BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020659
(323 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/320 (67%), Positives = 262/320 (81%), Gaps = 4/320 (1%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
RS +++ L+ KLG LG C+R SS ++RFAALWGNGD+GRLGLGSLES+WRP
Sbjct: 3 RSCMRVSQSALQS--KLG--LGFCRRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRPA 58
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
VCSAF+ HSL A+ACGGAHTLFLTE+GCVYA GLNDFGQLG+S + Y+ EPL +S L K
Sbjct: 59 VCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPK 118
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+++ I+ GY+HS+AIT DGELYMWGKNSNGQLGLGKKAA + +P+KVECL+GI K A
Sbjct: 119 KIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVA 178
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
LG E SVA T G+ LSWGAGGSGRLGHG ESS+LGF R++SEY PRLI+ LEG+KVK
Sbjct: 179 LGSEHSVAATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNV 238
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
AAG LHSACIDENG V+IFG+RA+DK F+E +A PS+IS+LPYS++V CGGYHTCV+
Sbjct: 239 AAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATAPSMISELPYSKQVACGGYHTCVI 298
Query: 304 TSGGELYTWGSNENGCLGIG 323
+S GEL+TWGSNENGCLG+G
Sbjct: 299 SSSGELFTWGSNENGCLGMG 318
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 104/229 (45%), Gaps = 24/229 (10%)
Query: 43 WGNGDYGRLGLGS---------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG G GRLG G S +RP + E +K +A G H+ + E G V+
Sbjct: 196 WGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVF 255
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G + G E + P IS L Q++ G +H+ I+ GEL+ WG N NG
Sbjct: 256 IFGERAMDKFGFREAKN-ATAPSMISELPYSK-QVACGGYHTCVISSSGELFTWGSNENG 313
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTK----QAALGFEQSVAVTGGGKVLSWGAGGS-GR 208
LG+G + I P ++E G F+K Q + G++ + A++ G V +WG GGS G
Sbjct: 314 CLGMG--FMETIHFPERIE---GPFSKNPVSQVSCGWKHTAAISEG-NVFTWGWGGSYGT 367
Query: 209 LGHGQESS--ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
SS LG P++++ E V+ + GF H+ I E
Sbjct: 368 FSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHTGAILE 416
>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 417
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/300 (69%), Positives = 246/300 (82%)
Query: 24 LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
LG R S +RFAALWGNGDYGRLGLG+L+S+W+PVVC AF +L A+ACGGAHT
Sbjct: 18 LGFPTRSFSRDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHT 77
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
LFLTE GCVYATGLNDFGQLG+SE+ YS+EPL + G +K+VVQIS GY+HS AITVDGE
Sbjct: 78 LFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGE 137
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LYMWGKN++GQLGLGK+A ++P+PTKVE L GI K AALG E SVA++ GG SWG
Sbjct: 138 LYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGAAFSWGI 197
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G SGRLGHG ESS+LGF +S SEYTPRLIK+LEG+KVK AAG L+SAC DENG V++FG
Sbjct: 198 GVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVFG 257
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+R ++K+ +E + A +PSLIS+LP S+EV CGGYHTCVLT+ GELYTWGSNENGCLGIG
Sbjct: 258 ERGIEKLRLKEMSDATKPSLISELPSSKEVACGGYHTCVLTNSGELYTWGSNENGCLGIG 317
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 26/230 (11%)
Query: 43 WGNGDYGRLGLGSLES---------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG G GRLG G S + P + E +K +A G ++ E GCV+
Sbjct: 195 WGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVF 254
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G +L + E + + +P IS L +++ G +H+ +T GELY WG N NG
Sbjct: 255 VFGERGIEKLRLKE-MSDATKPSLISELPSSK-EVACGGYHTCVLTNSGELYTWGSNENG 312
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTK----QAALGFEQSVAVTGGGKVLSWGAGGSG-- 207
LG+G ++ VI +P KV+ G F K Q + G++ + A++ G+V +WG GGS
Sbjct: 313 CLGIG--SSDVIHLPEKVQ---GPFLKSSVSQVSCGWKHTAAIS-EGRVFTWGWGGSNGT 366
Query: 208 --RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+GH S LG P + E VK + GF H+ I E
Sbjct: 367 FSEVGH-SSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILE 415
>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/315 (70%), Positives = 258/315 (81%), Gaps = 6/315 (1%)
Query: 15 KQDIKLGSKLGIC-KRWISSTL---QRRFAALWGNGDYGRLGLGSLESRWRPVV--CSAF 68
K + +G LG C KRW+SS+ ++R AA+WGNGDYGRLG G+L+S WRP + S+F
Sbjct: 3 KNSVLIGGGLGYCYKRWMSSSSSEGRKRSAAVWGNGDYGRLGYGNLDSMWRPKLMNSSSF 62
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
+LK+++CGGAHTLFLTETG VYATGLNDFGQLG+S N Y +EPL +SGLKKE+VQI
Sbjct: 63 HNSNLKSISCGGAHTLFLTETGRVYATGLNDFGQLGVSNNTTYCMEPLEVSGLKKEIVQI 122
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S GYHHS AITVDGELY WGKNSNGQLGLGKKA V+P+PTKVECLSGI K AL E
Sbjct: 123 SAGYHHSCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVECLSGINIKMVALASEH 182
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+AVT GG+ LSWG GGSGRLGHG +SS+LGF RS+SEYTPR IK+LEGVKVK AAG L
Sbjct: 183 SIAVTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLL 242
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
HSACIDENG VYIFG++AVDK+ F + N+A PS+I KLPYS+EV CGGYHTCV+TSGGE
Sbjct: 243 HSACIDENGSVYIFGEKAVDKLAFGDANNATTPSMIGKLPYSQEVACGGYHTCVITSGGE 302
Query: 309 LYTWGSNENGCLGIG 323
LYTWGSNENGCLG G
Sbjct: 303 LYTWGSNENGCLGNG 317
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 33/222 (14%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG 110
LG S + P E +K +A G H+ + E G VY G +L +
Sbjct: 212 LGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAFGD-AN 270
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+ P I L +++ G +H+ IT GELY WG N NG LG G + V+ IP +
Sbjct: 271 NATTPSMIGKLPYSQ-EVACGGYHTCVITSGGELYTWGSNENGCLGNG--SIDVLHIPER 327
Query: 171 VECLSGIF----TKQAALGFEQSVAVTGGGKVLSWGAGGS------------GRLGHGQE 214
VE G F ++ + G++ + A++ G V +WG GGS G+LGHG +
Sbjct: 328 VE---GPFLRSPVEKVSCGWKHTAAIS-EGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDD 383
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+ P L+ + +K + GF H+ I E+
Sbjct: 384 FDYV---------NPTLVAFEKKMKALEVSCGFNHTGAILES 416
>gi|255549098|ref|XP_002515604.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Ricinus communis]
gi|223545242|gb|EEF46749.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Ricinus communis]
Length = 374
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/298 (67%), Positives = 240/298 (80%), Gaps = 2/298 (0%)
Query: 28 KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLF 85
+RW+SS +R+AA+WGNGD+GRLG GSL+S+WRP ++ S F HSLK++ACGGAHTLF
Sbjct: 11 RRWMSSEAGKRYAAVWGNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHTLF 70
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
LTETGCVYATGLNDFGQLGIS N+ Y+ EP+++SGL+KE++QIS GYHHS AITVDGELY
Sbjct: 71 LTETGCVYATGLNDFGQLGISGNLSYTTEPVKVSGLQKEIMQISAGYHHSCAITVDGELY 130
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
MWG+NSNGQLGLGKKA +++P+PTKVE L+G+ K ALG E S+AVT G+ LSWG GG
Sbjct: 131 MWGRNSNGQLGLGKKAQRIVPLPTKVEYLNGLTIKLVALGSEHSIAVTDRGEALSWGLGG 190
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
GRLGH +S F STSEYTPR IK+LE VKVK AAG LHSACID NG V++FG+
Sbjct: 191 FGRLGHSNQSGTFRFWTSTSEYTPRSIKKLEEVKVKSVAAGLLHSACIDVNGSVFVFGEV 250
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+VD+ F E A PS++ KLP + EV CGGYHTCV+TSGGELY WG NENGCLGIG
Sbjct: 251 SVDRTGFGEAIGAEIPSMVGKLPCANEVSCGGYHTCVVTSGGELYAWGVNENGCLGIG 308
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+WG G+LGLG R P+ ++K +A G H++ +T+ G + GL
Sbjct: 131 MWGRNSNGQLGLGKKAQRIVPLPTKVEYLNGLTIKLVALGSEHSIAVTDRGEALSWGLGG 190
Query: 100 FGQLGISENIGY--------SLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
FG+LG S G P I L++ +V ++ G HS+ I V+G ++++G+
Sbjct: 191 FGRLGHSNQSGTFRFWTSTSEYTPRSIKKLEEVKVKSVAAGLLHSACIDVNGSVFVFGEV 250
Query: 151 SNGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
S + G G+ IP + K+ C + + G + VT GG++ +WG +G L
Sbjct: 251 SVDRTGFGEAIGAEIPSMVGKLPC-----ANEVSCGGYHTCVVTSGGELYAWGVNENGCL 305
Query: 210 GHGQESSILG-------FLRSTSE 226
G G +S+ FLRS E
Sbjct: 306 GIGSFNSLHAPERVQGPFLRSPVE 329
>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Cucumis sativus]
Length = 386
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/295 (66%), Positives = 236/295 (80%), Gaps = 1/295 (0%)
Query: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
RW +S +RF A+WGNGD+GRLGLG+L+S+W PV CS+F++ LK +ACGGAHTLFLTE
Sbjct: 71 RWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTE 130
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G VYATGLN+FGQLGIS+ +S EP+ + + KE + IS GY+HS +T DGELYMWG
Sbjct: 131 SGRVYATGLNNFGQLGISDEKRFSTEPVEVR-IPKEAMHISAGYNHSCVVTADGELYMWG 189
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
NSNGQLGLGKK+AK + +PTKV+ L GI K+AALG + S+AV GG+V SWG G SGR
Sbjct: 190 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGR 249
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG ES+ LGFL+STSE+TPRLIKELEG+KVK AAG LHSAC+DENG VYIFG+RA +
Sbjct: 250 LGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATN 309
Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ F E N A PSLIS L EEV CGGYHTCVLT GG+LY+WGSNENGCLG G
Sbjct: 310 RVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNG 364
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 42 LWGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+WG G+LGLG S ++ P + + +K A G H++ + + G V++ G
Sbjct: 187 MWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGR 246
Query: 100 FGQLGI---SENIGY-----SLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
G+LG S +G+ P I L+ +V ++ G HS+ + +G +Y++G+
Sbjct: 247 SGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGER 306
Query: 151 SNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+ ++ G+ P I T ++C ++ A G + +T GG + SWG+ +G
Sbjct: 307 ATNRVSFGEANKATTPSLISTLLDC------EEVACGGYHTCVLTKGGDLYSWGSNENGC 360
Query: 209 LGHGQES 215
LG+G S
Sbjct: 361 LGNGSTS 367
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 43 WGNGDYGRLG-------LGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG+G GRLG LG L+S P + E +K +A G H+ + E G VY
Sbjct: 242 WGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVY 301
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G ++ E + P IS L + +++ G +H+ +T G+LY WG N NG
Sbjct: 302 IFGERATNRVSFGE-ANKATTPSLISTLL-DCEEVACGGYHTCVLTKGGDLYSWGSNENG 359
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTK 180
LG G + V +P +VE G F+K
Sbjct: 360 CLGNG--STSVSHLPERVE---GPFSK 381
>gi|356518818|ref|XP_003528074.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC4-like [Glycine max]
Length = 404
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/287 (67%), Positives = 241/287 (83%), Gaps = 1/287 (0%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
+RF ALWGNGD+GRLGLG+L+S+W+PVVC AF +LKA+ACGGAHTLFLT+ GCVYATG
Sbjct: 19 KRFVALWGNGDFGRLGLGNLDSQWKPVVCPAFRDRTLKAIACGGAHTLFLTDNGCVYATG 78
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LNDFGQLG+SE+ YS+EPL + G +K+VVQ+S GY+HS AITVDGELYMWGKN++ QLG
Sbjct: 79 LNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVDGELYMWGKNTSVQLG 138
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LGK+A ++P+PTKVE L+GI K AALG + S+A++ GG+ SWG G SGRLGHG ESS
Sbjct: 139 LGKRAPNIVPLPTKVEYLNGINIKMAALGSDHSLAISDGGEAFSWGVGVSGRLGHGHESS 198
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
ILGF +S SEYTPRLIK+LEG+KVK A+G L+SAC DENG V++FG+RA++++ + +
Sbjct: 199 ILGFFKSYSEYTPRLIKDLEGIKVKYVASGLLNSACTDENGSVFVFGERAIERLRLKAMS 258
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A +PSLI +LP S +VVCGGYHTCVLT+ GELYTW SNENGCLGIG
Sbjct: 259 DATKPSLIGELP-SSKVVCGGYHTCVLTNSGELYTWXSNENGCLGIG 304
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 43 WGNGDYGRLGLGSLES---------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG G GRLG G S + P + E +K +A G ++ E G V+
Sbjct: 183 WGVGVSGRLGHGHESSILGFFKSYSEYTPRLIKDLEGIKVKYVASGLLNSACTDENGSVF 242
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G +L + + + + +P I L ++ G +H+ +T GELY W N NG
Sbjct: 243 VFGERAIERLRL-KAMSDATKPSLIGELPSS--KVVCGGYHTCVLTNSGELYTWXSNENG 299
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTK----QAALGFEQSVAVTGGGKVLSWGAGGSG-- 207
LG+G ++ VI +P K+ G F K Q + G++ + A++ G+V +WG GGS
Sbjct: 300 CLGIG--SSDVIHLPEKI---XGPFLKSSVSQLSCGWKNTAAIS-EGRVFTWGWGGSNGT 353
Query: 208 --RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+GH S LG P + E VK + GF H+ I E
Sbjct: 354 FSEVGH-SSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILE 402
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+ +G V WG G GRLG G S++ P + +K A G
Sbjct: 13 SLRASGKRFVALWGNGDFGRLGLGNLD---------SQWKPVVCPAFRDRTLKAIACGGA 63
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISKLPYSEEVVCGGY-HTCVLTSG 306
H+ + +NG VY G ++ E H + P + V GY H+C +T
Sbjct: 64 HTLFLTDNGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVD 123
Query: 307 GELYTWGSNENGCLGIG 323
GELY WG N + LG+G
Sbjct: 124 GELYMWGKNTSVQLGLG 140
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/295 (66%), Positives = 236/295 (80%), Gaps = 1/295 (0%)
Query: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
RW +S +RF A+WGNGD+GRLGLG+L+S+W PV CS+F++ LK +ACGGAHTLFLTE
Sbjct: 88 RWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTE 147
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+G VYATGLN+FGQLGIS+ +S EP+ + + KE + IS GY+HS +T DGELYMWG
Sbjct: 148 SGRVYATGLNNFGQLGISDEKRFSTEPVEVR-IPKEAMHISAGYNHSCVVTADGELYMWG 206
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
NSNGQLGLGKK+AK + +PTKV+ L GI K+AALG + S+AV GG+V SWG G SGR
Sbjct: 207 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGR 266
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG ES+ LGFL+STSE+TPRLIKELEG+KVK AAG LHSAC+DENG VYIFG+RA +
Sbjct: 267 LGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATN 326
Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ F E N A PSLIS L EEV CGGYHTCVLT GG+LY+WGSNENGCLG G
Sbjct: 327 RVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNG 381
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 109/238 (45%), Gaps = 42/238 (17%)
Query: 43 WGNGDYGRLG-------LGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG+G GRLG LG L+S P + E +K +A G H+ + E G VY
Sbjct: 259 WGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVY 318
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G ++ E + P IS L + +++ G +H+ +T G+LY WG N NG
Sbjct: 319 IFGERATNRVSFGE-ANKATTPSLISTLL-DCEEVACGGYHTCVLTKGGDLYSWGSNENG 376
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTK----QAALGFEQSVAVTGGGKVLSWGAGGS--- 206
LG G + V +P +VE G F+K + + G++ + A++GG + +WG GGS
Sbjct: 377 CLGNG--STSVSHLPERVE---GPFSKSPVSKVSCGWKHTAAISGGA-IFTWGWGGSHGT 430
Query: 207 ---------GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+LGHG + + P I E VKV + GF H+ I E
Sbjct: 431 FSVDGHSSGGQLGHGSDVDYV---------KPTKIDLGENVKVVQVSCGFNHTGAILE 479
>gi|30682540|ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana]
gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 434
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/308 (66%), Positives = 250/308 (81%)
Query: 14 LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
L +D KLG C RW+SS +RFAA+WG+GDYGRLGLG+L+S+W P VCSA HS+
Sbjct: 25 LLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSI 84
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
A+ACGGAHTLFLTET V+ATGLND GQLG+S+ ++++PL +SGL K+++ IS GY+
Sbjct: 85 TAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYY 144
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI + ALG E SVAVT
Sbjct: 145 HSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVT 204
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV AAG LHSAC
Sbjct: 205 DGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACT 264
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
DENG ++FG+++++KM F +A PS+IS++PY+EEV CGGYHTCV+T GGELYTWG
Sbjct: 265 DENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWG 324
Query: 314 SNENGCLG 321
SNENGCLG
Sbjct: 325 SNENGCLG 332
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A ++G ++G G + + P + S E + +ACGG HT +T G +Y G N+
Sbjct: 270 AFMFGEKSINKMGFGGVRNATTPSIIS--EVPYAEEVACGGYHTCVVTRGGELYTWGSNE 327
Query: 100 FGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMW---------- 147
G LG +++ S P+R+ G L+ V Q+S G+ H++AI+ D ++ W
Sbjct: 328 NGCLG-TDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAIS-DNNVFTWGWGGSHGTFS 385
Query: 148 --GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G +S GQLG G P V+ + + GF + AV
Sbjct: 386 VDGHSSGGQLGHGSDVD--YARPAMVDLGKNVRAVHISCGFNHTAAV 430
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG+G GRLG LG L S++TP + L + A G H+ + E RV+
Sbjct: 54 WGSGDYGRLG-------LGNL--DSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVF 104
Query: 261 IFGDRAVDKMLFQE-GNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENG 318
G ++ + +HA P +S L + G YH+ +T GELY WG N +G
Sbjct: 105 ATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNSSG 164
Query: 319 CLGIG 323
LG+G
Sbjct: 165 QLGLG 169
>gi|297810989|ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
gi|297319215|gb|EFH49637.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/306 (66%), Positives = 250/306 (81%)
Query: 16 QDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA 75
+D KLG C+RW+S+ +RFAA+WG+GDYGRLGLG+L+S+W P CSA HS++A
Sbjct: 27 KDSKLGPIGVSCRRWLSNESGKRFAAMWGSGDYGRLGLGNLDSQWTPAGCSALSDHSIRA 86
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ACGGAHTLFLTET V+ATGLND GQLG+S+ ++++PL +SGL K+++ IS GY+HS
Sbjct: 87 VACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHS 146
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI + ALG E SVAVT G
Sbjct: 147 AAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDG 206
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KVK AAG LHSAC DE
Sbjct: 207 GEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVKNVAAGLLHSACTDE 266
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
NG ++FG+R+++KM F +A PS+IS++PY+E V CGGYHTCV+T GGELYTWGSN
Sbjct: 267 NGSAFMFGERSINKMGFGGVRNATTPSIISEVPYAEGVACGGYHTCVVTRGGELYTWGSN 326
Query: 316 ENGCLG 321
ENGCLG
Sbjct: 327 ENGCLG 332
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
S + P + E +K +A G H+ E G + G ++G + + P
Sbjct: 235 NSEFTPRLIKELEGIKVKNVAAGLLHSACTDENGSAFMFGERSINKMGFG-GVRNATTPS 293
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
IS + ++ G +H+ +T GELY WG N NG LG P+ + L
Sbjct: 294 IISEVPY-AEGVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLES 352
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGS------------GRLGHGQESSILGFLRST 224
+ Q + G++ + A++ KV +WG GGS G+LGHG + + + R
Sbjct: 353 TVS-QVSCGWKHTAAISDN-KVFTWGWGGSHGTFSVDGHSSGGQLGHGSD---VDYAR-- 405
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
P ++ + V+ + GF H+A + E+
Sbjct: 406 ----PAMVDLGKNVRAVHISCGFNHTAAVLEH 433
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG+G GRLG LG L S++TP L ++ A G H+ + E RV+
Sbjct: 54 WGSGDYGRLG-------LGNL--DSQWTPAGCSALSDHSIRAVACGGAHTLFLTETRRVF 104
Query: 261 IFGDRAVDKMLFQE-GNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENG 318
G ++ + +HA P +S L + G YH+ +T GELY WG N +G
Sbjct: 105 ATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNSSG 164
Query: 319 CLGIG 323
LG+G
Sbjct: 165 QLGLG 169
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTET-----------G 90
WG+ + G LG S PV V F + ++ ++CG HT +++ G
Sbjct: 323 WGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNKVFTWGWGGSHG 382
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
G + GQLG ++ Y+ + G V IS G++H++A+
Sbjct: 383 TFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAV 430
>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 418
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/304 (59%), Positives = 229/304 (75%), Gaps = 11/304 (3%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACIDE G +
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTL 252
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+IFG + + F N RP+++ ++P+SEEV CGGYHTCV+T G+LY+WGSNENGC
Sbjct: 253 FIFGQKT--EKGFGRPNEEFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGC 310
Query: 320 LGIG 323
LG+G
Sbjct: 311 LGLG 314
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 42/237 (17%)
Query: 43 WGNGDYGRLGLGSLES---------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG GRLG G S + P + F+ +K +A G H+ + E G ++
Sbjct: 194 WGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLF 253
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGELYMWGKN 150
FGQ + G E R + + +E+ +++ G +H+ +T G+LY WG N
Sbjct: 254 I-----FGQK-TEKGFGRPNEEFRPN-IVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSN 306
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS---- 206
NG LGLG P K L + + + G++ + AV G + +WG GG+
Sbjct: 307 ENGCLGLGGTDMVRSPEILK-SSLFKLPVSKVSCGWKHT-AVVSGDDIYTWGWGGANGTF 364
Query: 207 --------GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+LGHG + + P ++ + + GF H+ I E
Sbjct: 365 FEEGHSSGGQLGHGND---------VDYFEPMMVPFGTNARAVHVSCGFNHTGAIYE 412
>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
Length = 418
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/291 (61%), Positives = 225/291 (77%), Gaps = 5/291 (1%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCV 92
++R AALWGNGDYGRLGLG LESRW P VC F + +LACGGAHTLFLT++G V
Sbjct: 28 RQRVAALWGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQSGRV 87
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ATGLNDFGQLG+ ++ ++LEP+ +SG + VV++S G HHS A+T DG+L++WG+NS
Sbjct: 88 FATGLNDFGQLGVGSSVTHTLEPVEVSGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSG 147
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLGLGK A KV+ PTKV+CL+ K ALG E S+AVT G+VLSWGA GSGRLGHG
Sbjct: 148 GQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHG 207
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
++SSILGF +TSEYTPRLIK +G+K+K AAG LHSACIDE G ++IFG + + F
Sbjct: 208 RQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKT--EKGF 265
Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N A RP+++ ++P+SEEV CGGYHTCV+T G+LY+WGSNENGCLG+G
Sbjct: 266 GRSNEAFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLG 316
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 42/237 (17%)
Query: 43 WGNGDYGRLGLGS---------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG GRLG G S + P + F+ +K +A G H+ + E G ++
Sbjct: 196 WGAAGSGRLGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLF 255
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGELYMWGKN 150
FGQ + G S E R + + +E+ +++ G +H+ +T G+LY WG N
Sbjct: 256 I-----FGQK-TEKGFGRSNEAFRPN-IVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSN 308
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS---- 206
NG LGLG P K L + + + G++ + AV G + +WG GG+
Sbjct: 309 ENGCLGLGGTDMVCSPEILK-SSLFKLPVSKVSCGWKHT-AVISGDDIYTWGWGGANGTF 366
Query: 207 --------GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+LGHG + + P ++ + + + GF H+ I E
Sbjct: 367 FEEGHSSGGQLGHGND---------VDYFEPMMVPFGKNARAVHVSCGFNHTGAIYE 414
>gi|13548329|emb|CAC35876.1| putative protein [Arabidopsis thaliana]
Length = 435
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/318 (61%), Positives = 242/318 (76%), Gaps = 19/318 (5%)
Query: 14 LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
L +D KLG C RW+SS +RFAA+WG+GDYGRLGLG+L+S+W P VCSA HS+
Sbjct: 25 LLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSI 84
Query: 74 KALACGGAHTLFLT----------ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
A+ACGGAHTLFLT ET V+ATGLND GQLG+S+ ++++PL +SGL K
Sbjct: 85 TAVACGGAHTLFLTVSDNKLTHVTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK 144
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+++ IS GY+HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI + A
Sbjct: 145 DILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVA 204
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
LG E SVAVT GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV
Sbjct: 205 LGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNV 264
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
AAG LHSAC DENG ++FG+++++KM F +A PS+IS++PY+EEV CG
Sbjct: 265 AAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACG------- 317
Query: 304 TSGGELYTWGSNENGCLG 321
GGELYTWGSNENGCLG
Sbjct: 318 --GGELYTWGSNENGCLG 333
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 21/135 (15%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS---------- 250
WG+G GRLG LG L S ++TP + L + A G H+
Sbjct: 54 WGSGDYGRLG-------LGNLDS--QWTPAVCSALSDHSITAVACGGAHTLFLTVSDNKL 104
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGE 308
+ E RV+ G ++ + +HA P +S L + G YH+ +T GE
Sbjct: 105 THVTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGE 164
Query: 309 LYTWGSNENGCLGIG 323
LY WG N +G LG+G
Sbjct: 165 LYMWGKNSSGQLGLG 179
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A ++G ++G G + + P + S E + +ACGG G +Y G N+
Sbjct: 280 AFMFGEKSINKMGFGGVRNATTPSIIS--EVPYAEEVACGG---------GELYTWGSNE 328
Query: 100 FGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMW---------- 147
G LG +++ S P+R+ G L+ V Q+S G+ H++AI+ D ++ W
Sbjct: 329 NGCLG-TDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAIS-DNNVFTWGWGGSHGTFS 386
Query: 148 --GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G +S GQLG G P V+ + + GF + AV
Sbjct: 387 VDGHSSGGQLGHGSDVD--YARPAMVDLGKNVRAVHISCGFNHTAAV 431
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 176/296 (59%), Positives = 225/296 (76%), Gaps = 10/296 (3%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
+RR AALWGNGDYGRLG+G+LESRW P C F + +LACGGAHTLFLT
Sbjct: 30 RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLT 89
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
E+G V+A GLNDFGQLGI ++ +SLEP+ +SG ++VV++S G HHS A+T DG+L+ W
Sbjct: 90 ESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAW 149
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+NS+GQLGLGK+A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA G+G
Sbjct: 150 GRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 209
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG +
Sbjct: 210 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 268
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+K + G+ RP+++ ++P+SEEV CGGYHTCV+T G+LY+WGSNENGCLG+G
Sbjct: 269 EKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLG 323
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 42/237 (17%)
Query: 43 WGNGDYGRLGLGS---------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG GRLG G S + P + + +K +A G H+ + E G ++
Sbjct: 203 WGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLF 262
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGELYMWGKN 150
FGQ + G S + LR + + +EV +++ G +H+ +T G+LY WG N
Sbjct: 263 I-----FGQK-TEKGFGRSGDELRPT-VVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSN 315
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS---- 206
NG LGLG P K +K + G++ + AV GG + +WG GG+
Sbjct: 316 ENGCLGLGGTDMVRSPEVLKSSLFKFPVSK-VSCGWKHT-AVISGGDIYTWGWGGANGTF 373
Query: 207 --------GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+LGHG + + P +++ + + + GF H+ I E
Sbjct: 374 FEEGHSSGGQLGHGND---------VDYFEPMMVEFGKNARAVHVSCGFNHTGAIFE 421
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 176/296 (59%), Positives = 225/296 (76%), Gaps = 10/296 (3%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
+RR AALWGNGDYGRLG+G+LESRW P C F + +LACGGAHTLFLT
Sbjct: 30 RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLT 89
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
E+G V+A GLNDFGQLGI ++ +SLEP+ +SG ++VV++S G HHS A+T DG+L+ W
Sbjct: 90 ESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAW 149
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+NS+GQLGLGK+A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA G+G
Sbjct: 150 GRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEVLSWGAAGAG 209
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG +
Sbjct: 210 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 268
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+K + G+ RP+++ ++P+SEEV CGGYHTCV+T G+LY+WGSNENGCLG+G
Sbjct: 269 EKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLG 323
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 42/237 (17%)
Query: 43 WGNGDYGRLGLGS---------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG GRLG G S + P + + +K +A G H+ + E G ++
Sbjct: 203 WGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLF 262
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGELYMWGKN 150
FGQ + G S + LR + + +EV +++ G +H+ +T G+LY WG N
Sbjct: 263 I-----FGQK-TEKGFGRSGDELRPT-VVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSN 315
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS---- 206
NG LGLG P K +K + G++ + AV GG + +WG GG+
Sbjct: 316 ENGCLGLGGTDMVRSPEVLKSSLFKFPVSK-VSCGWKHT-AVISGGDIYTWGWGGANGTF 373
Query: 207 --------GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+LGHG + + P +++ + + + GF H+ I E
Sbjct: 374 FEEGHSSGGQLGHGND---------VDYFEPMMVEFGKNARAVHVSCGFNHTGAIFE 421
>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 422
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 179/307 (58%), Positives = 226/307 (73%), Gaps = 13/307 (4%)
Query: 28 KRWISS--------TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKAL 76
RW+S+ RR AALWGNGDYGRLGLG+LESRW P C F + +L
Sbjct: 16 PRWLSTEAVAGSGEPAWRRVAALWGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASL 75
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSS 136
ACGGAHTLFLT++G V+ATGLNDFGQLGI + + ++P+ ++G ++VVQIS G HHS
Sbjct: 76 ACGGAHTLFLTQSGRVFATGLNDFGQLGIGSSTTHIVDPIEVTGFGEKVVQISAGNHHSC 135
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A+T DGEL++WGKNS+GQLGLGK KV+ P KV+ L+ + + ALG E S+AVT GG
Sbjct: 136 AVTADGELFVWGKNSSGQLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTEGG 195
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+ LSWGA G+GRLGHG +SSILGF +SEYTPRLIK L+GVK+K AAG LHSACIDE
Sbjct: 196 EALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEK 255
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
G ++IFG + + +F N A RP+++ ++ +SEEV CGGYHTC LT GG+LY+WGSNE
Sbjct: 256 GTLFIFGQKT--EKVFGRSNDAPRPTVVEEIQFSEEVACGGYHTCALTDGGDLYSWGSNE 313
Query: 317 NGCLGIG 323
NGCLG+G
Sbjct: 314 NGCLGLG 320
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLT-----------ETG 90
WG+ + G LGLG P V+ S K + ++CG HT ++ G
Sbjct: 309 WGSNENGCLGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVISGEDIYTWGWGGANG 368
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAI 138
+ G + GQLG ++ Y EP+ + G V +S G++H+ AI
Sbjct: 369 TFFEEGQSSGGQLGHGNDVDY-FEPMMVELGRNARAVHVSCGFNHTGAI 416
>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 175/291 (60%), Positives = 221/291 (75%), Gaps = 5/291 (1%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF---EKHSLKALACGGAHTLFLTETGCV 92
+RR AALWGNGD+GRLGLG+LESRW P C F +L+CGGAHTLFLTE G V
Sbjct: 29 RRRVAALWGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLSCGGAHTLFLTEGGRV 88
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ATGLNDFGQLGI ++ ++L+P+ +SG ++VVQIS G HHS A+T DGEL++WGKNS+
Sbjct: 89 FATGLNDFGQLGIGSSMPHTLDPVEVSGFHEKVVQISAGNHHSCAVTADGELFVWGKNSS 148
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLGLGK A KV+ P KV+ L+ + K ALG E S+ VT G+ LSWGA G GRLGHG
Sbjct: 149 GQLGLGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVTEDGEALSWGAAGGGRLGHG 208
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+SS LGF +++EYTPRLIK L+G+K+K AAG LHSACIDE G V+IFG + +K+L
Sbjct: 209 HKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKGTVFIFGQK-TEKVLG 267
Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ N A RPS++ ++ +SEEV CGGYHTC +T G+LY+WGSNENGCLG+G
Sbjct: 268 RS-NDAPRPSVVEEIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLGLG 317
>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
Length = 400
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/239 (59%), Positives = 187/239 (78%), Gaps = 2/239 (0%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
FLTE+G V+A GLNDFGQLGI ++ +SLEP+ +SG ++VV++S G HHS A+T DG+L
Sbjct: 62 FLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKL 121
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG+NS+GQLGLGK+A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA
Sbjct: 122 FAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAA 181
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+GRLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG
Sbjct: 182 GAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQ 241
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +K + G+ RP+++ ++P+SEEV CGGYHTCV+T G+LY+WGSNENGCLG+G
Sbjct: 242 K-TEKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLG 298
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 42/237 (17%)
Query: 43 WGNGDYGRLGLGS---------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG GRLG G S + P + + +K +A G H+ + E G ++
Sbjct: 178 WGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLF 237
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGELYMWGKN 150
FGQ + G S + LR + + +EV +++ G +H+ +T G+LY WG N
Sbjct: 238 I-----FGQK-TEKGFGRSGDELRPT-VVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSN 290
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS---- 206
NG LGLG P K +K + G++ + AV GG + +WG GG+
Sbjct: 291 ENGCLGLGGTDMVRSPEVLKSSLFKFPVSK-VSCGWKHT-AVISGGDIYTWGWGGANGTF 348
Query: 207 --------GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+LGHG + + P +++ + + + GF H+ I E
Sbjct: 349 FEEGHSSGGQLGHGND---------VDYFEPMMVEFGKNARAVHVSCGFNHTGAIFE 396
>gi|413924972|gb|AFW64904.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/238 (61%), Positives = 180/238 (75%), Gaps = 9/238 (3%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACIDE G
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKG 250
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLG G S R + P + +A G H+ + +NGRV+
Sbjct: 33 WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86
Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
G ++ + H P IS EV G +H+C +T+ G+L+ WG N G
Sbjct: 87 ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146
Query: 319 CLGIG 323
LG+G
Sbjct: 147 QLGLG 151
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 26/189 (13%)
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA-------LGFEQSVAVTGGGKV 198
+WG G+LGLG ++ P + F +AA G ++ +T G+V
Sbjct: 32 LWGNGDYGRLGLGSLESRWSPT------VCPFFLARAADPPASLACGGAHTLFLTQNGRV 85
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+ G G+LG G + + S + R+++ +AG HS + +G+
Sbjct: 86 FATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVE---------VSAGNHHSCAVTADGK 136
Query: 259 VYIFGDRAVDKMLFQEG--NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
++++G + ++ +G P+ + L + V G H+ +T GE+ +WG+
Sbjct: 137 LFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGA 196
Query: 315 NENGCLGIG 323
+G LG G
Sbjct: 197 AGSGRLGHG 205
>gi|413924969|gb|AFW64901.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 146/238 (61%), Positives = 179/238 (75%), Gaps = 9/238 (3%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACID G
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDGKG 250
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLG G S R + P + +A G H+ + +NGRV+
Sbjct: 33 WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86
Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
G ++ + H P IS EV G +H+C +T+ G+L+ WG N G
Sbjct: 87 ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146
Query: 319 CLGIG 323
LG+G
Sbjct: 147 QLGLG 151
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 26/189 (13%)
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA-------LGFEQSVAVTGGGKV 198
+WG G+LGLG ++ P + F +AA G ++ +T G+V
Sbjct: 32 LWGNGDYGRLGLGSLESRWSPT------VCPFFLARAADPPASLACGGAHTLFLTQNGRV 85
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+ G G+LG G + + S + R+++ +AG HS + +G+
Sbjct: 86 FATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVE---------VSAGNHHSCAVTADGK 136
Query: 259 VYIFGDRAVDKMLFQEG--NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
++++G + ++ +G P+ + L + V G H+ +T GE+ +WG+
Sbjct: 137 LFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGA 196
Query: 315 NENGCLGIG 323
+G LG G
Sbjct: 197 AGSGRLGHG 205
>gi|413924970|gb|AFW64902.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 261
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 178/235 (75%), Gaps = 9/235 (3%)
Query: 29 RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
RW+SS ++R AALWGNGDYGRLGLGSLESRW P VC F + +LACG
Sbjct: 13 RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GAHTLFLT+ G V+ATGLNDFGQLGI ++ + LEP+ ISG + VV++S G HHS A+T
Sbjct: 73 GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG+L++WG+NS GQLGLGK A KV+ PTKV+CL+ + K ALG E S+AVT G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
SWGA GSGRLGHG++SSILGF +++EYTPRLIK +G+K+K AAG LHSACID
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACID 247
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLG G S R + P + +A G H+ + +NGRV+
Sbjct: 33 WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86
Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
G ++ + H P IS EV G +H+C +T+ G+L+ WG N G
Sbjct: 87 ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146
Query: 319 CLGIG 323
LG+G
Sbjct: 147 QLGLG 151
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 26/189 (13%)
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA-------LGFEQSVAVTGGGKV 198
+WG G+LGLG ++ P + F +AA G ++ +T G+V
Sbjct: 32 LWGNGDYGRLGLGSLESRWSPT------VCPFFLARAADPPASLACGGAHTLFLTQNGRV 85
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+ G G+LG G + + S + R+++ +AG HS + +G+
Sbjct: 86 FATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVE---------VSAGNHHSCAVTADGK 136
Query: 259 VYIFGDRAVDKMLFQEG--NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
++++G + ++ +G P+ + L + V G H+ +T GE+ +WG+
Sbjct: 137 LFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGA 196
Query: 315 NENGCLGIG 323
+G LG G
Sbjct: 197 AGSGRLGHG 205
>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
Length = 413
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/293 (46%), Positives = 188/293 (64%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+S +R+ ALWGNGD GRLGL S++ PV+C A E H +++CGGAHTL LT+ G
Sbjct: 21 VSGKAGKRWVALWGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKG 80
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
V+ATGLN GQLG+ S +P+ + G V I+ G +HS+AIT GE Y+WG+N
Sbjct: 81 RVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYVWGRN 140
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
S GQLGLGK+A V P K+E L+G+ K ALG + S+ + G+VLSWG G LG
Sbjct: 141 SEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLG 200
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG+ + F + T+EYTPR+I LE ++V+ +AG +HSAC D++G +Y FG ++ ++
Sbjct: 201 HGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQL 260
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N A +P I LP + CGGYHT +T G++YTWGSNE+GCLG G
Sbjct: 261 GLGNNNDASQPCPIPDLPRVSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSG 313
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 18/225 (8%)
Query: 43 WGNGDYGRLGLGSLE---------SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG +G LG G + + + P + EK +++++ G H+ ++G +Y
Sbjct: 191 WGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACADDSGTIY 250
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
+ G QLG+ N S +P I L + V IS G +H+ AIT DG++Y WG N +G
Sbjct: 251 SFGQGSMCQLGLGNNNDAS-QPCPIPDLPR-VSSISCGGYHTGAITQDGDIYTWGSNEHG 308
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS-GRLGHG 212
LG G +A+ P ++E L+ F + + G++ + A++ G + SWG GGS G
Sbjct: 309 CLGSGFRASSK---PLRLESLAEAFMSEISCGWKHTAAIS-DGYIFSWGWGGSYGTYATQ 364
Query: 213 QESS--ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
ESS LG + P I+ + + + GF H+A I E
Sbjct: 365 AESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILE 409
>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
Length = 413
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/309 (45%), Positives = 193/309 (62%), Gaps = 11/309 (3%)
Query: 15 KQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK 74
K ++L K G KRW+ ALWGNGD GRLGL S++ PV+C A E H
Sbjct: 16 KNKVELSGKAG--KRWV---------ALWGNGDQGRLGLSESGSQFEPVLCRALESHEPC 64
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
+++CGGAHTL LT+ G V+ATGLN GQLG+ S +P+ + G V I+ G +H
Sbjct: 65 SVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVHIAAGRYH 124
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S+AIT GE Y+WG+NS GQLGLGK+A V P K+E L+G+ K ALG + S+ +
Sbjct: 125 SAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAE 184
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+VLSWG G LGHG+ + F + T+EYTPR+I LE ++++ +AG +HSAC D
Sbjct: 185 TGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACAD 244
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
++G +Y FG ++ ++ N A +P I LP + CGGYHT +T G++YTWGS
Sbjct: 245 DSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSSISCGGYHTGAITQDGDIYTWGS 304
Query: 315 NENGCLGIG 323
NE+GCLG G
Sbjct: 305 NEHGCLGSG 313
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 18/225 (8%)
Query: 43 WGNGDYGRLGLGSLE---------SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG +G LG G + + + P + EK +++++ G H+ ++G +Y
Sbjct: 191 WGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACADDSGTIY 250
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
+ G QLG+ N S +P I L + V IS G +H+ AIT DG++Y WG N +G
Sbjct: 251 SFGQGSMCQLGLGNNNDAS-QPCPIPDLPR-VSSISCGGYHTGAITQDGDIYTWGSNEHG 308
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS-GRLGHG 212
LG G +A+ P ++E L+ F + + G++ + A++ G + SWG GGS G
Sbjct: 309 CLGSGFRASSK---PLRLESLAEAFMSEISCGWKHTAAIS-DGYIFSWGWGGSYGTYATQ 364
Query: 213 QESS--ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
ESS LG + P I+ + + + GF H+A I E
Sbjct: 365 AESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILE 409
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/293 (48%), Positives = 182/293 (62%), Gaps = 5/293 (1%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
+ R+ ALWGNGDYGRLG S ES W P VC + + ALACGGAHTL LTE G VYA+
Sbjct: 7 KHRWVALWGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYAS 66
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNG 153
GLND+GQLG+ + G+S+E L + GL E I+ G HS+AI+ DG +YMWG+N+ G
Sbjct: 67 GLNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQG 126
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLGLGK+ + VE L + ALG E S+A++ G+VLSWG +GRLGHG+
Sbjct: 127 QLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGE 186
Query: 214 ---ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
SS+ R +SEYTPRL+K VKV AAG HSAC+DE G ++ FG ++
Sbjct: 187 GHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQL 246
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +P EE+ CGGYHT ++ G+LY WGSNE GCLG G
Sbjct: 247 GLGGDRDISEPKRVPVIPPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFG 299
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 106/239 (44%), Gaps = 37/239 (15%)
Query: 43 WGNGDYGRLGLGS------------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
WG GRLG G S + P + F + +A G H+ L E G
Sbjct: 174 WGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQG 233
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
++ G QLG+ + S EP R+ + V +I+ G +H+ AI+ +G+LYMWG N
Sbjct: 234 SLFTFGKGRECQLGLGGDRDIS-EPKRVP-VIPPVEEIACGGYHTGAISRNGQLYMWGSN 291
Query: 151 SNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS--- 206
G LG G K +P VE L + Q G++ ++A+T G V +WG GGS
Sbjct: 292 EYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGWGGSQGT 351
Query: 207 ---------GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
G+LG G E+ L E T K ++ +++ + GF HS I E
Sbjct: 352 HGVDGLSSGGQLGLGNENDFL-------EPTQVKSKNMKAIQI---SCGFNHSGAILEE 400
>gi|77551420|gb|ABA94217.1| uvb-resistance protein uvr8, possible, putative, expressed [Oryza
sativa Japonica Group]
Length = 362
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 166/322 (51%), Gaps = 93/322 (28%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
+RR AALWGNGDYGRLG+G+LESRW P C F + +LACGGAHT
Sbjct: 30 RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHT---- 85
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
S EP+ +SG ++VV++S G HHS A+T
Sbjct: 86 ----------------------SSSPEPIEVSGFDEKVVEVSAGNHHSCAVT-------- 115
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
A KV+ P KV+CL+ K ALG E S+A T G+VLSWGA G+G
Sbjct: 116 ------------GAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 163
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG ++SILGF +TSEYTPRLIK L+GVK+K AAG LHSACIDE G ++IFG +
Sbjct: 164 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 222
Query: 268 DKMLFQEGNHARRPSLIS------------------------------------KLPYSE 291
+K+ F RP+++ K P S
Sbjct: 223 EKVGFGRSGDELRPTVVEELYQCLSKLRMFAYIKFLTSGTDMVRSPEVLKSSLFKFPVS- 281
Query: 292 EVVCGGYHTCVLTSGGELYTWG 313
+V CG HT V+ SGG++YTWG
Sbjct: 282 KVSCGWKHTAVI-SGGDIYTWG 302
>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 418
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 31 ISSTLQRRFAAL-WGNGDYGRLGLGSLESR---WRPVVCSAFE------KHSLKALACGG 80
+ + +R + AL GNGD+GRLG GS + W P + F ++A+A GG
Sbjct: 17 VLTQYRREYIALSAGNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLDVRAVAAGG 76
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
AH++FL G V+ GLN GQLG S + +S EP+ + L EVV ++ G H+ + V
Sbjct: 77 AHSVFLVAGGHVFTCGLNADGQLGHSAGLPFSPEPMLVR-LDVEVVSVAAGNGHTLCVDV 135
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVL 199
DG ++ +GKN+ GQLG G IP K+ L+ Q A G E S+AV G+V
Sbjct: 136 DGCVWAFGKNTAGQLGTGNVDGT---IPRKIGALAKEARVAQVACGAEHSLAVADDGRVY 192
Query: 200 SWGAGGSGRLGHGQESSILGFLRST--SEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
SWG+ G LGHG E+ G+ T +E PRL++ LE KV AAG +HSACID+ G
Sbjct: 193 SWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRG 252
Query: 258 RVYIFGDRAVDKMLF--QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+Y +G +++ + +H PS + L + E+ CGG H+ T+ G + +WG+N
Sbjct: 253 NLYTWGQGRFNQLGLSAKPSDHETTPSPVMSLRFVHEIACGGLHSLANTNAG-VVSWGAN 311
Query: 316 ENGCLGIG 323
++G LG G
Sbjct: 312 QHGELGHG 319
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 43 WGNGDYGRLGLGS-----------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
WG+ G LG GS + P + + E + A+A G H+ + + G
Sbjct: 194 WGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRGN 253
Query: 92 VYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y G F QLG+S + P + L+ V +I+ G HS A T G + WG N
Sbjct: 254 LYTWGQGRFNQLGLSAKPSDHETTPSPVMSLRF-VHEIACGGLHSLANTNAG-VVSWGAN 311
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+G+LG G + +P ++ S ++K AA G++ S + G K+ +WG GGS
Sbjct: 312 QHGELGHGHHSDIKSAVPKPIKMGSRGWSKLAA-GWKHSAGIANG-KLFAWGFGGS 365
>gi|384247688|gb|EIE21174.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 367
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 158/292 (54%), Gaps = 8/292 (2%)
Query: 35 LQRRF---AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
+ RR A WGNGDYGRLG +S P + A ++ACGGAHT + G
Sbjct: 1 MARRLIGKVACWGNGDYGRLGHDCAKSLAVPSLVPALINQKFLSVACGGAHTAAVAVDGS 60
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND GQLG + +S++ + L + VQ++ G+ H+ +T ++ G N
Sbjct: 61 VFTWGLNDHGQLGHYTHQEFSMQEPQEVFLPEAAVQVAMGHSHTLFLTESSSVWAVGSNM 120
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+GQLGL ++ + +P +V+ L G A G + S+AV+ G++ +WG G LGH
Sbjct: 121 HGQLGLRRRGGQEW-VPRRVQDLVGTKIIGIAAGAQHSLAVSADGELFTWGGDTRGCLGH 179
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G+ S F + E PRL+K+L+G+ V+ AA G ++S C+D NG Y +G L
Sbjct: 180 GRSS----FAATQDESAPRLVKKLKGIMVQSAAGGLMNSGCVDANGAAYFWGPYLRQSPL 235
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ A P ++S + +++ GG H LT GG + T+G++E G LG+G
Sbjct: 236 TKAATEANEPEVLSGVQNVKQLALGGRHLVALTHGGRVATYGTSEYGLLGLG 287
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 86 LTETGCVYATGLNDF-----GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
L +GCV A G F Q +++ + EP +SG++ V Q++ G H A+T
Sbjct: 211 LMNSGCVDANGAAYFWGPYLRQSPLTKAATEANEPEVLSGVQN-VKQLALGGRHLVALTH 269
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G + +G + G LGLG P P + + + +Q A G++ S VT G++L+
Sbjct: 270 GGRVATYGTSEYGLLGLGSSDP---PSPFQPTLIPDVSLEQVAAGWQHSAGVTSDGQLLT 326
Query: 201 WGAGGS---------------GRLGHGQE 214
WG GGS G+LGH E
Sbjct: 327 WGWGGSVGSESGLFPDQTSAGGQLGHDNE 355
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 157/290 (54%), Gaps = 7/290 (2%)
Query: 37 RRFAALWGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
RR A +GNGD GRLG SLE S P V A LKA+ACGGAHT + ++G VY
Sbjct: 2 RRVLATFGNGDCGRLGH-SLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYT 60
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GLND GQLG P ++ + + VV +S GY+H+ + G ++ +G N GQ
Sbjct: 61 WGLNDKGQLGHDSEDSEVGLPGEVA-MPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQ 119
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LGLGK ++ P V+ L A G E S+A+T GG+V SWG +GRLGHG
Sbjct: 120 LGLGKDVV-LVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSA 178
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ F S+ E+ PRL++ E ++V+ +AG +HSA + G +++G ++ F
Sbjct: 179 TPRRLF-GSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGS 237
Query: 275 GNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+++ L S V CG H+ L GG + WG+N+NG LG G
Sbjct: 238 DEDLAGPTVLPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQG 287
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 104/229 (45%), Gaps = 23/229 (10%)
Query: 43 WGNGDYGRLGLGSLESR--------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WGN GRLG GS R + P + AFE ++ ++ G H+ ++ G +
Sbjct: 165 WGNAANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFL 224
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G F QLG + + P + LK ++ G HS A+ G + WG N NG
Sbjct: 225 WGYGKFHQLGFGSDEDLA-GPTVLPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGV 283
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS-------- 206
LG G + + P+KV G+ +Q A G++ S AVTG GK+ +WG GGS
Sbjct: 284 LGQGHEKQQQPKRPSKV---PGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFE 340
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GR G G + LG ++P + L + + A G H+A I E
Sbjct: 341 GRTGTGGQ---LGHGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIVE 386
>gi|294463585|gb|ADE77321.1| unknown [Picea sitchensis]
Length = 243
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 104/141 (73%)
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
ALG E S+A+T GKVLSWG G +GRLGHG +SS+ FL +SE+TP+LIK LEG+KV
Sbjct: 3 ALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVCK 62
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
AAG LHS+CIDENG V+ FG + ++ + PS++ LP+ ++V CGGYHTC
Sbjct: 63 IAAGLLHSSCIDENGTVFTFGQGRMYQLGLGHMKDSSVPSIVKDLPFVQQVACGGYHTCA 122
Query: 303 LTSGGELYTWGSNENGCLGIG 323
++S G+LYTWGS+ENGCLG+G
Sbjct: 123 ISSSGDLYTWGSSENGCLGLG 143
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 104/226 (46%), Gaps = 18/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWR---------PVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG G+ GRLG G S ++ P + E + +A G H+ + E G V+
Sbjct: 21 WGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVCKIAAGLLHSSCIDENGTVF 80
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G QLG+ S+ P + L V Q++ G +H+ AI+ G+LY WG + NG
Sbjct: 81 TFGQGRMYQLGLGHMKDSSV-PSIVKDLPF-VQQVACGGYHTCAISSSGDLYTWGSSENG 138
Query: 154 QLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS-GRLGH 211
LGLG K+ + P P +VE L + + + G++ + AV GG V +WG GGS G
Sbjct: 139 CLGLGSKS--LAPSPERVEGSLLPLHVSEVSCGWKHT-AVISGGNVFTWGWGGSNGTFSD 195
Query: 212 GQESS--ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
SS LG P ++ + + GF H+A I E
Sbjct: 196 DGFSSGGQLGLGNDFDYLEPSRVQFDRNFQALQISCGFNHTAAIFE 241
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 26/199 (13%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG----------ISENIGYSLEPLR-ISGLKKE 124
+A G H+L LTE G V + GL + G+LG + ++ ++ + ++ + G+K
Sbjct: 2 IALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIK-- 59
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V +I+ G HSS I +G ++ +G+ QLGLG K +P+ V+ L F +Q A
Sbjct: 60 VCKIAAGLLHSSCIDENGTVFTFGQGRMYQLGLGH--MKDSSVPSIVKDLP--FVQQVAC 115
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + A++ G + +WG+ +G LG G +S + R+ L + V +
Sbjct: 116 GGYHTCAISSSGDLYTWGSSENGCLGLGS--------KSLAPSPERVEGSLLPLHVSEVS 167
Query: 245 AGFLHSACIDENGRVYIFG 263
G+ H+A I G V+ +G
Sbjct: 168 CGWKHTAVI-SGGNVFTWG 185
>gi|357464831|ref|XP_003602697.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
truncatula]
gi|355491745|gb|AES72948.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
truncatula]
Length = 244
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 92/109 (84%)
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S I+ FL+S SEY+PRLIK+LEG+KVK AAG L SAC DENG V+IFGD+ +DK+L +
Sbjct: 36 SIIMYFLKSCSEYSPRLIKDLEGIKVKYVAAGMLTSACTDENGSVFIFGDKGIDKLLLKG 95
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ +PSLIS+LPY+EEV CGGYHTCVLT+ GELYTWGSNENGCLGIG
Sbjct: 96 TSNTTKPSLISELPYAEEVACGGYHTCVLTNFGELYTWGSNENGCLGIG 144
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 33/214 (15%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
S + P + E +K +A G + E G V+ G +L + + + +P
Sbjct: 46 SEYSPRLIKDLEGIKVKYVAAGMLTSACTDENGSVFIFGDKGIDKL-LLKGTSNTTKPSL 104
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
IS L +++ G +H+ +T GELY WG N NG LG+G A I +P KV+ G
Sbjct: 105 ISELPY-AEEVACGGYHTCVLTNFGELYTWGSNENGCLGIGSSYA--IHLPEKVQ---GP 158
Query: 178 FTK----QAALGFEQSVAVTGGGKVLSWGAGGS------------GRLGHGQESSILGFL 221
F + Q + G++ + A++ GG++ +WG GGS G+LGHG + +
Sbjct: 159 FLESSVVQVSCGWKHTAAIS-GGRIFTWGWGGSNGTFSDDGHSSGGQLGHGSDVDYI--- 214
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
P + E VK + GF H+ I E
Sbjct: 215 ------NPSRVCFAEDVKALQVSCGFNHTGAIFE 242
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 158/289 (54%), Gaps = 24/289 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG ++ P++ A + ++CG HT+ LT+ G VY G D G+
Sbjct: 6 WGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGR 65
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ K+V Q++ G +H++A+TV GELY WG G+LG G +
Sbjct: 66 LGHGDN-GWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNEN 124
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ VE + G++ +Q A G +V + V +WG +G GHG S
Sbjct: 125 GH--STPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSG----- 177
Query: 222 RSTSEYTPRLIKELEGVKVK-IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y+P + EL + +K I+A GF H+A + ENG+V+ FG+ ++ G+++ R
Sbjct: 178 ---HQYSPYCVSELVEINIKQISACGF-HTAALSENGQVFTFGEGKFGRL----GHNSER 229
Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++K + ++V CGG+HT +T G ++TWG E+G LG G
Sbjct: 230 NQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHG 278
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 14/282 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG G ++ P + ++ + CG HT +T +G +Y G +G+
Sbjct: 58 WGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGK 117
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G+S L S V Q++ G H+ + + ++Y WG NG G G +
Sbjct: 118 LGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSG 177
Query: 163 KVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P V L I KQ +A GF + A++ G+V ++G G GRLGH E
Sbjct: 178 HQYS-PYCVSELVEINIKQISACGF-HTAALSENGQVFTFGEGKFGRLGHNSER------ 229
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
++ + I L G ++K A G H+A + E+G V+ +G ++ + + P
Sbjct: 230 ---NQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIP 286
Query: 282 SLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + L ++ CG HT LT GE++TWG+ ++G LG
Sbjct: 287 TRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLG 328
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 91/182 (50%), Gaps = 13/182 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG+ +GQLGLG + + PI VE L T Q + G +V +T GKV +WG
Sbjct: 3 VYTWGRGEDGQLGLGDTSDQYHPIL--VEALQDRQTVQISCGSGHTVVLTDDGKVYTWGR 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG ++ PRL+++L KV+ G H+A + +G +Y +G
Sbjct: 61 GDDGRLGHGDNG---------WKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWG 111
Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ N PSL+ + Y +V CG HT VL ++YTWG ENG G
Sbjct: 112 GGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSG 171
Query: 322 IG 323
G
Sbjct: 172 HG 173
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
L+ + WG+ + G G G ++ P S + ++K ++ G HT L+E G V+
