +A
Sbjct: 590 NSPTTVPRLAKV-CGDGVWSTAAGSDYSLFLA 620
Score = 142 (55.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 53/169 (31%), Positives = 78/169 (46%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E++ WG+ +GQLG G ++ P+ K L G Q + G S+A+T +V SWG
Sbjct: 522 EVWSWGRGKDGQLGHGDVLPRLQPLCVK--SLDGKEVIQLSAGGHHSLALTAKSQVYSWG 579
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI-DEN----G 257
+ G+LGH + + PRL K G V AAG +S + DE G
Sbjct: 580 SNIFGQLGHTNSPTTV----------PRLAKVC-GDGVWSTAAGSDYSLFLADEEDFQPG 628
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLI---SKLPYSEEVVCGGYHTCVL 303
Y + A D + E N ++ P L+ SK+ Y V+ GG + VL
Sbjct: 629 LYYCGQETATDNL--SENNCSKNPVLLLSCSKIGYISNVIAGGDNCLVL 675
Score = 43 (20.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 308 ELYTWGSNENGCLGIG 323
E+++WG ++G LG G
Sbjct: 522 EVWSWGRGKDGQLGHG 537
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 148 (57.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 69/249 (27%), Positives = 104/249 (41%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSA 137
G H+L LTETG +Y G N QL ++ I +P++I + + V+ IS G + S+A
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA--VTGG 195
I +G LY+WG G K PTKV+ L G+ + VA T
Sbjct: 102 IMENGLLYVWGTLIEG--------GKCTESPTKVDLLKGVTCVSIGINHCAVVADSPTTP 153
Query: 196 GK--VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
K V +WG G+LG ++G + PR + G K G +A I
Sbjct: 154 EKRSVYTWGTNRKGQLG------VVG---DSITNAPRRVTL--GSKAISVCCGEEFTAAI 202
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
E V+++G ++ N S+ K ++V C + + G +
Sbjct: 203 VEGNEVFVWGYNKSRQIC--SNNSDEIISIPVKPFLGRDIVELSCTKNYIAARSGVGNVC 260
Query: 311 TWGSNENGC 319
WGSNE C
Sbjct: 261 VWGSNEQVC 269
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 56/194 (28%), Positives = 81/194 (41%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+ GY+HS A+T GELY WG N + QL KA I P K++ + K + G
Sbjct: 39 MDNGYNHSLALTETGELYGWGDNRHHQLS-SNKAITSIDKPIKIQVIPNQRVKSISCGGN 97
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAG 246
S A+ G + WG G G ES L+K + V + I A
Sbjct: 98 FSAAIMENGLLYVWGTLIEG--GKCTESPT----------KVDLLKGVTCVSIGINHCAV 145
Query: 247 FLHSACIDENGRVYIFGDRAVDKM-LFQEG--NHARRPSLISKLPYSEEVVCGGYHTCVL 303
S E VY +G ++ + + N RR +L SK + V CG T +
Sbjct: 146 VADSPTTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRVTLGSK---AISVCCGEEFTAAI 202
Query: 304 TSGGELYTWGSNEN 317
G E++ WG N++
Sbjct: 203 VEGNEVFVWGYNKS 216
Score = 141 (54.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 58/232 (25%), Positives = 97/232 (41%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG-LNDF 100
WG+ + +L ++ S +P+ +K+++CGG + + E G +Y G L +
Sbjct: 58 WGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENGLLYVWGTLIEG 117
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-------ELYMWGKNSNG 153
G+ +E+ P ++ L K V +S G +H A+ D +Y WG N G
Sbjct: 118 GKC--TES------PTKVD-LLKGVTCVSIGINHC-AVVADSPTTPEKRSVYTWGTNRKG 167
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG+ + P +V S + G E + A+ G +V WG S ++
Sbjct: 168 QLGV--VGDSITNAPRRVTLGSKAIS--VCCGEEFTAAIVEGNEVFVWGYNKSRQICSNN 223
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI-DENGRVYIFGD 264