Sbjct: 154 LENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVF 213
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G FG+LG + + + + K + Q++ G H++A+T G ++ WG +G
Sbjct: 214 TFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHG 273
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG G K ++IP T+VE L Q G+ +VA+T G+V +WG G G+LGH
Sbjct: 274 QLGHGDKVNQIIP--TRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHND 331
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ + P+LI+ +V A+ H+ +
Sbjct: 332 TNKVT---------EPKLIETFNSKRVISVASYNEHTVAL 362
>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 419
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 163/303 (53%), Gaps = 16/303 (5%)
Query: 34 TLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--------ACGGAHTL 84
+ R F AL GNGD+GRLG G + + S+ H ++ L A GGAH++
Sbjct: 20 STSRAFTALSAGNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSI 79
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
FL G V+A GLN++GQLG ++ + E + L EVV+++ G +H+ + VDG +
Sbjct: 80 FLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVD-LDVEVVRVAAGNNHTLCVDVDGGV 138
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ +GKN GQLG G P + L G A+ G E S+A++ +V SWG
Sbjct: 139 WAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVAS-GAEHSLALSEDARVYSWGTS 197
Query: 205 GSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G LGHG E+ G+ T++ PRL++ L KV+ AAG +HSAC+DE G ++ +
Sbjct: 198 ADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDERGELFTW 257
Query: 263 GDRAVDKM--LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
G +++ + +H P + L + +V CGG HT TS G + +WG+N++G L
Sbjct: 258 GQGRFNQLGQTSKYVDHETAPKSVDTLRFVHQVTCGGLHTLASTSAG-VVSWGANQHGEL 316
Query: 321 GIG 323
G G
Sbjct: 317 GHG 319
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 22/199 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISE---NIGY-------SLEPLRISGLKK-E 124
+A G H+L L+E VY+ G + G LG N G+ +P + L + +
Sbjct: 175 VASGAEHSLALSEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETK 234
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V I+ G+ HS+ + GEL+ WG+ QLG K P V+ L F Q
Sbjct: 235 VRSIAAGHMHSACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTLR--FVHQVTC 292
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++A T G V+SWGA G LGHG S P+ IK L +
Sbjct: 293 GGLHTLASTSAG-VVSWGANQHGELGHGSNS-------DAKSAIPKPIK-LSSRGWSKLS 343
Query: 245 AGFLHSACIDENGRVYIFG 263
AG+ HSA + +G+++ +G
Sbjct: 344 AGWKHSAGVSNDGKLFAWG 362
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG-ISENIGYSLEPLRIS 119
+P + A + ++++A G H+ + E G ++ G F QLG S+ + + P +
Sbjct: 223 KPRLLRALSETKVRSIAAGHMHSACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVD 282
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L+ V Q++ G H+ A T G + WG N +G+LG G + IP ++ S ++
Sbjct: 283 TLRF-VHQVTCGGLHTLASTSAG-VVSWGANQHGELGHGSNSDAKSAIPKPIKLSSRGWS 340
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGS 206
K +A G++ S V+ GK+ +WG GGS
Sbjct: 341 KLSA-GWKHSAGVSNDGKLFAWGFGGS 366
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 14/131 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G + +LG S S + + CGG HTL T G V + G N G+
Sbjct: 257 WGQGRFNQLGQTSKYVDHETAPKSVDTLRFVHQVTCGGLHTLASTSAGVV-SWGANQHGE 315
Query: 103 LGISEN-IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG------------K 149
LG N S P I + ++S G+ HS+ ++ DG+L+ WG
Sbjct: 316 LGHGSNSDAKSAIPKPIKLSSRGWSKLSAGWKHSAGVSNDGKLFAWGFGGSVGSHSDEKL 375
Query: 150 NSNGQLGLGKK 160
+S GQLGLG
Sbjct: 376 SSGGQLGLGND 386
>gi|255085030|ref|XP_002504946.1| predicted protein [Micromonas sp. RCC299]
gi|226520215|gb|ACO66204.1| predicted protein [Micromonas sp. RCC299]
Length = 526
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 159/306 (51%), Gaps = 28/306 (9%)
Query: 44 GNGDYGRLGLGSLESRWRP---VVCSAFEKHS-------LKALACGGAHTLFLTETGCVY 93
GNGD+GRLG G + R R + F++ + + + + GG+HT +T G VY
Sbjct: 121 GNGDFGRLGHGG-DGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTADGAVY 179
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNS 151
GLN+ GQLG S + GY +SGL + VV +S G+HH+ +T GEL+ WG+N
Sbjct: 180 TCGLNEHGQLGHSHDAGYVPILRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWAWGRND 239
Query: 152 NGQLGLGKKAAKVIPIPTKVECLS-------GIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Q GLG A V+P+P + S G AA G ++AVT G V +WG G
Sbjct: 240 ASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAA-GPRHNLAVTDRGAVYTWGDG 298
Query: 205 GSGRLGHG-QESSILGFL-RSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVY 260
G LGHG ES GF R T+E PRL++ L +G++V AAAG HS C+D G V+
Sbjct: 299 KEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVH 358
Query: 261 IFGDRAVDKMLFQEGNHA---RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+G +++ N P+ + L ++ GG + + G + +WG+N N
Sbjct: 359 AWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRVRDLAAGGNFNVAVGADGSMISWGANGN 418
Query: 318 GCLGIG 323
G LG+G
Sbjct: 419 GELGLG 424
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 21/232 (9%)
Query: 43 WGNGDYGRLGLGSLES-RW------------RPVVCSAFEKHSLKALACGGAHTLFLTET 89
WG+G G LG G+ ES RW R V A + + + A G H++ + T
Sbjct: 295 WGDGKEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRT 354
Query: 90 GCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
G V+A G F QLG+ ++ EP R+ L + V ++ G + + A+ DG + W
Sbjct: 355 GHVHAWGQGRFNQLGVGAKNAPAFTTEPTRVPALGR-VRDLAAGGNFNVAVGADGSMISW 413
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS- 206
G N NG+LGLG K +P V + A+ G+ + A + G++ +WG GS
Sbjct: 414 GANGNGELGLGNSNDKRGDVPRLVHNPNAASFASASAGWRHAAATSSDGRLWTWGWSGSV 473
Query: 207 GRLGHGQESS--ILGFLRSTSEY-TPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+ G +S+ LG S++ P L+ L G K K + GF H+ + E
Sbjct: 474 GQHGVDADSTGGQLGLRNGQSDFWEPTLVVGLPG-KAKAVSCGFNHTVAVLE 524
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 125/299 (41%), Gaps = 49/299 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC-------SAFEKH-SLKALACGGAHTLFLTETGCVYA 94
WG D + GLGS P+ A H ++ ++A G H L +T+ G VY
Sbjct: 235 WGRNDASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYT 294
Query: 95 TGLNDFGQLGISENIGY--------SLEP-------LRISGLKKEVVQISTGYHHSSAIT 139
G G LG + + + EP L G+ EV + G HS +
Sbjct: 295 WGDGKEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGI--EVASAAAGLCHSVCVD 352
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
G ++ WG+ QLG+G K A PT+V L + + A G +VAV G +
Sbjct: 353 RTGHVHAWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRV--RDLAAGGNFNVAVGADGSM 410
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+SWGA G+G LG G + G + PRL+ A+AG+ H+A +GR
Sbjct: 411 ISWGANGNGELGLGNSNDKRGDV-------PRLVHNPNAASFASASAGWRHAAATSSDGR 463
Query: 259 VYIFG------------DRAVDKMLFQEGNHA-RRPSLISKLP-YSEEVVCGGYHTCVL 303
++ +G D ++ + G P+L+ LP ++ V CG HT +
Sbjct: 464 LWTWGWSGSVGQHGVDADSTGGQLGLRNGQSDFWEPTLVVGLPGKAKAVSCGFNHTVAV 522
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 114/278 (41%), Gaps = 36/278 (12%)
Query: 61 RPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI- 118
RPV S +H + A++ G HT+ +TE G ++A G ND Q G+ S+ PL
Sbjct: 202 RPV--SGLPQHDRVVAVSAGHHHTVCVTEGGELWAWGRNDASQCGLGSGA-PSVVPLPAW 258
Query: 119 --------SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-------- 162
G V+ ++ G H+ A+T G +Y WG G LG G +
Sbjct: 259 ISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYTWGDGKEGVLGHGADESWRWGFWGR 318
Query: 163 -KVIPIPTKVECLS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P P V L+ GI AA G SV V G V +WG G +LG G +++
Sbjct: 319 DTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVHAWGQGRFNQLGVGAKNAPA- 377
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T+E P + L +V+ AAG + + +G + +G ++ N R
Sbjct: 378 ---FTTE--PTRVPALG--RVRDLAAGGNFNVAVGADGSMISWGANGNGELGLGNSNDKR 430
Query: 280 --RPSLI--SKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
P L+ G H +S G L+TWG
Sbjct: 431 GDVPRLVHNPNAASFASASAGWRHAAATSSDGRLWTWG 468
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V+S G G GRLGHG + L ++E R+ +G+ V A+AG H+A + +
Sbjct: 116 RVVSCGNGDFGRLGHGGDGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTAD 175
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
G VY G L + P L +S LP + VV G +HT +T GGEL+
Sbjct: 176 GAVYTCGLNE-HGQLGHSHDAGYVPILRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWA 234
Query: 312 WGSNENGCLGIG 323
WG N+ G+G
Sbjct: 235 WGRNDASQCGLG 246
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 153/289 (52%), Gaps = 24/289 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + RPV A + + +ACG HT+ LT+ G VY G D G+
Sbjct: 6 WGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGR 65
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ K + Q++ G +H++A+TV G+LY WG G+LG G +
Sbjct: 66 LGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNET 124
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P VE L G+ +Q A G +V + V +WG +G GHG
Sbjct: 125 GHSTPF--LVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG----- 177
Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y P ++EL G V+I+A GF H+A + E G V+ FG+ ++ G+++ R
Sbjct: 178 ---HQYLPCPVEELRGKNIVQISACGF-HTAALSEFGEVFTFGEGKFGRL----GHNSER 229
Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+++ + ++V CGG+HT +T GE+YTWG E+G LG G
Sbjct: 230 NQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHG 278
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 14/266 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG G+ P + + ++ +ACG HT+ L E VY G + G
Sbjct: 110 WGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGV 169
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G + G+ P + L+ K +VQIS H++A++ GE++ +G+ G+LG +
Sbjct: 170 SGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLG--HNS 227
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ VE L+G KQ A G + AVT G+V +WG G G+LGHG +
Sbjct: 228 ERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK------- 280
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
++ P ++ L V G+ H+ + + G VY +G+ K+ + P
Sbjct: 281 --VNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLP 338
Query: 282 SLISKLPYSEEVVCGGY--HTCVLTS 305
L+ L + Y HT L
Sbjct: 339 KLVDVLEGKRVISVASYNEHTVALVD 364
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG+ +GQLGLG + + P+P ++ L+ Q A G +V +T G+V +WG
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG ++ PRL++EL G ++ G H+A + +G +Y +G
Sbjct: 61 GDDGRLGHGDNG---------WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111
Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ P L+ L +V CG HT VL ++YTWG ENG G
Sbjct: 112 GGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG 171
Query: 322 IG 323
G
Sbjct: 172 HG 173
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 152/289 (52%), Gaps = 24/289 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + RPV A + + +ACG HT+ LTE G VY G D G+
Sbjct: 6 WGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGR 65
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ K + Q++ G +H++A+TV G+LY WG G+LG G +
Sbjct: 66 LGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNET 124
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P VE L + +Q A G +V + V +WG +G GHG
Sbjct: 125 GH--STPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG----- 177
Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y P ++EL G V+I+A GF H+A + E G V+ FG+ ++ G+++ R
Sbjct: 178 ---HQYLPCPVEELRGKSIVQISACGF-HTAALSEFGEVFTFGEGKFGRL----GHNSER 229
Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+++ + ++V CGG+HT +T GE+YTWG E+G LG G
Sbjct: 230 NQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHG 278
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 144/292 (49%), Gaps = 34/292 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG G ++ P + +++ + CG HT +T +G +Y G +G+
Sbjct: 58 WGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGK 117
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-K 160
LG G+S P + LK +V Q++ G H+ + + ++Y WG NG G G +
Sbjct: 118 LGHGNETGHST-PYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTE 176
Query: 161 AAKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P P VE L G Q +A GF + A++ G+V ++G G GRLGH E
Sbjct: 177 GHQYLPCP--VEELRGKSIVQISACGF-HTAALSEFGEVFTFGEGKFGRLGHNSER---- 229
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF----------GDRAVDK 269
++ R + L G +VK A G H+A + E G VY + GD+ V+K
Sbjct: 230 -----NQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK-VNK 283
Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ R SL+ KL ++ CG HT LT GE+YTWG+ ++G LG
Sbjct: 284 TV-----PTRVESLLEKLVL--QITCGWSHTVTLTDTGEVYTWGNGDHGKLG 328
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG+ +GQLGLG + + P+P ++ L+ Q A G +V +T G+V +WG
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG ++ PRL++EL G ++ G H+A + +G +Y +G
Sbjct: 61 GDDGRLGHGDNG---------WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ P L+ L + +V CG HT VL ++YTWG ENG G
Sbjct: 112 GGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG 171
Query: 322 IG 323
G
Sbjct: 172 HG 173
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
L+ + WG+ + G G G E ++ P S+ ++ G HT L+E G V+
Sbjct: 154 LENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVF 213
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G FG+LG + + + K V Q++ G H++A+T GE+Y WG +G
Sbjct: 214 TFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHG 273
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG G K K +P T+VE L Q G+ +V +T G+V +WG G G+LGH
Sbjct: 274 QLGHGDKVNKTVP--TRVESLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHND 331
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ + P+ + L+G +V A+ H+ +
Sbjct: 332 TAKVT---------LPKPVDVLDGKRVISVASYNEHTVAL 362
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 156/285 (54%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG ++ P + SA S+K + CG HT +++TG ++ G +G+
Sbjct: 63 WGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK 122
Query: 103 LGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +G+ P R+ + +EV QI+ G H++A+ GE+Y WG NG G+G +A
Sbjct: 123 LGHGNEVGHP-APCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIG-EA 180
Query: 162 AKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ +P K+E L G+ T+ AA GF + A+T G + SWG G GRLG G E
Sbjct: 181 AEHQYLPKKLEALKGVKITQIAACGF-HTAAITQDGALWSWGEGKFGRLGQGNEK----- 234
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
++ TP ++ L+GV+VK A G HSAC+ E+G V FG ++ + +
Sbjct: 235 ----NQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTV 290
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L+ L + +V CG HT L+ G+++T+G+ ++G LG G
Sbjct: 291 PCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHG 335
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 121/246 (49%), Gaps = 12/246 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG G+ P AF ++ +ACG HT L G VY G + G
Sbjct: 115 WGGGMYGKLGHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGV 174
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
GI E + P ++ LK ++ QI+ H++AIT DG L+ WG+ G+LG G +
Sbjct: 175 CGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEK 234
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+V P VE L G+ KQ A G S VT G VL++G G G+LGHG +
Sbjct: 235 NQVTPCC--VEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDK------- 285
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P L+K LEG + G+ H+ + E+G+V+ FG+ K+ + P
Sbjct: 286 --TNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALP 343
Query: 282 SLISKL 287
L+ L
Sbjct: 344 KLVESL 349
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 87/187 (46%), Gaps = 17/187 (9%)
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
D LY WG+ +GQ G G + +P+P VE L + Q A G +V +T V S
Sbjct: 5 DSMLYSWGRGEDGQCGNGSTNDQEMPMP--VEGLKHLTVVQIACGSGHTVVLTEDKDVWS 62
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLGH + +Y P L+ L G +K G H+A I + G ++
Sbjct: 63 WGRGDDGRLGHAD---------NHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALW 113
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNE 316
+G K+ GN P+ + E++ CG HT L +GGE+Y WG E
Sbjct: 114 TWGGGMYGKL--GHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRE 171
Query: 317 NGCLGIG 323
NG GIG
Sbjct: 172 NGVCGIG 178
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G++G+LG G +R P + A E + + CG +HT+ L+E G V+ G D G+
Sbjct: 272 FGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGK 331
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
LG N +L L S +V ++++ H+ A+
Sbjct: 332 LGHGANAKSALPKLVESLANMKVAKVASYNEHTVAL 367
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 143/285 (50%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
WG G+ G+LG G E R P+V SA + + ++ CG HT +E T VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + + P I GLK E+ QI+ G H AIT DGE++ WG+N NGQLGLG
Sbjct: 98 RLGHGNSSDLFI-PRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGH- 155
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + +P KV GI K A G E + AVT GK+ WG G G LG G + L
Sbjct: 156 -TEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRL-- 212
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + + G K+ + A G+ H+ + +G +Y FG ++ +
Sbjct: 213 -------VPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLV 265
Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + L + V GG+ HT L GELY WG N+ G +G G
Sbjct: 266 PHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCG 310
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 19/291 (6%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
R WG GD+GRLG G+ + P + +K +ACG +H L +T G V++ G
Sbjct: 86 RTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGR 145
Query: 98 NDFGQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQ 154
N GQLG+ +E++ L P +++ + V+ ++ G H++A+T G+LY WG G
Sbjct: 146 NQNGQLGLGHTEDV---LVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGN 202
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LGLG + ++ +P +V + G A G+ ++AV G + ++G G+LGHG
Sbjct: 203 LGLGDRNDRL--VPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDF 260
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
L P ++ L+ ++ + G+ H+ +DE+G +Y +G ++
Sbjct: 261 EDHL---------VPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGN 311
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P LI+ + + V CG HT +T G +Y+WG +G LG G
Sbjct: 312 TDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHG 362
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 130/265 (49%), Gaps = 16/265 (6%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
CS + + +++ G +HT+ L V + G + GQLG + L PL IS L
Sbjct: 6 AACSGGPRRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL-PLVISALD 64
Query: 123 K-EVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
E+ I+ G H++A + +Y WG G+LG G + + IP ++ L G+ K
Sbjct: 65 DCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSD--LFIPRAIKGLKGLEIK 122
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q A G +A+TG G+V SWG +G+LG G +L P + EG+ V
Sbjct: 123 QIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVL---------VPNKVAAFEGIAV 173
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGY 298
K+ AAG H+A + E+G++Y +G + + N P ++ +P + V CG
Sbjct: 174 KMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWR 233
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
HT + + G LYT+G ++ G LG G
Sbjct: 234 HTIAVANSGNLYTFGWSKYGQLGHG 258
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + +++A++ G HT+ L E G +Y G N FGQ+G
Sbjct: 252 YGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGN 311
Query: 108 NIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
++ P I+G+ E V +++ G+ H+ AIT G +Y WG+ ++GQLG G +
Sbjct: 312 TDDHN-SPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRC-- 368
Query: 167 IPTKVECLS 175
+P ++E LS
Sbjct: 369 VPKRIELLS 377
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 143/280 (51%), Gaps = 14/280 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + RPV+ A + + +ACG HT+ L+E G VY G D G+
Sbjct: 12 WGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGR 71
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P + L+ + +VQ + G +H++A+T GELY WG G+LG G ++
Sbjct: 72 LGHGDN-GWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNES 130
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P K G Q A G +V +T GKV +WG +G +GH
Sbjct: 131 GHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADG----- 185
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y PR+++ L+ V ++AA GF H+A + G ++ +G+ ++ +
Sbjct: 186 ---HQYLPRMLESLQAKTVTQVAACGF-HTAALTAAGEIFTWGEGKFGRLGHGMERNQMV 241
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
P ++ L V CGG+H+ + GELYTWG E+G
Sbjct: 242 PRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHG 281
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 122/240 (50%), Gaps = 18/240 (7%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
G VY+ G + GQLG+ + P+ + LK K VVQ++ G H+ ++ DG +Y WG
Sbjct: 7 GLVYSWGRGEDGQLGLGDTNDQD-RPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWG 65
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+ +G+LG G K +P VE L G QA G + AVT G++ +WG G G+
Sbjct: 66 RGDDGRLGHGDNGWKYVP--RIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
LGHG ES TP ++K L EG +V A G H+ + + G+VY +GD+
Sbjct: 124 LGHGNESG---------HPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKE 174
Query: 267 VDKMLFQEGN-HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + H P ++ L +V G+HT LT+ GE++TWG + G LG G
Sbjct: 175 NGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHG 234
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
V G +Y WG+ +GQLGLG + P+ V+ L Q A G +V ++ G V
Sbjct: 5 VAGLVYSWGRGEDGQLGLGDTNDQDRPV--LVDALKSKGVVQVACGSGHTVVLSEDGAVY 62
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+WG G GRLGHG +Y PR+++ LEG ++ A G H+A + + G +
Sbjct: 63 TWGRGDDGRLGHGDNGW---------KYVPRIVEALEGQRIVQATCGSYHTAAVTDKGEL 113
Query: 260 YIFGDRAVDKMLFQEGNHARRPS------LISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
Y +G K+ GN + P+ L + ++ CG HT VLT G++YTWG
Sbjct: 114 YTWGGGMYGKL--GHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWG 171
Query: 314 SNENGCLG 321
ENG +G
Sbjct: 172 DKENGVVG 179
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G YG+LG G+ P + E + +ACG HT+ LT+ G VY G +
Sbjct: 116 WGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKEN 175
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G +G + G+ P + L+ K V Q++ H++A+T GE++ WG+ G+LG G
Sbjct: 176 GVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGM 235
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL---GHGQESS 216
+ +++P VE L G A G S A+ G++ +WG G G++ G+G
Sbjct: 236 ERNQMVP--RMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGK 293
Query: 217 I-LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ G +R S P L+ L + V A+ H+A +
Sbjct: 294 LGHGDVRKVS--VPTLVAGLVKMHVVKVASYNEHTAAL 329
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ + G +G + + ++ P + + + ++ +A G HT LT G ++ G FG
Sbjct: 170 WGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFG 229
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL------ 155
+LG + + + + K V ++ G HS+AI GELY WG +GQ+
Sbjct: 230 RLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNG 289
Query: 156 ---GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
LG + + +PT V L + + A E + A+ G
Sbjct: 290 DHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAG 331
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 147/283 (51%), Gaps = 16/283 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG + P A ++ +ACG HT+ LT G V+ G D G+
Sbjct: 5 WGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGR 64
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +N G+ P L ++V Q++ G +H++A+T +G+LY WG G+LG G +A
Sbjct: 65 LGHGDN-GWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEA 123
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P +VE L G Q A G + VT G + +WG +G GHG+
Sbjct: 124 GHA--TPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG----- 176
Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+Y PRL++ + +V +I+A GF H+A + + G ++ +G+ ++ +
Sbjct: 177 ---HQYLPRLLESMAAKRVAQISACGF-HTAIVTDAGELFTWGEGKFGRLGHMSERNCHS 232
Query: 281 PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P+++ + +V CGG+HT V++ G LYT+G E+G LG
Sbjct: 233 PTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLG 275
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 91/183 (49%), Gaps = 15/183 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG+ +GQLGLG + + PT V+ L G+ +Q A G +V +T G+V +WG
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQ--DEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG +Y PR+ + L G V G H+A + NG +Y +G
Sbjct: 60 GDDGRLGHGDNGW---------KYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWG 110
Query: 264 DRAVDKMLF-QEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
K+ E HA P + L ++ CG HT ++T+ G LYTWG ENG
Sbjct: 111 GGMYGKLGHGDEAGHAT-PKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVA 169
Query: 321 GIG 323
G G
Sbjct: 170 GHG 172
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 12/243 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG G P A ++ +ACG HT +T +G +Y G + G
Sbjct: 109 WGGGMYGKLGHGDEAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGV 168
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G E G+ P + + K V QIS H++ +T GEL+ WG+ G+LG +
Sbjct: 169 AGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLG--HMS 226
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ PT V+ + G +Q + G + V+ G++ ++G G G+LGH
Sbjct: 227 ERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDR------- 279
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
++ TP ++ L+G+ V G+ HS + G VY +G+ K+ G P
Sbjct: 280 --VNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVP 337
Query: 282 SLI 284
+
Sbjct: 338 QAV 340
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +GRLG S + P + + ++CGG HT ++E G +Y G + GQ
Sbjct: 214 WGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + + P + L V QI+ G+ HS A+TV G +Y WG +G+LG G
Sbjct: 274 LGHNDRVN-KMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGN-- 330
Query: 162 AKVIPIPTKVE 172
+ + +P VE
Sbjct: 331 GRKVAVPQAVE 341
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 148/286 (51%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT +E+ VY+ G DFG
Sbjct: 40 WGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFG 99
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + GL+ + QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 100 RLGHGNSSDLFTPQPIKALHGLR--IKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E + AVT G++ WG G G LG G + L
Sbjct: 158 TEDSL--VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL- 214
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P + +EGVK+ A G+ H+ + +G +Y +G ++ +
Sbjct: 215 --------VPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL 266
Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + E+ G HT LTS G+LY WG N+ G +G+G
Sbjct: 267 TPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 312
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 143/285 (50%), Gaps = 17/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A +K +ACG +H L +T G V + G N GQ
Sbjct: 93 WGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQ 152
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + V+ ++ G H++A+T DGELY WG G LGLG +
Sbjct: 153 LGLG-TTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRN 211
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV + G+ + A G+ +++V+ G + ++G G+LGHG L
Sbjct: 212 DRL--VPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL--- 266
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TP ++ L+ + + G+ H+ + +G++Y +G ++ + P
Sbjct: 267 ------TPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSP 320
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ K P+ ++VV CG HT +T +++WG NG LG G
Sbjct: 321 VQV-KFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHG 364
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P S E + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 197 WGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQ 256
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L++ ++ +IS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 257 LGHGDFEDH-LTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNV 315
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ K + + G+ ++AVT V SWG G +G+LGHG+
Sbjct: 316 DHCSPVQVKFPHEQKVV--HISCGWRHTLAVTERQNVFSWGRGTNGQLGHGE-------- 365
Query: 222 RSTSEYTPRLIKEL 235
S P++I+ L
Sbjct: 366 -SIDRNIPKMIEVL 378
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+S + V+ IS G HS A+ + WG+ +GQLG G ++ PT + L G
Sbjct: 10 EVSAPVRRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRL--SPTYLSALDG 67
Query: 177 IFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + + A + +V SWG G GRLGHG S + +TP+ IK L
Sbjct: 68 HEVVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDL---------FTPQPIKAL 118
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
G+++K A G H + +G V +G ++ + P I + V
Sbjct: 119 HGLRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMV 178
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT +T GELY WG G LG+G
Sbjct: 179 AAGAEHTAAVTEDGELYGWGWGRYGNLGLG 208
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A +++ + ++ G HT+ LT G +Y G N FGQ+G+ +
Sbjct: 254 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD 313
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ + P+++ +++VV IS G+ H+ A+T ++ WG+ +NGQLG G+ +
Sbjct: 314 NVDH-CSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDR--N 370
Query: 167 IPTKVECLS 175
IP +E LS
Sbjct: 371 IPKMIEVLS 379
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 140/285 (49%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
WG G+ G+LG G E R P + SA + + ++ CG HT L+ T VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I LK EV QI+ G H AIT DGE+ WG+N NGQLGLG
Sbjct: 98 RLGHG-NSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGH- 155
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P K+ G+ K A G E + AVT GK+ WG G G LG G L
Sbjct: 156 -TEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRL-- 212
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + + G +K+ A G+ H+ C+ E+G +Y FG ++ +
Sbjct: 213 -------VPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLI 265
Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + L + + + GG+ HT L S G LY WG N+ G +G G
Sbjct: 266 PHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCG 310
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 146/288 (50%), Gaps = 23/288 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V G N GQ
Sbjct: 91 WGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQ 150
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+ +E++ L P +++ + V+ ++ G H++A+T +G+LY WG G LGLG
Sbjct: 151 LGLGHTEDV---LTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGD 207
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ ++ +P +V ++G K A G+ ++ V G + ++G G+LGHG + L
Sbjct: 208 REDRL--VPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHL- 264
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P ++ L+ K++ G+ H+ +D +GR+Y +G ++
Sbjct: 265 --------IPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQS 316
Query: 280 RPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L+ L ++VV CG HT +T G +Y+WG +G LG G
Sbjct: 317 SPQLVKGL--QDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHG 362
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
G++++V+ +S G HS A+ + WG+ +GQLG G A+ PT V L
Sbjct: 11 GVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGD--AEERHFPTIVSALDDCEI 68
Query: 180 KQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
G + + A++ K V SWG G GRLGHG S + + P+ IK L+G+
Sbjct: 69 SSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDL---------FIPQPIKALKGL 119
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCG 296
+VK A G H I +G V +G ++ P ++ + + G
Sbjct: 120 EVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAG 179
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
HT +T G+LY WG G LG+G
Sbjct: 180 AEHTTAVTENGKLYGWGWGRYGNLGLG 206
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G P A + ++A+ G HT L G +Y G N FGQ+G
Sbjct: 252 YGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCG- 310
Query: 108 NIGYSLEPLRISGLKKEVVQI-STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N P + GL+ +VV + G+ H+ A+T G +Y WG+ ++GQLG G +
Sbjct: 311 NTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDR--S 368
Query: 167 IPTKVECLS 175
P ++E LS
Sbjct: 369 TPKRIEILS 377
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G G+ E + P + + + + CG HTL +T+ G VY+ G GQ
Sbjct: 299 WGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQ 358
Query: 103 LGISENIGYSLEPLRISGLKKE 124
LG + + S P RI L +
Sbjct: 359 LGHGDTVDRST-PKRIEILSSD 379
>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
Length = 3971
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 157/288 (54%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + + SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3238 GEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3297
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +E++Q++ G+ HS+ ++ DG+L+ +G G+LGLG
Sbjct: 3298 GKLGHG-NSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGN 3356
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
+ K IP +V L G Q G ++AV+ G V S+G G G+LG G
Sbjct: 3357 TSNKK--IPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGN----- 3409
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ TP+ + L G+ VK G S + ++GRV+ FG +R + + + NH
Sbjct: 3410 ----STAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIGQPESRSRNH 3465
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP + L + E+VV G H+ LTS GE++ WGSN +G LGIG
Sbjct: 3466 -NRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIG 3512
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 30/283 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + +ACG H+ ++ G ++ G D+G+
Sbjct: 3292 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGR 3351
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ N P R++ L+ ++V Q+ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 3352 LGLG-NTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNS 3410
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P +V+ L GI K+ G + SVA+T G+V ++ G RL ES
Sbjct: 3411 TAKS--TPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTF---GQERLIGQPES----- 3460
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
RS + P+ + LE V+ G HS + G V+ +G ++ + N R
Sbjct: 3461 -RSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARRE 3519
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L++ L WGSN +G LGIG
Sbjct: 3520 PCLVT----------------ALQGKNVRQVWGSNGDGQLGIG 3546
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 20/229 (8%)
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQL G SL ++ + QI G + + I +G + G+ S G+LG G
Sbjct: 3194 GQLA---ETGRSLLTPTVTPSFSQAQQIICGQNCTFVIQANGTVQACGEGSYGRLGQGN- 3249
Query: 161 AAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ + T + L G Q + G + S+A+T G+V SWG G G+LGHG
Sbjct: 3250 -SDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN---- 3304
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S + PR I+ L+G ++ A GF HSA + +G+++ FG+ ++ ++
Sbjct: 3305 -----SDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSN 3359
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIG 323
+ P ++ L +V CG HT +++ G ++++G + G LG+G
Sbjct: 3360 KKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLG 3408
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E YMWG +GQL + + + PT S +Q G + + G V + G
Sbjct: 3184 EAYMWGGGRHGQLA---ETGRSLLTPTVTPSFSQ--AQQIICGQNCTFVIQANGTVQACG 3238
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
G GRLG G + +I L+G V + + G HS + E+G V
Sbjct: 3239 EGSYGRLGQGNSDDLHQLT---------IISALQGFVVTQLVTSCGSDGHSMALTESGEV 3289
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +GD K+ + RRP I L E ++ CG H+ V+++ G+L+T+G+ +
Sbjct: 3290 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDY 3349
Query: 318 GCLGIG 323
G LG+G
Sbjct: 3350 GRLGLG 3355
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 54/119 (45%), Gaps = 24/119 (20%)
Query: 53 LGSLESRWR----PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
+G ESR R P A E ++ + G H+L LT TG V+A G N GQLGI +
Sbjct: 3455 IGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIG-D 3513
Query: 109 IGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
EP ++ L+ K V Q+ WG N +GQLG+G A+ P
Sbjct: 3514 TNARREPCLVTALQGKNVRQV------------------WGSNGDGQLGIGDTNARREP 3554
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 157/288 (54%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4033 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4092
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4093 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4151
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G+ Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4152 TSNK--KLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGN----- 4204
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4205 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4260
Query: 278 ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP L+ L + +++ G HT L++ GE+Y WGSN G LG+G
Sbjct: 4261 -NRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLG 4307
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4087 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4146
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ + Q++ G +H+ A++ DG L + +G G+LGLG
Sbjct: 4147 LGLGNTSNKKL-PERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNS 4205
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4206 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4255
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+L+ L G+ + A G H+ + +G VY +G + ++ NH R
Sbjct: 4256 -RARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVRE 4314
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4315 PTLVTAL 4321
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 146/289 (50%), Gaps = 25/289 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P I G K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G ++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG +
Sbjct: 546 GDSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++++ L+G+ + AG S + G+VY +G A E
Sbjct: 602 V---------YKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+FT++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 VVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPCFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + + + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++++WG +GQL +A + + IP+ S +Q G + + G VL+ G
Sbjct: 3979 DVFLWGAGRHGQLA---EAGRNVMIPSGAGSFSQ--AQQVICGQNCTFVIQANGTVLACG 4033
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
G GRLG G + + +I L+G V + + G HS + E+G V
Sbjct: 4034 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4084
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
+ +GD K+ + RRP I L EEVV CG H+ V+T+ G+L+T+G+ +
Sbjct: 4085 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4143
Query: 317 NGCLGIG 323
G LG+G
Sbjct: 4144 YGRLGLG 4150
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 140/285 (49%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 40 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 99
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 100 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 158
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 159 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 210
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 211 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 267
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ G HT LTS G+LY WG N+ G +G+G
Sbjct: 268 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 312
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 93 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 152
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 153 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 211
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 212 DRL--VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 266
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 267 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 318
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + + P ++VV CG HT +T ++ WG NG LGIG
Sbjct: 319 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 364
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 197 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 256
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 257 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 315
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 316 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 365
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ ID
Sbjct: 366 -SVDRNFPKII---EALSVDGASGQHIESSNID 394
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ ++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 10 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDG 67
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + +VA + G +V SWG G GRLGHG S + +TP IK L
Sbjct: 68 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 118
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
G+++K A G H + G V +G ++ + + P I + V
Sbjct: 119 HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMV 178
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT +T G+LY WG G LG+G
Sbjct: 179 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 208
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 140/285 (49%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 28 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 87
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 88 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 146
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 147 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 198
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 199 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ G HT LTS G+LY WG N+ G +G+G
Sbjct: 256 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 300
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 81 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 140
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 141 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 199
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 200 DRL--VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 254
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 255 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 306
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + + P ++VV CG HT +T ++ WG NG LGIG
Sbjct: 307 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 352
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 13/194 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 185 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 244
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 245 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 304 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 353
Query: 222 RSTSEYTPRLIKEL 235
S P++I+ L
Sbjct: 354 -SVDRNFPKIIEAL 366
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 4 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDGHQIVSV 61
Query: 183 ALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + +VA + G +V SWG G GRLGHG S + +TP IK L G+++K
Sbjct: 62 TCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALHGIRIK 112
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
A G H + G V +G ++ + + P I + V G H
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 172
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T +T G+LY WG G LG+G
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLG 196
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G+G+ + PV + + ++CG HTL +TE V+A G GQ
Sbjct: 289 WGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 348
Query: 103 LGISENIGYS----LEPLRISG 120
LGI E++ + +E L + G
Sbjct: 349 LGIGESVDRNFPKIIEALSVDG 370
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 140/285 (49%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ G HT LTS G+LY WG N+ G +G+G
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 311
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 152 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 211 DRL--VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 265
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 266 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 317
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + + P ++VV CG HT +T ++ WG NG LGIG
Sbjct: 318 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 256 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 315 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 364
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ ID
Sbjct: 365 -SVDRNFPKII---EALSVDGASGQHIESSNID 393
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ ++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 9 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDG 66
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + +VA + G +V SWG G GRLGHG S + +TP IK L
Sbjct: 67 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 117
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
G+++K A G H + G V +G ++ + + P I + V
Sbjct: 118 HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMV 177
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT +T G+LY WG G LG+G
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 140/285 (49%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 158 EDSL--VPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ G HT LTS G+LY WG N+ G +G+G
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 311
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 152 LGLGDTED-SLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 211 DRL--VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 265
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 266 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 317
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + + P ++VV CG HT +T ++ WG NG LGIG
Sbjct: 318 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 256 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 315 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 364
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ ID
Sbjct: 365 -SVDRNFPKII---EALSVDGASGQHIESSNID 393
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ ++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 9 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDG 66
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + +VA + G +V SWG G GRLGHG S + +TP IK L
Sbjct: 67 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 117
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEE 292
G+++K A G H + G V +G ++ + + P I +P +
Sbjct: 118 HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPI-KM 176
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V G HT +T G+LY WG G LG+G
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 140/285 (49%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 28 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 87
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 88 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 146
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 147 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 198
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 199 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ G HT LTS G+LY WG N+ G +G+G
Sbjct: 256 PHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVG 300
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 81 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 140
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 141 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 199
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 200 DRL--VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 254
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + GF H+ + +G++Y +G ++ GN+ +
Sbjct: 255 ------IPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 306
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + + P ++VV CG HT +T ++ WG NG LGIG
Sbjct: 307 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 352
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 13/194 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 185 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 244
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 245 LGHGD-LEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 304 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 353
Query: 222 RSTSEYTPRLIKEL 235
S P++I+ L
Sbjct: 354 -SVDRNFPKIIEAL 366
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 4 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDGHQIVSV 61
Query: 183 ALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + +VA + G +V SWG G GRLGHG S + +TP IK L G+++K
Sbjct: 62 TCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALHGIRIK 112
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
A G H + G V +G ++ + + P I + V G H
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEH 172
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T +T G+LY WG G LG+G
Sbjct: 173 TAAVTEDGDLYGWGWGRYGNLGLG 196
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G+G+ + PV + + ++CG HTL +TE V+A G GQ
Sbjct: 289 WGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 348
Query: 103 LGISENIGYS----LEPLRISG 120
LGI E++ + +E L + G
Sbjct: 349 LGIGESVDRNFPKIIEALSVDG 370
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
Length = 4860
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 154/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G +VAV T G V ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP + L + E++ G HT L+S G++Y WGSN G LG+G
Sbjct: 4279 -NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG 4325
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAKS--SPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISKL 287
P+LI+ L
Sbjct: 4333 PTLITVL 4339
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
+ P KV L G+ +Q + G S+A T +V++W L E S
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758
Query: 219 GFLRSTSEY 227
LRS E+
Sbjct: 759 SHLRSFLEH 767
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+T+ G+L+T+G+ + G LG+G
Sbjct: 4137 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 4168
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVSIQQISAGTSHS 730
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 157/288 (54%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4127 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4186
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4187 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4245
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P KV L G Q A G ++ V+ G ++ ++G G G+LG G
Sbjct: 4246 TSNK--KLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGN----- 4298
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G+V+ FG DR + + NH
Sbjct: 4299 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNH 4354
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP + L + ++V G HT VL+S G++YTWGSN G LG+G
Sbjct: 4355 -NRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLG 4401
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4181 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4240
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P +++ L+ V Q++ G +H+ ++ DG + + +G G+LGLG
Sbjct: 4241 LGLGNTSNKKL-PEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNS 4299
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T GKV ++G L G
Sbjct: 4300 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEG-------- 4349
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L G+ ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4350 -RARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVRE 4408
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4409 PTLVTTL 4415
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H ++K ++ HTL T G V++ G D
Sbjct: 435 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 493
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A++ DGELY WG+ G+LG G
Sbjct: 494 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 553
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IP T V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 554 DSNSRNIP--TLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 609
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 610 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 659
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 660 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 707
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 372 TPVVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLASSFADAQTIEAGQYCTFVISS 427
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 428 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 487
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 488 SWGDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGE 538
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
+Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N
Sbjct: 539 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 598
Query: 318 GCLGIG 323
G LG G
Sbjct: 599 GKLGHG 604
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 593 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 650
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L VV IS G H A++ D E+Y WG NS GQ G G
Sbjct: 651 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 710
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 711 GPITK-PKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 752
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++++WG +GQL +A + I +PT S +Q G + + G VL+ G
Sbjct: 4073 DVFLWGAGRHGQLA---EAGRNILVPTIAPSFSQ--AQQVVCGQNCTFVIQPNGTVLACG 4127
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
G GRLG G + + +I L+G V + + G HS + E+G V
Sbjct: 4128 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4178
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
+ +GD K+ + RRP I L EEVV CG H+ V+T+ G+L+T+G+ +
Sbjct: 4179 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4237
Query: 317 NGCLGIG 323
G LG+G
Sbjct: 4238 YGRLGLG 4244
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 542 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 599
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 600 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 656
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 657 EATAL-RPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 708
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 709 --STGPITKPKKVIGLDGVAIQQISAGTSHS 737
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 141/285 (49%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLGHG-NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G + L
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL-- 213
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 214 -------VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ G HT LTS G+LY WG N+ G +G+G
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 311
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 152 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 211 DRL--VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 265
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 266 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 317
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + + P ++VV CG HT +T ++ WG NG LGIG
Sbjct: 318 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 196 WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 256 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 315 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 364
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ ID
Sbjct: 365 -SVDRNFPKII---EALSVDGASGQHIESSNID 393
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ + V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 9 EVTAPPRTVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDG 66
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + +VA + G +V SWG G GRLGHG S + +TP IK L
Sbjct: 67 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 117