I+ + R I EL K IAA + + C+ N +V GD
Sbjct: 224 SDEIISI--PVKPFLGRDIVELSCTKNYIAARSGVGNVCVWGSNEQVCRIGD 273
>UNIPROTKB|H0YD20 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 PANTHER:PTHR22870:SF7
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
Ensembl:ENST00000532546 Bgee:H0YD20 Uniprot:H0YD20
Length = 126
Score = 118 (46.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 114 EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
EP R++GL+ + + + G HS+++T GE+Y+WG N +GQL +AA +P+P K+E
Sbjct: 18 EPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLA--NEAA-FLPVPQKIE 74
>UNIPROTKB|H0YE53 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 Ensembl:ENST00000533241 Uniprot:H0YE53
Length = 144
Score = 118 (46.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
GE+Y+WG N +GQL +AA +P+P K+E K A+ G+ VA T GK+
Sbjct: 4 GEVYVWGSNKHGQLA--NEAA-FLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMF 60
Query: 200 SWGAGGSGRLGHGQES 215
+WG G+LG E+
Sbjct: 61 TWGRADYGQLGRKLET 76
>UNIPROTKB|J3KQ33 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AC007242
EMBL:AC007279 HGNC:HGNC:443 ChiTaRS:ALS2 PROSITE:PS50012
ProteinModelPortal:J3KQ33 Ensembl:ENST00000409632 Uniprot:J3KQ33
Length = 139
Score = 118 (46.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQI 128
K L+A A G H + LTE G VY+ G + + G E S P+ + L + V+ +
Sbjct: 41 KTVLQA-ALGVKHGVLLTEDGEVYSFGTLPW-RSGPVEICPSS--PILENALVGQYVITV 96
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+TG HS A+T +G YMWG+NS GQ + + + +P P V
Sbjct: 97 ATGSFHSGAVTDNGVAYMWGENSAGQCAVANQ--QYVPEPNPV 137
>ASPGD|ASPL0000040680 [details] [associations]
symbol:AN2874 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:BN001306 EMBL:AACD01000051
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_660478.1 ProteinModelPortal:Q5B9A6
EnsemblFungi:CADANIAT00010215 GeneID:2873908 KEGG:ani:AN2874.2
Uniprot:Q5B9A6
Length = 1365
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 70/243 (28%), Positives = 107/243 (44%)
Query: 92 VYATGLNDFGQLGISEN--IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
VY G N GQLG+ + Y +P + + L +VVQ++ G H A+T D ++Y WG
Sbjct: 906 VYVLGENGNGQLGMGNGTPVQYK-QPTKNTQLP-DVVQVAAGGEHCIALTHDNKIYTWGD 963
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-------VTGGGKVLSWG 202
NS+GQLG + +P +V+ S + + F Q VA +T G V WG
Sbjct: 964 NSHGQLGRLTNSMTA-QMPGEVD-FSEVNLPDYTI-FAQVVATRSACFVLTMFGDVYGWG 1020
Query: 203 AGGS-GRLGHG-QESSILGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+G Q LGF + TP I+EL+ VK ++AA A I +
Sbjct: 1021 TFSEIYEDENGEQHCEPLGFRHQCKCQRTPLHIQELQNVK-RLAAGSDHVLAQIS----I 1075
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY-TWGSNENG 318
I G+RA +G+ R+ + + G T T ++ +WG+ + G
Sbjct: 1076 LIGGNRASSSASKMKGSRVRKRK--------DTIAAEGSSTGSATKVRDVVRSWGAYKRG 1127
Query: 319 CLG 321
LG
Sbjct: 1128 QLG 1130
Score = 111 (44.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 28/82 (34%), Positives = 40/82 (48%)
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
ST +S + +Y+ G+N NGQLG+G PTK L + Q A G E
Sbjct: 891 STSLVENSVPSRKCSVYVLGENGNGQLGMGNGTPVQYKQPTKNTQLPDVV--QVAAGGEH 948