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
G+++K A G H + G V +G ++ + + P I + V
Sbjct: 118 HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMV 177
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT +T G+LY WG G LG+G
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P C F + + CG HT+FL + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P + L ++ V +S G H+ A+ G+++ WG S+GQLGL
Sbjct: 64 GQLGHEKP---RKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNN 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P ++CLS + Q A G+ S A++ GG+V SWG G+LG G S +
Sbjct: 121 -FEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TP++I+ L+G+ +AG HS I +G V+ +G ++ + N
Sbjct: 180 --------TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRW 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+ V+ CG HT LT G ++T+G+ G LG
Sbjct: 232 FPALLKSL-RSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S P + + + L+ GGAH+ +T +G V+ G N FG
Sbjct: 161 WGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L S + V+ +S G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLG 210
++ P KV L G Q + G + ++A T GK+ S+G GG+G+LG
Sbjct: 281 HEI--NPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 100 FGQLG---ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+GQLG I E I +EP + K+V + G H+ + DG +Y G N GQL
Sbjct: 9 YGQLGLGGIDEEI--VIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQL 66
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K K P V L + G ++A+ G++ SWG G G+LG
Sbjct: 67 GHEKPRKK----PEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFE 122
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQE 274
+ PR IK L V++ A G+ HS + + G+V+ +G ++ L
Sbjct: 123 ECVR--------VPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMH 174
Query: 275 GNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G+ P +I L P+++ + GG H+ +T G ++ WG N+ G LG+
Sbjct: 175 GSSISTPQIIQSLQGIPFAQ-LSAGGAHSFAITLSGAVFGWGRNKFGQLGLN 225
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL RW P + + + ++CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QIS G H+ A T G++Y +G NGQLG
Sbjct: 274 LG-HNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRST 332
Query: 161 AAKVIPIPTKVECLSGIFTKQAA 183
+ P P K G F AA
Sbjct: 333 CNRKSPAPVK-----GPFVASAA 350
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 18/182 (9%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K E G G + +V + G V + G
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGH + P + L+ + + G H+ +++ G+++ +G
Sbjct: 64 GQLGHEKPRK-----------KPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGS 112
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
D + F+E R P I L + +V CG H+ L+ GG++++WG N+ G LG
Sbjct: 113 DGQLGLNNFEEC--VRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLG 170
Query: 322 IG 323
+G
Sbjct: 171 LG 172
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 154/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4115 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4173
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G +VAV T G V ++G G G+LG G
Sbjct: 4174 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN----- 4226
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4227 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP + L + E++ G HT L+S G++Y WGSN G LG+G
Sbjct: 4283 -NRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG 4329
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 143/288 (49%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IP K I + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRNIPTLVK----DIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4109 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4168
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4169 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4228 TAKS--SPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4277
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4278 -RARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4336
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4337 PTLVTVL 4343
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLASSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 22/230 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
+LG ++ + I L K+++ ++S G H+ A++ DG ++ +G NG+LG
Sbjct: 542 RLGHGDSNSRN-----IPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 597 GD--TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSE 650
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 651 ATALR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
+ P KV L GI +Q + G S+A T +V++W L E S
Sbjct: 704 GPITK-PKKVGGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758
Query: 219 GFLRSTSEY 227
LRS E+
Sbjct: 759 SHLRSFLEH 767
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + IP S
Sbjct: 3976 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSP- 4031
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4032 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4081
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4082 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4140
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+T+ G+L+T+G+ + G LG+G
Sbjct: 4141 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 4172
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDI--INVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVGGLDGIAIQQISAGTSHS 730
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 144/297 (48%), Gaps = 40/297 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +E+ VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLGHG-NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G + L
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL-- 213
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV 267
P + G K+ + A G+ H+ + +G +Y +G D V
Sbjct: 214 -------VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLV 266
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
L GN S+IS+ + GG+ HT LTS G+LY WG N+ G +G+G
Sbjct: 267 PHKLEALGN-----SVISQ-------ISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 311
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 142/286 (49%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 152 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 211 DRL--VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 265
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 266 ------VPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 317
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + ++P ++VV CG HT +T ++ WG NG LGIG
Sbjct: 318 SPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 196 WGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L V+ QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 256 LGHGD-LEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ ++ + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 315 DQCSPVQVRIPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 364
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ D
Sbjct: 365 -SLDRNFPKII---EALSVDGASGQHIESSNFD 393
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ + V+ IS G HS A+ + WG+ +GQLG G ++ PT++ L
Sbjct: 9 EVTPPPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALDD 66
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + +VA + +V SWG G GRLGHG S + +TP IK L
Sbjct: 67 HQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 117
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
G+++K A G H + G V +G ++ + + P I + V
Sbjct: 118 HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMV 177
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT +T G+LY WG G LG+G
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 36/174 (20%)
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A +V P P +V +S G SVA+ G V SWG G G+LGHG L
Sbjct: 7 ADEVTPPPRRVLIISA--------GASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL-- 56
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF----GDRAVDKMLFQEGN 276
+P + L+ ++ G H+ E+ R+ ++ GD F
Sbjct: 57 -------SPTQLSALDDHQIVSVTCGADHTVAYSES-RMEVYSWGWGD-------FGRLG 101
Query: 277 HARRPSLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H L + LP +++ CG H +T GE+ +WG N+NG LG+G
Sbjct: 102 HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG 155
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
gallopavo]
Length = 4334
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 154/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3525 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3584
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3585 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 3643
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G +VAV+ G V ++G G G+LG G
Sbjct: 3644 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGN----- 3696
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 3697 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3752
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP + L + E++ G HT L+S G++Y WGSN G LG+G
Sbjct: 3753 -NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG 3799
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 3579 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 3638
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A+++DG + + +G G+LGLG
Sbjct: 3639 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNS 3697
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 3698 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 3747
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 3748 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 3806
Query: 281 PSLISKL 287
P+LI+ L
Sbjct: 3807 PTLITVL 3813
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 11/189 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
+ P KV L G+ +Q + G S+A T +V++W L E S
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758
Query: 219 GFLRSTSEY 227
LRS E+
Sbjct: 759 SHLRSFLEH 767
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3446 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQ- 3501
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3502 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3551
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 3552 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3610
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+T+ G+L+T+G+ + G LG+G
Sbjct: 3611 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 3642
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVSIQQISAGTSHS 730
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 137/285 (48%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 30 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFG 89
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T +GE+ WG+N NGQLGLG
Sbjct: 90 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDT 148
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 149 EDSL--VPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 200
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K A G+ H+ + +G +Y +G ++ +
Sbjct: 201 ---TDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 257
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ G HT LTS G+LY WG N+ G +G+G
Sbjct: 258 PHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVG 302
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 83 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQ 142
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 143 LGLGDTED-SLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 201
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 202 DRL--VPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 256
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G H+ + +G++Y +G ++ GN+ +
Sbjct: 257 ------IPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGV--GNNLDQC 308
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + + P ++VV CG HT +T ++ WG NG LGIG
Sbjct: 309 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 354
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 13/194 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 187 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQ 246
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G H+ A+T DG+LY WG N GQ+G+G
Sbjct: 247 LGHGD-LEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNL 305
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 306 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 355
Query: 222 RSTSEYTPRLIKEL 235
S P++I+ L
Sbjct: 356 -SVDRNFPKIIEAL 368
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
++ ++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 1 VTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDGH 58
Query: 178 FTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
G + +VA + G +V SWG G GRLGHG S + +TP IK L
Sbjct: 59 QIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALH 109
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G+++K A G H + G V +G ++ + + P I + V
Sbjct: 110 GIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVA 169
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT +T G+LY WG G LG+G
Sbjct: 170 AGAEHTAAVTEDGDLYGWGWGRYGNLGLG 198
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G+G+ + PV + + ++CG HTL +TE V+A G GQ
Sbjct: 291 WGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 350
Query: 103 LGISENIGYS----LEPLRISG 120
LGI E++ + +E L + G
Sbjct: 351 LGIGESVDRNFPKIIEALSVDG 372
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 148/287 (51%), Gaps = 20/287 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P V S F+ ++ ++ CG HT +E VY+ G DFG
Sbjct: 37 WGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFG 96
Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+L G S ++ ++ +P++ + GLK + QI+ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 97 RLGHGNSSDV-FTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG 153
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P K++ + K A G E + AVT G + WG G G LG G + L
Sbjct: 154 TTEDSL--LPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL 211
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P + +EG K+ + A G+ H+ + ++G +Y +G ++ +
Sbjct: 212 ---------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 262
Query: 279 RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ G HT LTS G+LY WG N+ G +G+G
Sbjct: 263 LVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVG 309
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 137/285 (48%), Gaps = 17/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 90 WGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQ 149
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + V+ I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 150 LGLG-TTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 208
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 209 DRL--LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL--- 263
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + + G+ H+ + G++Y +G ++ + P
Sbjct: 264 ------VPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSP 317
Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S P + +V CG HT L+ +++WG +G LG G
Sbjct: 318 GQVS-FPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNG 361
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 19/234 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P S+ E + +ACG HT+ ++++G +Y G + +GQ
Sbjct: 194 WGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ LK + QIS G+ H+ A+T +G+LY WG N GQ+G+G
Sbjct: 254 LGHGDFEDH-LVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNND 312
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P +V Q A G+ ++A++ V SWG G SG+LG+G+
Sbjct: 313 DH--SSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGE-------- 362
Query: 222 RSTSEYTPRLIKEL--EGVKVK----IAAAGFLHSACIDENGRVYIFGDRAVDK 269
TP LI L +G K AA F + + R I D V K
Sbjct: 363 -IVDRNTPVLIDALSSDGSACKKLESSTAAPFAAKVWVSPSERYAIVPDENVRK 415
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ VV +S G HS A+ L WG+ +GQLG G ++ +PT +
Sbjct: 13 QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRL--VPTVLSGFDAPAITSV 70
Query: 183 ALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + + A + +V SWG G GRLGHG S + +TP+ +K L+G+K+K
Sbjct: 71 ICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDV---------FTPQPVKALQGLKIK 121
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC------ 295
A G H + G V +G ++ G SL+ + + E VC
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQL----GLGTTEDSLLPQKIQAFESVCVKMIAA 177
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT +T G+LY WG G LG+G
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGRYGNLGLG 205
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V+ ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4279 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4325
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4333 PTLVTGL 4339
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4168
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 148/294 (50%), Gaps = 18/294 (6%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVY 93
L A WG G+ G+LG G E R +P + S A+ G +++ L++ VY
Sbjct: 30 LSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVY 89
Query: 94 ATGLNDFGQLGISE-NIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+ G DFG+LG + N + +P+R ++G + +V+++ G H+ A+T GEL+ +G+N
Sbjct: 90 SWGWGDFGRLGHGDCNDVFIPQPIRALAG--RNIVKVACGDTHTLAVTDTGELFSFGRNQ 147
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
NGQLGLG + ++P P VE L G A G E S+A T G V +WG G G LG
Sbjct: 148 NGQLGLGTTSDAILPQP--VESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGV 205
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + P + LEGVKV A G+ HS DE G VY FG ++
Sbjct: 206 GPPED---------RHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLG 256
Query: 272 FQEGNHARRPSLISKLPYSEEV-VCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
+ P + L S V + GG+ HT G+LY+WG N+ G LGIG
Sbjct: 257 HGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIG 310
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 141/282 (50%), Gaps = 15/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G + P A ++ +ACG HTL +T+TG +++ G N GQ
Sbjct: 91 WGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ ++ P + L+ +EV I+ G HS A T G+++ WG G LG+G
Sbjct: 151 LGLG-TTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPE 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P++V L G+ A G+ S+A G V ++G G+LGHG
Sbjct: 210 DRH--LPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGD-------- 259
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P+ ++ L+ ++ + A G+ H++ D++G++Y +G ++ + P
Sbjct: 260 -CIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAP 318
Query: 282 SLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L S + + CG HT +T G++++WG NG LG
Sbjct: 319 VPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLG 360
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LG+G E R P E + ++ACG H++ ETG VY G + +GQ
Sbjct: 195 WGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQ 254
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + I L P + LK +V I+ G+ H+SA G+LY WG N GQLG+G
Sbjct: 255 LGHGDCID-QLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNT 313
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+P V+ L+ K + G+ + AVT G V SWG G +G+LGH + +
Sbjct: 314 DSNAPVP--VQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPV 371
Query: 222 R 222
R
Sbjct: 372 R 372
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V +S G HS A+ +G WG+ +GQLG G A+ P + L
Sbjct: 16 VTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGD--AEERKKPRAIFHLMQASCSAVCS 73
Query: 185 GFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVA++ +V SWG G GRLGHG + + + P+ I+ L G +
Sbjct: 74 GAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDV---------FIPQPIRALAGRNIVKV 124
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
A G H+ + + G ++ FG ++ + A P + L E + CGG H+
Sbjct: 125 ACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSL 184
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
TS G+++ WG G LG+G
Sbjct: 185 AATSAGDVFAWGWGRYGNLGVG 206
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
+S + + G S+A+ G LSWG G G+LGHG + PR I
Sbjct: 10 AVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGD---------AEERKKPRAI 60
Query: 233 KELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
L +G +S + + VY +G ++ + N P I L
Sbjct: 61 FHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRN 120
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG HT +T GEL+++G N+NG LG+G
Sbjct: 121 IVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLG 154
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3693 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3752
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3753 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 3811
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 3812 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 3864
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 3865 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3920
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 3921 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 3967
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 3747 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 3806
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 3807 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 3865
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 3866 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 3915
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 3916 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 3974
Query: 281 PSLISKL 287
P++++ L
Sbjct: 3975 PTVVTGL 3981
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ P KV L GI +Q + G S+A T
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3614 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3669
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3670 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3719
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 3720 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3778
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 3779 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 3810
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Equus caballus]
Length = 4860
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV T G V ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4279 -NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4325
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4333 PTLVTVL 4339
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP L+ +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+L++EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P + L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4168
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P VE L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 146/286 (51%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P V S F+ ++ ++ CG HT +E VY+ G DFG
Sbjct: 37 WGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFG 96
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + GLK + QI+ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 97 RLGHGNSSDVFTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGT 154
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ + K A G E + AVT G + WG G G LG G + L
Sbjct: 155 TEDSL--LPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL- 211
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P + +EG K+ + A G+ H+ + ++G +Y +G ++ +
Sbjct: 212 --------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL 263
Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ G HT LTS G+LY WG N+ G +G+G
Sbjct: 264 VPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVG 309
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ VV +S G HS A+ L WG+ +GQLG G ++ +PT +
Sbjct: 12 PQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRL--VPTVLSGFDAPAITS 69
Query: 182 AALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
G + + A + +V SWG G GRLGHG S + +TP+ +K L+G+K+
Sbjct: 70 VICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDV---------FTPQPVKALQGLKI 120
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC----- 295
K A G H + G V +G ++ G SL+ + + E VC
Sbjct: 121 KQIACGDSHCLAVTMAGEVQSWGRNQNGQL----GLGTTEDSLLPQKIQAFESVCVKMIA 176
Query: 296 -GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT +T G+LY WG G LG+G
Sbjct: 177 AGAEHTAAVTEDGDLYGWGWGRYGNLGLG 205
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + ++ ++ G HT+ LT G +Y G N FGQ+G+
Sbjct: 251 YGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGN 310
Query: 108 NIGYSLEPLRIS 119
N +S P ++S
Sbjct: 311 NDDHS-SPGQVS 321
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 148/286 (51%), Gaps = 17/286 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G +++ +P + AF +++ ++CG HT L E G V+ G +FGQ
Sbjct: 11 WGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQ 70
Query: 103 LGISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ ++ P +S L+ K V Q++ G+HH+ A+ +G+LY WG G+LG G +
Sbjct: 71 LGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDE 130
Query: 161 AAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P VE L G T AA GF SV + GG +L+WG G G+LGHG E
Sbjct: 131 VRQA--SPKLVESLQGKEVTFVAAGGFHSSVIIE-GGNLLTWGGGYFGQLGHGDE----- 182
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T TP+++K ++ A G H+ + ++ V+ +G K+ +
Sbjct: 183 ----TDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHA 238
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +I+ L + GG+H+ LTS G LYTWG + G LG G
Sbjct: 239 EPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHG 284
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 120/234 (51%), Gaps = 11/234 (4%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
VY+ G GQLG + L ++ L V Q+S G H++ + +GE++ +G+ +
Sbjct: 8 VYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGN 67
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G + P V L G KQ A G+ + A+ G++ +WG+G GRLGH
Sbjct: 68 FGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGH 127
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G E + +P+L++ L+G +V AAG HS+ I E G + +G ++
Sbjct: 128 GDE---------VRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178
Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P ++ + + EV CG +HT +LT E++TWGS E G LGIG
Sbjct: 179 HGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIG 232
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G R P + ++ +ACG HTL LT++ V+ G +FG+
Sbjct: 169 WGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGK 228
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI + ++ EP+ I+ L+ V+ ISTG HS+A+T +G LY WG GQLG G +
Sbjct: 229 LGIGDEEKHA-EPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDEN 287
Query: 162 AKVIPIPTKV 171
++ IP+ +V
Sbjct: 288 SQNIPVVVEV 297
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+YGRLG G + P + + + + +A GG H+ + E G + G FGQ
Sbjct: 117 WGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQ 176
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + P + G+++ + +++ G HH+ +T E++ WG G+LG+G +
Sbjct: 177 LGHGDETDRKT-PKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEE 235
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
PI + L G+ + G S A+T G + +WG G G+LGHG E+S
Sbjct: 236 KHAEPI--MITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENS 288
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 71/134 (52%), Gaps = 15/134 (11%)
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G +V SWG G G+LGHG E ++ PRL+ G V+ + G H+A +
Sbjct: 5 GSEVYSWGQGVLGQLGHGDEK---------TQRQPRLVVAFLGFNVRQVSCGNQHTAILM 55
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGEL 309
ENG V+ FG R L Q + + P+L+S L + ++V CG +HTC L G+L
Sbjct: 56 ENGEVFTFG-RGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQL 114
Query: 310 YTWGSNENGCLGIG 323
YTWGS E G LG G
Sbjct: 115 YTWGSGEYGRLGHG 128
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 2505 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2564
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 2565 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2623
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 2624 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 2676
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 2677 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 2732
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 2733 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 2779
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 2559 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2618
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 2619 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2677
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 2678 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 2727
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 2728 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 2786
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 2787 PTLVTGL 2793
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 2426 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 2481
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 2482 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2531
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 2532 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2590
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 2591 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 2622
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4104 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4162
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V+ ++G G G+LG G
Sbjct: 4163 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4215
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4216 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4271
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4272 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4318
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4098 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4157
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4158 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4216
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4217 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4266
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4267 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4325
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4326 PTLVTVL 4332
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+++T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3965 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4020
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4021 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4070
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4071 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4129
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4130 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4161
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S ++T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4015 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4074
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4075 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4133
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4134 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4186
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4187 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4242
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4243 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4289
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4069 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4128
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4129 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4187
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4188 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4237
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4238 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4296
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4297 PTLVTGL 4303
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3936 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3991
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3992 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4041
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4042 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4100
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4101 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4132
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 1632 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1691
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 1692 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 1750
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 1751 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 1803
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 1804 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 1859
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 1860 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 1906
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 1686 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 1745
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 1746 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1804
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 1805 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 1854
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 1855 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 1913
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 1914 PTLVTGL 1920
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 1553 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 1608
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 1609 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 1658
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 1659 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 1717
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 1718 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 1749
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4057 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4116
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+++ +G G+LGLG
Sbjct: 4117 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGN 4175
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV T G V ++G G G+LG G
Sbjct: 4176 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN----- 4228
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4229 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4284
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP + L E+V G HT +TS G++Y WGSN G LG+G
Sbjct: 4285 -NRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLG 4331
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4111 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGR 4170
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4171 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4229
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4230 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4279
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ I G VY +G + ++ NH R
Sbjct: 4280 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVRE 4338
Query: 281 PSLISKL 287
P+LI+ L
Sbjct: 4339 PTLITVL 4345
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP L+ +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
+Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 318 GCLGIG 323
G LG G
Sbjct: 592 GKLGHG 597
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+L++EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P + L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P VE L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + IP S
Sbjct: 3978 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAGAPSFSQ- 4033
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4034 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4083
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4084 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4142
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+T+ G+++T+G+ + G LG+G
Sbjct: 4143 QMSCGFKHSAVVTADGKMFTFGNGDYGRLGLG 4174
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4097 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V+ ++G G G+LG G
Sbjct: 4156 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4208
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4209 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4264
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4265 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4311
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4150
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4151 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4210 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4259
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4260 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4318
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4319 PTLVTVL 4325
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+++T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3958 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4013
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4014 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4064 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4154
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S ++T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4104 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4162
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4163 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4215
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4216 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4271
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4272 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4318
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4098 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4157
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4158 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4216
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4217 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4266
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4267 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4325
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4326 PTLVTGL 4332
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3965 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4020
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4021 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4070
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4071 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4129
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4130 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4161
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4097 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4156 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4208
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4209 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4264
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4265 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4311
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4150
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4151 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4210 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4259
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4260 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4318
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4319 PTLVTGL 4325
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3958 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4013
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4014 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4064 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4154
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4105 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4163
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4164 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4216
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4217 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4273 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4319
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4099 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4158
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4159 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4217
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4218 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4267
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4268 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4326
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4327 PTLVTGL 4333
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3966 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4021
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4022 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4071
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4072 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4130
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4131 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4162
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L G+ ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 146/286 (51%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT +E VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFG 97
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + GLK + QI+ G H A+T+ G++ WG+N NGQLGLG
Sbjct: 98 RLGHGNSSDVFTPQPVKALQGLK--IKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGT 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E + AVT G + WG G G LG G + L
Sbjct: 156 TEDSL--LPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL- 212
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P + +EG K+ + A G+ H+ + ++G +Y +G ++ +
Sbjct: 213 --------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL 264
Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ G HT LTS G+LY WG N+ G +G+G
Sbjct: 265 VPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVG 310
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 17/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 91 WGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + V+ I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 151 LGLG-TTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 210 DRL--LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL--- 264
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + + G+ H+ + G++Y +G ++ + P
Sbjct: 265 ------VPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSP 318
Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P + +V CG HT L+ +++WG +G LG G
Sbjct: 319 VQV-HFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNG 362
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 125/265 (47%), Gaps = 26/265 (9%)
Query: 19 KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
K+ + G+C + I++ + A WG G YG LGLG R P S+ E
Sbjct: 164 KIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGE 223
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
+ +ACG HT+ ++++G +Y G + +GQLG + + L P ++ LK + QIS
Sbjct: 224 KMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDSTISQISG 282
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G+ H+ A+T +G+LY WG N GQ+G+G P+ +V Q A G+ ++
Sbjct: 283 GWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPV--QVHFPEDQKISQVACGWRHTL 340
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVK----IAA 244
A++ V SWG G SG+LG+G+ TP LI L +G K A
Sbjct: 341 ALSEKKNVFSWGRGTSGQLGNGE---------IVDRNTPVLIDALSTDGSGCKKLESSTA 391
Query: 245 AGFLHSACIDENGRVYIFGDRAVDK 269
A F + + R I D V K
Sbjct: 392 APFAAKVWVSPSERYAIVPDENVPK 416
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 106/255 (41%), Gaps = 64/255 (25%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP---------------- 166
+ VV +S G HS A+ L WG+ +GQLG G +++P
Sbjct: 14 QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVIC 73
Query: 167 -----------------------------------IPTKVECLSGIFTKQAALGFEQSVA 191
P V+ L G+ KQ A G +A
Sbjct: 74 GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLA 133
Query: 192 VTGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
VT G+V SWG +G+LG G E S+L P+ I+ EGV VK+ AAG H+
Sbjct: 134 VTMAGQVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFEGVCVKMIAAGAEHT 183
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGE 308
A + E+G +Y +G + + N P +S + + V+ CG HT ++ G
Sbjct: 184 AAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGN 243
Query: 309 LYTWGSNENGCLGIG 323
LYT+G ++ G LG G
Sbjct: 244 LYTYGWSKYGQLGHG 258
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 154/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + + +CG H++ LTE+G V++ G D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4097 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGN 4155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4156 TSNK--KLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGN----- 4208
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4209 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNH 4264
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP + L + E+V G HT L+S G++Y WGSN G LG+G
Sbjct: 4265 -NRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLG 4311
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G +++ G D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGR 4150
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG+ L P R+S L+ +V Q++ G +H+ A++ DG ++ +G G+LGLG
Sbjct: 4151 LGLGNTSNKKL-PERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNS 4209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4210 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEG-------- 4259
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4260 -RARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVRE 4318
Query: 281 PSLISKL 287
P+LIS L
Sbjct: 4319 PTLISAL 4325
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H ++K ++ HTL T G V++ G D
Sbjct: 423 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGD 481
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A++ DGELY WG+ G+LG G
Sbjct: 482 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 541
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IP T V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 542 DSNSRNIP--TLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 597
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 598 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 647
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 648 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 695
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 362 MVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISSDG 417
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 418 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSW 477
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 478 GDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELY 528
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 529 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 588
Query: 320 LGIG 323
LG G
Sbjct: 589 LGHG 592
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 581 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 638
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L VV IS G H A++ D E+Y WG NS GQ G G
Sbjct: 639 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 698
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 699 GPITK-PKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 740
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+SG+ ++V+ +T + ++++WG +GQL +A + I +PT S
Sbjct: 3958 VSGMDEQVMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNILVPTLAPSFSQ- 4013
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G V + G G GRLG G + + +I L+G
Sbjct: 4014 -AQQVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4064 FVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+++G+ + G LG+G
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLG 4154
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 530 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 587
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 588 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 644
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 645 EATAL-RPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 696
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 697 --STGPITKPKKVIGLDGVAIQQISAGTSHS 725
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Pongo abelii]
Length = 4864
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4115 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4173
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4174 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4226
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4227 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4283 -NRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4329
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4109 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4168
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4169 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4228 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4277
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4278 -RARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4336
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4337 PTLVTGL 4343
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3976 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4031
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4032 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4081
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4082 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4140
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4141 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4172
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 152/291 (52%), Gaps = 29/291 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ CG HTL +E+ VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFG 98
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + + +P+R + GL+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLGHGNSSDLFIPQPIRALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT 156
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 157 TEDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND--- 211
Query: 220 FLRSTSEYTPRLIKELEGV---KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
R I E V K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 212 ----------RCIPEKVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGDCK 261
Query: 277 HARRPSLISKLPYSEEVVC---GGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + +S++++C GG+ HT LT+GG+LY WG N+ G +G+G
Sbjct: 262 DHLVPHKLQA--FSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVG 310
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 143/286 (50%), Gaps = 20/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + ++ ++ G HS AIT +GELY WG G LGLG +
Sbjct: 152 LGLGTTED-SLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ IP V+C + A G+ +++V+ G++ ++G G+LGHG L
Sbjct: 211 DRCIPEKVSVDCDKMVLV---ACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHL-VP 266
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
++ +LI ++ G G+ H+ + G++Y +G ++ G++ R
Sbjct: 267 HKLQAFSDKLICQVSG--------GWRHTMALTTGGQLYGWGWNKFGQVGV--GDNVDRC 316
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + K P+ ++V CG HT +T +Y+WG NG LGIG
Sbjct: 317 SPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIG 362
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 123/251 (49%), Gaps = 15/251 (5%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ GG+H++ L V + G + GQLG + L P ++S L +++V + G H
Sbjct: 20 ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDT-DDRLLPTQLSALDAQQIVSVVCGADH 78
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + E+Y WG G+LG G + IP P + L G+ KQ A G +AVT
Sbjct: 79 TLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQP--IRALQGLRIKQIACGDSHCLAVT 136
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ +GV +K+ AAG HS I
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQTFQGVPIKMVAAGAEHSVAI 187
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPYSEEVVCGGYHTCVLTSGGELYTW 312
ENG +Y +G + + N P +S V CG HT ++S GELYT+
Sbjct: 188 TENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGWRHTISVSSSGELYTY 247
Query: 313 GSNENGCLGIG 323
G ++ G LG G
Sbjct: 248 GWSKYGQLGHG 258
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G+G R PV + ++CG HT+ +TE VY+ G GQ
Sbjct: 299 WGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQ 358
Query: 103 LGISENIGYS----LEPLRISG 120
LGI + I ++ +E L + G
Sbjct: 359 LGIGDTIDWNYPKIIEALSVDG 380
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
Length = 4798
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3989 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4048
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4049 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4107
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4108 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4160
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4161 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4216
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4217 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4263
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4043 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4102
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++VDG + + +G G+LGLG
Sbjct: 4103 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4161
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4162 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4211
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4212 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4270
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4271 PTLVTGL 4277
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3910 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3965
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3966 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4015
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4016 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4074
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4075 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4106
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4019 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4078
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4079 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4137
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4138 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4190
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4191 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4246
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4247 -NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4293
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4073 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4132
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4133 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4191
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4192 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4241
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4242 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4300