Query: 189 SVAVTGGGKVLSWGAGGSGRLG 210
+A+T K+ +WG G+LG
Sbjct: 949 CIALTHDNKIYTWGDNSHGQLG 970
Score = 106 (42.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 41/123 (33%), Positives = 50/123 (40%)
Query: 101 GQLG-ISENIGYSLEPLRIS-------GLKK--EVVQISTGYHHSSAITVDGELYMWGKN 150
GQLG + NI L PL LK V I +G HS I G+ WG N
Sbjct: 1127 GQLGRTAANIANCLNPLLCDFPGNSSRALKNPDNVSTIGSGKFHSFVIKESGDFLAWGYN 1186
Query: 151 SNGQLGLGKKAAKV------IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Q AA V + P+ V L G G + SVA+T GG+ LSWG+
Sbjct: 1187 KFAQTAFVPPAASVLRRDLKVDKPSTVASLRGQRVHFPTGGVDFSVALTAGGQCLSWGSF 1246
Query: 205 GSG 207
G
Sbjct: 1247 QDG 1249
Score = 62 (26.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 293 VVCGGYHTCVLTSGGELYTWGSNEN 317
V G HT +T+GG+ WGSN++
Sbjct: 1299 VSAGWTHTIAVTNGGKALGWGSNDH 1323
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 56/215 (26%), Positives = 99/215 (46%)
Query: 53 LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS 112
+GS ES P+ E + ++ C + + +G V++ GLN+ GQ G +E G
Sbjct: 164 VGSEESPLLPLSFPTSEP--IISIHCSMDTSFVVDSSGAVFSFGLNEDGQCG-NEAYGIQ 220
Query: 113 LEPLRISG-LKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
EP ++ G ++ +Q +G + A + +GE+++WG+ GQ G A I + T
Sbjct: 221 WEPAKVRGDVEGSKIQKVSGSTDTLLACSENGEIFIWGQTEYGQAA-G--ATDEIQLNTS 277
Query: 171 VECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+ + + SV G V WG G LG G E+ L ++ ++
Sbjct: 278 RHVANSLGPIICVDSTQSSVVARNSRGNVFVWGVGV---LGMGPEAESL---KTPTQMDQ 331
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
L +G V +AG + I+E+GR++I+G+
Sbjct: 332 PLF---DGKMVTSVSAGNSCMSAINEDGRLFIWGE 363
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 58/260 (22%), Positives = 112/260 (43%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSL----EPLR-ISGLKKE-VVQI 128
++ G AH+L T G V+A G N+FGQ G + EN+ Y + PL +S E ++ I
Sbjct: 127 ISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEESPLLPLSFPTSEPIISI 185
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFE 187
S + G ++ +G N +GQ G +A + P KV + G ++ + +
Sbjct: 186 HCSMDTSFVVDSSGAVFSFGLNEDGQCG--NEAYGIQWEPAKVRGDVEGSKIQKVSGSTD 243
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+A + G++ WG G+ + L R + +I ++ + + A
Sbjct: 244 TLLACSENGEIFIWGQTEYGQAAGATDEIQLNTSRHVANSLGPIIC-VDSTQSSVVAR-- 300
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG--GYHTCV--L 303
+ G V+++G + + E + P+ + + + ++V ++C+ +
Sbjct: 301 ------NSRGNVFVWGVGVLG--MGPEAESLKTPTQMDQPLFDGKMVTSVSAGNSCMSAI 352
Query: 304 TSGGELYTWGSNENGCLGIG 323
G L+ WG N LG+G
Sbjct: 353 NEDGRLFIWGENRYSSLGLG 372
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 71/295 (24%), Positives = 129/295 (43%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG-----ISENIGY 111
E+R+ P + F S+K ++ G +LF ++ +Y G+N+ Q+G I++ Y
Sbjct: 53 EARF-PKRIAYFNTKSIKFISSGFGFSLFASKNR-LYGAGINNRFQIGGQLTNINKYQDY 110
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---------LGKKAA 162
+ +I+ E+++IS+G HS T G ++ G N+ GQ G +G + +
Sbjct: 111 YISAKKINIPGDEILEISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEES 169
Query: 163 KVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++P+ PT +S + S V G V S+G G+ G+ G
Sbjct: 170 PLLPLSFPTSEPIIS------IHCSMDTSFVVDSSGAVFSFGLNEDGQCGN----EAYGI 219
Query: 221 LRSTSEYTPRLIK-ELEGVKV-KIAAAGFLHSACIDENGRVYIFGDR-------AVDKML 271
++ P ++ ++EG K+ K++ + AC ENG ++I+G A D++
Sbjct: 220 -----QWEPAKVRGDVEGSKIQKVSGSTDTLLAC-SENGEIFIWGQTEYGQAAGATDEIQ 273
Query: 272 FQEGNHARRPSLISKLPYSEEVVC-GGYHTCVLT--SGGELYTWGSNENGCLGIG 323
H S P ++C + V+ S G ++ WG G LG+G
Sbjct: 274 LNTSRHVAN----SLGP----IICVDSTQSSVVARNSRGNVFVWGV---GVLGMG 317
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 63/233 (27%), Positives = 105/233 (45%)
Query: 92 VYATGLNDFGQLGISEN--IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
+Y G+ G+LG+S++ + ++ P++ + ++V Q+ G H+ A+T GEL+ WG
Sbjct: 343 LYICGVGRGGRLGLSDDQRVRFTYVPVQGALADRKVTQVVLGQDHTMAVTDKGELWTWGS 402
Query: 150 NSNGQLG--LGKKAAK-VIPIPTKVECLSGIFTKQAALGFE----QSVAVTGGGKVLSWG 202
N+ QLG L A K P+ + + G K+ +G SVA T V WG
Sbjct: 403 NAYSQLGYALPPPAKKDEEPMSLAPKQVFGALKKEVVIGVSASAIHSVAHTTNS-VFCWG 461
Query: 203 AGGSGRLGHGQESSILGFLRSTS-EYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
SG+L S RS + TPR + L + + +A + + N V
Sbjct: 462 KN-SGQLALMDADS-----RSLEVQQTPRKVAASLFSAPIVMVSAIDKATTVLLANHIVC 515
Query: 261 IFGDRAVDKMLFQEGN-----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
+F + + + F E + H P+++ L Y + G C +TSGGE
Sbjct: 516 VFTNYGYNMVKFPEIDPFATYHISNPAVV--LGY-DAAASKGQRICHITSGGE 565
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 49/142 (34%), Positives = 70/142 (49%)
Query: 44 GNGDYGRLGLGSLES-RWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G G GRLGL + R+ V V A + + G HT+ +T+ G ++ G N +
Sbjct: 347 GVGRGGRLGLSDDQRVRFTYVPVQGALADRKVTQVVLGQDHTMAVTDKGELWTWGSNAYS 406
Query: 102 QLGIS-------ENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
QLG + + SL P ++ G LKKEVV +S HS A T + ++ WGKNS
Sbjct: 407 QLGYALPPPAKKDEEPMSLAPKQVFGALKKEVVIGVSASAIHSVAHTTNS-VFCWGKNS- 464
Query: 153 GQLGL---GKKAAKVIPIPTKV 171
GQL L ++ +V P KV
Sbjct: 465 GQLALMDADSRSLEVQQTPRKV 486
>DICTYBASE|DDB_G0289237 [details] [associations]
symbol:tirA "Toll-Interleukin (TIR) receptor
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0006952 "defense
response" evidence=IMP] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000157 InterPro:IPR002110 Pfam:PF13676
PROSITE:PS50088 PROSITE:PS50104 SMART:SM00248 InterPro:IPR001357
dictyBase:DDB_G0289237 Pfam:PF00533 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007165 GO:GO:0006952 GO:GO:0008283 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GenomeReviews:CM000154_GR GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AAFI02000131
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 SUPFAM:SSF52200 RefSeq:XP_636358.1
ProteinModelPortal:Q54HT1 EnsemblProtists:DDB0232375 GeneID:8627031
KEGG:ddi:DDB_G0289237 eggNOG:NOG261364 InParanoid:Q54HT1
OMA:WRAEITR Uniprot:Q54HT1
Length = 1336
Score = 139 (54.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 52/193 (26%), Positives = 86/193 (44%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV-YATG-LND 99
+WGN + + L ++ CS HS+ + G HT+ L + G + Y G N
Sbjct: 361 IWGNIKSNQK-VEQLADHYQVDYCSVGGSHSV--MIKRGIHTVGLNKFGQLGYKNGNTNC 417