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4301 PTLVTVL 4307
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3940 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3995
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3996 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4045
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4046 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4104
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4105 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4136
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C FE ++ + CG HT+FL E G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P ++ L + +V +S G H+ A+ G+++ WG S+GQLGL
Sbjct: 64 GQLGHEKA---RKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P V+ LS + Q A G+ S+A+ GG++ SWG G+LG GQ+ + +
Sbjct: 120 IVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVC 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+P++I+ L+G+ +AG HS + +G ++ +G ++ + + R
Sbjct: 180 --------SPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRR 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P L+ L S++VV CG HT LT G ++T+G+ G LG
Sbjct: 232 FPVLLKTL-RSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL +E R P + + + +ACG H+L L G +++ G N +G
Sbjct: 108 WGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P I L+ QIS G HS +T+ G ++ WG+N GQLGLG
Sbjct: 168 QLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDN 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ K L G + + A+T G V ++GAGG G+LGH
Sbjct: 228 DDRRFPVLLKT--LRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
+ E PR + EL G V A G H+ A I +G++ FG
Sbjct: 279 --TNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFG 320
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 107/232 (46%), Gaps = 23/232 (9%)
Query: 100 FGQLG---ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
FGQLG I E + LEP R + K V + G H+ + DG +Y G N GQL
Sbjct: 9 FGQLGLGGIDEEV--LLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQL 66
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K K P +V L + G ++A+ G+V +WG G G+LG S
Sbjct: 67 GHEKARKK----PEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGL---S 119
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQE 274
+ LR PR +K L V + A G+ HS + G ++ +G ++ L Q+
Sbjct: 120 IVEDCLR-----VPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQ 174
Query: 275 GNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G P +I L P+ + + GG H+ LT G ++ WG N+ G LG+G
Sbjct: 175 GACVCSPQVIQSLQGIPFGQ-ISAGGAHSFGLTLSGAIFGWGRNKFGQLGLG 225
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG + R PV+ + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L VV QI+ G H+ A I G++ +G NGQLG
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRST 332
Query: 161 AAKVIPIPTK 170
++ P P K
Sbjct: 333 CNRISPTPVK 342
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +V+ P + E G + G +V + G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + + P + L+ + + G H+ +++ G+V+ +G +
Sbjct: 64 GQLGHEK-----------ARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + R P + L + +V CG +H+ L GGE+++WG N+ G LG+G
Sbjct: 113 DGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLG 172
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++VDG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4105 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4163
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 4164 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4216
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4217 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4273 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4319
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4099 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4158
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++VDG + + +G G+LGLG
Sbjct: 4159 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4217
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4218 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4267
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4268 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4326
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4327 PTLVTGL 4333
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3966 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4021
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4022 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4071
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4072 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4130
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4131 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4162
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4332 PTLVTVL 4338
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4167
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4106
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4107 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4165
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4166 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4218
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4219 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4274
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4275 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4321
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4101 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4160
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4161 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4219
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4220 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4269
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4270 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4328
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4329 PTLVTVL 4335
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
+Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 318 GCLGIG 323
G LG G
Sbjct: 592 GKLGHG 597
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3968 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4023
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4024 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4073
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4074 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4132
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4133 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4164
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTVL 4340
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 145/288 (50%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G L E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQG 700
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KMALSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSM 694
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G A+ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A+ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Felis catus]
Length = 4861
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTVL 4340
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 481 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
+Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591
Query: 318 GCLGIG 323
G LG G
Sbjct: 592 GKLGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4121 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4179
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4180 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4232
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4233 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4288
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4289 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4335
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4115 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4174
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4175 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4234 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4283
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4284 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4342
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4343 PTLVTVL 4349
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3982 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4037
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4038 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4087
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4088 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4146
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4147 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4178
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4326
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTVL 4340
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 145/286 (50%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT + E VY+ G DFG
Sbjct: 45 WGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSWGWGDFG 104
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P+R + G+K + Q++ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 105 RLGHGNSSDVFTPQPVRALQGIK--IKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGT 162
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ GI K A G E + AVT G + WG G G LG G +
Sbjct: 163 TEDSL--LPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN---- 216
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P + +EG K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 217 -----DRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHL 271
Query: 280 RPSLISKL-PYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + L S + GG+ HT LTS G+LY WG N+ G +G G
Sbjct: 272 FPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAG 317
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 135/286 (47%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 98 WGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQ 157
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + V+ I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 158 LGLG-TTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 216
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 217 DRF--VPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHL--- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + G+ H+ + +G++Y +G ++ G+
Sbjct: 272 ------FPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQV--GAGDSVDHC 323
Query: 282 SLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + + +E +V CG HT T ++ WG +G LG G
Sbjct: 324 SPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHG 369
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 19 KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
K+ + GIC + I++ + A WG G YG LGLG R+ P S E
Sbjct: 171 KIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGE 230
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
+ +ACG HT+ ++ +G +Y G + +GQLG + + L P ++ LK QIS
Sbjct: 231 KMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDH-LFPHKVEALKDSSTSQISG 289
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G+ H+ A+T DG+LY WG N GQ+G G P+ + Q A G+ ++
Sbjct: 290 GWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKV--AQVACGWRHTL 347
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQ 213
A T V +WG G SG+LGHG+
Sbjct: 348 AYTEKKNVFAWGRGTSGQLGHGE 370
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 106/253 (41%), Gaps = 64/253 (25%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP------------------ 166
VV +S G HS A+ L WG+ +GQLG G +++P
Sbjct: 23 VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGA 82
Query: 167 ---------------------------------IPTKVECLSGIFTKQAALGFEQSVAVT 193
P V L GI KQ A G +AVT
Sbjct: 83 DHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVT 142
Query: 194 GGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
GG+V SWG +G+LG G E S+L P+ I+ EG+ VK+ AAG H+A
Sbjct: 143 MGGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFEGICVKMIAAGAEHTAA 192
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
+ E+G +Y +G + + N P +S + + V+ CG HT ++S G LY
Sbjct: 193 VTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILY 252
Query: 311 TWGSNENGCLGIG 323
T+G ++ G LG G
Sbjct: 253 TYGWSKYGQLGHG 265
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + S ++ G HT+ LT G +Y G N FGQ+G +
Sbjct: 259 YGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD 318
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
++ + + +++V Q++ G+ H+ A T ++ WG+ ++GQLG G+ + P+
Sbjct: 319 SVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPL 378
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
G +K+ E S AV KV
Sbjct: 379 MIDAISPDGSGSKK----LESSTAVPFTAKV 405
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP + L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4279 -NRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4325
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4333 PTLVTGL 4339
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4168
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4049 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4108
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4109 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4167
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4168 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGN----- 4220
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4221 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4276
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4277 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4323
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S++ ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4103 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4162
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4163 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNS 4221
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4222 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4271
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4272 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4330
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4331 PTLVTVL 4337
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 LVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3970 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4025
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4026 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4075
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4076 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4134
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4135 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4166
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4041 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4100
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4101 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4159
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4160 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4212
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4213 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4268
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4269 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4315
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4095 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4154
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4155 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4213
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4214 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4263
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4264 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4322
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4323 PTLVTVL 4329
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3962 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4017
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4018 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4067
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4068 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4126
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4127 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4158
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4121 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4179
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4180 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4232
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4233 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4288
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4289 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4335
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4115 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4174
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4175 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4234 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4283
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4284 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4342
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4343 PTLVTVL 4349
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3982 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4037
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4038 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4087
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4088 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4146
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4147 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4178
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4332 PTLVTVL 4338
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4167
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 152/288 (52%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 207 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 266
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 267 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 325
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 326 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 378
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 379 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 434
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 435 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 481
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 261 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 320
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 321 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 379
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 380 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 429
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 430 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 488
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 489 PTLVTVL 495
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 128 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 183
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 184 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 233
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 234 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 292
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 293 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 324
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 2698 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2757
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 2758 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2816
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 2817 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 2869
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 2870 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 2925
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 2926 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 2972
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 2752 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2811
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 2812 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2870
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 2871 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 2920
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 2921 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 2979
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 2980 PTLVTVL 2986
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 2619 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 2674
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 2675 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2724
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 2725 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2783
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 2784 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 2815
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4332 PTLVTVL 4338
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4167
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4332 PTLVTVL 4338
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4167
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 152/288 (52%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 1663 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1722
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 1723 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 1781
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G V ++G G G+LG G
Sbjct: 1782 TSNKKLP--ERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 1834
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 1835 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 1890
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 1891 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 1937
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 1717 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 1776
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 1777 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1835
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 1836 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 1885
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 1886 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 1944
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 1945 PTLVTVL 1951
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 1584 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 1639
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 1640 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 1689
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 1690 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 1748
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 1749 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 1780
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Anolis carolinensis]
Length = 4963
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4143 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4202
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4203 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4261
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
+ K +P +V L G + A G ++ V T G V ++G G G+LG G
Sbjct: 4262 TSNK--KLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGN----- 4314
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4315 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4370
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP + L + E++ G HT L++ G++Y WGSN G LG+G
Sbjct: 4371 -NRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLG 4417
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 430 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 488
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 489 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 548
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 549 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 604
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 605 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 654
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 655 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 702
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4197 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4256
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ +++ G +H+ ++ DG + + +G G+LGLG
Sbjct: 4257 LGLGNTSNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNS 4315
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4316 TAKS--SPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4365
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV V+ A G H+ + +G VY +G + ++ NH R
Sbjct: 4366 -RARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVRE 4424
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4425 PTLVTSL 4431
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 117/215 (54%), Gaps = 22/215 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
+GNGDYGRLGLG+ ++ P +A E + + +ACG HTL ++ G V+A G D+G
Sbjct: 4249 FGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYG 4308
Query: 102 QLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+LG+ + S P ++ G+KK ++ G S A+T DG +Y +G++ +G
Sbjct: 4309 KLGLGNSTAKS-SPQKVDILCGIGIKK----VACGTQFSVALTKDGHVYTFGQDR--LIG 4361
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L + A+ P +V LSG+F + A+G E ++A++ G V +WG+ G+LG G +
Sbjct: 4362 LPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNH 4421
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ P L+ L+G V+ +AG HSA
Sbjct: 4422 V---------REPTLVTSLQGKSVRQISAGRCHSA 4447
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 121/249 (48%), Gaps = 18/249 (7%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
G ++ET VY G N QL G E I L+P +++ + I G + +
Sbjct: 364 GGDAPVVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFV 419
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGG 196
I+ DG + GK S G+LGLG + E I ++ G + ++A T G
Sbjct: 420 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEG 479
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDE 255
+V SWG G G+LGHG S+++ P+LI+ L+G V +AG+ HSA + E
Sbjct: 480 EVFSWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGS 314
+G +Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G
Sbjct: 531 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG 590
Query: 315 NENGCLGIG 323
+NG LG G
Sbjct: 591 GDNGKLGHG 599
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 484 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 543
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 544 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 600
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 601 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 655
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 656 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 696
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 588 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 645
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 646 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 705
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 706 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 747
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 537 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 594
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 595 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 651
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 652 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 703
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 704 --STGPITKPKKVSGLDGVAIQQISAGTSHS 732
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++++WG +GQL + A V P P+ C + +Q G + + G VL+ G
Sbjct: 4089 DVFLWGAGRHGQLAEAGRNA-VSPPPSPSFCQA----QQVICGQNCTFVIQANGTVLACG 4143
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
G GRLG G + + +I L+G V + + G HS + E+G V
Sbjct: 4144 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4194
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
+ +GD K+ + RRP I L EEVV CG H+ V+T+ G+L+T+G+ +
Sbjct: 4195 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4253
Query: 317 NGCLGIG 323
G LG+G
Sbjct: 4254 YGRLGLG 4260
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4324
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4332 PTLVTVL 4338
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4167
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4056 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4115
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EV+Q+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4116 GKLGHG-NSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4174
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4175 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4227
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4228 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4283
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4284 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4330
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4110 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4169
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4170 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4228
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4229 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4279 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4337
Query: 281 PSLISKL 287
P+LI+ L
Sbjct: 4338 PTLITVL 4344
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A++ DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IP T V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRNIP--TLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + IP S
Sbjct: 3977 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQ- 4032
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4033 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4082
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEV+
Sbjct: 4083 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVI 4141
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4142 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4173
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
Length = 4860
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4222
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP + L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4279 -NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4325
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4224 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4274 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4332
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4333 PTLVTVL 4339
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4168
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 144/286 (50%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT +E VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFG 97
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + G+K + Q++ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 98 RLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ GI K A G E + AVT G + WG G G LG G +
Sbjct: 156 TEDSL--LPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN---- 209
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P + +EG K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 210 -----DRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 264
Query: 280 RPSLISKL-PYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + L S + GG+ HT LTS G+LY WG N+ G +G G
Sbjct: 265 VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAG 310
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 17/266 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K LACG +H L +T G V + G N GQ
Sbjct: 91 WGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P I + V I+ G H++A+T DG++Y WG G LGLG +
Sbjct: 151 LGLGTTED-SLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 210 DRF--VPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL--- 264
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + G+ H+ + +G++Y +G ++ + P
Sbjct: 265 ------VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSP 318
Query: 282 SLISKLPYSE---EVVCGGYHTCVLT 304
+ ++ P + +V CG HT T
Sbjct: 319 AQVN-FPEEQKVAQVACGWRHTLAFT 343
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 107/253 (42%), Gaps = 64/253 (25%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP------------------ 166
VV +S G HS A+ L WG+ +GQLG G +++P
Sbjct: 16 VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGA 75
Query: 167 ---------------------------------IPTKVECLSGIFTKQAALGFEQSVAVT 193
P V+ L GI KQ A G +AVT
Sbjct: 76 DHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVT 135
Query: 194 GGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+VLSWG +G+LG G E S+L P+ I+ EG+ VK+ AAG H+A
Sbjct: 136 MAGEVLSWGRNQNGQLGLGTTEDSLL----------PQTIQAFEGISVKMIAAGAEHTAA 185
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
+ E+G +Y +G + + N P +S + + V+ CG HT ++S G LY
Sbjct: 186 VTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLY 245
Query: 311 TWGSNENGCLGIG 323
T+G ++ G LG G
Sbjct: 246 TYGWSKYGQLGHG 258
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 144/286 (50%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G E R P V S F+ + ++ CG HT +E VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFG 97
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P++ + G+K + Q++ G H A+T+ GE+ WG+N NGQLGLG
Sbjct: 98 RLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ GI K A G E + AVT G + WG G G LG G +
Sbjct: 156 TEDSL--LPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN---- 209
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P + +EG K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 210 -----DRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 264
Query: 280 RPSLISKL-PYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + L S + GG+ HT LTS G+LY WG N+ G +G G
Sbjct: 265 VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAG 310
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 133/285 (46%), Gaps = 17/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K LACG +H L +T G V + G N GQ
Sbjct: 91 WGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P I + V I+ G H++A+T DG++Y WG G LGLG +
Sbjct: 151 LGLG-TTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 210 DRF--VPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL--- 264
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + G+ H+ + +G++Y +G ++ + P
Sbjct: 265 ------VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSP 318
Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ P + +V CG HT T ++ WG +G LG G
Sbjct: 319 AQVN-FPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHG 362
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R+ P S+ E + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 195 WGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ LK QIS G+ H+ A+T DG+LY WG N GQ+G G A
Sbjct: 255 LGHGDFEDH-LVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNA 313
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
P +V Q A G+ ++A T V +WG G SG+LGHG+
Sbjct: 314 DHCSP--AQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGE 363
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 107/253 (42%), Gaps = 64/253 (25%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP------------------ 166
VV +S G HS A+ L WG+ +GQLG G +++P
Sbjct: 16 VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGA 75
Query: 167 ---------------------------------IPTKVECLSGIFTKQAALGFEQSVAVT 193
P V+ L GI KQ A G +AVT
Sbjct: 76 DHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVT 135
Query: 194 GGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+VLSWG +G+LG G E S+L P+ I+ EG+ VK+ AAG H+A
Sbjct: 136 MAGEVLSWGRNQNGQLGLGTTEDSLL----------PQTIQAFEGISVKMIAAGAEHTAA 185
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
+ E+G +Y +G + + N P +S + + V+ CG HT ++S G LY
Sbjct: 186 VTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLY 245
Query: 311 TWGSNENGCLGIG 323
T+G ++ G LG G
Sbjct: 246 TYGWSKYGQLGHG 258
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + S ++ G HT+ LT G +Y G N FGQ+G +
Sbjct: 252 YGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD 311
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N + P +++ +++V Q++ G+ H+ A T ++ WG+ ++GQLG G+ + P
Sbjct: 312 NADH-CSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTP 370
Query: 167 I 167
+
Sbjct: 371 V 371
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3981 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4040
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EV+Q+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4041 GKLGHG-NSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4099
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4100 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4152
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4153 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4208
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E++ G HT L S G++Y WGSN G LG+G
Sbjct: 4209 -NRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4255
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4035 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4094
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4095 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4153
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4154 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4203
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + G VY +G + ++ NH R
Sbjct: 4204 -RARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4262
Query: 281 PSLISKL 287
P+LI+ L
Sbjct: 4263 PTLITIL 4269
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + IP S
Sbjct: 3902 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQ- 3957
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3958 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4007
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEV+
Sbjct: 4008 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVI 4066
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4067 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4098
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 145/285 (50%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P C F + + CG HT+FL + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P + L ++ V +S G H+ A+ G+++ WG SNGQLGL
Sbjct: 64 GQLGHEKS---RKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNN 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P ++CLS + Q A G+ S A++ GG+V SWG G+LG G S +
Sbjct: 121 -FEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TP++I+ L+G+ +AG HS I +G V+ +G ++ +
Sbjct: 180 --------TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRW 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+ V+ CG HT LT ++T+G+ G LG
Sbjct: 232 FPALLKSL-RSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLG 275
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 100 FGQLG---ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+GQLG I E I +EP + K V + G H+ + DG +Y G N GQL
Sbjct: 9 YGQLGLGGIDEEI--VVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQL 66
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K K P V L + G ++A+ G+V SWG G +G+LG
Sbjct: 67 GHEKSRKK----PEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFE 122
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQE 274
+ PR IK L V++ A G+ HS + + G+V+ +G ++ L
Sbjct: 123 ECVR--------VPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMH 174
Query: 275 GNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G+ P +I L P+++ + GG H+ +T G ++ WG N+ G LG+
Sbjct: 175 GSSISTPQIIQSLQGIPFAQ-LSAGGAHSFAITLSGAVFGWGKNKFGQLGLN 225
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K E G G + +V + G V + G
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+V+ +G +
Sbjct: 64 GQLGHEK-----------SRKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGS 112
Query: 267 VDKM---LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ F+E R P I L + +V CG +H+ L+ GG++++WG N+ G LG
Sbjct: 113 NGQLGLNNFEEC--VRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLG 170
Query: 322 IG 323
+G
Sbjct: 171 LG 172
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 14 LKQDIKLGSKLGI----CKRWISSTLQRRFAAL-WGNGDYGRLGLGSL-ESRWRPVVCSA 67
+ ++IK S + I C W S L + WG +G+LGLG S P + +
Sbjct: 127 VPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQS 186
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
+ L+ GGAH+ +T +G V+ G N FGQLG+++ L S + V+
Sbjct: 187 LQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIF 246
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+S G H++A+T ++ +G GQLG
Sbjct: 247 VSCGEDHTAALTKLRGVFTFGAGGYGQLG 275
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 149/295 (50%), Gaps = 30/295 (10%)
Query: 43 WGNGDYGRLGLG-------------SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET 89
WG+ D+GR G G E +PV+ + +K +ACGGAH++ +TE+
Sbjct: 67 WGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKL----IKKVACGGAHSMIVTES 122
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G + GLND GQLG+ N+ + E + G + + ++ G+ H+ A + G+LY WG
Sbjct: 123 GRLLTCGLNDNGQLGLG-NLENASEFEEVKG-TESIADVAAGFWHTLAASKKGKLYAWGS 180
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLG A K+ P ++ L KQ A G S+A+T G+V +WG G GRL
Sbjct: 181 NKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAHGRL 240
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG + E+ P+ ++ L G + AGF +S+ + +G+V+++G
Sbjct: 241 GHGS---------TEDEFMPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHF-Y 290
Query: 270 MLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+L Q + ++ P S ++ G +H ++ G L+TWG +G LG G
Sbjct: 291 VLGQGDKKDQLAPVVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHG 345
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 14/212 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +GRLG GS E + P A ++ ++ G ++ ++ +G V+ G F
Sbjct: 232 WGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYV 291
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+ + + Q++ G H++A++ G L+ WG ++G LG G K+
Sbjct: 292 LGQGDKKD-QLAPVVLD-FPTSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLKSP 349
Query: 163 KVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+I PT ++ + + +KQ A G + ++ VTG G V S+G LG
Sbjct: 350 NIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSFGL---------GGQGQLGLG 400
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
Y P+ I G ++ A G H CI
Sbjct: 401 SDLDHYEPKQIPRFVGKSLRQVACGLFH--CI 430
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G EQ V + G + SWG+ GR G G ++ I ++ E + + L +K
Sbjct: 51 GREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPV--LPAKLIKK 108
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
A G HS + E+GR+ G ++ +A + +V G +HT
Sbjct: 109 VACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIADVAAGFWHTLA 168
Query: 303 LTSGGELYTWGSNENGCLG 321
+ G+LY WGSN++G LG
Sbjct: 169 ASKKGKLYAWGSNKHGQLG 187
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+S S P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 -LKSQS--APQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 141/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE-L 175
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+S+ P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+S S P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 -LKSQS--APQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 141/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE-L 175
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+S+ P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 140/285 (49%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P S + + ++ CG HT +E+ VY+ G DFG
Sbjct: 42 WGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFG 101
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L ++ QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 102 RLG-HGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTT 160
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ G+ K A G E + AVT G++ WG G G LG G + L
Sbjct: 161 EDSL--VPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL-- 216
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P + + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 217 -------VPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLT 269
Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ GG+ HT LTS G LY WG N+ G +G+G
Sbjct: 270 PHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVG 314
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 19/287 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A ++ +ACG +H L +T G V + G N GQ
Sbjct: 95 WGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQ 154
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + + ++ G H++A+T DGELY WG G LGLG +
Sbjct: 155 LGLG-TTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRN 213
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV ++G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 214 DRL--VPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL--- 268
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TP ++ L + + + G+ H+ + +G +Y +G ++ + P
Sbjct: 269 ------TPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSP 322
Query: 282 SLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ K P+ + ++ CG HT +T +++WG NG LG G
Sbjct: 323 VQV-KFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHG 368
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 99/245 (40%), Gaps = 61/245 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ E P AF+ S+K +A G HT +TE G +Y G +G
Sbjct: 147 WGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGN 206
Query: 103 LGISE--------------------------------------NIGYS------------ 112
LG+ + G+S
Sbjct: 207 LGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFED 266
Query: 113 -LEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
L P ++ L+ + IS G+ H+ A+T DG LY WG N GQ+G+G P+ K
Sbjct: 267 HLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVK 326
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
Q + G+ ++A+T V SWG G +G+LGHG+ S P+
Sbjct: 327 FPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGE---------SMDRNLPK 377
Query: 231 LIKEL 235
+I+ L
Sbjct: 378 IIEVL 382
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+SG ++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 12 EVSGPIRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGD--AEDRPTPTQLSTLDG 69
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
+ G + + + + +V SWG G GRLGHG S + +TP+ IK L
Sbjct: 70 LDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDL---------FTPQPIKAL 120
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
+K++ A G H + +G V +G ++ + P I + V
Sbjct: 121 HSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMV 180
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT +T GELY WG G LG+G
Sbjct: 181 AAGAEHTAAVTEDGELYGWGWGRYGNLGLG 210
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S +V CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P CS F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ P ++ L + +V +S G H+ A+ G++Y WG +GQLGL
Sbjct: 64 GQLGHEKS---RKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P++IK L G+ AAG HS + +G V+ +G ++ + N
Sbjct: 177 -----KQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR RP A + ++ ++CG AHTL L + G VYA G GQL
Sbjct: 59 GCNDLGQLG--HEKSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y+ P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G V WG G+LG E+
Sbjct: 177 KQAS-PQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ + G H+A + + G V+ FG ++ H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPR 286
Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L ++ CG HT + S G +Y++G NG LG+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V IS G H++A+T +G ++ +G GQLG A
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTA 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSN 334
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + ++CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG+G
Sbjct: 274 LG-HNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTT 332
Query: 161 AAKVIPIPTK 170
+ + P P K
Sbjct: 333 SNRKSPFPVK 342
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 138/284 (48%), Gaps = 26/284 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT +E+ VY+ G + F
Sbjct: 40 WGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGCDLFT 99
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
I +L LRI QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 100 PQPIK-----ALHGLRIK-------QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTE 147
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P K++ G+ K A G E + AVT G++ WG G G LG G + L
Sbjct: 148 DSL--VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL--- 202
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + +EGVK+ A G+ H+ + +G +Y +G ++ + P
Sbjct: 203 ------VPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTP 256
Query: 282 SLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + E+ G HT LTS G+LY WG N+ G +G+G
Sbjct: 257 HKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 300
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P S E + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 185 WGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQ 244
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L++ ++ +IS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 245 LGHGDFEDH-LTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNV 303
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ K + + G+ ++AVT V SWG G +G+LGHG+
Sbjct: 304 DHCSPVQVKFPHEQKVV--HISCGWRHTLAVTERQNVFSWGRGTNGQLGHGE-------- 353
Query: 222 RSTSEYTPRLIKEL 235
S P++I+ L
Sbjct: 354 -SIDRNIPKMIEVL 366
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 26/243 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ E P AF+ S+K +A G HT +TE G +Y G +G
Sbjct: 133 WGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGN 192
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + L P ++S ++ ++V+++ G+ H+ +++ G LY +G + GQLG G
Sbjct: 193 LGLGDR-NDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFE 251
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P K+E L + + G+ ++A+T GK+ WG G++G G
Sbjct: 252 DHL--TPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD-------- 301
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAVD 268
+ +P +K KV + G+ H+ + E V+ +G DR +
Sbjct: 302 -NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIP 360
Query: 269 KML 271
KM+
Sbjct: 361 KMI 363
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 105/247 (42%), Gaps = 50/247 (20%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP----------- 166
+S + V+ IS G HS A+ + WG+ +GQLG G ++ P
Sbjct: 11 VSAPVRRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEV 70
Query: 167 ----------------------------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
P ++ L G+ KQ A G +AVT G+V
Sbjct: 71 VSVTCGADHTTAYSESFTQVYSWGCDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEV 130
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG +G+LG G L P+ I+ +GV VK+ AAG H+A + E+G
Sbjct: 131 QSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGE 181
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
+Y +G + + N P +S + + +V CG HT ++S G LYT+G ++
Sbjct: 182 LYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSK 241
Query: 317 NGCLGIG 323
G LG G
Sbjct: 242 YGQLGHG 248
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A +++ + ++ G HT+ LT G +Y G N FGQ+G+ +
Sbjct: 242 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD 301
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ + P+++ +++VV IS G+ H+ A+T ++ WG+ +NGQLG G+ +
Sbjct: 302 NVDH-CSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDR--N 358
Query: 167 IPTKVECLS 175
IP +E LS
Sbjct: 359 IPKMIEVLS 367
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 145/285 (50%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P C F ++ + CG HT FL E G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLN- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS + Q A G+ S+A++ GG + SWG G+LG G
Sbjct: 120 NFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ S P+ ++ L+G+ AAG HS + +G V+ +G ++ + N
Sbjct: 173 -MTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRC 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+ V+ CG HT LT G ++T+G+ G LG
Sbjct: 232 FPALLKAL-RSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG +S P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L + + V+ IS G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLG 210
+V P KV L G Q A G + ++A T GK+ S+G GG+G+LG
Sbjct: 281 HEV--NPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 23/232 (9%)
Query: 100 FGQLG---ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+GQLG I E I +EP + K V + G H++ + DG +Y G N GQL
Sbjct: 9 YGQLGLGGIDEEI--VVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLGQL 66
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K K P +V L + G ++A+ G+V SWG G G+LG
Sbjct: 67 GHEKSRKK----PEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFE 122
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQE 274
+ PR IK L V+V A G+ HS + + G ++ +G ++ L
Sbjct: 123 ECI--------RVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMT 174
Query: 275 GNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G P + L P+++ + GG H+ LT G ++ WG N+ G LG+
Sbjct: 175 GQSISVPQHLQSLQGIPFAQ-IAAGGAHSFALTLSGAVFGWGRNKFGQLGLN 225
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 18/182 (9%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K E G + G + + G V + G
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LGH + S P + L+ + + G H+ +++ G+V+ +G
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGS 112
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
D + F+E R P I L + +V CG +H+ L+ GG +++WG N G LG
Sbjct: 113 DGQLGLNNFEEC--IRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLG 170
Query: 322 IG 323
+G
Sbjct: 171 LG 172
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R P + A + ++CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L VV QI+ G H+ A T G++ +G NGQLG
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRST 332
Query: 161 AAKVIPIPTK 170
+ P P K
Sbjct: 333 CNRKSPAPVK 342
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S +V CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 147/297 (49%), Gaps = 20/297 (6%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
++ L + WG G+ G+LG G E R P V ++F+ + ++ CG HT+ ++
Sbjct: 34 AALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM 93
Query: 92 -VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
+Y+ G DFG+LG N P I L+ ++ QI+ G H +T +G+++ WG+
Sbjct: 94 QLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR 152
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N NGQLGLG + +P K++ G+ K A G E + A+T GG + WG G G
Sbjct: 153 NQNGQLGLGNNQDSL--LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN- 209
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
LG P + +EG K+ + A G+ HS + +G +Y +G +
Sbjct: 210 --------LGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQ 261
Query: 270 M---LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGI 322
+ FQ+ R+ + +P S+ + GG+ HT + G+LY WG N+ G +G+
Sbjct: 262 LGHGDFQDHLVPRKLEALKDVPISQ--ISGGWRHTMAVAEDGKLYGWGWNKFGQVGV 316
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V++ G N GQ
Sbjct: 98 WGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQ 157
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I + V+ I+ G H++AIT G+LY WG G LGL +
Sbjct: 158 LGLGNNQD-SLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRD 216
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P KV + G A G+ SV+V+ G + ++G G+LGHG L
Sbjct: 217 DR--SVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHL--- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
PR ++ L+ V + + G+ H+ + E+G++Y +G ++ ++ P
Sbjct: 272 ------VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSP 325
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ P +++V CG HT LT +++WG +G LG G
Sbjct: 326 VEVN-FPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHG 369
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 13/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ + P AFE +K +A G HT +TE G +Y G +G
Sbjct: 150 WGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+S+ S+ P ++S ++ E +V ++ G+ HS +++ G LY +G + GQLG G
Sbjct: 210 LGLSDRDDRSV-PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P K+E L + Q + G+ ++AV GK+ WG G+ +G
Sbjct: 269 DHL--VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQ---------VGVE 317
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ +P + + K+ A G+ H+ + EN ++ +G A ++ E P
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 282 SLISKL 287
+I L
Sbjct: 378 KMIDAL 383
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ V+ IS G +HS+A+ + WG+ +GQLG G + P+PT +
Sbjct: 20 EQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDR--PVPTVLTSFDVPRVTS 77
Query: 182 AALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
G + ++A + ++ SWG G GRLGHG S + + P+ I L+G+K+
Sbjct: 78 VICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDV---------FNPQPIVALQGMKI 128
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC----- 295
K A G H + NG+V+ +G ++ GN+ + SL+ + + E VC
Sbjct: 129 KQIACGDSHCLTVTFNGQVHSWGRNQNGQLGL--GNN--QDSLLPQKIKAFEGVCVKMIA 184
Query: 296 -GGYHTCVLTSGGELYTWGSNENGCLGI 322
G HT +T GG+LY WG G LG+
Sbjct: 185 AGAEHTTAITEGGDLYGWGWGRYGNLGL 212
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G + P A + + ++ G HT+ + E G +Y G N FGQ+G+ +
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ + P+ ++ ++++VQ++ G+ H+ A+T + ++ WG+ ++GQLG G+ + P
Sbjct: 319 NVDH-CSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 167 IPTKVECLSGIFTKQ 181
L G KQ
Sbjct: 378 KMIDALSLDGSACKQ 392
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
rubripes]
Length = 3883
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 23/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + P + SAF+ + + L +CG H++ LTETG V++ G DF
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF 3134
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ ++VVQ++ G+ HS+ +T DG+L+ +G +G+LG
Sbjct: 3135 GKLGHGNN-ERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRS 3193
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K++P +V L G Q + G ++ ++ G V ++G G G+LG G
Sbjct: 3194 TSNKMLP--ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS----- 3246
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
ST++Y P+ +++L +K G S + +G VY FG + D ML
Sbjct: 3247 ----STAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNR 3302
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N PSL + E++ G H L+S G++Y WG N G LG+G
Sbjct: 3303 SNPQVVPSLEGL--FIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLG 3349
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 141/288 (48%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLGLG ++ P ++K ++ HTL +T G V++ G ++
Sbjct: 437 GKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEY 496
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG N P I G K VV S GY HS+A+T DGELY WG+ G+LG
Sbjct: 497 GKLG-HGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHS 555
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ +PT V+ +SG+ Q A G ++AV G+ V S+G G +G+LGHG + +
Sbjct: 556 DSQSRN--MPTLVKDISGV--GQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRV 611
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L G ++ AG S + G+V+ +G + E
Sbjct: 612 ---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT- 661
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ RP + L ++ ++ CG H L+ E+Y WG+N G G G
Sbjct: 662 SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQG 709
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 18/249 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G+ E + RP A + + LACG H+ +T G ++ G + G+
Sbjct: 3129 WGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGR 3188
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG + + P R++ L+ V Q+S G +H+ +++DG ++ +G G+LG G
Sbjct: 3189 LG-QRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3247
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KVE L K+ G + SV V G V ++G + ++G
Sbjct: 3248 TAKY--YPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFG-----------QERLIGL 3294
Query: 221 LRST--SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S + P+++ LEG+ ++ A G H + G VY +G + ++ N
Sbjct: 3295 PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPV 3354
Query: 279 RRPSLISKL 287
+ P+LI+ L
Sbjct: 3355 KEPTLITAL 3363
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 22/230 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+G+YG+LG G+ ++ P + F K + A A G H+ +T+ G +Y G DF
Sbjct: 491 WGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASA-GYRHSAAVTKDGELYTWGEGDF 549
Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
G+LG S++ ++ L ISG V Q++ G H+ A+ DG ++ +G NG+LG
Sbjct: 550 GRLGHSDSQSRNMPTLVKDISG----VGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGH 605
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G ++ G + S+A+T G+V +WG G LG G
Sbjct: 606 GD--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS--- 658
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
T+ PR +++L K+ + G H + VY +G+ +
Sbjct: 659 -----ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 703
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 18/237 (7%)
Query: 92 VYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
VY G N QL G E I L P G + I G + + +++ DG + GK
Sbjct: 383 VYVWGSNSSHQLAEGTLEKI---LLPKLTQGFS-DAQTIEAGQYCTFSVSTDGSVKACGK 438
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGAGGSGR 208
S G+LGLG + +P +E I ++ G + ++A+T G+V SWG G G+
Sbjct: 439 GSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGK 498
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAV 267
LGHG S ++ P++I+ K+ + A+AG+ HSA + ++G +Y +G+
Sbjct: 499 LGHG---------NSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDF 549
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIG 323
++ + P+L+ + +V CG HT + G ++++G +NG LG G
Sbjct: 550 GRLGHSDSQSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHG 606
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 143 ELYMWGKNSNGQL-GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++Y+WG GQL G G + +PT LS T+Q G S + G V +
Sbjct: 3021 DVYLWGNGRYGQLAGTGTN----LTVPTLAPSLSQ--TQQVVCGQNCSFLIQSNGVVTAV 3074
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGR 258
G G GRLG G + Y P +I +G V + + G HS + E G
Sbjct: 3075 GEGQYGRLGQGNSDDL---------YVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGE 3125
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
V+ +GD K+ RRP I L E+VV CG H+ V+T+ G+L+T+GS
Sbjct: 3126 VFSWGDGDFGKLGHGNNERQRRPKQIEAL-QGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184
Query: 316 ENGCLG 321
E+G LG
Sbjct: 3185 ESGRLG 3190
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G +RP V A ++ + G +L LT G V+A G
Sbjct: 595 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 654
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G SE SL P + L +++ IS G H A++ + E+Y WG N+ GQ G G +
Sbjct: 655 CGSSETT--SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 712
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSW 201
I P KV L G+ +Q G S+ AV ++++W
Sbjct: 713 TP-ITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 754
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG +SR P + + +ACG +HT+ + + G V++ G D G
Sbjct: 544 WGEGDFGRLGHSDSQSRNMPTLVKDIS--GVGQVACGSSHTIAVAQDGRTVWSFGGGDNG 601
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P I L ++ ++ G S A+T G+++ WG S LG G
Sbjct: 602 KLGHGDT-NRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS 658
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE LS + G +A++ +V +WG G+ G G S+ +
Sbjct: 659 ETTSL-RPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT- 716
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
P+ + LEGV ++ AG HS
Sbjct: 717 -------RPKKVLGLEGVSIQQITAGTSHS 739
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 147/297 (49%), Gaps = 20/297 (6%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
++ L + WG G+ G+LG G E R P V ++F+ + ++ CG HT+ ++
Sbjct: 34 AALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM 93
Query: 92 -VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
+Y+ G DFG+LG N P I L+ ++ QI+ G H +T +G+++ WG+
Sbjct: 94 QLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR 152
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N NGQLGLG + +P K++ G+ K A G E + A+T GG + WG G G
Sbjct: 153 NQNGQLGLGNNQDSL--LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN- 209
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
LG P + +EG K+ + A G+ HS + +G +Y +G +
Sbjct: 210 --------LGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQ 261
Query: 270 M---LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGI 322
+ FQ+ R+ + +P S+ + GG+ HT + G+LY WG N+ G +G+
Sbjct: 262 LGHGDFQDHLVPRKLEALKDVPISQ--ISGGWRHTMAVAEDGKLYGWGWNKFGQVGV 316
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 17/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V++ G N GQ
Sbjct: 98 WGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQ 157
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I + V+ I+ G H++AIT G+LY WG G LGL +
Sbjct: 158 LGLGNNQD-SLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRD 216
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P KV + G A G+ SV+V+ G + ++G G+LGHG L
Sbjct: 217 DR--SVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHL--- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
PR ++ L+ V + + G+ H+ + E+G++Y +G ++ ++ P
Sbjct: 272 ------VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSP 325
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ P +++V CG HT LT +++WG +G LG G
Sbjct: 326 VEVN-FPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHG 369
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 13/246 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ + P AFE +K +A G HT +TE G +Y G +G
Sbjct: 150 WGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+S+ S+ P ++S ++ E +V ++ G+ HS +++ G LY +G + GQLG G
Sbjct: 210 LGLSDRDDRSV-PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P K+E L + Q + G+ ++AV GK+ WG G+ +G
Sbjct: 269 DHL--VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQ---------VGVE 317
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ +P + + K+ A G+ H+ + EN ++ +G A ++ E P
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 282 SLISKL 287
+I L
Sbjct: 378 KMIDAL 383
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ V+ IS G +HS+A+ + WG+ +GQLG G + P+PT +
Sbjct: 20 EQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDR--PVPTVLTSFDVPRVTS 77
Query: 182 AALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
G + ++A + ++ SWG G GRLGHG S + + P+ I L+G+K+
Sbjct: 78 VICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDV---------FNPQPIVALQGMKI 128
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC----- 295
K A G H + NG+V+ +G ++ GN+ + SL+ + + E VC
Sbjct: 129 KQIACGDSHCLTVTFNGQVHSWGRNQNGQLGL--GNN--QDSLLPQKIKAFEGVCVKMIA 184
Query: 296 -GGYHTCVLTSGGELYTWGSNENGCLGI 322
G HT +T GG+LY WG G LG+
Sbjct: 185 AGAEHTTAITEGGDLYGWGWGRYGNLGL 212
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G + P A + + ++ G HT+ + E G +Y G N FGQ+G+ +
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ + P+ ++ ++++VQ++ G+ H+ A+T + ++ WG+ ++GQLG G+ + P
Sbjct: 319 NVDH-CSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377
Query: 167 IPTKVECLSGIFTKQ 181
L G KQ
Sbjct: 378 KMIDALSLDGSACKQ 392
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+ S +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 141/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S + CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G QAA G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q + G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S +V CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 155/298 (52%), Gaps = 31/298 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4054 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4113
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4114 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4172
Query: 160 KAAKVIPIPTKVECLSG----------IFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGR 208
+ K +P +V L G +F Q A G ++AV+ G ++ ++G G G+
Sbjct: 4173 TSNK--KLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGK 4230
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAV 267
LG G ST++ +P+ + L G+ +K A G S + ++G VY FG DR +
Sbjct: 4231 LGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLI 4281
Query: 268 DKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ NH RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4282 GLPEGRARNH-NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 4338
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 426 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 485 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 544
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 545 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 600
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 601 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 650
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 651 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 698
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 24/257 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4108 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4167
Query: 103 LGISENIGYSLEPLRISGLKKEVV-----------QISTGYHHSSAITVDGEL-YMWGKN 150
LG+ L P R++ L+ + Q++ G +H+ A++ DG + + +G
Sbjct: 4168 LGLGNTSNKKL-PERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDG 4226
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LGLG AK P KV+ L GI K+ A G + SVA+T G V ++G L
Sbjct: 4227 DYGKLGLGNSTAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLP 4284
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G R+ + P+ I L GV ++ A G H+ + G VY +G + ++
Sbjct: 4285 EG---------RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4335
Query: 271 LFQEGNHARRPSLISKL 287
NH R P+L++ L
Sbjct: 4336 GLGHTNHVREPTLVTVL 4352
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 83 TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
T ++ET VY G N QL G E I L+P +++ + I G + + I+
Sbjct: 363 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 418
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
DG + GK S G+LGLG + E I ++ G + ++A T G+V
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G
Sbjct: 479 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 529
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
+Y +G+ ++ + N P+L+ + EV CG HT L+ G ++++G +N
Sbjct: 530 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 589
Query: 318 GCLGIG 323
G LG G
Sbjct: 590 GKLGHG 595
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 480 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 539
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 540 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 596
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 597 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 651
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 652 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 692
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 641
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 642 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 701
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 702 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3975 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4030
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4031 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4080
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4081 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4139
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4140 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4171
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 533 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 590
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 591 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 647
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 648 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 699
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 700 --STGPITKPKKVSGLDGIAIQQISAGTSHS 728
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S +V CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S +V CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+ S +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 141/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 156/297 (52%), Gaps = 30/297 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4038 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4097
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4098 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4156
Query: 160 KAAKVIPIPTKVECLSGIFTKQA---------ALGFEQSVAVTGGGKVL-SWGAGGSGRL 209
+ K +P +V L G QA A G ++AV+ G ++ ++G G G+L
Sbjct: 4157 TSNK--KLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKL 4214
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVD 268
G G ST++ +P+ + L G+ +K A G S + ++G+VY FG DR +
Sbjct: 4215 GLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIG 4265
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ NH RP + L E+V G HT LTS G++Y WGSN G LG+G
Sbjct: 4266 LPEGRARNH-NRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLG 4321
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 23/256 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4092 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4151
Query: 103 LGISENIGYSLEPLRISGL----------KKEVVQISTGYHHSSAITVDGEL-YMWGKNS 151
LG+ L P R++ L K + ++ G +H+ A++ DG + + +G
Sbjct: 4152 LGLGNTSNKKL-PERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGD 4210
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G+LGLG AK P KV+ L GI K+ A G + SVA+T G+V ++G L
Sbjct: 4211 YGKLGLGNSTAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPE 4268
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G R+ + P+ + L GV ++ A G H+ + G +Y +G + ++
Sbjct: 4269 G---------RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLG 4319
Query: 272 FQEGNHARRPSLISKL 287
NH R P+L++ L
Sbjct: 4320 LGHTNHVREPTLVTVL 4335
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+++T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3959 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4014
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4015 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4064
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4065 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4123
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4124 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4155
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQVSAGTSHSLAWTALPRDRQVVAW 745
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S ++T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQVSAGTSHS 730
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V SWG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCN 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L+GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 148/287 (51%), Gaps = 20/287 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ACG HTL +E+ +Y+ G DFG
Sbjct: 38 WGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N L P I L+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 98 RLG-HGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNT 156
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 157 EDSL--VPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN----- 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNH 277
+ P + ++ K+ + A G+ H+ + +G +Y +G ++ F++
Sbjct: 210 ----DRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLV 265
Query: 278 ARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
++ +S S+ V GG+ H+ LTS G L+ WG N+ G +G+G
Sbjct: 266 PQKLQALSDKLISQ--VSGGWRHSMALTSTGLLFGWGWNKFGQVGVG 310
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 21/287 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 91 WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I K ++ ++ G HS AIT +GELY WG G LGLG +
Sbjct: 151 LGLG-NTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN 209
Query: 162 AKVIPIP-TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
+ P + V+C + A G+ +++V+ G + ++G G+LGHG E S++
Sbjct: 210 DRWNPEKVSSVDCDKMVMV---ACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLV- 265
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ ++ L + + G+ HS + G ++ +G ++ +
Sbjct: 266 ---------PQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHC 316
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + K P + VV CG HT +T +++WG NG LG G
Sbjct: 317 SPVQV-KFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHG 362
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG RW P S+ + + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 195 WGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQ 254
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N SL P ++ L +++ Q+S G+ HS A+T G L+ WG N GQ+G+G
Sbjct: 255 LG-HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNL 313
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ K + Q + G+ ++AVT V SWG G +G+LGHG
Sbjct: 314 DHCSPVQVKFPQDQRVV--QISCGWRHTIAVTEKENVFSWGRGTNGQLGHGD-------- 363
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+ +P++I E + V +A + S+ D
Sbjct: 364 -TIDRNSPKII---EALSVDGSAGPHIESSNTD 392
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 124/252 (49%), Gaps = 16/252 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P ++S L + + I+ G H
Sbjct: 19 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL-PTQLSALDAQHIDSIACGADH 77
Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + ELY WG G+LG G + +IP P + L G+ KQ A G +AVT
Sbjct: 78 TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 135
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P+ I+ +GV +K+ AAG HS I
Sbjct: 136 MEGEVQSWGRNQNGQLGLGNTEDSL---------VPQKIQAFKGVPIKMVAAGAEHSVAI 186
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
ENG +Y +G + + N P +S + + V+ CG HT ++S G +YT
Sbjct: 187 TENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYT 246
Query: 312 WGSNENGCLGIG 323
+G ++ G LG G
Sbjct: 247 YGWSKYGQLGHG 258
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 13 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 73 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 128
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 129 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 181
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 182 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 240
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 241 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 284
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 68 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 125
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 126 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 185
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 186 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 237
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 238 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 295
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S +V CG HT + S G +Y++G NG LG G
Sbjct: 296 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 339
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 170 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 229
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 230 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 289
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 290 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 343
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 223 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 282
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 283 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 341
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 342 SNRKSPFTVK 351
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 147/288 (51%), Gaps = 20/288 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTET-GCVYATGLND 99
WG G+ G+LG G E R P V S F+ + + ++ CG HT +E VY+ G D
Sbjct: 46 WGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGD 105
Query: 100 FGQLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
FG+LG + ++ +P++ + G+K + QI+ G H A+T+ GE+ WG+N NGQLGL
Sbjct: 106 FGRLGHGNSSDVFTPQPVKALQGIK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGL 163
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + +P K++ G+ K A G E + AVT G + WG G G LG G +
Sbjct: 164 GTTEDSL--LPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDR 221
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L P + +EG K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 222 L---------VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFED 272
Query: 278 ARRPSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + L S + GG+ HT LTS G+LY WG N+ G +G+G
Sbjct: 273 HLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 320
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 138/285 (48%), Gaps = 17/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 101 WGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQ 160
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + V+ I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 161 LGLG-TTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 219
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV + G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 220 DRL--VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL--- 274
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + + G+ H+ + +G++Y +G ++ + + P
Sbjct: 275 ------VPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFP 328
Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ K P + +V CG HT T +++WG +G LG G
Sbjct: 329 VQV-KFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHG 372
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 19 KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
K+ S G+C + I++ + A WG G YG LGLG R P S+ E
Sbjct: 174 KIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGE 233
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
+ +ACG HT+ ++ +G +Y G + +GQLG + + L P ++ LK + QIS
Sbjct: 234 KMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDSSISQISG 292
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G+ H+ A+T DG+LY WG N GQ+G+G P+ K + Q A G+ ++
Sbjct: 293 GWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKV--AQVACGWRHTL 350
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQ 213
A T V SWG G SG+LGHG+
Sbjct: 351 AFTEKKNVFSWGRGTSGQLGHGE 373
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 106/255 (41%), Gaps = 66/255 (25%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP------------------ 166
VV +S G HS A+ L WG+ +GQLG G +++P
Sbjct: 24 VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVIC 83
Query: 167 -----------------------------------IPTKVECLSGIFTKQAALGFEQSVA 191
P V+ L GI KQ A G +A
Sbjct: 84 GADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLA 143
Query: 192 VTGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
VT G+V SWG +G+LG G E S+L P+ I+ EGV VK+ AAG H+
Sbjct: 144 VTMAGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQSFEGVCVKMIAAGAEHT 193
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGE 308
A + E+G +Y +G + + N P +S + + V+ CG HT ++S G
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGS 253
Query: 309 LYTWGSNENGCLGIG 323
LYT+G ++ G LG G
Sbjct: 254 LYTYGWSKYGQLGHG 268
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + S+ ++ G HT+ LT G +Y G N FGQ+G+ +
Sbjct: 262 YGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD 321
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
+ P+++ ++V Q++ G+ H+ A T ++ WG+ ++GQLG G+ + P
Sbjct: 322 TDDHCF-PVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKP 380
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
+ G K+ E S AV KV
Sbjct: 381 VMIDALSPDGPGCKK----LEPSTAVPFAAKV 408
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +++GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ L+ I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L+ S +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 141/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y P I L ++VQI+ GY+HS A++ E++ WG+N +GQLGLG +
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VY+ GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + Y P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S +V CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + + G +V V G V + G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 139/288 (48%), Gaps = 17/288 (5%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLND 99
A WG G+ G+LG G + P +A + A+ CG +T+ + + G +Y+ G D
Sbjct: 32 ASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGD 91
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGL 157
FG+LG E G P I+ + V +++ G H+ +T DG LY +G+N NGQLGL
Sbjct: 92 FGRLGHGE-CGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGL 150
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P V L G A G E S+A T G V SWG G G LG G
Sbjct: 151 GHTNDCL--SPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGD---- 204
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S YTP + L+GV V G+ HSA + + GRV+ FG ++ +
Sbjct: 205 -----SQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVD 259
Query: 278 ARRPSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
RP L++ L + V GG+ HT S G LY WG N+ G LG+G
Sbjct: 260 HTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLG 307
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 130/297 (43%), Gaps = 28/297 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
WG GD+GRLG G + P + F + +ACG HTL +T+ G +Y G N G
Sbjct: 87 WGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNG 146
Query: 102 QLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + L P ++ L+ E V ++ G HS A T G ++ WG G LG G
Sbjct: 147 QLGLG-HTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDS 205
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ PT+V L G+ G+ S VT G+V ++G G+LGHG
Sbjct: 206 QDRY--TPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDH------ 257
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P L+ L+ +V A G+ H+ D G +Y +G ++ +
Sbjct: 258 ---VDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAA 314
Query: 281 PSLISKLPYSEE--------------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ ++ + + CG HT +T GE+Y+WG NG LG G
Sbjct: 315 PTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHG 371
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LG G + R+ P + ++ ++ CG H+ +T+ G V+ G + +GQ
Sbjct: 192 WGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQ 251
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +++ ++ P ++GL+ V ++ G+ H+ A +G LY WG N GQLGLG
Sbjct: 252 LGHGDHVDHT-RPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSE 310
Query: 162 AKVIPIPTK-------VECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ P P ++ AL G+ +VAVT G+V SWG G +G+LGH
Sbjct: 311 DRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGH 370
Query: 212 GQESSI 217
G E +
Sbjct: 371 GAEQDL 376
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 15/206 (7%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ V+ +S G HS A+ G + WG+ +GQLG G+ A PT + L+
Sbjct: 9 EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQ--ADQCTSPTCIAALTDAGVDA 66
Query: 182 AALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
G E +VAV G++ SWG G GRLGHG+ + + PR I G V
Sbjct: 67 VVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDV---------FVPRPIAFFSGRPV 117
Query: 241 KIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGG 297
A G H+ + + +G +Y FG ++ N P L++ L V CG
Sbjct: 118 ARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGS 177
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
H+ T G +++WG G LG G
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDG 203
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 143/297 (48%), Gaps = 40/297 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT + VY+ G DFG
Sbjct: 32 WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFG 91
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N L P I L ++ QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 92 RLG-HGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTT 150
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G++ WG G G LG G + L
Sbjct: 151 EDSL--VPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRL-- 206
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV 267
P+ + ++G K+ + A G+ H+ + G +Y +G DR V
Sbjct: 207 -------VPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLV 259
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
L A R IS+ + GG+ HT LT+ G+LY WG N+ G +G G
Sbjct: 260 PHRL-----EALRGDNISQ-------ISGGWRHTMALTTDGKLYGWGWNKFGQVGAG 304
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 137/285 (48%), Gaps = 17/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ P A ++ +ACG +H L +T G V + G N GQ
Sbjct: 85 WGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQ 144
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + + ++ G H++A+T DGEL+ WG G LGLG +
Sbjct: 145 LGLG-TTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRN 203
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV + G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 204 DRL--VPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRL--- 258
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L G + + G+ H+ + +G++Y +G ++ + P
Sbjct: 259 ------VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSP 312
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
I K P ++V+ CG HT +T +++WG NG LG G
Sbjct: 313 IQI-KFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHG 356
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P S+ + + +ACG HT+ ++ G +Y G + +GQ
Sbjct: 189 WGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQ 248
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + L P R+ L+ + QIS G+ H+ A+T DG+LY WG N GQ+G G
Sbjct: 249 LGHGD-FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 307
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
PI K + Q + G+ ++AVT V SWG G +G+LGHG+
Sbjct: 308 DHCSPIQIKFPQDQKVI--QISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGE-------- 357
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYI 261
S TP + LE + V + + S+ ID +G+ ++
Sbjct: 358 -SVDRNTPMI---LEALSVDGCSGQQIESSNIDPSSGKTWV 394
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ V+ IS G HS A+ + WG+ +GQLG G ++ PT++ L G
Sbjct: 8 RRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL--SPTQLSALDGHEIVSV 65
Query: 183 ALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + + A + +V SWG G GRLGHG S +L TP+ IK L G+K++
Sbjct: 66 TCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLL---------TPKPIKALHGLKIR 116
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
A G H + G V +G ++ + P I + V G H
Sbjct: 117 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEH 176
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T +T GEL+ WG G LG+G
Sbjct: 177 TAAVTEDGELFGWGWGRYGNLGLG 200
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VY+ GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + Y P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S +V CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + + G +V V G V + G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VY+ GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + Y P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S +V CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + + G +V V G V + G
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 148/288 (51%), Gaps = 22/288 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G + R P + S E + ++ CG HT+ +E+ VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHTIAYSESHTDVYSWGWGDFG 97
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + ++ +P+R + GLK + QI+ G H A+T++G++ WG+N NGQLGLG
Sbjct: 98 RLGHGNSSDLFTPQPIRQLHGLK--IKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGT 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ G+ K A G E + AVT G++ WG G G LG G L
Sbjct: 156 TEDSL--VPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRL- 212
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P + G K+ + A G+ H+ + +G +Y +G ++ G++A
Sbjct: 213 --------VPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQL--GHGDYAD 262
Query: 280 R--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + ++ G HT +TS G+LY WG N+ G +G+G
Sbjct: 263 HLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVG 310
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 143/286 (50%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P +K +ACG +H L +T G V + G N GQ
Sbjct: 91 WGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQ 150
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I + ++ ++ G H++A+T DGELY WG G LGLG +
Sbjct: 151 LGLG-TTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRK 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV G A G+ +++V+ G + ++G G+LGHG + L
Sbjct: 210 DRL--VPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHL--- 264
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+G + + G+ H+ + +G++Y +G ++ G++ R
Sbjct: 265 ------IPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV--GDNVDRS 316
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + KLP ++V+ CG HT +T +++WG NG LG G
Sbjct: 317 SPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNG 362
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 17/222 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG + R P S + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 195 WGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQ 254
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L+ + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 255 LGHGDYADH-LIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNV 313
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ K+ + + G+ ++AVT V SWG G +G+LG+G+
Sbjct: 314 DRSSPVQVKLPLEQKVIL--ISCGWRHTLAVTERQNVFSWGRGTNGQLGNGE-------- 363
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYIF 262
T P +IK L V + + S+ +D +G+ ++
Sbjct: 364 -CTDRNVPVIIKAL---SVDGSCGQHIESSMVDSSSGKTWVL 401
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ + V+ IS G HS A+ + WG+ +GQLG G ++ PT + L G
Sbjct: 8 EVTAPVRRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRL--SPTILSTLEG 65
Query: 177 IFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
+ G + ++A + V SWG G GRLGHG S + +TP+ I++L
Sbjct: 66 LEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDL---------FTPQPIRQL 116
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEE 292
G+K+K A G H + G+V +G ++ + P I +P +
Sbjct: 117 HGLKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPI-KM 175
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V G HT +T GELY WG G LG+G
Sbjct: 176 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLG 206
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 147/287 (51%), Gaps = 20/287 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ACG HTL +E+ +Y+ G DFG
Sbjct: 37 WGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFG 96
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N L P I L+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 97 RLG-HGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTS 155
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 156 EDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN----- 208
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNH 277
+ P + ++ K+ + A G+ H+ + G +Y +G ++ F++
Sbjct: 209 ----DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264
Query: 278 ARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
++ +S S+ V GG+ H+ LTS G LY WG N+ G +G+G
Sbjct: 265 PQKLQALSDKLISQ--VSGGWRHSMALTSTGLLYGWGWNKFGQVGVG 309
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 144/289 (49%), Gaps = 25/289 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 90 WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 149
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+ SE+ SL P +I + ++ ++ G HS AIT +GELY WG G LGLG
Sbjct: 150 LGLGTSED---SLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGD 206
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSIL 218
+ + IP KV + A G+ +++V+ G + ++G G+LGHG E S++
Sbjct: 207 RNDRW--IPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ ++ L + + G+ HS + G +Y +G ++ G++
Sbjct: 265 ----------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV--GDNV 312
Query: 279 RRPSLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S + K P+ ++VV CG HT +T +++WG NG LG G
Sbjct: 313 DRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHG 361
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG RW P S+ + + +ACG HT+ ++ G +Y G + +GQ
Sbjct: 194 WGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQ 253
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N SL P ++ L +++ Q+S G+ HS A+T G LY WG N GQ+G+G
Sbjct: 254 LG-HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNV 312
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ K + Q + G+ ++AVT V SWG G +G+LGHG
Sbjct: 313 DRCSPVQVKFPHDQKVV--QISCGWRHTIAVTEKENVFSWGRGTNGQLGHGD-------- 362
Query: 222 RSTSEYTPRLIKEL 235
+ +P++I+ L
Sbjct: 363 -TVDRNSPKIIEAL 375
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 124/252 (49%), Gaps = 16/252 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P +S L +++ I+ G H
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT-DDRLLPTHLSALDAQQIDSIACGADH 76
Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + ELY WG G+LG G + +IP P + L G+ KQ A G +AVT
Sbjct: 77 TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 134
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G S P+ I+ +GV +K+ AAG HS I
Sbjct: 135 MEGEVQSWGRNQNGQLGLGT---------SEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 185
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
ENG +Y +G + + N P +S + + V+ CG HT ++S G LYT
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245
Query: 312 WGSNENGCLGIG 323
+G ++ G LG G
Sbjct: 246 YGWSKYGQLGHG 257
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G+G R PV + ++CG HT+ +TE V++ G GQ
Sbjct: 298 WGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQ 357
Query: 103 LG----ISENIGYSLEPLRISG 120
LG + N +E L + G
Sbjct: 358 LGHGDTVDRNSPKIIEALSVDG 379
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 150/289 (51%), Gaps = 23/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + P + SAF+ + + L +CG H++ LTETG V++ G DF
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF 3795
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ ++VVQ++ G+ HS+ +T DG+L+ +G +G+LG
Sbjct: 3796 GKLGHGNN-ERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRS 3854
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
+ K+ P +V L G Q + G ++ ++ G V ++G G G+LG G
Sbjct: 3855 TSNKMQP--ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS----- 3907
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
ST++Y P+ +++L +K G S + +G VY FG + D ML
Sbjct: 3908 ----STAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNR 3963
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N PSL + E++ G H L+S G++Y WG N G LG+G
Sbjct: 3964 SNPQVVPSLEGL--FIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLG 4010
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 25/289 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGA--HTLFLTETGCVYATGLND 99
G G YGRLGLG ++ P E H K + G+ HTL +T G V++ G +
Sbjct: 394 GKGSYGRLGLGDSNNQSMPKKL-VLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGE 452
Query: 100 FGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG N P + G K VV S GY HS+A+T DGELY WG+ G+LG
Sbjct: 453 YGKLG-HGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGH 511
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESS 216
++ PT V+ +SG+ Q A G ++AV G+ + S+G G +G+LGHG +
Sbjct: 512 SDSQSR--NTPTLVKDISGV--GQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNR 567
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ Y P++I+ L G ++ AG S + G+V+ +G + E
Sbjct: 568 V---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT 618
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ RP + L ++ ++ CG H L+ E+Y WG+N G G G
Sbjct: 619 -SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQG 666
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 18/249 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G+ E + RP A + + LACG H+ +T G ++ G + G+
Sbjct: 3790 WGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGR 3849
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG + ++P R++ L+ V Q+S G +H+ +++DG ++ +G G+LG G
Sbjct: 3850 LG-QRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3908
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P KVE L K+ G + SV + G V ++G + ++G
Sbjct: 3909 TAKY--YPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFG-----------QERLIGL 3955
Query: 221 LRST--SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S + P+++ LEG+ ++ A G H + G +Y +G + ++ N
Sbjct: 3956 PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLV 4015
Query: 279 RRPSLISKL 287
+ P+LI+ L
Sbjct: 4016 KEPTLITAL 4024
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 22/230 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+G+YG+LG G+ ++ P + F K + A A G H+ +T G +Y G DF
Sbjct: 448 WGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASA-GYRHSAAVTNDGELYTWGEGDF 506
Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
G+LG S++ + L ISG V Q++ G H+ A+ DG ++ +G NG+LG
Sbjct: 507 GRLGHSDSQSRNTPTLVKDISG----VGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGH 562
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G ++ G + S+A+T G+V +WG G LG G
Sbjct: 563 GD--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS--- 615
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
T+ PR +++L K+ + G H + VY +G+ +
Sbjct: 616 -----ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 660
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%), Gaps = 22/239 (9%)
Query: 92 VYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
VY G N QL G E I L P G + I G + + +++ DG + GK
Sbjct: 340 VYVWGSNSSHQLAEGTLEKI---LLPKLTQGFS-DAQTIEAGQYCTFSVSTDGSVKACGK 395
Query: 150 NSNGQLGLGKKAAKVIPIPTKVEC---LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
S G+LGLG + +P +E + +F+ + + G ++A+T G+V SWG G
Sbjct: 396 GSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDG--HTLAITVDGEVFSWGDGEY 453
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S ++ P++++ K+ + A+AG+ HSA + +G +Y +G+
Sbjct: 454 GKLGHG---------NSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEG 504
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIG 323
++ + P+L+ + +V CG HT + G ++++G +NG LG G
Sbjct: 505 DFGRLGHSDSQSRNTPTLVKDISGVGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHG 563
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 88/187 (47%), Gaps = 23/187 (12%)
Query: 142 GELYMWGKNSNGQL-GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
++Y+WG GQL G G + +PT CLS T+Q G S + G V++
Sbjct: 3681 SDVYLWGNGRYGQLAGTGTN----LTLPTLAPCLSQ--TQQVVCGQNCSFLIQSNGAVMA 3734
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENG 257
G G GRLG G + + P +I +G V + + G HS + E G
Sbjct: 3735 VGEGQYGRLGQGNSDDL---------FVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG 3785
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGS 314
V+ +GD K+ RRP I L E+VV CG H+ V+T+ G+L+T+GS
Sbjct: 3786 EVFSWGDGDFGKLGHGNNERQRRPKQIEAL-QGEDVVQLACGFRHSAVVTADGKLFTFGS 3844
Query: 315 NENGCLG 321
E+G LG
Sbjct: 3845 GESGRLG 3851
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G +RP V A ++ + G +L LT G V+A G
Sbjct: 552 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 611
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G SE SL P + L +++ IS G H A++ + E+Y WG N+ GQ G G +
Sbjct: 612 CGSSETT--SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 669
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSW 201
I P KV L G+ +Q G S+ AV ++++W
Sbjct: 670 TP-ITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 711
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG +SR P + + +ACG +HT+ + + G +++ G D G
Sbjct: 501 WGEGDFGRLGHSDSQSRNTPTLVKDIS--GVGQVACGSSHTIAVAQDGRTMWSFGGGDNG 558
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P I L ++ ++ G S A+T G+++ WG S LG G
Sbjct: 559 KLGHGDT-NRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS 615
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE LS + G +A++ +V +WG G+ G G S+ +
Sbjct: 616 ETTSL-RPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT- 673
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
P+ + LEGV ++ AG HS
Sbjct: 674 -------RPKKVLGLEGVSIQQITAGTSHS 696
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 147/287 (51%), Gaps = 20/287 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + R P SA + + ++ACG HTL +E+ +Y+ G DFG
Sbjct: 37 WGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFG 96
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N L P I L+ + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 97 RLG-HGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTS 155
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ G+ K A G E SVA+T G++ WG G G LG G +
Sbjct: 156 EDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN----- 208
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNH 277
+ P + ++ K+ + A G+ H+ + G +Y +G ++ F++
Sbjct: 209 ----DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264
Query: 278 ARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
++ +S S+ V GG+ H+ LTS G LY WG N+ G +G+G
Sbjct: 265 PQKLQALSDKLISQ--VSGGWRHSMALTSTGLLYGWGWNKFGQVGVG 309
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 144/289 (49%), Gaps = 25/289 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ P A + +K +ACG +H L +T G V + G N GQ
Sbjct: 90 WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 149
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+ SE+ SL P +I + ++ ++ G HS AIT +GELY WG G LGLG
Sbjct: 150 LGLGTSED---SLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGD 206
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSIL 218
+ + IP KV + A G+ +++V+ G + ++G G+LGHG E S++
Sbjct: 207 RNDRW--IPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ ++ L + + G+ HS + G +Y +G ++ G++
Sbjct: 265 ----------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV--GDNV 312
Query: 279 RRPSLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S + K P+ ++VV CG HT +T +++WG NG LG G
Sbjct: 313 DRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHG 361
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG RW P S+ + + +ACG HT+ ++ G +Y G + +GQ
Sbjct: 194 WGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQ 253
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N SL P ++ L +++ Q+S G+ HS A+T G LY WG N GQ+G+G
Sbjct: 254 LG-HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNV 312
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ K + Q + G+ ++AVT V SWG G +G+LGHG
Sbjct: 313 DRCSPVQVKFPHDQKVV--QISCGWRHTIAVTEKENVFSWGRGTNGQLGHGD-------- 362
Query: 222 RSTSEYTPRLIKEL 235
+ +P++I+ L
Sbjct: 363 -TVDRNSPKIIEAL 375
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 124/252 (49%), Gaps = 16/252 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P +S L +++ I+ G H
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT-DDRLLPTHLSALDAQQIDSIACGADH 76
Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A + ELY WG G+LG G + +IP P + L G+ KQ A G +AVT
Sbjct: 77 TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 134
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G S P+ I+ +GV +K+ AAG HS I
Sbjct: 135 MEGEVQSWGRNQNGQLGLGT---------SEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 185
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
ENG +Y +G + + N P +S + + V+ CG HT ++S G LYT
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245
Query: 312 WGSNENGCLGIG 323
+G ++ G LG G
Sbjct: 246 YGWSKYGQLGHG 257
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G+G R PV + ++CG HT+ +TE V++ G GQ
Sbjct: 298 WGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQ 357
Query: 103 LG----ISENIGYSLEPLRISG 120
LG + N +E L + G
Sbjct: 358 LGHGDTVDRNSPKIIEALSVDG 379
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Nomascus leucogenys]
Length = 4855
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 150/287 (52%), Gaps = 24/287 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + R +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4111 GKLGHGNS-----DRQRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNT 4165
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILG 219
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4166 SNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN------ 4217
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHA 278
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4218 ---STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH- 4273
Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4274 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4320
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP + + ++CG H+ +T G ++ G D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPX-----QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4159
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4160 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4218
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4219 TAKSSP--QKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4268
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4269 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4327
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4328 PTLVTGL 4334
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 22/215 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
+GNGDYGRLGLG+ ++ P +A E + + +ACG HTL ++ G V+A G D+G
Sbjct: 4152 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4211
Query: 102 QLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+LG+ + S P +I G+KK ++ G S A+T DG +Y +G++ +G
Sbjct: 4212 KLGLGNSTAKS-SPQKIDVLCGIGIKK----VACGTQFSVALTKDGHVYTFGQDR--LIG 4264
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L + A+ P ++ L+G+ + A+G E ++A+ G V +WG+ G+LG G +
Sbjct: 4265 LPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNH 4324
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ P L+ L+G V+ +AG HSA
Sbjct: 4325 V---------REPTLVTGLQGKNVRQISAGRCHSA 4350
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX------QGEEVV 4131
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4132 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4163
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 138/282 (48%), Gaps = 16/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS PV S ++ +A GG HT LT +G V+ G N+ GQ
Sbjct: 435 WGLNNSGQLGDGSDTDSSTPVAVSGLAS-GVETIAAGGWHTCALTSSGGVWCWGRNNSGQ 493
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I Y + P+ +SGL V I+ G +H+ A+T G ++ WG N +GQLG G
Sbjct: 494 LGDGSTI-YHITPVAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTD 552
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L+ T AA F + A+T G V WGA G+LG G
Sbjct: 553 RSTPV--AVSGLTSGVTVIAAGRF-HTCALTSSGGVWCWGANFDGQLGDGT--------- 600
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L IAA G+ H+ + +G V+ +GD ++ + P
Sbjct: 601 TTNRTTPVAVSGLPSGVTAIAAGGW-HTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPG 659
Query: 283 LISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