Query: 100 FG-----QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G +L I I S+ + + LKK V+ +S G + +T +G+++ WGKN GQ
Sbjct: 418 IGGGGNNKLMIENQIQRSISIINQNFLKK-VLMVSCGKDFNVLLTNEGQVFSWGKNDQGQ 476
Query: 155 LGLGKKAAK------VIPIPTKVECLSGIFTKQAALGFEQSVAV-----TGGG-KVLSWG 202
LGLG +K ++ + S F + G S+A+ T G ++ WG
Sbjct: 477 LGLGNSDSKENYEIKLVNFDDPYDSNSNKFISFISCGGNHSIAIESNSSTDGNCRLYGWG 536
Query: 203 AGGSGRLGHGQES 215
+ G++G S
Sbjct: 537 SNSQGQIGEKYSS 549
>ASPGD|ASPL0000075377 [details] [associations]
symbol:AN10609 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001303
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
EnsemblFungi:CADANIAT00005518 HOGENOM:HOG000197481 OMA:QRIECGR
Uniprot:C8V9T3
Length = 575
Score = 118 (46.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 65/248 (26%), Positives = 106/248 (42%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WGN Y + S ES + P S F+ + L+ L G + E G L +
Sbjct: 113 IWGNNKYRVVDPESKESVIKTPRRLSYFDSNVLRDLKLGETSGAAIIENG-----DLVQW 167
Query: 101 GQLGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+ G SE +P + ++G K ++ +S + A++ DG++Y + + Q GK
Sbjct: 168 GK-GYSET---EFKPTKTLTG--KNLISLSMSHDRIVALSSDGKVYSLPVSKHDQTS-GK 220
Query: 160 KAAKV--IPIPTKVECLS-GIFTKQAALGFEQSVAVTGG----------GKVLSWGAGGS 206
KA + +P + +S + LG E+ VA++GG G+V S +
Sbjct: 221 KAEEKSWLPFSSGKSSMSYRLIQPILKLG-EKIVAISGGLEHVLLLTSSGRVFSAVSSTE 279
Query: 207 GRLGHGQESSILGFLRSTSEY----TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
GQ + G +T P +K GVKV A G HS + +NG V F
Sbjct: 280 NFPSFGQ-LGVPGLTWATRPPGPVDAPHEVKTPNGVKVAQIATGDYHSLLLTKNGNVLAF 338
Query: 263 GDRAVDKM 270
GD + ++
Sbjct: 339 GDNSFGQL 346
Score = 113 (44.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 47/177 (26%), Positives = 76/177 (42%)
Query: 52 GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT-----GLNDFGQLGIS 106
G S+ R + EK + A++ G H L LT +G V++ FGQLG+
Sbjct: 233 GKSSMSYRLIQPILKLGEK--IVAISGGLEHVLLLTSSGRVFSAVSSTENFPSFGQLGVP 290
Query: 107 ENIGYSLEPLRISG---LKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG- 158
+ P + +K +V QI+TG +HS +T +G + +G NS GQLGLG
Sbjct: 291 GLTWATRPPGPVDAPHEVKTPNGVKVAQIATGDYHSLLLTKNGNVLAFGDNSFGQLGLGF 350
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ + PT + + ++ + VA G + G+ G G +S
Sbjct: 351 DPNSPFLDTPTPI-LMESLYRDSSRSPRATGVAAGGANSFFTVDVHQDGQ-GQGSKS 405
Score = 55 (24.4 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 201 WGAGGSGRLGHGQES-SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
WGA G+G+ H Q+ ++L L EY + L +++ + G H A + +N
Sbjct: 421 WGALGNGKWTHLQDHPTLLKALSGLVEYD-EATQRLLPIRLNDISVGTTHVAAVLDN 476
Score = 46 (21.3 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 195 GGKVLSWGAGGSGRLGHGQESSIL--GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V+ WG +LG G+ S++ + + E KEL +++ A G +
Sbjct: 494 GLDVVWWGGNEHFQLGTGKRSNLSKPAHINVSPETVSLDDKELARLQIMPAYRGIVGDRS 553
Query: 253 IDENGRV 259
+D RV
Sbjct: 554 VDMRQRV 560
Score = 41 (19.5 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 305 SGGELYTWGSNENGCLGIG 323
+G ++ WG NE+ LG G
Sbjct: 493 AGLDVVWWGGNEHFQLGTG 511
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 131 (51.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 60/246 (24%), Positives = 106/246 (43%)
Query: 42 LWGNGDY--GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
L+G GD G+LG G + + + ++++ G ++ + G + G
Sbjct: 488 LFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVGVGNYFSVICCDRGTLLTFGTAK 547
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG+ ++ S +P+ + L +E ++ I G+ H A+ GE WG N GQLGL
Sbjct: 548 --NLGLGKDAKDSAKPMLLEQLLRENIKDIYCGHDHVVAVLESGECLGWGSNQYGQLGL- 604
Query: 159 KKAAKVIPIPTKV------ECLSGIF------TKQAALGF---EQSVAVTGGGKVLSWGA 203
+ PTKV L G F K+ G + ++ ++ G +++ G+
Sbjct: 605 -PTLEHFFAPTKVFFLNEATALYGPFQIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMGS 663
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPR-LIKE---LEGVKVKIA--AAGFLHSACIDENG 257
+L Q +GF + TP + + L+G ++ + G HS I E+G
Sbjct: 664 NKHNKLNLTQR---VGFFTKEKK-TPNDYVNKPTILQGFPERVVDFSVGSYHSGVILESG 719
Query: 258 RVYIFG 263
+V IFG
Sbjct: 720 QVMIFG 725
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 69/276 (25%), Positives = 116/276 (42%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS-----ENIGYSLEPLRISGLKKEVV 126
S+K +A HT+ LT ++ G N GQLG EN G +E L+ G +++
Sbjct: 468 SIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMEN-GRLVESLK--G--RDIQ 522
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKV-ECLSGIFT-KQAA 183
+ G + S G L +G N LG K +AK + + + E + I+
Sbjct: 523 SVGVGNYFSVICCDRGTLLTFGTAKNLGLGKDAKDSAKPMLLEQLLRENIKDIYCGHDHV 582
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR-STSEYTPRLIKELEGVKVKI 242
+ +S G G +G G L H + + FL +T+ Y P I K+
Sbjct: 583 VAVLESGECLGWGSN-QYGQLGLPTLEHFFAPTKVFFLNEATALYGPFQIPMPSNKKIVY 641
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQE-----------GNHARRPSLISKLPYS 290
AG + + ++G + G +K+ L Q ++ +P+++ P
Sbjct: 642 GKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTILQGFP-- 699
Query: 291 EEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
E VV G YH+ V+ G++ +G N+N LG+G
Sbjct: 700 ERVVDFSVGSYHSGVILESGQVMIFGRNDNTELGLG 735
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 100 (40.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG +HT VLT GE+YT+GSN+ G LG G
Sbjct: 970 QVACGLHHTVVLTLAGEVYTFGSNQYGQLGSG 1001
Score = 98 (39.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 26/93 (27%), Positives = 41/93 (44%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P+L++ V A G H+ + G VY FG ++ + P +
Sbjct: 957 PQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQVPG 1016
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+V G HT +LTS G +YT+G+ + G LG
Sbjct: 1017 AISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLG 1049
Score = 83 (34.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 27/109 (24%), Positives = 50/109 (45%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P + + H + AC + F+T+TG + G D + +G+ E L
Sbjct: 697 KPKKMTKIDGHVVVHAACNNGTSAFVTKTGKLIMYG-KDTAHC---DAMGFVSELL---- 748
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKKAAKVIPIP 168
++ V +++ G H A+ G+L+ +G N+ GQ G + K V +P
Sbjct: 749 -EQHVTKVALGKAHCVALNAKGQLFSFGLNNKGQCGRIFNKLQPVKDVP 796
>SGD|S000004067 [details] [associations]
symbol:FMP25 "Protein required for assembly of respiratory