+S LP + G+ HTC LTS GE++ WG N G LG G
Sbjct: 660 AVSGLPSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDG 701
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 133/282 (47%), Gaps = 15/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ +R PV S + A+A GG HT LT +G V+ G N +GQ
Sbjct: 179 WGDNYYGQLGDGTTTNRRTPVAVSGLPS-GVTAIAAGGLHTCALTGSGEVWCWGYNYYGQ 237
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P + GL + I+ G H+ A+ G ++ WG+N +GQLG G
Sbjct: 238 LGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTD 297
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ V L T AA G + A+TG G+V WG G G+LG G
Sbjct: 298 SSTPV--AVSGLPSGVTAIAA-GDYHTCALTGSGEVWCWGGNGFGQLGDGT--------- 345
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V+ AAG H+ + +G V+ +G ++ P+
Sbjct: 346 TTARSTPAAVSGLP-SGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPA 404
Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S LP + GG HTC L S G ++ WG N +G LG G
Sbjct: 405 AVSGLPSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDG 446
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS PV S + A+A G HT LT +G V+ G N GQ
Sbjct: 486 WGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCWGYNLSGQ 544
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+T G ++ WG N +GQLG G
Sbjct: 545 LGDGTTTDRS-TPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTN 603
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G+ + A+T G+V WG G+LG G
Sbjct: 604 RTTPV--AVSGLPSGVTAIAAGGW-HTCALTSSGEVWCWGDNYYGQLGDGT--------- 651
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V AAG+ H+ + +G V+ +GD ++ + P
Sbjct: 652 TTNRSTPGAVSGLP-SGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPG 710
Query: 283 LISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
+S LP + G YHTC LT G + WG+N +G LG G
Sbjct: 711 AVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDG 752
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 130/282 (46%), Gaps = 15/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LG G+ +R P S + A+A G HT LT +G V G N GQ
Sbjct: 77 WGGNDFGQLGDGTPTTRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSGGVRCWGANYSGQ 135
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G S P +SGL V I+ G H+ A+ G + WG N GQLG G
Sbjct: 136 LGNGLTFGRS-TPGAVSGLPSGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTN 194
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+TG G+V WG G+LG G + + R
Sbjct: 195 RRTPV--AVSGLPSGVTAIAAGGL-HTCALTGSGEVWCWGYNYYGQLGDGTTT----YSR 247
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S TP + L IAA G LH+ + +G V+ +G ++ + P
Sbjct: 248 S----TPAAVGGLPSGMTAIAAGG-LHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPV 302
Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S LP + G YHTC LT GE++ WG N G LG G
Sbjct: 303 AVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDG 344
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 126/266 (47%), Gaps = 27/266 (10%)
Query: 66 SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
S+F + A+A GGAHT LT +G V G NDFGQLG S P +SGL
Sbjct: 47 SSFSPLQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRS-TPGAVSGLPSG 105
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-----IPTKVECLSGIFT 179
V I+ G +H+ A+T G + WG N +GQLG G + P +P+ V +
Sbjct: 106 VTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAI----- 160
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G + + A+ G V+ WG G+LG G +T+ TP + L
Sbjct: 161 ---AAGGDHTCALMSSGGVMCWGDNYYGQLGDGT---------TTNRRTPVAVSGLPSGV 208
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYS-EEVVCGG 297
IAA G LH+ + +G V+ +G ++ ++R P+ + LP + GG
Sbjct: 209 TAIAAGG-LHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGG 267
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
HTC L S G ++ WG N++G LG G
Sbjct: 268 LHTCALMSSGGVWCWGRNDSGQLGDG 293
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 133/324 (41%), Gaps = 49/324 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ +R P S ++ +A G HT L +G V+ G N+ GQ
Sbjct: 333 WGGNGFGQLGDGTTTARSTPAAVSGLPS-GVETIAAGDYHTCALMSSGGVWCWGRNNSGQ 391
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G H+ A+ G ++ WG N++GQLG G
Sbjct: 392 LGDGTTTARS-TPAAVSGLPSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTD 450
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE-------- 214
P+ SG+ T A G + A+T G V WG SG+LG G
Sbjct: 451 SSTPVAVS-GLASGVETIAA--GGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVA 507
Query: 215 ----------------------------------SSILGFLRSTSEYTPRLIKELEGVKV 240
S LG +T TP + L V
Sbjct: 508 VSGLPSGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLT-SGV 566
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYH 299
+ AAG H+ + +G V+ +G ++ + P +S LP + GG+H
Sbjct: 567 TVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSGVTAIAAGGWH 626
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
TC LTS GE++ WG N G LG G
Sbjct: 627 TCALTSSGEVWCWGDNYYGQLGDG 650
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 99/201 (49%), Gaps = 20/201 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + A+A GG HT LT +G V+ G N +GQ
Sbjct: 588 WGANFDGQLGDGTTTNRTTPVAVSGLPS-GVTAIAAGGWHTCALTSSGEVWCWGDNYYGQ 646
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G+ H+ A+T GE++ WG N GQLG G
Sbjct: 647 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTN 705
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--- 214
+ P +P+ V + A G + A+TG G V+ WG G G+LG G+
Sbjct: 706 RSTPGAVSGLPSGVTAI--------AAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYR 757
Query: 215 SSILGFLRSTSE--YTPRLIK 233
++ + + S S Y P +I+
Sbjct: 758 TTPVDVVTSASWGVYLPMIIR 778
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -LDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIP-------IPTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWFPYSGQCLPDIDSEE 360
>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
glaber]
Length = 3493
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 153/295 (51%), Gaps = 28/295 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 2677 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2736
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 2737 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2795
Query: 160 KAAKVIPIPTKVECLSGIFTKQA-------ALGFEQSVAV-TGGGKVLSWGAGGSGRLGH 211
+ K +P +V L G QA A G ++AV T G V ++G G G+LG
Sbjct: 2796 TSNK--KLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGL 2853
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKM 270
G ST++ +P+ + L G+ +K A G S + ++G VY FG DR +
Sbjct: 2854 GN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLP 2904
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ NH RP + L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 2905 EGRARNH-NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 2958
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 21/254 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 2731 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2790
Query: 103 LGISENIGYSLEPLRISGLK--------KEVVQISTGYHHSSAITVDGEL-YMWGKNSNG 153
LG+ L P R++ L+ + ++ G +H+ A++ DG + + +G G
Sbjct: 2791 LGLGNTSNKKL-PERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYG 2849
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LGLG AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 2850 KLGLGNSTAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG- 2906
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
R+ + P+ + L GV ++ A G H+ + G VY +G + ++
Sbjct: 2907 --------RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 2958
Query: 274 EGNHARRPSLISKL 287
NH R P+L++ L
Sbjct: 2959 HTNHVREPTLVTVL 2972
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++++WG +GQL +A + + +P S
Sbjct: 2598 INGMDEQIMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 2653
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 2654 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2703
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 2704 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2762
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 2763 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 2794
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C+ F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ P ++ L + +V +S G H+ + G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKS---RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ LS + Q A G+ S+A++ G +V SWG G+LG G +
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G V+ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR RP A + ++ A++CG AHTL L + G VYA G GQL
Sbjct: 59 GCNDLGQLG--HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y+ P I L ++VQ++ GY+HS A++ E++ WG+N +GQLGLG
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S A+T G V WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ + G H+A + + G V+ FG ++ H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286
Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L ++ CG HT + S G +Y++G NG LG+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V IS G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSN 334
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + ++CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + G+ + P ++ L +V QI+ G H+SA + G +Y +G NGQLG+G
Sbjct: 274 LG-HNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGST 332
Query: 161 AAKVIPIPTK 170
+ + P P K
Sbjct: 333 SNRKSPFPVK 342
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C+ F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ P ++ L + +V +S G H+ + G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKS---RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ LS + Q A G+ S+A++ G +V SWG G+LG G +
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G V+ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR RP A + ++ A++CG AHTL L + G VYA G GQL
Sbjct: 59 GCNDLGQLG--HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ Y+ P I L ++VQ++ GY+HS A++ E++ WG+N +GQLGLG
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S A+T G V WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ + G H+A + + G V+ FG ++ H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286
Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L ++ CG HT + S G +Y++G NG LG+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L+ + P + + +A GGAH+ LT +G V+ G N FG
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V IS G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSN 334
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + ++CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + G+ + P ++ L +V QI+ G H+SA + G +Y +G NGQLG+G
Sbjct: 274 LG-HNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGST 332
Query: 161 AAKVIPIPTK 170
+ + P P K
Sbjct: 333 SNRKSPFPVK 342
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q + G+ S+A++ +V SWG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ+S GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L +++Q++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 145/285 (50%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P + LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYE----- 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + TS P++IK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 175 YKKQTS---PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S++VV CG HT LT G ++T+G+ G LG
Sbjct: 232 VPTLLKSL-RSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQTS-PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYH-TCVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG H T + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + + P + L+ + + G H+ +++ G+VY +G A
Sbjct: 64 GQLGHEK-----------ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LA 111
Query: 267 VDKMLFQEGNH--ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
D L G R P I L + +V CG YH+ L+ G E+++WG N+ G LG+
Sbjct: 112 TDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171
Query: 323 G 323
G
Sbjct: 172 G 172
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L VV QI+ G H++A + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTT 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
Kuenenia stuttgartiensis]
Length = 387
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 141/281 (50%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS +S P+ E + A++CGG H L L G V+A G+ND GQ
Sbjct: 111 WGGNWAGQLGDGSYKSSNIPIKTK--ELSGIIAISCGGQHNLALKSDGTVWAWGINDKGQ 168
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LGI + + P+RI GL +V IS G +HS AI DG L+ WG N+ QLG G
Sbjct: 169 LGIGDAKNQQI-PIRIPGL-NNIVAISAGGYHSLAIKSDGSLWAWGSNNMEQLGDGSATN 226
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L I G + S+A+ G +++WG+ G +LG G
Sbjct: 227 RCSPV--HVSNLRDIIAVNG--GGDFSLALKSDGTIMAWGSNGLSQLGDG---------T 273
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + ++ + ++IAA G HS + G+V+ FG + A RP
Sbjct: 274 TTNRNTPVNVSDVRDI-IEIAAKGN-HSLALTIEGKVWEFGSIGATPTEKEVTLPAYRPV 331
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L++++ + CG +H VL + G L+ WG N G LG G
Sbjct: 332 LVNEITDVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDG 372
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 122/260 (46%), Gaps = 17/260 (6%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
V ++F +A G HTL L G +++ G N++GQLG I P+++ L
Sbjct: 30 VKTSFAVQVAPKIAAGAFHTLALKPDGSLWSWGKNEYGQLG-DGTIKNKHSPVQVKHLSS 88
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I G HS A+ DG ++ WG N GQLG G + IPI TK LSGI +
Sbjct: 89 IIV-IDGGAWHSIALKSDGTVWAWGGNWAGQLGDGSYKSSNIPIKTKE--LSGIIA--IS 143
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + ++A+ G V +WG G+LG G + ++ P I L + V I+
Sbjct: 144 CGGQHNLALKSDGTVWAWGINDKGQLGIGD---------AKNQQIPIRIPGLNNI-VAIS 193
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
A G+ HS I +G ++ +G ++++ + P +S L V GG + L
Sbjct: 194 AGGY-HSLAIKSDGSLWAWGSNNMEQLGDGSATNRCSPVHVSNLRDIIAVNGGGDFSLAL 252
Query: 304 TSGGELYTWGSNENGCLGIG 323
S G + WGSN LG G
Sbjct: 253 KSDGTIMAWGSNGLSQLGDG 272
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +LG G+ +R PV S + + +A G H+L LT G V+ +FG
Sbjct: 261 WGSNGLSQLGDGTTTNRNTPVNVS--DVRDIIEIAAKGNHSLALTIEGKVW-----EFGS 313
Query: 103 LGIS----ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G + E + P+ ++ + +V+ I+ G H+ + DG L++WG N+ GQLG G
Sbjct: 314 IGATPTEKEVTLPAYRPVLVNEIT-DVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDG 372
Query: 159 KKAAKVIPI 167
+K P+
Sbjct: 373 TVGSKTKPV 381
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S E+ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V +I+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 151/285 (52%), Gaps = 18/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+GN ++G+LG+GS ++R +P A + + +A G HTL +T++ +Y+ G G
Sbjct: 59 FGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGA 118
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + ++ P I L+ K+V I+ G +HS+AIT +GELY+WG NS GQLGL
Sbjct: 119 LGHGDETDLNM-PTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGL---K 174
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
I PT ++ + + A G+ + VT GK+ ++G G+LG LG +
Sbjct: 175 NDTISYPTMLDLGKSVIS--VACGYYHTAVVTADGKLYTFGETEGGKLG-------LGDI 225
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARR 280
+ P+++K + G VK+A G H+ + +G+VY FG ++ L + +
Sbjct: 226 EAHKVTKPKVVKGISGKVVKVACGGN-HTVALTASGQVYTFGSGQNGQLGLGSKIMDSNI 284
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L+ L + + CG HT V++ GEL+T+G +G LG G
Sbjct: 285 PKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQG 329
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 134/252 (53%), Gaps = 19/252 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
+ACG HT+ +TE G ++ G N++GQLGI N + +P + LK E + ++ G H
Sbjct: 40 IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRN-KPTTVKALKPEKITHVAAGRFH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T +LY +G+ S G LG G + + +PT +E L A G S A+T
Sbjct: 99 TLAVTDSNKLYSFGQGSEGALGHGDETD--LNMPTSIESLEDKDVNIIACGGYHSAAITK 156
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ WG+ G+LG L++ + P ++ +L G V A G+ H+A +
Sbjct: 157 NGELYIWGSNSEGQLG----------LKNDTISYPTML-DL-GKSVISVACGYYHTAVVT 204
Query: 255 ENGRVYIFGDRAVDKMLFQ--EGNHARRPSLISKLP-YSEEVVCGGYHTCVLTSGGELYT 311
+G++Y FG+ K+ E + +P ++ + +V CGG HT LT+ G++YT
Sbjct: 205 ADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTASGQVYT 264
Query: 312 WGSNENGCLGIG 323
+GS +NG LG+G
Sbjct: 265 FGSGQNGQLGLG 276
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 38/290 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G G LG G P + E + +ACGG H+ +T+ G +Y G N GQ
Sbjct: 111 FGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQ 170
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ ++ I Y P + L K V+ ++ GY+H++ +T DG+LY +G+ G+LGLG
Sbjct: 171 LGLKNDTISY---PTMLD-LGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIE 226
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A + P V+ +SG K A G +VA+T G+V ++G+G +G+LG G S I+
Sbjct: 227 AHKVTKPKVVKGISGKVVK-VACGGNHTVALTASGQVYTFGSGQNGQLGLG--SKIM--- 280
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-- 279
P+L++ L K+K A G H+A + + G ++ FGD G H +
Sbjct: 281 ---DSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGD----------GRHGKLG 327
Query: 280 ----------RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+P + +L + CGG HT V + + G ++N
Sbjct: 328 QGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGDDDN 377
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 116/238 (48%), Gaps = 22/238 (9%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG V+ G + FG ++ I K V I+ G H+ +T +G L+
Sbjct: 8 IPETGAVFTFGKSRFGDNRTNK--------FWIRSDK--VTDIACGDEHTVVVTENGRLF 57
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+G N GQLG+G + K PT V+ L A G ++AVT K+ S+G G
Sbjct: 58 TFGNNEWGQLGIG--SNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGS 115
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G LGHG E+ + P I+ LE V I A G HSA I +NG +YI+G
Sbjct: 116 EGALGHGDETDL---------NMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSN 166
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + L + + P+++ V CG YHT V+T+ G+LYT+G E G LG+G
Sbjct: 167 S-EGQLGLKNDTISYPTMLDLGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLG 223
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 96/175 (54%), Gaps = 5/175 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G+LGL + + P + + S+ ++ACG HT +T G +Y G + G
Sbjct: 162 IWGSNSEGQLGLKNDTISY-PTMLDLGK--SVISVACGYYHTAVVTADGKLYTFGETEGG 218
Query: 102 QLGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG+ + + + +P + G+ +VV+++ G +H+ A+T G++Y +G NGQLGLG K
Sbjct: 219 KLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSK 278
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
IP VE LS K A G + V+ G++ ++G G G+LG G ES
Sbjct: 279 IMDS-NIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDES 332
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S E+ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V +I+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S E+ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V +I+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 145/281 (51%), Gaps = 17/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG + ++R PV + + ++ G H+L + G V+A G N GQ
Sbjct: 122 WGNNAYGQLGDDTRDNRTVPVQVTGLS--GVVSVVAGDTHSLAVRSDGSVWAWGRNTSGQ 179
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P++++GL VV ++ G +HS A+ DG ++ WG N++GQLG +AA
Sbjct: 180 LGDGTRDDRAV-PVQVTGLSG-VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAA 237
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+P +VE +SG+ A G S+AV G V +WG G+LG G+ L
Sbjct: 238 --YPVPWRVEDVSGVVA--VAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGK-------LE 286
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S + P+ + L GV +AGF HS + +G V+ +G+ A ++ HA P
Sbjct: 287 GNSRWLPKQVPGLGGVVA--VSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPV 344
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + V G H+ V+ S G L+ WGSN +G G G
Sbjct: 345 QVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDG 385
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 134/283 (47%), Gaps = 21/283 (7%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ YG+LG G LE SRW P + A++ G H+L + G V+A G N +
Sbjct: 272 WGDNLYGQLGDGKLEGNSRWLPKQVPGLG--GVVAVSAGFYHSLVVRSDGTVWAWGNNAY 329
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG ++ P+++ G+ V ++ GY HS + DG L+ WG N +GQ G G
Sbjct: 330 GQLGGGSRA-HAASPVQVLGVSGAVA-VAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTL 387
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P P +V LSG+ + A G +A+ G V +WG SG+LG G
Sbjct: 388 TR--YPTPGRVPGLSGVVS--VAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRH----- 438
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S + PR + EL GV A + F S + +G V+ +GD A ++ + +
Sbjct: 439 ----SRWVPRQVPELSGVVAVAAGSSF--SLAVRYDGSVWSWGDNAYGQLGHGSTDASSV 492
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +L V G H + + G ++ WG N+ G LG G
Sbjct: 493 PLHVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDG 535
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 114/249 (45%), Gaps = 31/249 (12%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
H+L + G V+ TG N GQLG + P+++ GL V ++ G+ HS A+ D
Sbjct: 59 HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRR-TPVQVQGLSG-VAAVAAGHGHSLALRYD 116
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G ++ WG N+ GQLG + + +P+ +V LSG+ + A G S+AV G V +W
Sbjct: 117 GTVWAWGNNAYGQLGDDTRDNRTVPV--QVTGLSGVVSVVA--GDTHSLAVRSDGSVWAW 172
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G SG+LG G P + L GV V +AA G HS + +G V+
Sbjct: 173 GRNTSGQLGDGTRD---------DRAVPVQVTGLSGV-VSVAAGGN-HSLAVRSDGSVWA 221
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEE-------VVCGGYHTCVLTSGGELYTWGS 314
+G+ A G P +P+ E V G YH+ + G ++ WG
Sbjct: 222 WGNNA-------SGQLGGAPEAAYPVPWRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGD 274
Query: 315 NENGCLGIG 323
N G LG G
Sbjct: 275 NLYGQLGDG 283
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 28/285 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG GS ++ V E + A+A G H L + G V+ G ND+GQ
Sbjct: 474 WGDNAYGQLGHGSTDAS--SVPLHVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQ 531
Query: 103 LGIS-ENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG E I P+++ GL +V ++ + HS A+ DG ++ WG N++ +LG G
Sbjct: 532 LGDGFEGISARRYSPVQVPGLSG-MVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTT 590
Query: 161 AAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+++P+ P V LS G+ S+A+ G + +WG +G+LG G
Sbjct: 591 TRRLVPLRVNAPGTVALLSA--------GYNYSMAMRADGSLWAWGTNFAGQLGDGS--- 639
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+TS P ++ V+ AAG HS + +G ++ +G ++
Sbjct: 640 ------TTSRAVP--VRVQGPVRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLT 691
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
H P + + V + + S G L+ WG+N+ G LG
Sbjct: 692 HHALPVRVPGMSGVVAVDVTLNLSLAVRSDGSLWAWGNNDVGQLG 736
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 118/251 (47%), Gaps = 18/251 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQISTGYH 133
++A GG H L L G V+A G N GQLG + +S P ++ L VV ++ G
Sbjct: 404 SVAAGGGHVLALLSDGTVWAWGDNASGQLG--DGTRHSRWVPRQVPELSG-VVAVAAGSS 460
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
S A+ DG ++ WG N+ GQLG G A +P+ V LS + A G ++AV
Sbjct: 461 FSLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPL--HVRELSEVVA--VAAGSMHALAVR 516
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G V WG G+LG G E S Y+P + L G+ V +AA F HS +
Sbjct: 517 ADGTVWGWGFNDYGQLGDGFEGI------SARRYSPVQVPGLSGM-VSVAAD-FGHSLAV 568
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTW 312
+G V+ +G+ D L R L P + ++ GY ++ + + G L+ W
Sbjct: 569 RADGTVWAWGNN-TDSELGDGTTTRRLVPLRVNAPGTVALLSAGYNYSMAMRADGSLWAW 627
Query: 313 GSNENGCLGIG 323
G+N G LG G
Sbjct: 628 GTNFAGQLGDG 638
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN LG G+ R P+ +A ++ L+ G +++ + G ++A G N GQ
Sbjct: 577 WGNNTDSELGDGTTTRRLVPLRVNA--PGTVALLSAGYNYSMAMRADGSLWAWGTNFAGQ 634
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+R+ G + ++ G HS A+ DG L+ WG N GQLG G
Sbjct: 635 LGDGSTTSRAV-PVRVQGPVRAST-LAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTH 692
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+ +V +SG+ L S+AV G + +WG G+LG + + +R
Sbjct: 693 HALPV--RVPGMSGVVAVDVTLNL--SLAVRSDGSLWAWGNNDVGQLGTQPSTYVTTAVR 748
Query: 223 ST 224
S+
Sbjct: 749 SS 750
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S E+ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V +I+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGI 177
+ + P P +CL I
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDI 356
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGI 177
+ + P P +CL I
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDI 356
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 146/287 (50%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + S+ + + LA HTL +TE+G V++ G D+
Sbjct: 1856 GEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTESGEVFSWGDGDY 1915
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EV+Q+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 1916 GKLGHG-NSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGT 1974
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
K +PT+V L A G ++ V+ G V ++G G G+LG G
Sbjct: 1975 TTNK--KVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGN----- 2027
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ ++ P IK L+G +K A G S + + G+V+ +G + G
Sbjct: 2028 ----TVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQERLIGQPDTRGGSN 2083
Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+P ++ L + E+VVCG HT VLTS G+++ WGSN G LG+G
Sbjct: 2084 CQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLG 2130
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + L+CG H+ +T G ++ G D+G+
Sbjct: 1910 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGR 1969
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG+ + P R+ L+ + ++ G +H+ ++ DG ++ +G G+LG G
Sbjct: 1970 LGLGTTTNKKV-PTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNT 2028
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K +PTK++ L G K+ A G + SVA++ GKV +W G RL GQ +
Sbjct: 2029 VGKH--LPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTW---GQERL-IGQPDT---- 2078
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHAR 279
R S P+ + L G ++ G H+ + +G V+ +G + ++ L + R
Sbjct: 2079 -RGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPVR 2137
Query: 280 RPSLISKL 287
P L+ L
Sbjct: 2138 EPQLVPCL 2145
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E ++WG NGQ+ G + A V P +V S ++Q G + V G VL+ G
Sbjct: 1802 EAFLWGSGRNGQMCEGGRGAFV---PVRVPSFS--CSQQIVCGQNCTFVVQNNGTVLACG 1856
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLG G S L L + S ++ +L + + G H+ + E+G V+ +
Sbjct: 1857 EGSYGRLGQGN-SDDLHSLTAISSIQGFVVTQL---ATSVGSDG--HTLAVTESGEVFSW 1910
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGC 319
GD K+ + RRP I L EEV+ CG H+ V+T+ G+L+T+G+ + G
Sbjct: 1911 GDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGR 1969
Query: 320 LGIG 323
LG+G
Sbjct: 1970 LGLG 1973
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
+ +L S E+ CG HT S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTG 330
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + S V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V +I+ G H+S + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S E+ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V +I+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ L+ I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L + +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 148/299 (49%), Gaps = 28/299 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + P V A H + +ACG HT +T+ G V G + GQ
Sbjct: 94 WGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQ 153
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + SL P +S L E + QI+ G H+ A++V+GE+Y WG ++GQLG+GK
Sbjct: 154 LGQGDWTS-SLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQ 212
Query: 162 AKV--IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P KV + A G +A+T ++ SWG G GRLG G
Sbjct: 213 EETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGD------ 266
Query: 220 FLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGD---------RAVDK 269
S S ++P +++ +E +++ AAG H+A + +NG ++ G A +
Sbjct: 267 ---SESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQ 323
Query: 270 MLFQEGNHARRPSLISKLPYSEE-----VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ R L+ + + CG HT V+++ GE++ WG+ E+G LG G
Sbjct: 324 LTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTG 382
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 25/301 (8%)
Query: 41 ALWGNGDYGRLGLGSLESRWRP------------VVCSAFEKHSLKA---LACGGAHTLF 85
+L G G++GRLG G S+ P + +A SL +ACGG HT+
Sbjct: 25 SLQGWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVA 84
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+TE G V + G + GQLG ++ + + V ++ GY+H++ +T G +
Sbjct: 85 VTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVM 144
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
WGK ++GQLG G + + +P V L +Q A G ++A++ G++ SWGAG
Sbjct: 145 CWGKGNSGQLGQGDWTSSL--LPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGA 202
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G+ + TP+ ++ E K + A G H I ++ R++ +G
Sbjct: 203 DGQLGVGKHQE-----ETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLG 257
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
A ++ + P+++ + + V GG+HT VL+ GE++T G G LG
Sbjct: 258 ADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGH 317
Query: 323 G 323
G
Sbjct: 318 G 318
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S E+ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V +I+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGI 177
+ + P P +CL I
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDI 356
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ L+ I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L + +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 143/285 (50%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P +IK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L +++VV CG HT LT G ++T+G+ G LG
Sbjct: 232 VPTLLKSL-RTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYH-TCVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG H T + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P V + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H++A + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTT 332
Query: 161 AAKVIP-------IPTKVECL 174
+ + P +P +CL
Sbjct: 333 SNRKSPFTVKGNWLPYSTQCL 353
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 143/285 (50%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P +IK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L +++VV CG HT LT G ++T+G+ G LG
Sbjct: 232 VPTLLKSL-RTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYH-TCVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG H T + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P V + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H++A + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTT 332
Query: 161 AAKVIP-------IPTKVECL 174
+ + P +P +CL
Sbjct: 333 SNRKSPFTVKGNWLPYSTQCL 353
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 143/285 (50%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P + L + +V +S G H+ A+ G++Y WG ++GQLGL
Sbjct: 64 GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I +P ++ LS I Q A G+ S+A++ G +V SWG G+LG G E
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P +IK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L +++VV CG HT LT G ++T+G+ G LG
Sbjct: 232 VPTLLKSL-RTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG ++R RP A + ++ A++CG AHTL L + G VYA GL GQL
Sbjct: 59 GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ P I L + ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG ++
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L KV G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYH-TCVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG H T + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P V + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG++++ + L S ++VV I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSN 334
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H++A + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTT 332
Query: 161 AAKVIP-------IPTKVECL 174
+ + P +P +CL
Sbjct: 333 SNRKSPFTVKGNWLPYSTQCL 353
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
aries]
Length = 1137
Score = 131 bits (329), Expect = 5e-28, Method: Composition-based stats.
Identities = 99/320 (30%), Positives = 159/320 (49%), Gaps = 23/320 (7%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K+DI + G I++ + F ++G+ ++G+LGLGS + +P A +
Sbjct: 54 SKFWFKKDIPISLSCGDEHTAITTGNNKLF--MFGSNNWGQLGLGSKATVNKPTCIKALK 111
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
+K +ACG HTL LT G VYATG N+ GQLG+ E + L S + ++
Sbjct: 112 PEKVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTS--QHKIK 169
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+S G + S+A+T DGEL+MWG NS GQ+GL +P V G + G+
Sbjct: 170 QLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTV----GKPISWISCGY 225
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G++ ++G SG+LG + + + P+L+ + +++A G
Sbjct: 226 YHSAFVTTEGELYTFGEPESGKLGLPPKLLV-------NHKVPQLVPGISEKVIQVACGG 278
Query: 247 FLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
H+ + E VY FG ++ L P +I + + V CG HT ++
Sbjct: 279 G-HTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 336
Query: 304 TSGGELYTWGSNENGCLGIG 323
T G LYT+G +G LG+G
Sbjct: 337 TESGLLYTFGDGRHGKLGLG 356
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 14/69 (20%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P +CS F K+ + +ACGG H L V+AT
Sbjct: 345 FGDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGGCHML-------VFAT----- 392
Query: 101 GQLGISENI 109
+LG++E+I
Sbjct: 393 PRLGMAEDI 401
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFGQ 102
G G+ G+LG G E R P + A + +ACG HT + T +Y+ G DFG+
Sbjct: 30 GRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGR 89
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N P I L+ E+ QI+ G H A+T DGE+Y WG+N NGQLGLG
Sbjct: 90 LG-HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTD 148
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P K+ G+ K A G E + AVT GGK+ WG G G LG G +
Sbjct: 149 DSL--VPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRM--- 203
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + + K+ + A G+ H+ + ++G++Y +G ++ + P
Sbjct: 204 ------LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLP 257
Query: 282 SLISKLP-YSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
++ L ++ V GG+ HT LT G+LY WG N+ G +G G
Sbjct: 258 HQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSG 301
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 139/285 (48%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + ++ +ACG +H L +T G VY+ G N GQ
Sbjct: 82 WGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQ 141
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P ++ + V ++ G H++A+T G+LY WG G LGLG +
Sbjct: 142 LGLGDTDD-SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRG 200
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V + A G+ ++AV+ GK+ ++G G+LGHG + L
Sbjct: 201 DRM--LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL--- 255
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + L + + G+ H+ + E G++Y +G ++ + + P
Sbjct: 256 ------LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSP 309
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
LIS + VV CG HT +T +Y+WG +G LG G
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHG 354
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 36/262 (13%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P I L E+ ++ G H
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHL-PRIIGALNDCEISLVACGADH 68
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
++A + +Y WG G+LG G + +P P K L G+ +Q A G +AVT
Sbjct: 69 TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK--ALQGLEIRQIACGDSHCLAVT 126
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P + EGV VK+ AAG H+A +
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSL---------VPHKLLAFEGVSVKMLAAGAEHTAAV 177
Query: 254 DENGRVYIF----------GDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
+ G++Y + GDR D+ML P+ + + + V CG HT
Sbjct: 178 TDGGKLYGWGWGRYGNLGLGDRG-DRML---------PAEVPAVGDEKMCMVACGWRHTI 227
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++ G+LYT+G ++ G LG G
Sbjct: 228 AVSQSGKLYTYGWSKYGQLGHG 249
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G P +A + ++ ++ G HT+ LTE G +Y G N FGQ+G S
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVG-SG 301
Query: 108 NIGYSLEP--LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
++ P + I G + VVQ+S G+ H+ A+T +Y WG+ ++GQLG G +
Sbjct: 302 DVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDR-- 359
Query: 166 PIPTKVECLSGIFTKQAALGFEQS--VAVTGGGKVLSW 201
P ++ LS +A G E+S AVTG G V +W
Sbjct: 360 SAPKGIQALSA--DGKACEGLEKSPEPAVTGSG-VANW 394
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ G+ WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 142/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ +GE + WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 146/288 (50%), Gaps = 22/288 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
WG G+ G+LG G + P S ++++ CG +T+ + + G VY+ G DFG
Sbjct: 37 WGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFG 96
Query: 102 QLGISE-NIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + N + P+ SG + V +++ G H+ + +GEL+ +G+N NGQLGLG
Sbjct: 97 RLGHGDCNDVFVPRPIEFFSG--RPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGH 154
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P V L G + A G E S+A T G V SWG G G LG G+
Sbjct: 155 TNDCL--SPQLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGE------ 206
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S Y P + LEG+++ A G+ HSA + E+GRV+ FG ++ G+H
Sbjct: 207 ---SQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQL--GHGDHTD 261
Query: 280 R--PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
R P ++ L ++ V GG+ HT S G LY WG N+ G LG+G
Sbjct: 262 RTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLG 309
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 130/285 (45%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G + P F + +ACG HTL + G ++ G N GQ
Sbjct: 90 WGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQ 149
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + L P + L+ E V+ ++ G HS A T G ++ WG G LG G+
Sbjct: 150 LGLG-HTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQ 208
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +PT+V L GI A G+ S V+ G+V ++G G+LGHG
Sbjct: 209 DRY--LPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDH------- 259
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T P + L ++ A G+ H+ D +G +Y +G ++ + + P
Sbjct: 260 --TDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSP 317
Query: 282 SLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L+ + V CG HT +T GG +Y+WG NG LG G
Sbjct: 318 VLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHG 362
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 5/177 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LG G + R+ P E + + CG H+ ++E G V+ G + +GQ
Sbjct: 194 WGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQ 253
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ ++ P +++ L+ + ++ G+ H+ A G LY WG N GQLGLG +
Sbjct: 254 LGHGDHTDRTV-PCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSS 312
Query: 162 AKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P P V L+G G+ +VAVT GG+V SWG G +G+LGHG E +
Sbjct: 313 DR--PSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQDL 367
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 90/210 (42%), Gaps = 14/210 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
R S + V +S G HS AI G + WG+ +GQLG G+ A P + L+
Sbjct: 7 RSSEEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQ--ADECLAPKAISTLTD 64
Query: 177 IFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
+ G E ++AV G+V SWG G GRLGHG + + + PR I+
Sbjct: 65 AGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDV---------FVPRPIEFF 115
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEV 293
G V A G H+ + G ++ FG ++ N P L+ L V
Sbjct: 116 SGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSV 175
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ T G +++WG G LG G
Sbjct: 176 ACGSEHSLAATESGTVFSWGWGRYGNLGDG 205
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 137/287 (47%), Gaps = 22/287 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +R PV ++ ALA GG+H+L LT+TG V A G N GQ
Sbjct: 62 WGDNFSGQLGDGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSNSRGQ 121
Query: 103 LGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+ + GL + ++ G HS A+T G + WG NSNGQLG G
Sbjct: 122 LGDGTTTDRS-TPVTV-GLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ P+ + + I A+ S+A+T G L+WG+ G+LG G
Sbjct: 180 TARSTPVTVGLPAGTTITALAAS---TYSLALTDTGAALAWGSNSRGQLGDGT------- 229
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T TP + G + AA + HS + + G V +G + ++ +G R
Sbjct: 230 --TTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQL--GDGTTTNR 285
Query: 281 PSLISK-LPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ LP + G HT VLTS G + WGSN NG LG G
Sbjct: 286 STPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDG 332
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 126/285 (44%), Gaps = 18/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV ++ ALA G H+L LT+TG V A G N GQ
Sbjct: 114 WGSNSRGQLGDGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQ 173
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ + + +S A+T G WG NS GQLG G
Sbjct: 174 LGDGTTTARS-TPVTVGLPAGTTITALAASTYSLALTDTGAALAWGSNSRGQLGDGTTTD 232
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V +G A ++ S+A+T G VL+WG+ +G+LG G
Sbjct: 233 RSTPV--TVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGT--------- 281
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + G + AAG H+ + G V +G + ++ +G R +
Sbjct: 282 TTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQL--GDGTTTDRST 339
Query: 283 LISK-LPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ LP + G YH+ LT G + WG N G LG G
Sbjct: 340 PVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGDG 384
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 35 LQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
L AAL WG+ G+LG G+ R PV S ++ ALA H+L LT+TG V
Sbjct: 208 LTDTGAALAWGSNSRGQLGDGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVL 267
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNS 151
A G N GQLG S P+ + GL + ++ G H+ +T G + WG NS
Sbjct: 268 AWGSNSNGQLGDGTTTNRS-TPVTV-GLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNS 325
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
NGQLG G + P+ V +G A G+ S+A+T G VL+WG G+LG
Sbjct: 326 NGQLGDGTTTDRSTPV--TVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGD 383
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +T TP + G + + + +D +G + + +
Sbjct: 384 GT---------TTDRSTPVTVGLPAGTTITVLVS-------MDNHGMALVAPPTSTTTLQ 427
Query: 272 FQEGNHA 278
N A
Sbjct: 428 VTPANPA 434
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
VL+WG SG+LG G +T+ TP + G + AAG HS + +
Sbjct: 58 TVLAWGDNFSGQLGDGT---------TTARSTPVTVGLPAGTTITALAAGGSHSLALTDT 108
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISK-LPYSEEVV---CGGYHTCVLTSGGELYTW 312
G V +G + ++ +G R + ++ LP + G H+ LT G + W
Sbjct: 109 GVVLAWGSNSRGQL--GDGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAW 166
Query: 313 GSNENGCLGIG 323
GSN NG LG G
Sbjct: 167 GSNSNGQLGDG 177
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 150/288 (52%), Gaps = 32/288 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 3590 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3649
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3650 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 3708
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P ++ A G ++AV+ G ++ ++G G G+LG G
Sbjct: 3709 TSNKKLP-------------ERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 3750
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ + L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 3751 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3806
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP + L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 3807 -NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 3853
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 426 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 485 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 544
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 545 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 600
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 601 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 650
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 651 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 698
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 23/246 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 3644 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 3703
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKKA 161
LG+ KK +++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 3704 LGLGNTSN-----------KKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 3752
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
AK P KV+ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 3753 AKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG--------- 3801
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R+ + P+ + L GV ++ A G H+ + G VY +G + ++ NH R P
Sbjct: 3802 RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 3861
Query: 282 SLISKL 287
+L++ L
Sbjct: 3862 TLVTVL 3867
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 365 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 420
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 421 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 480
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 481 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 531
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 532 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 591
Query: 320 LGIG 323
LG G
Sbjct: 592 LGHG 595
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 480 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 539
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 540 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 596
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 597 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 651
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 652 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 692
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 641
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H A++ D E+Y WG NS GQ G G
Sbjct: 642 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 701
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 702 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3511 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3566
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 3567 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3616
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 3617 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3675
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 3676 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 3707
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 533 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 590
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 591 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 647
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 648 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 699
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 700 --STGPITKPKKVSGLDGIAIQQISAGTSHS 728
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 FPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 134/289 (46%), Gaps = 30/289 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG GS R PV S + A+A GGAHT L +G V+ G N GQ
Sbjct: 135 WGGNYFGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGGAHTCALMSSGGVWCWGYNLSGQ 193
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I Y + P+ +SGL EV I+ GY H+ A+T G ++ WG N GQLG G
Sbjct: 194 LGDGSTI-YHITPVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTD 252
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P +P+ V + A G + A+T G V WG SG+LG G
Sbjct: 253 SSTPAAVGGLPSGVTAI--------AAGGRYTCALTSSGGVWCWGRNDSGQLGDGSF--- 301
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T+ TP + L IAA G H+ + +G V+ +G D +G++
Sbjct: 302 ------TNRSTPGAVGGLPSGVTAIAAGG-AHTCALTSSGGVWCWGGN--DSGQLGDGSY 352
Query: 278 ARR--PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R P +S LP + GG HTC TS G ++ WG N G LG G
Sbjct: 353 TDRSTPGAVSGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDG 401
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 133/284 (46%), Gaps = 20/284 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R PV S + A+A GGAHT LT +G V G N FGQ
Sbjct: 84 WGYNWSGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGGAHTCALTSSGGVMCWGGNYFGQ 142
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+ G ++ WG N +GQLG G
Sbjct: 143 LGDGSYTDRS-TPVAVSGLPSGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIY 201
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G+ + A+TG G V WG G G+LG G
Sbjct: 202 HITPV--AVSGLPSEVTAIAA-GYAHTCALTGSGGVWCWGDNGFGQLGDGSF-------- 250
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
T TP + L IAA G ++ + +G V+ +G D +G+ R
Sbjct: 251 -TDSSTPAAVGGLPSGVTAIAAGG-RYTCALTSSGGVWCWGRN--DSGQLGDGSFTNRST 306
Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + LP + GG HTC LTS G ++ WG N++G LG G
Sbjct: 307 PGAVGGLPSGVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDG 350
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+ +R P + A+A G HT L +G V+ GLN+ GQ
Sbjct: 492 WGRNDSGQLGDGTTTNRSTPGAVGGLPS-GVTAIAAGDYHTCALMSSGGVWCWGLNNRGQ 550
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ + GL V+ I+ G +H+ A+T ++ WG NS+GQLG G
Sbjct: 551 LGDGSYTDSS-TPVAVGGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTN 609
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+T G V WG SG+LG G
Sbjct: 610 RSTPV--AVSGLPSGVTAIAA-GNYHTCALTSSGGVWCWGYNLSGQLGDGT--------- 657
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V AAG H+ + +G V+ +GD ++ + P
Sbjct: 658 TTNRSTPGAVSGLP-SGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPG 716
Query: 283 LISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
+S LP + G YHTC LT G + WG+N +G LG G
Sbjct: 717 AVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDG 758
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 127/289 (43%), Gaps = 30/289 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG GS +R P + A+A GGAHT LT +G V+ G ND GQ
Sbjct: 288 WGRNDSGQLGDGSFTNRSTPGAVGGLPS-GVTAIAAGGAHTCALTSSGGVWCWGGNDSGQ 346
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G H+ A T G ++ WG N GQLG G
Sbjct: 347 LGDGSYTDRS-TPGAVSGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTD 405
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P +P+ V + A G + A+TG V WG G+LG G
Sbjct: 406 RSTPGAVSGLPSGVTAI--------AAGNYHTCALTGSDGVWCWGDNFYGQLGDGT---- 453
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+T+ TP + L V AAG H+ + +G V+ +G D +G
Sbjct: 454 -----TTNRSTPGAVSGLP-SGVTAIAAGNYHTCALTSSGGVWCWGRN--DSGQLGDGTT 505
Query: 278 ARR--PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R P + LP + G YHTC L S G ++ WG N G LG G
Sbjct: 506 TNRSTPGAVGGLPSGVTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDG 554
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 128/287 (44%), Gaps = 26/287 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R P S + A+A G HT LT + V+ G N +GQ
Sbjct: 390 WGGNFYGQLGDGTTTDRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSDGVWCWGDNFYGQ 448
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G +H+ A+T G ++ WG+N +GQLG G
Sbjct: 449 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTN 507
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P +P+ V + A G + A+ G V WG G+LG G
Sbjct: 508 RSTPGAVGGLPSGVTAI--------AAGDYHTCALMSSGGVWCWGLNNRGQLGDGSY--- 556
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T TP + L + I AAG H+ + + V+ +G + ++ +
Sbjct: 557 ------TDSSTPVAVGGLPSGVMAI-AAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTN 609
Query: 278 ARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S LP + G YHTC LTS G ++ WG N +G LG G
Sbjct: 610 RSTPVAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDG 656
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 122/260 (46%), Gaps = 16/260 (6%)
Query: 66 SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
S+F + A+A G HT LT +G V+ G N GQLG S P+ +SGL
Sbjct: 54 SSFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRS-TPVAVSGLPSG 112
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V I+ G H+ A+T G + WG N GQLG G + P+ V L T AA
Sbjct: 113 VTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPV--AVSGLPSGVTAIAA- 169
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + A+ G V WG SG+LG G S+I TP + L +V A
Sbjct: 170 GGAHTCALMSSGGVWCWGYNLSGQLGDG--STIY-------HITPVAVSGLP-SEVTAIA 219
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVL 303
AG+ H+ + +G V+ +GD ++ + P+ + LP + GG +TC L
Sbjct: 220 AGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAAGGRYTCAL 279
Query: 304 TSGGELYTWGSNENGCLGIG 323
TS G ++ WG N++G LG G
Sbjct: 280 TSSGGVWCWGRNDSGQLGDG 299
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + A+A G HT LT +G V+ G N GQ
Sbjct: 594 WGTNSDGQLGDGTTTNRSTPVAVSGLPS-GVTAIAAGNYHTCALTSSGGVWCWGYNLSGQ 652
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G H+ A+T G ++ WG N GQLG G
Sbjct: 653 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTN 711
Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+ P +P+ V + A G + A+TG G V+ WG G G+LG G+
Sbjct: 712 RSTPGAVSGLPSGVTAI--------AAGVYHTCALTGSGGVMCWGNNGDGQLGDGRP 760
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R P S + A+A G HT LT +G V+ G N +GQ
Sbjct: 645 WGYNLSGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGDEHTCALTGSGGVWCWGDNYYGQ 703
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +SGL V I+ G +H+ A+T G + WG N +GQLG G+
Sbjct: 704 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLY 762
Query: 163 KVIPIPTKVECLSGIF 178
+ P+ G++
Sbjct: 763 RTTPVDVVTSASWGVY 778
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 146/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L ++++V CG HT LT G ++T+G+ G LG
Sbjct: 232 FPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYK 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K A P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y P L+K L K+ G H+A + + G V+ FG ++ +H
Sbjct: 229 -----DRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 130 bits (326), Expect = 1e-27, Method: Composition-based stats.
Identities = 95/284 (33%), Positives = 142/284 (50%), Gaps = 18/284 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R P S+ ++ G +H+L LT+ G V+A GLN GQ
Sbjct: 94 WGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGESHSLALTDDGRVFAWGLNSSGQ 151
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ GL + + ++ G +HS A+T DG ++ WGKNS+GQLG
Sbjct: 152 LG-DGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNST 210
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
IP+ +V+ L T AA G S+A+T G++ +WG SG+LG G S
Sbjct: 211 VDSSIPV--QVQGLPANVTAVAA-GGNHSLALTSDGRIYAWGLNSSGQLGDGTTS----- 262
Query: 221 LRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TP L+ L G K +AG HS + ++G VY +G + ++ +
Sbjct: 263 ----NSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASE 318
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ L V GG + LTS G +Y WG N +G LG G
Sbjct: 319 MPVQVTGLANVTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDG 362
Score = 114 bits (285), Expect = 7e-23, Method: Composition-based stats.