complex III" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IMP] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
SGD:S000004067 INTERPRO:IPR000408 Pfam:PF00415 EMBL:BK006945
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0031305
EMBL:U53880 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0034551 EMBL:Z73250 EMBL:Z73249 EMBL:AY723844
PIR:S64909 RefSeq:NP_013178.1 ProteinModelPortal:Q08023 SMR:Q08023
DIP:DIP-4474N IntAct:Q08023 MINT:MINT-504101 STRING:Q08023
PaxDb:Q08023 PeptideAtlas:Q08023 EnsemblFungi:YLR077W GeneID:850766
KEGG:sce:YLR077W CYGD:YLR077w HOGENOM:HOG000111193 OMA:KLIEPED
OrthoDB:EOG4ZCXDB NextBio:966924 Genevestigator:Q08023
GermOnline:YLR077W Uniprot:Q08023
Length = 583
Score = 118 (46.6 bits), Expect = 0.00048, P = 0.00048
Identities = 37/119 (31%), Positives = 54/119 (45%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV-DGELYMWGKNS 151
+A G FG+LG + +P++I K++ S G H T + E+ WG N
Sbjct: 463 FAFGNGLFGELGNNTFKNSQCDPIKIKSDDKKLTNWSCGSHCVFTETEQENEVIAWGNND 522
Query: 152 NGQLGLGKKA---AKVIPIPTKVEC------LSGIFTKQAALGFEQSVAVTGGGKVLSW 201
+GQLG+GKK AK + IP ++ L I+ + L EQ V G L W
Sbjct: 523 HGQLGIGKKTMKCAKPMNIPEVLKPGQDTTDLDSIYNSKLHLKKEQRVVTNGNKSCLYW 581
>UNIPROTKB|G4NDH5 [details] [associations]
symbol:MGG_00913 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:CM001235 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
RefSeq:XP_003718048.1 ProteinModelPortal:G4NDH5
EnsemblFungi:MGG_00913T0 GeneID:2674805 KEGG:mgr:MGG_00913
Uniprot:G4NDH5
Length = 578
Score = 103 (41.3 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 40/127 (31%), Positives = 57/127 (44%)
Query: 82 HTLFLTETGCVY--ATGLNDF---GQLGI------SENIGYSLEPLRISGLKKE-VVQIS 129
H L LT G V+ A+ ++ GQLGI + G +P + GL V QI+
Sbjct: 266 HCLMLTSHGRVFSAASSTANYPSKGQLGIPGLTWLTRPKGPFDQPHEVKGLPPAGVSQIA 325
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLG-KKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
G +HS A+ + L+ WG NS+GQLG + I P V L+ + T E
Sbjct: 326 AGNYHSLALDKNSNLHAWGDNSSGQLGFEVNPQSPTIDTPKAVP-LTRLLTSGGVQRSEI 384
Query: 189 SVAVTGG 195
+ GG
Sbjct: 385 TSIAAGG 391
Score = 54 (24.1 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 19/76 (25%), Positives = 37/76 (48%)
Query: 189 SVAVTGGGKVLSW--GAGGSGRLGHGQ---ESSILGFLRSTS---EYTPRLIKELEGVKV 240
S+ G +W GAG G LG+G+ S+ +++ S EY R +++ + +
Sbjct: 400 SIPANGRPTAEAWSCGAGLQGELGNGKWIHMSTAPAKMKALSGMAEYDDRT-QQMVPIGI 458
Query: 241 KIAAAGFLHSACIDEN 256
+ + G H+A + +N
Sbjct: 459 RALSVGTTHAAAVMDN 474
Score = 40 (19.1 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 306 GGELYTWGSNENGCLGIG 323
G ++ WG NE LG G
Sbjct: 489 GSDVMWWGGNEFYQLGTG 506
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.137 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 323 323 0.00086 116 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 222
No. of states in DFA: 616 (65 KB)
Total size of DFA: 224 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.95u 0.16s 25.11t Elapsed: 00:00:01
Total cpu time: 25.09u 0.16s 25.25t Elapsed: 00:00:02
Start: Mon May 20 15:26:16 2013 End: Mon May 20 15:26:18 2013
WARNINGS ISSUED: 1