Identities = 89/255 (34%), Positives = 127/255 (49%), Gaps = 22/255 (8%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A++ GG+H+L LT V+A G N GQLG G P GL V Q+S G H
Sbjct: 74 AVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQ-TPTPAQGLP-SVAQVSAGESH 131
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVT 193
S A+T DG ++ WG NS+GQLG G A P+ +V+ L+ T K A G S+A+T
Sbjct: 132 SLALTDDGRVFAWGLNSSGQLGDGTTADSRTPV--QVQGLATDSTIKVVAAGGNHSLALT 189
Query: 194 GGGKVLSWGAGGSGRLGHGQ--ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
G+V +WG SG+LG+ +SSI P ++ L V AAG HS
Sbjct: 190 SDGRVFAWGKNSSGQLGNNSTVDSSI-----------PVQVQGLPA-NVTAVAAGGNHSL 237
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
+ +GR+Y +G + ++ +++ P L++ LP + V G H+ L G
Sbjct: 238 ALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGT 297
Query: 309 LYTWGSNENGCLGIG 323
+Y WG N G LG G
Sbjct: 298 VYAWGGNSYGQLGNG 312
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 70/182 (38%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R FA WG G+LG S PV ++ A+A GG H+L LT G +YA G
Sbjct: 193 RVFA--WGKNSSGQLGNNSTVDSSIPVQVQGLPA-NVTAVAAGGNHSLALTSDGRIYAWG 249
Query: 97 LNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LN GQLG S P+ ++GL + V +S G HS A+ DG +Y WG NS GQ
Sbjct: 250 LNSSGQLG-DGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQ 308
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G A +P+ +V L+ + A G S+A+T G V +WG SG+LG G
Sbjct: 309 LGNGTTTASEMPV--QVTGLANVTAVSA--GGSDSLALTSDGYVYAWGLNSSGQLGDGTT 364
Query: 215 SS 216
S+
Sbjct: 365 SN 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK-ALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG G+ + PV+ + S A++ G H+L L + G VYA G N +G
Sbjct: 248 WGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYG 307
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + P++++GL V +S G S A+T DG +Y WG NS+GQLG G +
Sbjct: 308 QLGNGTTTASEM-PVQVTGLAN-VTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTTS 365
Query: 162 AKVIPI 167
+ P+
Sbjct: 366 NRNTPV 371
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 135/279 (48%), Gaps = 19/279 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG GS R PV + + A+A G H+L L G V+A G ND+GQ
Sbjct: 197 WGNNGYGQLGNGSTAHRATPVQVPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQ 254
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +S P+ + GL +VV ++ G HS A+ DG ++ WG N GQLG
Sbjct: 255 LGNGTTV-HSPTPVPVPGLS-QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 312
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +VE L + A GF S+AV GG + SWG SG+LG+G SS
Sbjct: 313 RTKP--GRVEGLREVVA--VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS------ 362
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L V AAG +HS + +G V+ +G ++ + P
Sbjct: 363 ---SARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 417
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L V G YH+ + +GG L+ WG N+ G LG
Sbjct: 418 RVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLG 456
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG G+ +R P + A+A GG+H L L G V+A G N +GQL
Sbjct: 148 GSNSAGQLGNGTTAARSAPRPVPGLSR--AVAVAAGGSHALALCADGTVWAWGNNGYGQL 205
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + + + P+++ GL+ VV ++ GY HS A+ DG ++ WG N GQLG G
Sbjct: 206 G-NGSTAHRATPVQVPGLQG-VVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHS 263
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P+P V LS + + AA GF S+A+ G V +WG G G+LG S
Sbjct: 264 PTPVP--VPGLSQVVSV-AAGGFH-SLALCADGTVWAWGNNGFGQLGEAV---------S 310
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
T P ++ L +V A GF HS + G ++ +G+ ++ + + RP+
Sbjct: 311 TQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAP 368
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L V GG H+ + + G ++ WG NE G LG
Sbjct: 369 VQGLGAVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLG 406
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 17/266 (6%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
S+ R A ++ ++A+A G ++L L G V+A G N GQLG S P
Sbjct: 110 SKHRATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARS-APRP 168
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+ GL + V ++ G H+ A+ DG ++ WG N GQLG G A + P+ +V L G+
Sbjct: 169 VPGLSRAVA-VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPV--QVPGLQGV 225
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
A G+ S+A+ G V +WG G+LG+G + TP + L
Sbjct: 226 VA--VAGGYMHSLALCADGTVWAWGFNDYGQLGNGT---------TVHSPTPVPVPGLSQ 274
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
V V +AA GF HS + +G V+ +G+ ++ +P + L V G
Sbjct: 275 V-VSVAAGGF-HSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGF 332
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
YH+ + +GG L++WG+N +G LG G
Sbjct: 333 YHSLAVRAGGSLWSWGNNYSGQLGNG 358
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG GS S RP ++ ++A GG H++ + G V+A G N+ GQ
Sbjct: 347 WGNNYSGQLGNGSFSSSARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQ 404
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG E P+R+ GL+ EV ++ G++HS ++ G L+ WG N GQ LG A
Sbjct: 405 LG-HERAPERATPVRVPGLQGEVA-VAAGFYHSLSVQAGGSLWAWGLNDFGQ--LGDSEA 460
Query: 163 KVIPIPTK 170
++P+P
Sbjct: 461 PLMPVPAP 468
>gi|452821114|gb|EME28148.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 424
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 167/337 (49%), Gaps = 28/337 (8%)
Query: 9 MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLG-LGSLE---------S 58
M YY K++I + + S +R WGN D G G L S E S
Sbjct: 1 MFSYYGKKNILFIRFIYHNRYSYKSKGRRSIVYAWGNSDGGWTGHLPSEEYEDHVSGATS 60
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEP 115
+RP + ++ + S++ +ACG TLF+T+ G VY++G+ +GQLG + E G +L
Sbjct: 61 VYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITL-- 118
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
I + ++V+ + G HS +T G LY G G+LGLG ++ + P VE L+
Sbjct: 119 --IDSIPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLG-TISRRMETPQLVESLA 175
Query: 176 GIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL------RSTSEY 227
K + A G S+A++ GKV S+G+ G LGHG+ + FL E
Sbjct: 176 REEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGI-FLWEPFHSHRNMET 234
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+PRLI+ LE +++ + G H+ I++ G + +G + +P + L
Sbjct: 235 SPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHL 294
Query: 288 PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +++V GG HT LT GG+++ WG N GCLG+G
Sbjct: 295 PGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVG 331
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL---KKEVVQ-IS 129
K + GGAHTL LT+ G V+A G+N FG LG+ E EP + L KE +Q I+
Sbjct: 299 KQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIA 358
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G+ S A+ +G +Y WG+ G LG G++ K P+ + E + + GF +
Sbjct: 359 AGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVDRIYAGFNYA 418
Query: 190 VAV 192
+AV
Sbjct: 419 IAV 421
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 44 GNGDYGRLGLGSLESRWRP---VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
G G G LGLG++ R V A E+ + +A G ++ L+E+G VY+ G +
Sbjct: 149 GYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSAND 208
Query: 101 GQLGISENIG--YSLEPLR-----------ISGLKKEVVQ-ISTGYHHSSAITVDGELYM 146
G LG E G + EP I L+KE ++ IS G H+ AI +G +
Sbjct: 209 GHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFG 268
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG + P + L G + KQ G ++ +T GG+V +WG
Sbjct: 269 WGCGRYHCFATDNEVN--WEQPQALFHLPGPW-KQIVSGGAHTLGLTKGGQVWAWGVNHF 325
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKEL---EGVKVKIAAAGFLHSACIDENGRVYIFG 263
G LG G++ TS PR++++L ++ AAG+ S +D G VY +G
Sbjct: 326 GCLGVGEQ--------RTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSMAVDSEGYVYSWG 377
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 18/201 (8%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A EK ++ ++CG H + + G + G + + + +P + L
Sbjct: 236 PRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWE-QPQALFHL 294
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECL---SGI 177
QI +G H+ +T G+++ WG N G LG+G++ + P P VE L +
Sbjct: 295 PGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQ--RTSPGEPRIVEKLLQQAKE 352
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ A G+ S+AV G V SWG G +G LG G+E ++ P I+ +G
Sbjct: 353 PIQWIAAGWFFSMAVDSEGYVYSWGRGHAGALGTGEEE---------DKWEPVAIQNEQG 403
Query: 238 --VKVKIAAAGFLHSACIDEN 256
++V AGF ++ + +
Sbjct: 404 EPLQVDRIYAGFNYAIAVKDE 424
>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
Length = 1413
Score = 129 bits (325), Expect = 2e-27, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 159/324 (49%), Gaps = 27/324 (8%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
A +K++LK D+ L G + + + F ++G+ ++G+LGLG+ + +P A
Sbjct: 27 APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
+ +K ACG HTL T G +YA G N+ GQLG+ + N S + + +
Sbjct: 85 LKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G + S+A+T DG LYMWG NS GQ+GLGK++ + P V G + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G + ++G SG+LG E + + P+ + ++ V++A G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253
Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
H+ + EN VY FG ++ +F+ +R P ++ + CG H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T ++T G LYT+G +G LG+G
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLG 331
Score = 45.8 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G G +G+LG G+ ESR P V F K +K ACG HT +T+ G +Y G
Sbjct: 267 FGLGQFGQLGHGTFIFESRL-PRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRH 325
Query: 101 GQLGISE 107
G+LG+ E
Sbjct: 326 GKLGLGE 332
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
+G+G +G+LGLG + ++++P +C F + + ++ CGG H L L +
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 135/279 (48%), Gaps = 19/279 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG GS R PV + + A+A G H+L L G V+A G ND+GQ
Sbjct: 194 WGNNGYGQLGNGSTAHRATPVQVPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQ 251
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +S P+ + GL +VV ++ G HS A+ DG ++ WG N GQLG
Sbjct: 252 LGNGTTV-HSPTPVPVPGLS-QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 309
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +VE L + A GF S+AV GG + SWG SG+LG+G SS
Sbjct: 310 RTKP--GRVEGLREVVA--VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS------ 359
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L V AAG +HS + +G V+ +G ++ + P
Sbjct: 360 ---SARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 414
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L V G YH+ + +GG L+ WG N+ G LG
Sbjct: 415 RVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLG 453
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG G+ +R P + A+A GG+H L L G V+A G N +GQL
Sbjct: 145 GSNSAGQLGNGTTAARSAPRPVPGLSR--AVAVAAGGSHALALCADGTVWAWGNNGYGQL 202
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + + + P+++ GL+ VV ++ GY HS A+ DG ++ WG N GQLG G
Sbjct: 203 G-NGSTAHRATPVQVPGLQG-VVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNGTTVHS 260
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P+P V LS + + AA GF S+A+ G V +WG G G+LG S
Sbjct: 261 PTPVP--VPGLSQVVSV-AAGGFH-SLALCADGTVWAWGNNGFGQLGEAV---------S 307
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
T P ++ L +V A GF HS + G ++ +G+ ++ + + RP+
Sbjct: 308 TQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAP 365
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L V GG H+ + + G ++ WG NE G LG
Sbjct: 366 VQGLGAVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLG 403
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 17/266 (6%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
S+ R A ++ ++A+A G ++L L G V+A G N GQLG S P
Sbjct: 107 SKHRATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARS-APRP 165
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+ GL + V ++ G H+ A+ DG ++ WG N GQLG G A + P+ +V L G+
Sbjct: 166 VPGLSRAVA-VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPV--QVPGLQGV 222
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
A G+ S+A+ G V +WG G+LG+G + TP + L
Sbjct: 223 VA--VAGGYMHSLALCADGTVWAWGFNDYGQLGNGT---------TVHSPTPVPVPGLSQ 271
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
V V +AA GF HS + +G V+ +G+ ++ +P + L V G
Sbjct: 272 V-VSVAAGGF-HSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGF 329
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
YH+ + +GG L++WG+N +G LG G
Sbjct: 330 YHSLAVRAGGSLWSWGNNYSGQLGNG 355
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG GS S RP ++ ++A GG H++ + G V+A G N+ GQ
Sbjct: 344 WGNNYSGQLGNGSFSSSARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQ 401
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG E P+R+ GL+ EV ++ G++HS ++ G L+ WG N GQ LG A
Sbjct: 402 LG-HERAPERATPVRVPGLQGEVA-VAAGFYHSLSVQAGGSLWAWGLNDFGQ--LGDSEA 457
Query: 163 KVIPIPTK 170
++P+P
Sbjct: 458 PLMPVPAP 465
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 133/273 (48%), Gaps = 13/273 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G GD G+LG+G P S + +A HT FLT+ G VY TG ND GQL
Sbjct: 8 GRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQL 67
Query: 104 GISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + + P+R++ L +V I+ G+ H+ A+T G L WG + GQLG
Sbjct: 68 GV-RGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNI 126
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P V+ + + A G ++A+TG G V S+G G SG LGHG L
Sbjct: 127 VDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGN-------LD 179
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S TP L+K L G+ V A G HSA + +G+V+ +G ++ + + P
Sbjct: 180 GCS--TPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPV 237
Query: 283 LISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+ L + ++ CGG HT +TS G L++WG
Sbjct: 238 AVKALVDHDVIQIACGGDHTLAITSDGRLFSWG 270
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 142/287 (49%), Gaps = 25/287 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ D G+LG+ +E + P+ +A + H + +ACG HT+ +TETG + + G +++GQL
Sbjct: 60 GSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQL 119
Query: 104 GI-SENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G S NI ++P + G + +++ G +H+ A+T G++Y +G S+G LG G
Sbjct: 120 GFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD 179
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ V+ L G+ Q A G S A+T GKV +WG G G+LGHG +I
Sbjct: 180 G--CSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNI---- 233
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P +K L V A G H+ I +GR++ +G L+ + H +
Sbjct: 234 -----KLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWG-----HGLWGQTGHGTKE 283
Query: 282 SLISKLPYSE-------EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++S + +V G HT VL GE+Y WG E LG
Sbjct: 284 DVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 41 ALWGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A WG +YG+LG G++ +P + +A GG HTL LT +G VY+ G
Sbjct: 109 ASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDG 168
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG G S L S V QI+ G +HS+A+TVDG+++ WG+ GQLG G
Sbjct: 169 SSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + I +P V+ L Q A G + ++A+T G++ SWG G G+ GHG + +L
Sbjct: 229 --STQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVL 286
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+P+ + +LEG + +AG H+ + + G VY +GD
Sbjct: 287 ---------SPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGD 323
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWG 148
VYA G D GQLGI + YS P S + K++V I+ +H++ +T +GE+Y G
Sbjct: 4 VYALGRGDLGQLGIGD---YSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTG 60
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N GQLG+ +V+PI +V L A GF+ +VAVT G + SWG G+
Sbjct: 61 SNDAGQLGVRGMEEQVVPI--RVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQ 118
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG + + G PR++K + AAG H+ + +G VY FGD +
Sbjct: 119 LGFDSGNIVDGV-------QPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSG 171
Query: 269 KMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + PSL+ L ++ CG H+ LT G+++TWG + G LG G
Sbjct: 172 ALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG GS ++ PV A H + +ACGG HTL +T G +++ G +GQ
Sbjct: 217 WGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQ 276
Query: 103 LG--ISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G E++ L P ++ L+ V VQ+S G H+ + GE+Y WG QLG
Sbjct: 277 TGHGTKEDV---LSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 150/290 (51%), Gaps = 21/290 (7%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG+ G+LG+ ++ ++ R V C ++ +L ACG H+L L G V++ G N
Sbjct: 5 WGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCGNN 64
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG + P +I L+ +++V +S G HS AI +G ++ WG S+GQLG+
Sbjct: 65 SCGQLGRKRCQKHG-RPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGI 123
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ K+ IP K++ LS Q + G S+A+ G+V SWG G+LG G+
Sbjct: 124 -REFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGE---- 178
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF----Q 273
S+ +P+ +K L+G+ + AAG HS + +G Y +G ++ +
Sbjct: 179 ----NVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKE 234
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+P I +L + + CG HT VLT G+++T+GSN++G LG
Sbjct: 235 SAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLG 284
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 139/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN G+LG + RP A E + +++CG H+L + + G V++ G GQL
Sbjct: 62 GNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQL 121
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A+ DG ++ WGKN++GQLGLG+
Sbjct: 122 GIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVP 181
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P V+ L GI Q A G S A++ G WG +G+L ++ G
Sbjct: 182 SQAS-PQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQL------ALSGKKE 234
Query: 223 STSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
S + + P I EL+ ++V + G H+A + ++G+V+ FG ++ Q + + P
Sbjct: 235 SAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGP 294
Query: 282 SLISKLPYSEEVVCGGYHTCVLT-SGGELYTWG 313
++ ++ CG YHT + + G++ ++G
Sbjct: 295 QVVDSAVSFSQIACGSYHTLAYSCTTGQVISFG 327
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 19/239 (7%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWG 148
Y G N GQLGI +R S + ++Q + G HS + DG ++ G
Sbjct: 3 YCWGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCG 62
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
NS GQLG +K + P +++ L + G E S+A+ G+V SWG+G G+
Sbjct: 63 NNSCGQLG--RKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQ 120
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG I F + +S P+ I EL K+ + G HS + ++GRV+ +G
Sbjct: 121 LG------IREFKKLSS--IPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHG 172
Query: 269 KMLFQEGNHAR-RPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ E ++ P + L P + +V GG H+ L+ G Y WG N G L +
Sbjct: 173 QLGLGENVPSQASPQWVKSLDGIPLA-QVAAGGAHSFALSFSGTSYGWGRNNAGQLALS 230
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 142/285 (49%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG ++GQ+G+
Sbjct: 64 GQLGHDKS---RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A I +P ++ LS I Q A G S+A++ + SWG G+LG G E
Sbjct: 120 IAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E PR IK L G+ AAG HS + +G ++ +G ++ +
Sbjct: 177 -----KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRS 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S++++ CG HT LT G ++T+G+ G LG
Sbjct: 232 DPALLKSL-RSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G GQ+
Sbjct: 59 GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ + +Y WG+N GQLGLG +
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KE-SAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 228 -TDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPR 286
Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L ++ CG HT + S G +Y++G NG LGIG
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIG 330
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLGS + + P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ S L S ++++ I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSAS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEV--NPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSN 334
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+ A + G +Y +G NGQLG+G
Sbjct: 274 LG-HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGST 332
Query: 161 AAKVIP 166
+ K P
Sbjct: 333 SNKKSP 338
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 139/284 (48%), Gaps = 17/284 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG GQ+GL
Sbjct: 64 GQLGHDKS---RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + I +P ++ LS + Q A G S+A++ + SWG G+LG G
Sbjct: 120 TAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L E PR IK L G+ AAG HS + +G ++ +G ++ +
Sbjct: 173 -LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRN 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L + + CG HT LT G ++T+G+ G LG
Sbjct: 232 VPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G +GQ+
Sbjct: 59 GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ D +++ WG+N GQLGLG +
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KECA-PRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ NH P
Sbjct: 228 -TDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG ++ P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ ++ L S ++++ I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G
Sbjct: 281 HEV--NPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+ A + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ P K
Sbjct: 333 INRKSPFTVK 342
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 143/288 (49%), Gaps = 23/288 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G + R P SA + + + CG HT+ +E+G VY+ G DFG
Sbjct: 38 WGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFG 97
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ L P I L+ ++ QI+ G H A+T+D ++ WG+N NG+LGLG
Sbjct: 98 RLGHGDHSDL-LIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTA 156
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ I K A G E SVA+T G + WG G G LG G +
Sbjct: 157 EDSL--LPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRND---- 210
Query: 221 LRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
RL+ E ++G K+ + A G+ H+ C+ +G +Y G ++ +
Sbjct: 211 ---------RLLPEKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFED 261
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + +V G H+ LTS G+L WG N+ G +G+G
Sbjct: 262 HLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVG 309
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 131/285 (45%), Gaps = 18/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G P A + ++ +ACG +H L +T V + G N G+
Sbjct: 91 WGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGE 150
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ SL P +I ++ + ++ G HS AIT DG LY WG G LGLG +
Sbjct: 151 LGLG-TAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRN 209
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+++P V+ G A G+ ++ V+ G + + G G G+LGHG L
Sbjct: 210 DRLLPEKVTVD---GDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHL--- 263
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
PR ++ L + + G+ HS + +G++ +G ++ P
Sbjct: 264 ------VPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSP 317
Query: 282 SLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ P+ ++V CG HT +T +Y+WG NG LG G
Sbjct: 318 MQVN-FPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNG 361
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 5/172 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P + + + +ACG HT+ ++ +G +Y G +GQ
Sbjct: 195 WGWGRYGNLGLGDRNDRLLPEKVT-VDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQ 253
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + + Q+S G+ HS A+T G+L WG N GQ+G+G
Sbjct: 254 LGHGDFEDH-LVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNF 312
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
P+ +V + + G+ ++AVT V SWG G +G+LG+G+
Sbjct: 313 DCCSPM--QVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGE 362
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ + V+ +S G HS A+ + WG+ +GQLG G ++ PTK+ L G
Sbjct: 8 EVAAPPRRVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRL--FPTKLSALDG 65
Query: 177 IFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + ++A + G+ V SWG G GRLGHG S +L P IK L
Sbjct: 66 QDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLL---------IPHPIKAL 116
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEE 292
+G+ ++ A G H + + +V +G ++ + P I ++P +
Sbjct: 117 QGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPI-KM 175
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V G H+ +T G LY WG G LG+G
Sbjct: 176 VAAGAEHSVAITKDGNLYGWGWGRYGNLGLG 206
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G G YG+LG G E P A + ++ G H++ LT +G + G N FGQ+
Sbjct: 247 GWGKYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQI 306
Query: 104 GISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ N P++++ + VQ IS G+ H+ A+T +Y WG+ +NGQLG G+
Sbjct: 307 GVGNNFD-CCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETID 365
Query: 163 KVIPIPTKVECLS 175
+ +PT +E S
Sbjct: 366 R--NVPTIIEAFS 376
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G++G+G+ P+ + ++ ++CG HT+ +TE VY+ G GQ
Sbjct: 298 WGWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQ 357
Query: 103 LG----ISENIGYSLEPLRISGLKKEVVQISTGY 132
LG I N+ +E + G + ++ S Y
Sbjct: 358 LGNGETIDRNVPTIIEAFSVDGSSGQHIESSKPY 391
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 10/277 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG RP + A E + ++CG H+L + G V+A G GQL
Sbjct: 46 GDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E P +I L +++Q+S G++HS A++ DG++Y WGKNS GQLGLGK+
Sbjct: 106 GIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFP 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 166 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQL------ALSGNNT 218
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + +NG+V+ FGD + ++ + R P
Sbjct: 219 PVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQ 278
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWGSNEN 317
+ + ++ CG YHT + + GE+ ++G N
Sbjct: 279 QVEGIDGLVSQIDCGSYHTLAYVYTTGEVVSFGRGRN 315
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 127/256 (49%), Gaps = 18/256 (7%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTG 131
++ ACG H+L L G V++ G N GQLG P I L+ +V +S G
Sbjct: 23 VRQAACGERHSLLLLSDGTVHSCGDNTQGQLG-RRGKPREERPGLIKALETLLVGLVSCG 81
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+ + K+ P K++ L+GI Q + G S+A
Sbjct: 82 KEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIF-TPKKIKTLTGIKIIQVSCGHYHSLA 140
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS
Sbjct: 141 LSEDGQVYSWGKNSQGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSF 192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV---CGGYHTCVLTS 305
+ +G + +G ++ N +P I L S +V+ CG HT VLT
Sbjct: 193 ALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALK-SLDVIYISCGYEHTAVLTQ 251
Query: 306 GGELYTWGSNENGCLG 321
G+++T+G N G LG
Sbjct: 252 NGKVFTFGDNSCGQLG 267
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
EV Q + G HS + DG ++ G N+ GQLG K + P ++ L + +
Sbjct: 22 EVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPRE--ERPGLIKALETLLVGLVS 79
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG + + +TP+ IK L G+K+
Sbjct: 80 CGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKI--------FTPKKIKTLTGIKIIQV 131
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + E+G+VY +G + ++ F +R + +P ++ V GG H
Sbjct: 132 SCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 190
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 191 SFALSLSGTSFGWGSNNTGQLALS 214
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G +QAA G S+ + G V S G G+LG + E P LIK L
Sbjct: 20 GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPR---------EERPGLIKAL 70
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISKLPYSE--E 292
E + V + + G HS + GRV+ +G + ++ +E P I L + +
Sbjct: 71 ETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQ 130
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V CG YH+ L+ G++Y+WG N G LG+G
Sbjct: 131 VSCGHYHSLALSEDGQVYSWGKNSQGQLGLG 161
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFGQ 102
G G+ G+LG G E R P + A + +ACG HT + T +Y+ G DFG+
Sbjct: 30 GRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGR 89
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N P I L+ E+ QI+ G H A+T DGE+Y WG+N NGQLGLG
Sbjct: 90 LG-HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTD 148
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P K+ G+ K A G E + AVT GK+ WG G G LG G +
Sbjct: 149 DSL--VPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRM--- 203
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + + K+ + A G+ H+ + ++G++Y +G ++ + P
Sbjct: 204 ------LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLP 257
Query: 282 SLISKLP-YSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
++ L ++ V GG+ HT LT G+LY WG N+ G +G G
Sbjct: 258 HQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSG 301
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 140/285 (49%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + ++ +ACG +H L +T G VY+ G N GQ
Sbjct: 82 WGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQ 141
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P ++ + V+ ++ G H++A+T G+LY WG G LGLG +
Sbjct: 142 LGLGDTDD-SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRG 200
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V + A G+ ++AV+ GK+ ++G G+LGHG + L
Sbjct: 201 DRM--LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL--- 255
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + L + + G+ H+ + E G++Y +G ++ + + P
Sbjct: 256 ------LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSP 309
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
LIS + VV CG HT +T +Y+WG +G LG G
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHG 354
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 120/260 (46%), Gaps = 32/260 (12%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
++ G +HT+ L V + G + GQLG + L P I L E+ ++ G H
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAED-RLLPRIIGALNDCEISLVACGADH 68
Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
++A + +Y WG G+LG G + +P P K L G+ +Q A G +AVT
Sbjct: 69 TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK--ALQGLEIRQIACGDSHCLAVT 126
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG +G+LG G L P + EGV VK+ AAG H+A +
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSL---------VPHKLLAFEGVSVKMLAAGAEHTAAV 177
Query: 254 DENGRVYIF----------GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
++G++Y + GDR D+ML E + V CG HT +
Sbjct: 178 TDSGKLYGWGWGRYGNLGLGDRG-DRMLPAEVPAVGDEKMCM-------VACGWRHTIAV 229
Query: 304 TSGGELYTWGSNENGCLGIG 323
+ G+LYT+G ++ G LG G
Sbjct: 230 SQSGKLYTYGWSKYGQLGHG 249
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G P +A + ++ ++ G HT+ LTE G +Y G N FGQ+G S
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVG-SG 301
Query: 108 NIGYSLEP--LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
++ P + I G + VVQ+S G+ H+ A+T +Y WG+ ++GQLG G +
Sbjct: 302 DVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDR-- 359
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
P ++ LS + L AVTG G V +W
Sbjct: 360 SAPKGIQALSADGSACEGLEKSPEPAVTGSG-VANW 394
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 142/285 (49%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG GQ+GL
Sbjct: 64 GQLGHDKS---RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + I +P ++ LS + Q A G S+A++ + SWG G+LG G
Sbjct: 120 TAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
L E PR IK L G+ AAG HS + +G ++ +G ++ +
Sbjct: 173 -LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRN 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S++++ CG HT LT G ++T+G+ G LG
Sbjct: 232 VPALLKSL-RSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G +GQ+
Sbjct: 59 GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ D +++ WG+N GQLGLG +
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KECA-PRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ NH P
Sbjct: 228 -TDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG ++ P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ ++ L S ++++ I G H++A+T +G ++ +G GQLG
Sbjct: 221 QLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G
Sbjct: 281 HEV--NPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+ A + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ P K
Sbjct: 333 INRKSPFTVK 342
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 136/297 (45%), Gaps = 29/297 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +YG L LG + S F S++++A G + L + G V+ GLN GQ
Sbjct: 3139 GQNNYGELCLGHCNPTNKLERASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGLNKSGQC 3198
Query: 104 GISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GI + P I SG+ +V S G H AI+ DG +Y WG N GQLGLG
Sbjct: 3199 GIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTT 3258
Query: 161 AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
+K P +E L F AA+ + S V+ G +L++G SG+LG H Q
Sbjct: 3259 VSKS-HTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQH--- 3314
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
++TP+L++ L KV A G H+ I ++G VY FG ++ +
Sbjct: 3315 --------QHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQN 3366
Query: 278 ARRPSLISKLPYSE-----------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P L+ P +V CG YHT + G++ TWG N+ G LGIG
Sbjct: 3367 TKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIG 3423
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 17/286 (5%)
Query: 49 GRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
G+ G+G+ + R P+ + ++ A + G H L ++ G VY+ G ND GQLG+
Sbjct: 3196 GQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGL 3255
Query: 106 SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ S P I L+++ + + YHHS+ ++ +G+L +G N +GQLGL +
Sbjct: 3256 GTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQ 3315
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSILGFL 221
P VE LS + A G +VA+ G V S+G G+LG H Q + + +
Sbjct: 3316 --HTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLV 3373
Query: 222 R-STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ + TP L + V+V G+ H+ I E G+V +G ++ H
Sbjct: 3374 KIPPAPRTPMLDAVNKAVQV---YCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSI 3430
Query: 281 PSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ LP + V CG YHT +L G +G N G LG+
Sbjct: 3431 AQFV-PLPLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLGVA 3475
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 127/282 (45%), Gaps = 24/282 (8%)
Query: 49 GRLGLGSLESR---WRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G G+ + R RP+ A H +K + + G H + +T+TG Y+ G ND GQL
Sbjct: 411 GQCGHGNFDERVMLLRPI--QALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQL 468
Query: 104 GISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G EN+G L P I +K K++ + YHHS+ ++V GELY +G N GQLGL
Sbjct: 469 G-HENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQ 527
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P V+ L G + G V T G+V + G G+LG G +
Sbjct: 528 HQ--STPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQV---- 581
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + L V A G+ H+ I G Y FG ++ H P
Sbjct: 582 -----KVPTQVV-LPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIP 635
Query: 282 SLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ + V CG YHT +++ G+++ +G N G LG
Sbjct: 636 IALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLG 677
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 15/239 (6%)
Query: 90 GCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
G +Y+ G N +G+LG+ ++I + L + + G + Q+ +G + +T DG + G
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWD-HIRQVVSGNEILAILTSDGVVLTCG 406
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGS 206
N +GQ G G +V+ + ++ L K A+ G E +A+T G SWG
Sbjct: 407 LNKSGQCGHGNFDERVMLL-RPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + L Y P+LI+ ++ K+K AA + HSA + +G +Y FG
Sbjct: 466 GQLGHENVGTKL--------YLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMND 517
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ H P L+ L + V CG YH + T GE++T G N++G LG+G
Sbjct: 518 CGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLG 576
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 125/299 (41%), Gaps = 44/299 (14%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHT----------LFLTETGCV 92
G YG LGLG E+H L ++ CG H LT G V
Sbjct: 354 GQNSYGELGLGD-----------DIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVV 402
Query: 93 YATGLNDFGQLG---ISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
GLN GQ G E + L P++ + + + + S G H AIT G Y WG
Sbjct: 403 LTCGLNKSGQCGHGNFDERVML-LRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWG 461
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N GQLG K+ +P +E + K AA+ + S V+ G++ ++G G+
Sbjct: 462 YNDRGQLGHENVGTKLY-LPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQ 520
Query: 209 LG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
LG H Q S TP+L+K L G V + + G H +G V+ G
Sbjct: 521 LGLDHTQHQS-----------TPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKND 569
Query: 267 VDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + P+ + LP V CG YH +TS G Y++G N+ G LGIG
Sbjct: 570 HGQLGLGHNKQVKVPTQVV-LPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIG 627
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+LGLG+ S+ V+ S EK+ + A H+ ++ G + G+ND
Sbjct: 3245 WGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDS 3304
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ + P + L + V +++ G +H+ AI DG++Y +GKN GQLGL
Sbjct: 3305 GQLGL-DHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSH 3363
Query: 160 KAAKVIPIPTKV------ECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+P+ K+ L + Q G+ +V + GKV++WG G+LG G
Sbjct: 3364 TQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIG 3423
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ +S +++ P + +VK A+ G H+ + NGR +FG
Sbjct: 3424 SKEH-----KSIAQFVPLPLTS----RVKRASCGCYHTLLLLVNGRPMVFG 3465
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 127/264 (48%), Gaps = 18/264 (6%)
Query: 1 MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESR- 59
ML R + A+ + +K + + G C+ I+ T A WG D G+LG ++ ++
Sbjct: 423 MLLRPIQALRSHRVKY---INASNG-CEHLIAIT-DTGLAYSWGYNDRGQLGHENVGTKL 477
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+ P + + ++ +K+ A H+ ++ +G +Y G+ND GQLG+ S L +
Sbjct: 478 YLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKA 537
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L V +S G +H T+ GE++ GKN +GQLGLG K + +PT+V L
Sbjct: 538 LLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHN--KQVKVPTQV-VLPNELV 594
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G+ + A+T G S+G G+LG G + + P + +
Sbjct: 595 CFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSK---------IHQNIPIALTISSNTR 645
Query: 240 VKIAAAGFLHSACIDENGRVYIFG 263
+ AA G H+ + ++G+V++FG
Sbjct: 646 MVHAACGCYHTLLMSDSGQVFVFG 669
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D G+LGL + + P + + +ACG HT+ + + G VY+ G N++GQ
Sbjct: 3299 FGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQ 3358
Query: 103 LGISENIGYSLEPL-------RISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
LG+S + L R L + VQ+ GY+H+ I G++ WG+N G
Sbjct: 3359 LGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYG 3418
Query: 154 QLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
QLG+G K A+ +P+P K+A+ G ++ + G+ + +G G+L
Sbjct: 3419 QLGIGSKEHKSIAQFVPLPLTSR------VKRASCGCYHTLLLLVNGRPMVFGRNNKGQL 3472
Query: 210 GHGQES 215
G S
Sbjct: 3473 GVASRS 3478
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D+G+LGLG + P + +ACG H +T TG Y+ G ND+GQL
Sbjct: 566 GKNDHGQLGLGHNKQVKVPTQV-VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQL 624
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
GI I ++ +V + G +H+ ++ G+++++G+N+ GQLG
Sbjct: 625 GIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDS 684
Query: 164 VIPIPTKV 171
++P+P KV
Sbjct: 685 LLPVPLKV 692
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 94/243 (38%), Gaps = 60/243 (24%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA----ALGFEQSV 190
SS + + E++ G+N+ G+L LG PT + F+ ++ A G E V
Sbjct: 3126 SSPMFEECEIFSCGQNNYGELCLGHCN------PTNKLERASFFSYKSIQSIAGGNEVLV 3179
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQ-------ESSI-------------------------- 217
+ G V + G SG+ G G S I
Sbjct: 3180 VLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHD 3239
Query: 218 -------------LGFLRSTSE-YTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIF 262
LG + S+ +TPR+I+ L E + AA + HSA + NG + F
Sbjct: 3240 GAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTF 3299
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
G ++ H P L+ L + V CG YHT + G++Y++G NE G L
Sbjct: 3300 GMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQL 3359
Query: 321 GIG 323
G+
Sbjct: 3360 GLS 3362
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 17/282 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G ++ + P A + ++ACG HTL T G ++A G N GQ
Sbjct: 87 WGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQ 146
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G+ +I LEP ++ L+ KEVV ++ G HS +T +GE+Y WG G +G G+
Sbjct: 147 CGLG-SIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGESQ 205
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +PT + L G+ Q G+ S+AV GG + +WG G +L G
Sbjct: 206 DR--HLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKD----- 258
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
Y P+ ++ ++ +V A G+ H+ D GR++ G + R
Sbjct: 259 ----HYVPKRVEAVQ--QVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRV 312
Query: 282 SLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L +V G HT +T G+ ++WG N NG LG
Sbjct: 313 QQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLG 354
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 129/283 (45%), Gaps = 14/283 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
WG G+ G+LG G E R P + ++ CG +++ + VY+ G DFG
Sbjct: 34 WGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWGDFG 93
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ P + L + V ++ G H+ T +G+L+ +G+N NGQ GLG
Sbjct: 94 RLGTG-DVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLG-- 150
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P V L G A G E S+ VT G+V WG G G +G G+
Sbjct: 151 SIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGE------- 203
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S + P L K LEGVKV G+ HS +DE G +Y +G A +++ +
Sbjct: 204 --SQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYV 261
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + + V G HT S G L+ G N+ G G+G
Sbjct: 262 PKRVEAVQQVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVG 304
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 17/244 (6%)
Query: 76 LACGGAHTLFLTET---GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
LACG +H+L L T V + G + GQLG + S L + + G
Sbjct: 12 LACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGA 71
Query: 133 HHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+S A+ D ++Y WG G+LG G K + IP + L+G A G ++
Sbjct: 72 EYSMAVAGGDKQVYSWGWGDFGRLGTGD--VKDVFIPCPLPALAGRRVASVACGDTHTLV 129
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
T G++ ++G +G+ G LG ++ E P+L+ L+G +V A G HS
Sbjct: 130 ATAEGQLFAFGRNQNGQCG-------LGSIQDCLE--PQLVTALQGKEVVAVACGAEHSM 180
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
C+ G VY +G + E P+L L +V CG H+ + GG +
Sbjct: 181 CVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAM 240
Query: 310 YTWG 313
YTWG
Sbjct: 241 YTWG 244
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG +G G + R P + E + + CG H++ + E G +Y G + Q
Sbjct: 191 WGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQ 250
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + + + P R+ ++ +V ++ G+ H+ A G L+ G N GQ G+G
Sbjct: 251 LMQGDRKDHYV-PKRVEAVQ-QVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHNE- 307
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
V+ + +VE L+G Q G++ ++AVT GK SWG +G+LGH
Sbjct: 308 DVVRV-QQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGH 355
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 145/286 (50%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG G ++ P + + + + CG HT ++ G ++ G +G+
Sbjct: 31 WGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGMYGK 90
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG G+S P R+ L VV I+ G H++ +T G LY WG NG G G
Sbjct: 91 LGHGNESGHS-TPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTE 149
Query: 162 AKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P +E LSG Q +A GF +T G+V +WG G GRLGHG E +
Sbjct: 150 GHQY-TPKLLERLSGKRVVQLSACGFHTG-CLTDAGEVYTWGEGKFGRLGHGAERNC--- 204
Query: 221 LRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
++PRL++ L G + V+I+ GF HSA + +G++Y FG ++ + +
Sbjct: 205 ------HSPRLVETLLGKRPVQISCGGF-HSAVVTADGKMYTFGGGEHGQLGHGDKVNKV 257
Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+P+L+ L + ++ CG H+ LTS E+YTWG+ ++G LG G
Sbjct: 258 KPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHG 303
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 123/256 (48%), Gaps = 17/256 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG G+ P + ++ +ACG HT +T GC+Y G + G
Sbjct: 83 WGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGV 142
Query: 103 LGISENIGYSLEPL---RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G + G+ P R+SG K VVQ+S H+ +T GE+Y WG+ G+LG G
Sbjct: 143 AGHGDTEGHQYTPKLLERLSG--KRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHG- 199
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + P VE L G Q + G S VT GK+ ++G G G+LGHG +
Sbjct: 200 -AERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDK----- 253
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
++ P L+K+L+GV + G+ HS + + VY +G+ K+ G
Sbjct: 254 ----VNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVS 309
Query: 280 RPSLISKLPYSEEVVC 295
P L+ KL ++VVC
Sbjct: 310 TPQLVEKL-VGQKVVC 324
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 124/241 (51%), Gaps = 16/241 (6%)
Query: 87 TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELY 145
T G VY G D G+LG +N G+ P L +V+ ++ G +H++A++ G L+
Sbjct: 23 THGGGVYTWGRGDDGRLGHGDN-GWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLF 81
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
WG G+LG G ++ P +V+ L G+ A G + VT G + +WG
Sbjct: 82 TWGGGMYGKLGHGNESGH--STPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKE 139
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGD 264
+G GHG +YTP+L++ L G + V+++A GF H+ C+ + G VY +G+
Sbjct: 140 NGVAGHGDTEG--------HQYTPKLLERLSGKRVVQLSACGF-HTGCLTDAGEVYTWGE 190
Query: 265 RAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ + P L+ L ++ CGG+H+ V+T+ G++YT+G E+G LG
Sbjct: 191 GKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGH 250
Query: 323 G 323
G
Sbjct: 251 G 251
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 109/218 (50%), Gaps = 12/218 (5%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ + G G G E ++ P + + L+ G HT LT+ G VY G FG
Sbjct: 135 WGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFG 194
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG L + L K VQIS G HS+ +T DG++Y +G +GQLG G K
Sbjct: 195 RLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKV 254
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
KV P T V+ L G+F Q G+ SVA+T +V +WG G G+LGHG +
Sbjct: 255 NKVKP--TLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKV---- 308
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
TP+L+++L G KV A+ H+AC+ E V
Sbjct: 309 -----STPQLVEKLVGQKVVCVASYNEHTACLVEPHSV 341
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 142/285 (49%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P C F +++ + CG HT F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G+++ WG ++GQ+G+
Sbjct: 64 GQLGHDKS---RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVS- 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A I +P ++ LS I Q A G S+A++ + SWG G+LG G E
Sbjct: 120 IAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E PR IK L G+ AAG HS + +G ++ +G ++ +
Sbjct: 177 -----KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRS 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S++++ CG HT LT G ++T+G+ G LG
Sbjct: 232 DPALLKSL-RSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 138/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + + A++CG AHTL L + G V++ G GQ+
Sbjct: 59 GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ + +Y WG+N GQLGLG +
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ LSGI A G S A+T G + WG G+LG E
Sbjct: 177 KE-SAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 228 -TDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPR 286
Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L ++ CG HT + S G +Y++G NG LGIG
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIG 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLGS + + P + +A GG H+ LT +G ++ G N FG
Sbjct: 161 WGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ S L S ++++ I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSAS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEV--NPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSN 334
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+ A + G +Y +G NGQLG+G
Sbjct: 274 LG-HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGST 332
Query: 161 AAKVIP 166
+ K P
Sbjct: 333 SNKKSP 338
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 136/261 (52%), Gaps = 9/261 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + R RP + A E ++ L+CG H+L + G V+A G GQL
Sbjct: 46 GDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P+++ L +++Q+S G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 106 GIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFL 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V+ L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 166 SQ-ESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------ALSGNNV 218
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y PR I L+ + V + G H+A + ++G+V+ FGD + ++ R P
Sbjct: 219 PVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQ 278
Query: 283 LISKLP-YSEEVVCGGYHTCV 302
L+ + ++ CG YHT V
Sbjct: 279 LVEGIDGLVSQIDCGSYHTLV 299
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 16/257 (6%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
L+ A G H+L L G V+A G N GQLG + + P I L+ V +S G
Sbjct: 23 LRQAASGERHSLLLLSDGTVHACGDNSCGQLG-RRGVPHRKRPGLIQALETLNVDLLSCG 81
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ ++ P KV+ L+GI Q + G S+A
Sbjct: 82 KEHSLAVCHKGRVFAWGAGSEGQLGIGE-FKELNFTPMKVKALAGIKIIQVSCGHYHSLA 140
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG G+LG G+E FL S+ +P+ +K LEG+ + AAG HS
Sbjct: 141 LSQDGQVFSWGNNSHGQLGLGKE-----FL---SQESPQRVKSLEGIPLAQVAAGGAHSF 192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSG 306
+ +G + +G ++ N + +P I L + CG HT VLT
Sbjct: 193 ALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQD 252
Query: 307 GELYTWGSNENGCLGIG 323
G+++T+G N +G LG G
Sbjct: 253 GKVFTFGDNSSGQLGHG 269
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P+ A + ++CG H+L L++ G V++
Sbjct: 93 RVFA--WGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSW 150
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 151 GNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 210
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + +P+ P + L + + G E + +T GKV ++G SG+LG
Sbjct: 211 LAL---SGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLG 267
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
HG + G P+L++ ++G+ +I + + VY++ R V
Sbjct: 268 HGPTAEKRG---------PQLVEGIDGLVSQIDCGSY--------HTLVYVYTTRQV 307
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + DG ++ G NS GQ LG++ P ++ L + +
Sbjct: 22 ELRQAASGERHSLLLLSDGTVHACGDNSCGQ--LGRRGVPHRKRPGLIQALETLNVDLLS 79
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ + +TP +K L G+K+
Sbjct: 80 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEL--------NFTPMKVKALAGIKIIQV 131
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++G+V+ +G+ + ++ F +R + +P + +V GG H
Sbjct: 132 SCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLA-QVAAGGAH 190
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 191 SFALSLSGTSFGWGSNNAGQLALS 214
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 90/169 (53%), Gaps = 6/169 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +G+LGLG S+ P + E L +A GGAH+ L+ +G + G N+ G
Sbjct: 150 WGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 209
Query: 102 QLGISEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N S +P I LK+ VV IS G H++ +T DG+++ +G NS+GQLG G
Sbjct: 210 QLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHG 269
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
A K P VE + G+ ++ + V V +V+S+G G S
Sbjct: 270 PTAEKR--GPQLVEGIDGLVSQIDCGSYHTLVYVYTTRQVISFGRGPSD 316
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 151/303 (49%), Gaps = 32/303 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LGL + + + P +K + G + ++ LT G VY+ G N G
Sbjct: 54 WGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGI 113
Query: 103 LGISENIGYSL-EPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK- 159
LG + + +++ +P RI L K++ QIS G H +A+T DGE+Y WG G+LG +
Sbjct: 114 LGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEE 173
Query: 160 -KAAKVIPI---------------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
K + I I P K+E L I KQ A G + +V ++ GKV ++G
Sbjct: 174 LKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGY 233
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G LG+ + + S TP+LIK+L + VKI +AG+ A I + G++Y +G
Sbjct: 234 NQYGSLGYVSDQN--------SVTTPQLIKDLNDI-VKI-SAGYSFCAAITKQGKLYTWG 283
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCL 320
+ ++ + + +PS+++ +V CG LT G+LYTWG +G L
Sbjct: 284 NNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQL 343
Query: 321 GIG 323
G G
Sbjct: 344 GHG 346
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 129/290 (44%), Gaps = 41/290 (14%)
Query: 43 WGNGDYGRLGLGS-------------------LESRWRPVVCSAFEKHSLKALACGGAHT 83
WGN ++G+LG L+ P + K +ACG T
Sbjct: 160 WGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFT 219
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
+ L+E G VY G N +G LG + P I L ++V+IS GY +AIT G+
Sbjct: 220 VVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLN-DIVKISAGYSFCAAITKQGK 278
Query: 144 LYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
LY WG N NGQLG + + P I T + I F A+T G++ +WG
Sbjct: 279 LYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNF--IAALTQQGQLYTWG 336
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
GG G+LGHG +S + Y PR + E + +KIA G H+A I E+ ++Y F
Sbjct: 337 FGGDGQLGHGNKSDL---------YAPRHV-EFKQKIIKIACGG-SHAAFITEDNQLYQF 385
Query: 263 -----GDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTS 305
G + + + E + P+L+ + +V CGG HT +T
Sbjct: 386 GRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQ 435
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 113/242 (46%), Gaps = 13/242 (5%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKN 150
VY+ G FGQLG+ Y P I L K++ ++ G S A+T +GE+Y WGKN
Sbjct: 51 VYSWGYGGFGQLGLQNENNY-YTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G LG + + + P ++E L G KQ + G AVT G+V +WG G+LG
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169
Query: 211 H----GQESSI------LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
H QE I L P+ I+ L +K K A G + + E+G+VY
Sbjct: 170 HEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVY 229
Query: 261 IFGDRAVDKMLF-QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
FG + + + N P LI L ++ G +T G+LYTWG+N NG
Sbjct: 230 TFGYNQYGSLGYVSDQNSVTTPQLIKDLNDIVKISAGYSFCAAITKQGKLYTWGNNRNGQ 289
Query: 320 LG 321
LG
Sbjct: 290 LG 291
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 29 RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
+I++ Q+ WG G G+LG G+ + P K + +ACGG+H F+TE
Sbjct: 321 NFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEF--KQKIIKIACGGSHAAFITE 378
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE----PLRISGLK-KEVVQISTGYHHSSAITVD 141
+Y G GQLGI +N+ P + K K+VV ++ G H+ AIT +
Sbjct: 379 DNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G V++ G GQ+
Sbjct: 43 GCNDLGQLGHD--KSRKKPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 100
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S Y P I L ++VQ++ G+HHS A++ + ++Y WG+N GQLGLG +
Sbjct: 101 GLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIK 160
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L+GI A G S A+T G + WG G+LG E
Sbjct: 161 KE-SAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDE-------- 211
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P L+K L K+ G H+A + + G V+ FG ++ NH P
Sbjct: 212 -TDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 270
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 271 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTG 314
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 130/265 (49%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P C F +++ + CG HT+F+ + G VY G ND GQLG ++ +P ++
Sbjct: 8 EPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS---RKKPDQVGA 64
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V +S G H+ A+ G+++ WG ++GQ+GL A I +P ++ L I
Sbjct: 65 LDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLS-VAEDYIRVPRNIKSLYDIQI 123
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S+A++ + SWG G+LG G E E PR IK L G+
Sbjct: 124 VQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIK--------KESAPRHIKSLAGIP 175
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
AAG HS + +G ++ +G ++ + P+L+ L S++++ CG
Sbjct: 176 FAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSL-RSQKIIHICCG 234
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT LT G ++T+G+ G LG
Sbjct: 235 EDHTAALTKEGGVFTFGAGGYGQLG 259
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLGS ++ P + +A GG H+ LT +G ++ G N FG
Sbjct: 145 WGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFG 204
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ S L S ++++ I G H++A+T +G ++ +G GQLG
Sbjct: 205 QLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 264
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+V P KV L G Q A G + ++A V G++ S+G GG+G+LG G S+
Sbjct: 265 HEV--NPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSN 318
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 198 WGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQ 257
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+ A + G +Y +G NGQLG G
Sbjct: 258 LG-HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGST 316
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 317 SNRKSPFTVK 326
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+V+ P + + + G +V V G V + G G+LGH +
Sbjct: 4 EVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDK--------- 54
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRP 281
S P + L+ + + G H+ +++ G+V+ +G A ++ L ++ R P
Sbjct: 55 --SRKKPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVP 112
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
I L Y ++V CG +H+ L+ ++Y+WG N+ G LG+G
Sbjct: 113 RNIKSL-YDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLG 156
>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
Length = 1020
Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats.
Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYATG N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 117
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL K
Sbjct: 118 QLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL--K 175
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ +G +G+L G + +LG
Sbjct: 176 NVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKL--GLPNQLLGN 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
R TP+L+ E+ +++A G H+ + EN VY FG + LF+
Sbjct: 232 HR-----TPQLVSEIPEKVIQVACGG-EHTVVLTENA-VYTFGLGQFGQLGLGTFLFE-- 282
Query: 276 NHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +I + + CG HT ++T G +YT+G +G LG+G
Sbjct: 283 --TSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats.
Identities = 82/257 (31%), Positives = 126/257 (49%), Gaps = 28/257 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQVT--IGKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIG 323
+YT+G + G LG+G
Sbjct: 262 A-VYTFGLGQFGQLGLG 277
Score = 102 bits (253), Expect = 3e-19, Method: Composition-based stats.
Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 20/202 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K +AG SA + E+GR++++GD + ++ + ++ P ++ + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 301 CVLTSGGELYTWGSNENGCLGI 322
+T+ GELY +G ENG LG+
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL 224
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMV 362
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 165/323 (51%), Gaps = 32/323 (9%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++++ D + G I + R + +G+ D+G+LGLG ++ +P + +
Sbjct: 29 SKFWIRNDKAMHISCGDEHSAIITESGRLYT--FGSNDWGQLGLGHMKPTTKPGCVKSLK 86
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ + +ACG +HT+ T+ G +Y+ G GQLG + + P I+ +++ +S
Sbjct: 87 QEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGD-AQCATSPQLINLPEQKYKLLS 145
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS+A+T DG LYMWG S GQLGLG + + P +++ S + + G+ +
Sbjct: 146 AGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDS--VETPKELKFHSSV--SWVSCGYYHT 201
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT GK+ ++G G+LG ++ L T+ TP+ ++ + K+K+ A G H
Sbjct: 202 AIVTDDGKLYTFGEKEFGKLGLTEDQ-----LEDTT--TPKHVESIT-EKIKLVACGGAH 253
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLP-----YSEE----VVCGGYH 299
+A I + G +Y FG D M Q GN PSL+ LP SE V CG H
Sbjct: 254 TAVISDVGNLYTFG----DGMHGQLGN---GPSLLQLSLPQKVARLSEHKCKYVSCGDNH 306
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
T V+T G +YT+G +G LGI
Sbjct: 307 TAVITEKGAMYTFGDGRHGKLGI 329
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 137/273 (50%), Gaps = 21/273 (7%)
Query: 57 ESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+SR+ + S F + KA+ +CG H+ +TE+G +Y G ND+GQLG+ ++ + +
Sbjct: 20 KSRFADNLPSKFWIRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLG-HMKPTTK 78
Query: 115 PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P + LK+E V ++ G H+ T G LY +G S+GQLG G P ++
Sbjct: 79 PGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSP---QLIN 135
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L K + G + S A+T G + WG+G G+LG G S+ TP+ +K
Sbjct: 136 LPEQKYKLLSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSV---------ETPKELK 186
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSE 291
V + G+ H+A + ++G++Y FG++ K+ E P + +
Sbjct: 187 FHS--SVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEKI 244
Query: 292 EVV-CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++V CGG HT V++ G LYT+G +G LG G
Sbjct: 245 KLVACGGAHTAVISDVGNLYTFGDGMHGQLGNG 277
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 111/237 (46%), Gaps = 22/237 (9%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG ++ FG+ ++N+ P + + + IS G HS+ IT G LY
Sbjct: 9 IPETGAIFT-----FGKSRFADNL-----PSKFWIRNDKAMHISCGDEHSAIITESGRLY 58
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+G N GQLGLG K P V+ L A G ++ T G++ S+GAG
Sbjct: 59 TFGSNDWGQLGLGH--MKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGS 116
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G + +P+LI L K K+ +AG HSA + +G +Y++G
Sbjct: 117 DGQLGTGD---------AQCATSPQLIN-LPEQKYKLLSAGTDHSAALTTDGTLYMWGSG 166
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ ++ + P + V CG YHT ++T G+LYT+G E G LG+
Sbjct: 167 SEGQLGLGNTDSVETPKELKFHSSVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGL 223
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG+G G+LGLG+ +S P + H S+ ++CG HT +T+ G +Y G +F
Sbjct: 162 MWGSGSEGQLGLGNTDSVETP---KELKFHSSVSWVSCGYYHTAIVTDDGKLYTFGEKEF 218
Query: 101 GQLGISEN-IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG++E+ + + P + + +++ ++ G H++ I+ G LY +G +GQLG G
Sbjct: 219 GKLGLTEDQLEDTTTPKHVESITEKIKLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGP 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ + +P KV LS K + G + +T G + ++G G G+LG +E
Sbjct: 279 SLLQ-LSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGISEED 333
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 6/133 (4%)
Query: 43 WGNGDYGRLGL--GSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+G ++G+LGL LE P V S EK +K +ACGGAHT +++ G +Y G
Sbjct: 213 FGEKEFGKLGLTEDQLEDTTTPKHVESITEK--IKLVACGGAHTAVISDVGNLYTFGDGM 270
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG ++ P +++ L + + +S G +H++ IT G +Y +G +G+LG+
Sbjct: 271 HGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGIS 330
Query: 159 KKAAKVIPIPTKV 171
++ I P KV
Sbjct: 331 EEDFCNIFKPCKV 343
>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 776
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 134/287 (46%), Gaps = 26/287 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG GS PV S + A+A GG HT LT +G V G N GQ
Sbjct: 230 WGGNNYGQLGDGSYTDSSTPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVRCWGANYSGQ 288
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G S P +SGL V I+ G +H+ A+T G ++ WG N +GQLG G A
Sbjct: 289 LGNGLTFGRS-TPGAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTA 347
Query: 163 KVIPI-----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P+ P+ VE + A G + A+ G V WG G+LG G
Sbjct: 348 RSTPVAVSGLPSGVETI--------AAGDYHTCALMSSGGVRCWGHNDRGQLGDGT---- 395
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+T+ TP + L V AAG LH+ +G V+ +GD + ++
Sbjct: 396 -----TTARSTPVAVSGLP-SGVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTD 449
Query: 278 ARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P +S L E + GG+HTC LT G ++ WG N +G LG G
Sbjct: 450 SSTPVAVSGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDG 496
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 126/282 (44%), Gaps = 16/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+GRLG GS PV S + A+A GGAHT LT +G V+ G N +GQ
Sbjct: 77 WGGNDFGRLGDGSYTDSSTPVAVSGLPS-GVTAIAAGGAHTCALTSSGEVWCWGSNFYGQ 135
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A T G ++ WG N GQLG G
Sbjct: 136 LGDGSYTTRS-TPVAVSGLPSGVTAIAAGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTD 194
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A G+V WG G+LG G
Sbjct: 195 RSTPV--AVSGLPSEVTAIAA-GDAHTCARMSSGEVWCWGGNNYGQLGDGSY-------- 243
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T TP + L IAA G +H+ + +G V +G ++ P
Sbjct: 244 -TDSSTPVAVSGLPSGVTAIAAGG-VHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPG 301
Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S LP + G YHTC LT G ++ WG N +G LG G
Sbjct: 302 AVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDG 343
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 132/279 (47%), Gaps = 16/279 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG G+ +R PV S + A+A G HT T +G V+ G N GQ
Sbjct: 383 WGHNDRGQLGDGTTTARSTPVAVSGLPS-GVTAIAAGRLHTCARTSSGGVWCWGDNSDGQ 441
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+ +SGL V I+ G H+ A+T G ++ WG+N++GQLG G
Sbjct: 442 LG-DGSFTDSSTPVAVSGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIY 500
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+TG G V WG +G+LG G
Sbjct: 501 HITPV--AVSGLPSGVTAIAAGGV-HTCALTGSGGVWCWGGNFAGQLGDGT--------- 548
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L V AAG +H+ + +G V+ +G ++ + P
Sbjct: 549 TTDRSTPVAVSGLP-SGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPV 607
Query: 283 LISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCL 320
+S LP + G +TC LT G ++ WG N +G L
Sbjct: 608 AVSGLPSGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQL 646
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 132/284 (46%), Gaps = 21/284 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS PV S + A+A GG HT LT +G V+ G N GQ
Sbjct: 485 WGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVWCWGGNFAGQ 543
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+T G ++ WG N GQLG G
Sbjct: 544 LGDGTTTDRS-TPVAVSGLPSGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTN 602
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+TG G V WG SG+L G
Sbjct: 603 RSTPV--AVSGLPSGVTAIAA-GLRYTCALTGSGGVWCWGYNLSGQLDDG---------- 649
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+TS TP + L IAA G+ ++ +G V +G ++ +G +R
Sbjct: 650 TTSRSTPVAVSGLPSGVTAIAAGGW-YTCARTSSGGVRCWGANGSGQL--GDGTTTKRST 706
Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S LP + GG HTC L S G ++ WG N++G LG G
Sbjct: 707 PVAVSGLPSGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDG 750
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 120/260 (46%), Gaps = 16/260 (6%)
Query: 66 SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
S+F + A+A GG HT T +G V+ G NDFG+LG S P+ +SGL
Sbjct: 47 SSFSPLQGVTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSS-TPVAVSGLPSG 105
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V I+ G H+ A+T GE++ WG N GQLG G + P+ V L T AA
Sbjct: 106 VTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPV--AVSGLPSGVTAIAAG 163
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G+ + A T G V WG G+LG G +T TP + L +V A
Sbjct: 164 GW-HTCARTSSGGVWCWGGNYRGQLGDGT---------TTDRSTPVAVSGLP-SEVTAIA 212
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVL 303
AG H+ +G V+ +G ++ + P +S LP + GG HTC L
Sbjct: 213 AGDAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCAL 272
Query: 304 TSGGELYTWGSNENGCLGIG 323
T G + WG+N +G LG G
Sbjct: 273 TGSGGVRCWGANYSGQLGNG 292
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LG G+ +R PV S + A+A G +T LT +G V+ G N GQ
Sbjct: 587 WGGNDFGQLGDGTTTNRSTPVAVSGLPS-GVTAIAAGLRYTCALTGSGGVWCWGYNLSGQ 645
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P+ +SGL V I+ G ++ A T G + WG N +GQLG G
Sbjct: 646 L--DDGTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTK 703
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+ P+ V L T AA G E + A+ G V WG SG+LG G+
Sbjct: 704 RSTPV--AVSGLPSGVTAIAA-GGEHTCALMSSGGVWCWGRNDSGQLGDGRP 752
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+L G+ SR PV S + A+A GG +T T +G V G N GQ
Sbjct: 638 WGYNLSGQLDDGT-TSRSTPVAVSGLPS-GVTAIAAGGWYTCARTSSGGVRCWGANGSGQ 695
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+ G ++ WG+N +GQLG G+
Sbjct: 696 LGDGTTTKRS-TPVAVSGLPSGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLY 754
Query: 163 KVIPIPTKVECLSGIF 178
+ P+ G++
Sbjct: 755 RTTPVDVVTSASWGVY 770
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 152/311 (48%), Gaps = 41/311 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRP------VVCSAFEKH-------SLKALACGGAHTLFLTET 89
+G D G+LG G+ + RP V S F K + A++CG HT+ LT +
Sbjct: 15 FGCNDDGQLGTGA---KRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGELYM 146
G VY+ G GQLG + ++ P +I+ ++E V +S G HS+A+T DG LYM
Sbjct: 72 GAVYSWGWGSMGQLGHGDLKSINV-PQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYM 130
Query: 147 WGKNSNGQLGLGKK-AAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTGGGKVLSWG 202
WG+ GQLGL K+ A P K L G+ + + + G + A+T G+V WG
Sbjct: 131 WGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWG 190
Query: 203 AGGSGRLGHG-------QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G SG+LG G ++ +LG R P L++ G KV A G HSA + E
Sbjct: 191 RGDSGQLGIGSAWLKDTDDNGLLGVSR------PHLVEGFNGEKVVQVACGAFHSAAVTE 244
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP---SLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
G VYI+G + + + + P +P + V CGG+HT V+ G+ Y +
Sbjct: 245 QGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIP-ALRVSCGGWHTMVVAKSGDCYAF 303
Query: 313 GSNENGCLGIG 323
G E G LG+G
Sbjct: 304 GRGEYGRLGLG 314
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 138/298 (46%), Gaps = 27/298 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLNDF 100
WG G G+LG G L+S P + FE+ LK ++CGG H+ +T G +Y G +
Sbjct: 77 WGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHW 136
Query: 101 GQLGISENIGYSLE------PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG+ + + E PL + VV++S G H++A+T G +Y+WG+ +GQ
Sbjct: 137 GQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQ 196
Query: 155 LGLGKKAAKV--------IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
LG+G K + P VE +G Q A G S AVT G V WG
Sbjct: 197 LGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDY 256
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G LG GQ S + TP+ ++ + + + G H+ + ++G Y FG
Sbjct: 257 GMLGVGQTSD---------QQTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGE 307
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ + RP L+ L + CGG HT +TS G Y G ++G LG+
Sbjct: 308 YGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGM 365
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 129/281 (45%), Gaps = 30/281 (10%)
Query: 42 LWGNGDYGRLGLG-SLESRWR--PVVCSAFE---KHSLKALACGGAHTLFLTETGCVYAT 95
+WG +G+LGL E+ PV C E S+ ++CGG HT LT G VY
Sbjct: 130 MWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVW 189
Query: 96 GLNDFGQLGI--------SEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGEL 144
G D GQLGI +N +G S P + G E VVQ++ G HS+A+T G +
Sbjct: 190 GRGDSGQLGIGSAWLKDTDDNGLLGVS-RPHLVEGFNGEKVVQVACGAFHSAAVTEQGHV 248
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y+WGK G LG+G+ + + P +VE I + + G ++ V G ++G G
Sbjct: 249 YIWGKEDYGMLGVGQTSDQ--QTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRG 306
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
GRLG G + S P L+K L+G V AA G H+ + +G Y+ G
Sbjct: 307 EYGRLGLGD---------TKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGR 357
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLT 304
++ + P+ + P +V GG H+ LT
Sbjct: 358 PDHGRLGMTDMKPLSVPTRLDLGPIPVRQVSAGGAHSMALT 398
>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
Length = 462
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
LI + ++ C YHT V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 124/251 (49%), Gaps = 18/251 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L VY+ G N +GQLG + + P I L V +S G HS
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S GQLG+G+ ++ +PTK++ L+GI Q + G S+A++
Sbjct: 87 VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG HS +
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197
Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
G + +G ++ GN + +P I L + CG HT VLT G++
Sbjct: 198 TGTSFGWGSNRSGQLAL-SGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256
Query: 310 YTWGSNENGCL 320
+T+G N +G L
Sbjct: 257 FTFGGNSSGQL 267
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 17/204 (8%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ + +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
+ G HS + E+G V+ +G + ++ G ++R ++ K+ E +V GG
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190
Query: 299 HTCVLTSGGELYTWGSNENGCLGI 322
H+ L+ G + WGSN +G L +
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLAL 214
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 27/266 (10%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+LI+ + G +I A + A + G+V G R
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG---------------R 313
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTS 305
PS S + E TC+L +
Sbjct: 314 GPSHTSNPTHQEAPAENSDITCLLAA 339
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 12/152 (7%)
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
SGI QAA G S+ + +V S G G+LG R S P I+
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQ---------RRDQSTERPEPIQA 70
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISKLPYSE-- 291
L + V + + G HS + G+V+ +G + ++ E + P+ I L +
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG YH+ L+ G +++WG N G LG+G
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG 162
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + V CG H+ + G+++ WG+ G LGIG
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIG 109
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 139/286 (48%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN G+LG+G + P +C F LK +ACGG HTLFL + G VY G N G
Sbjct: 4 WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCG 63
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + G S P + L +++ +S G HS A+ G++++WG GQLGL +
Sbjct: 64 QLG-HDKAGNS--PELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGL-ET 119
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + IP ++ L Q G + +A++ G++ +WG SG+LG G+
Sbjct: 120 AETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGK------- 172
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TS+ +P +K L G+ + AG H + +G V+ +G ++ +
Sbjct: 173 -GETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAV 231
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I K S+ VV CG HT LT G L+T+G G LG G
Sbjct: 232 PCHI-KFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHG 276
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG GD G+LGL + E+ R P + HS+ + CG H + L+ G ++ G N
Sbjct: 106 VWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSS 165
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ + L P + L + QI+ G H A+++ G ++ WGKN GQLGL
Sbjct: 166 GQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLND 225
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P ++ L + G E + A+T G + ++G G G+LGHG
Sbjct: 226 KQDRA--VPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGS------ 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
S +E PR + EL G +V G H+ A + +G VY FG
Sbjct: 278 ---SNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFG 319
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LGLG E S+ P + L + GG H L+ +G V+ G N G
Sbjct: 160 WGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAG 219
Query: 102 QLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+++ ++ P I L+ + VV IS G H++A+T G L+ +G S GQLG G
Sbjct: 220 QLGLNDKQDRAV-PCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSS 278
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +V L G Q G ++A V G V ++G G+LG G IL
Sbjct: 279 NNEL--LPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTG----ILA 332
Query: 220 FLRS 223
LRS
Sbjct: 333 DLRS 336
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT++G ++ G GQ
Sbjct: 213 WGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQ 272
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ L EV QI+ G HH+ A + G +Y +G NS+GQLG G
Sbjct: 273 LGHGSS-NNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGIL 331
Query: 161 AAKVIPIPTKVECLS 175
A P P K + L+
Sbjct: 332 ADLRSPHPVKNDFLT 346
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 45/171 (26%)
Query: 198 VLSWGAGGSGRLGHGQE-------------------------SSILGFLRSTSEYT---- 228
+L WG G+LG G E L L+ S YT
Sbjct: 1 MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSN 60
Query: 229 -------------PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
P L+ L+ K+ + + G HS ++E G+V+++G ++ +
Sbjct: 61 SCGQLGHDKAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETA 120
Query: 276 NHARR-PSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A R P L+ KL +S +VVCG H L+ G+L+TWG N +G LG+G
Sbjct: 121 ETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLG 171
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 143/281 (50%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG GSL+ + PV A+ ++ A+ G H+L + G V+ G N+FGQ
Sbjct: 72 WGDNAYGQLGNGSLQDQRVPV--RAWGLWNISAVGAGDLHSLAMKSDGTVWTWGGNNFGQ 129
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G P+++ GL EVV+++ G+ HS A+ DG ++ WG N G+LG G
Sbjct: 130 LGDGTTTGRQ-APVQVPGL-GEVVRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQ 187
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+ +V+ L I K A G S+A+ G G+V +WG+ +G+LG + G+
Sbjct: 188 RLMPV--QVQGLPTI--KAIAAGNAHSLALDGTGRVWAWGSNSNGQLG----DTTAGY-- 237
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P L+ L +AG HS +G +++G ++ P
Sbjct: 238 ---RMLPALVPGL--TNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSRSAPQ 292
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + V+ H+ VL S G ++TWGSN+ G LG G
Sbjct: 293 QVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDG 333
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 127/282 (45%), Gaps = 20/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ GRLG G+ R PV ++KA+A G AH+L L TG V+A G N GQ
Sbjct: 172 WGSNGAGRLGDGTTTQRLMPVQVQGLP--TIKAIAAGNAHSLALDGTGRVWAWGSNSNGQ 229
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG GY + P + GL +S G +HS DG ++WG N+ GQLG G +
Sbjct: 230 LG-DTTAGYRMLPALVPGLTN-ATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTS 287
Query: 163 KVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P + +SG+ LG E S+ + G V +WG+ G+LG G + L
Sbjct: 288 RSAP-----QQVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRL--- 339
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P + L GV V +AA HS + NG V+ +G ++ +++ P
Sbjct: 340 ------VPVQVMGLSGV-VAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSSYSAVP 392
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L V G YH G ++ WG N G LG G
Sbjct: 393 KRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDG 434
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 122/251 (48%), Gaps = 17/251 (6%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
L +A G HTL + G V+A G N +GQLG + ++ P+R GL + + G
Sbjct: 50 LGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLG-NGSLQDQRVPVRAWGLWN-ISAVGAGD 107
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
HS A+ DG ++ WG N+ GQLG G + P+ +V L + + A GF S+A+
Sbjct: 108 LHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPV--QVPGLGEVV--RVAAGFSHSLAL 163
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V +WG+ G+GRLG G +T P ++ L +K AAG HS
Sbjct: 164 KTDGTVWAWGSNGAGRLGDG---------TTTQRLMPVQVQGLP--TIKAIAAGNAHSLA 212
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+D GRV+ +G + ++ + P+L+ L + + G H+ V + G + W
Sbjct: 213 LDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADGTTWVW 272
Query: 313 GSNENGCLGIG 323
G+N G LG G
Sbjct: 273 GANTYGQLGDG 283
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG GS R P + ++A G H L + G ++ G N+ GQ
Sbjct: 473 WGDNANGQLGNGSTTDRSNPTQVPGLT--GVVSIAAGPGHALAVKADGTLWTWGDNNTGQ 530
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P ++ G+ VV ++ G +HS + VDG ++ WG N GQLG G
Sbjct: 531 LGDGTTVDRPI-PTQVPGVTG-VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTI 588
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+P++ L+G+ A G S+A+ G V +WG G+LG+G
Sbjct: 589 R--PVPSQTPNLTGVVAITA--GLYHSLALKTDGTVWAWGYNLHGQLGNG---------N 635
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T++ P + G V + AG HS I +G V+ +G ++ P+
Sbjct: 636 TTTQQVPTQVPGFSG-GVSL-GAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPT 693
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + G +H+ L + G + WGSN+ G LG G
Sbjct: 694 QVAGFTGVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDG 734
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG G+ R P + A+A G AH+L L G V+ G N +GQ
Sbjct: 822 WGNNAKGQLGDGTTTRRLVPTQVPGLT--GVVAVAAGYAHSLALKADGTVWGWGENIYGQ 879
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P + GL V+ +++G +H A DG L+ WG N++GQLG+G
Sbjct: 880 LGDGTTT-QRVAPTQAQGLTV-VLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTT 937
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P T V LSG+ + A + S+A+ G V +WG +G+LG G
Sbjct: 938 RLAP--TLVPSLSGVVSLSAT--HQHSLALKPDGTVWAWGYNSNGQLGDG---------T 984
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+T+ + P L VK +AGF +S + +G V+ +G D+ G R
Sbjct: 985 TTTRHVPTQAPSLS--SVKAVSAGFEYSLAVKADGTVWSWGIN--DRGQLGSGTATPRAT 1040
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ ++ L ++ H V+++ G + +G NE G LG G
Sbjct: 1041 PTQVAGLNSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAG 1083
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 130/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ + P S ++ LA G H + + G V+ G N GQ
Sbjct: 772 WGDNTYGQLGDGTTLATRSPAQVSGLTD--VEGLAAGEGHVVVVKMDGTVWTWGNNAKGQ 829
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P ++ GL VV ++ GY HS A+ DG ++ WG+N GQLG G
Sbjct: 830 LGDGTTT-RRLVPTQVPGLTG-VVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGTTTQ 887
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+V PT+ + L+ + + A G +A G + +WG G+LG G
Sbjct: 888 RV--APTQAQGLTVVLSM--ASGTYHGLARKADGTLWAWGYNAHGQLGIG---------T 934
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ P L+ L GV V ++A HS + +G V+ +G + ++ P+
Sbjct: 935 TTTRLAPTLVPSLSGV-VSLSAT-HQHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVPT 992
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + V G ++ + + G +++WG N+ G LG G
Sbjct: 993 QAPSLSSVKAVSAGFEYSLAVKADGTVWSWGINDRGQLGSG 1033
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 20/283 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG YG+LG G+ SR P S + + H+L L G V+ G N G
Sbjct: 271 VWGANTYGQLGDGTTTSRSAPQQVSGLA--GVDGVLGAELHSLVLKSDGTVWTWGSNQRG 328
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG L P+++ GL V + HS A+ +GE++ WG N GQLG G +
Sbjct: 329 QLGDGTQE-QRLVPVQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSS 387
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P + L + A G +A G V +WG G+LG G + L
Sbjct: 388 YSA--VPKRSHAL--VERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRL--- 440
Query: 222 RSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
L ++ G+ +A AAG S + +G V+ +GD A ++
Sbjct: 441 ---------LPTQVPGLTNMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSN 491
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L + G H + + G L+TWG N G LG G
Sbjct: 492 PTQVPGLTGVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDG 534
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 126/281 (44%), Gaps = 20/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + A+ G H+L L G V+A G N GQ
Sbjct: 573 WGSNYEGQLGGGTTTIR--PVPSQTPNLTGVVAITAGLYHSLALKTDGTVWAWGYNLHGQ 630
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + N P ++ G V + G +HS AI DG ++ WG N GQLG G +
Sbjct: 631 LG-NGNTTTQQVPTQVPGFSGG-VSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTS 688
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ PT+V +G+ A G SVA+ G +WG+ G+LG G
Sbjct: 689 RT--TPTQVAGFTGV--SFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGS--------- 735
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ Y P L + V + AAG +A +G V+ +GD ++ R P+
Sbjct: 736 ARWHYAPTLSRL---VGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPA 792
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L E + G H V+ G ++TWG+N G LG G
Sbjct: 793 QVSGLTDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDG 833
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R P + S+KA++ G ++L + G V++ G+ND GQ
Sbjct: 972 WGYNSNGQLGDGTTTTRHVPTQAPSLS--SVKAVSAGFEYSLAVKADGTVWSWGINDRGQ 1029
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P +++GL V + H+ ++ DG + +G N GQLG G
Sbjct: 1030 LG-SGTATPRATPTQVAGL-NSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLI 1087
Query: 163 KVIP 166
++ P
Sbjct: 1088 RLAP 1091
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
++ + AAG H+ + +G V+ +GD A ++ R P L V G
Sbjct: 49 RLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWNISAVGAGDL 108
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
H+ + S G ++TWG N G LG G
Sbjct: 109 HSLAMKSDGTVWTWGGNNFGQLGDG 133
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 21/291 (7%)
Query: 43 WGNGDYGRLGL-------GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
WG G G LGL + +P F +++ +ACG HTL L G VY+
Sbjct: 56 WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 115
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G NDFGQLG ++ LE +++ L E+ ++ G HS A++ G+++ WG N NGQ
Sbjct: 116 GANDFGQLGQDRSM-RKLE--QVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQ 172
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + + P ++ L+ + Q A G +A+ G++ SWG SG+LG G++
Sbjct: 173 LGCGTEEESRLR-PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRD 231
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + +E PR + L GV + + A G +HS + +G V+++G + ++ +
Sbjct: 232 S-------TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSD 284
Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+++ L + V CG HT LT+ G ++T+G+ G LG G
Sbjct: 285 QRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHG 335
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 132/284 (46%), Gaps = 15/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D+G+LG + V +A H ++A+ACG AH+L L++ G V++ G N GQL
Sbjct: 116 GANDFGQLGQDRSMRKLEQV--AALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQL 173
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G L P I L +VQI+ G H A+ +GEL+ WG N++GQLGLG+ +
Sbjct: 174 GCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDST 233
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P +V L G+ A G SV +T G V WG G+LG + L
Sbjct: 234 GNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLH--- 290
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++K L ++K G H+A + +G V+ FG ++ + P
Sbjct: 291 ------PTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPR 344
Query: 283 LISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
+ +L ++ CG HT G LY +G +G LG G
Sbjct: 345 RVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNG 388
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 144 LYMWGKNSNGQLGL-----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
LY WG NG+LGL G + P +V ++ A G + ++ + G V
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
S GA G+LG + +R + + L +++ A G HS + + G+
Sbjct: 113 YSCGANDFGQLGQDRS------MRKLEQ-----VAALSAHEIRAVACGEAHSLALSDAGQ 161
Query: 259 VYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
V+ +G +R E RP +I KL + ++ CG H L + GEL++WG N
Sbjct: 162 VFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 221
Query: 316 ENGCLGIG 323
+G LG+G
Sbjct: 222 ASGQLGLG 229
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGL R P V +K + CG HT LT G V+ G +G
Sbjct: 271 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 330
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
QLG + ++ + + + Q+S G H+ A G LY++G +GQLG G
Sbjct: 331 QLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 390
Query: 161 AAKVIPI 167
+ +P+
Sbjct: 391 ESSALPV 397
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 21/291 (7%)
Query: 43 WGNGDYGRLGL-------GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
WG G G LGL + +P F +++ +ACG HTL L G VY+
Sbjct: 50 WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 109
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G NDFGQLG ++ LE +++ L E+ ++ G HS A++ G+++ WG N NGQ
Sbjct: 110 GANDFGQLGQDRSM-RKLE--QVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQ 166
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + + P ++ L+ + Q A G +A+ G++ SWG SG+LG G++
Sbjct: 167 LGCGTEEESRLR-PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRD 225
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + +E PR + L GV + + A G +HS + +G V+++G + ++ +
Sbjct: 226 S-------TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSD 278
Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+++ L + V CG HT LT+ G ++T+G+ G LG G
Sbjct: 279 QRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHG 329
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 132/284 (46%), Gaps = 15/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D+G+LG + V +A H ++A+ACG AH+L L++ G V++ G N GQL
Sbjct: 110 GANDFGQLGQDRSMRKLEQV--AALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQL 167
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G L P I L +VQI+ G H A+ +GEL+ WG N++GQLGLG+ +
Sbjct: 168 GCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDST 227
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P +V L G+ A G SV +T G V WG G+LG + L
Sbjct: 228 GNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLH--- 284
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++K L ++K G H+A + +G V+ FG ++ + P
Sbjct: 285 ------PTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPR 338
Query: 283 LISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
+ +L ++ CG HT G LY +G +G LG G
Sbjct: 339 RVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNG 382
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 144 LYMWGKNSNGQLGL-----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
LY WG NG+LGL G + P +V ++ A G + ++ + G V
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
S GA G+LG + +R + + L +++ A G HS + + G+
Sbjct: 107 YSCGANDFGQLGQDRS------MRKLEQ-----VAALSAHEIRAVACGEAHSLALSDAGQ 155
Query: 259 VYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
V+ +G +R E RP +I KL + ++ CG H L + GEL++WG N
Sbjct: 156 VFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 215
Query: 316 ENGCLGIG 323
+G LG+G
Sbjct: 216 ASGQLGLG 223
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGL R P V +K + CG HT LT G V+ G +G
Sbjct: 265 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 324
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
QLG + ++ + + + Q+S G H+ A G LY++G +GQLG G
Sbjct: 325 QLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 384
Query: 161 AAKVIPI 167
+ +P+
Sbjct: 385 ESSALPV 391
>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 142/289 (49%), Gaps = 19/289 (6%)
Query: 41 ALWGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A+WG G+LG+G + + R + + E+ L +A G H+L +T +G VY TG N
Sbjct: 4 AVWGATGAGQLGIGDADGTGKTRVTLVPSLEQE-LAFVATGYYHSLAITRSGTVYTTGKN 62
Query: 99 DFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
D QLG S G + R++ L+ V + G S + G++Y WG GQLGL
Sbjct: 63 DRRQLGRS---GDEHKWARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGGERGQLGL 119
Query: 158 GKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G++A + +P V+ L F A G +A+T G+V SWG G G+LG GQ
Sbjct: 120 GREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQ--- 176
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S ++P +I +L G V AAG +S + +VY FG + ++ +
Sbjct: 177 ------FVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTT 230
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP+L+ L + V G +HT T G LY WGSN+ G LG+G
Sbjct: 231 ARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLG 279
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 28/294 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D +LG E +W V + E + A A G ++ + TG VY G + GQL
Sbjct: 60 GKNDRRQLGRSGDEHKWARV--TPLETITAVAGAVGLDFSVVVDSTGKVYTWGGGERGQL 117
Query: 104 GISENIGY--SLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+ S P + GL V+ ++ G H A+T DG ++ WG+ ++GQLG G+
Sbjct: 118 GLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQF 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P + L G A G S+AVTG +V ++G+ G+LG G
Sbjct: 178 VSRH--SPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGD------- 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHAR 279
+T+ + P L++ L+G +V AG H+ G +Y +G ++ L E +
Sbjct: 229 --TTARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEADSVA 286
Query: 280 RPSLIS---KLPYSEEVVCGGYHTCVL----TSGGELYT----WGSNENGCLGI 322
P+ I+ ++ EV G HT L T G T +G+N G LG+
Sbjct: 287 APTEITHILEIGRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGANNTGQLGL 340
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 25/234 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G SR P V + + ++A G ++L +T VYA G N GQ
Sbjct: 164 WGEGADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQ 223
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + P + L K+V ++ G H+ A T G LY WG N GQLGLG +A
Sbjct: 224 LGVGDTTA-RFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEA 282
Query: 162 AKVIPIPTKVECLSGI-FTKQAALGFEQSVA----VTGGGK----VLSWGAGGSGRLGHG 212
V PT++ + I + + G +VA VT G +++GA +G+LG
Sbjct: 283 DSVA-APTEITHILEIGRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGANNTGQLGLD 341
Query: 213 QESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDR 265
+ + T + P +K + + +K+ A G N + IFG++
Sbjct: 342 PDHPA---SKRTQLFHPVRLKRISSMHPIKLIAGG---------NHTIMIFGEQ 383
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 12/128 (9%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V WGA G+G+LG G G ++ P L +EL V A G+ HS I +G
Sbjct: 3 VAVWGATGAGQLGIGDAD---GTGKTRVTLVPSLEQELAFV-----ATGYYHSLAITRSG 54
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSN 315
VY G D+ + + ++ L V G + V+ S G++YTWG
Sbjct: 55 TVYTTGKN--DRRQLGRSGDEHKWARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGG 112
Query: 316 ENGCLGIG 323
E G LG+G
Sbjct: 113 ERGQLGLG 120
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 20/283 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D+G+LG+ ++ RP + +K +ACG HT+ TE+GC+Y G N GQ
Sbjct: 60 FGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQ 119
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ E+I S P+++ ++ ++ G HS A+T DGELY+WG S GQLGLG
Sbjct: 120 LGV-EDIPSSNCPVKVECEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDD 178
Query: 163 KVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K P + T + +S A G+ + VT G+V ++G G G+LG G +
Sbjct: 179 KSTPTLLSTDNKVIS------VACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYG---- 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-HAR 279
P+ + E K K A G H+ + E G+VY FG+ ++ + +
Sbjct: 229 ----KAVAPKKVNIPE--KAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCE 282
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P ++ ++ G HT ++T G+LYT+G + LG+
Sbjct: 283 TPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGL 325
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 133/250 (53%), Gaps = 17/250 (6%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
K++ACG HT +TE+G ++ G+ND+GQLGI E + S P + LK E V+ ++ G
Sbjct: 39 KSVACGDEHTALVTESGRLFTFGVNDWGQLGIDE-VKVSTRPCCVKKLKPEKVKVVACGR 97
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ T G LY +G N +GQLG+ + P+ KVEC + K A G + SVA+
Sbjct: 98 IHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPV--KVECEPRQY-KALAAGADHSVAL 154
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G++ WG G G+LG LG + S TP L+ KV A G+ H+A
Sbjct: 155 TDDGELYVWGGGSEGQLG-------LGDIDDKS--TPTLLS--TDNKVISVACGYYHTAF 203
Query: 253 IDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
+ + G V+ FG+ K+ + A P ++ ++ V CGG HT VLT G++YT
Sbjct: 204 VTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGSHTVVLTECGKVYT 263
Query: 312 WGSNENGCLG 321
+G NG LG
Sbjct: 264 FGEGGNGQLG 273
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 22/238 (9%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ E+G ++ G + FG +N+ P + + ++ G H++ +T G L+
Sbjct: 9 IPESGAIFTFGKSRFG-----DNL-----PNKFWVRGDKAKSVACGDEHTALVTESGRLF 58
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+G N GQLG+ + KV P V+ L K A G ++ T G + ++GA G
Sbjct: 59 TFGVNDWGQLGIDE--VKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANG 116
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG S ++ E PR K L AAG HS + ++G +Y++G
Sbjct: 117 DGQLGVEDIPSSNCPVKVECE--PRQYKAL--------AAGADHSVALTDDGELYVWGGG 166
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ + + P+L+S V CG YHT +T GE++T+G + G LG G
Sbjct: 167 SEGQLGLGDIDDKSTPTLLSTDNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQG 224
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G G+LGLG ++ + P + S K + ++ACG HT F+T+ G V+ G D G
Sbjct: 162 VWGGGSEGQLGLGDIDDKSTPTLLSTDNK--VISVACGYYHTAFVTDVGEVFTFGEGDGG 219
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + G ++ P +++ + ++ ++ G H+ +T G++Y +G+ NGQLG K
Sbjct: 220 KLGQGTDYGKAVAPKKVN-IPEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKY 278
Query: 162 AKVIPIPTKVECLSGIF------TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
C + ++ Q A G + VT G++ ++G G +LG E
Sbjct: 279 ---------FYCETPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHE 328
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 43 WGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+G GD G+LG G+ + P + EK K++ACGG+HT+ LTE G VY G G
Sbjct: 213 FGEGDGGKLGQGTDYGKAVAPKKVNIPEK--AKSVACGGSHTVVLTECGKVYTFGEGGNG 270
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG Y P+ ++ K +V QI+ G +H++ +T G+LY +G + +LGL +
Sbjct: 271 QLGHKNKYFYCETPVWLN-FKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHEC 329
Query: 162 AKVIPIPTKVECLSGIFTKQAALG 185
P + + S Q + G
Sbjct: 330 YSNQYFPQRSKRFSKFIVTQVSCG 353
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 158/313 (50%), Gaps = 45/313 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRP------VVCSAFEKH-------SLKALACGGAHTLFLTET 89
+G D G+LG G+ + RP V S F + + A++CG HT+ LT +
Sbjct: 11 FGCNDDGQLGTGA---KRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSS 67
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
G VY+ G GQLG ++ EP +I+ ++E ++ IS G HS+A+T DG LY+
Sbjct: 68 GAVYSWGWGSMGQLG-HGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYV 126
Query: 147 WGKNSNGQLGLGKK---AAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
WG++ GQLGL K+ A + +P+ + E +G + + G + A+T G+V WG
Sbjct: 127 WGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWG 186
Query: 203 AGGSGRLGHG-------QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G SG+LG G + S++G R P L+K G KV A G HSA + E
Sbjct: 187 RGDSGQLGIGSVWMKDPENESLMGASR------PHLLKAFNGEKVVQVACGAFHSAAVTE 240
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE-----VVCGGYHTCVLTSGGELY 310
G VY++G + + + + P +L Y ++ V CGG+HT V+ G+ Y
Sbjct: 241 QGHVYVWGKEDYGMLGVGQSSDQQIP---KRLEYFDDIPVLRVSCGGWHTVVVAKSGDCY 297
Query: 311 TWGSNENGCLGIG 323
+G E G LG+G
Sbjct: 298 AFGRGEYGRLGLG 310
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 139/298 (46%), Gaps = 27/298 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLNDF 100
WG G G+LG G L+ P + FE+ L+ ++CGG H+ +T+ G +Y G + +
Sbjct: 73 WGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHW 132
Query: 101 GQLGISENIGYSLEPLRISGLKKE------VVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG+ + + E L + E +V++S G H++A+T G +Y+WG+ +GQ
Sbjct: 133 GQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQ 192
Query: 155 LGLGKKAAKV--------IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
LG+G K P ++ +G Q A G S AVT G V WG
Sbjct: 193 LGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDY 252
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G LG GQ S+ + P+ ++ + + V + G H+ + ++G Y FG
Sbjct: 253 GMLGVGQ---------SSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGE 303
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ + RP L+ L + CGG HT +TS G Y G ++G LG+
Sbjct: 304 YGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGL 361
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 116/240 (48%), Gaps = 31/240 (12%)
Query: 42 LWGNGDYGRLGL-----GSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVY 93
+WG +G+LGL + ES PV C E ++ ++CGG HT LT G VY
Sbjct: 126 VWGESHWGQLGLPKEYEAAHESL--PVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVY 183
Query: 94 ATGLNDFGQLGI-------SEN---IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
G D GQLGI EN +G S L + ++VVQ++ G HS+A+T G
Sbjct: 184 VWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGH 243
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y+WGK G LG+G+ + + IP ++E I + + G +V V G ++G
Sbjct: 244 VYVWGKEDYGMLGVGQSSDQQ--IPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGR 301
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLG G + S P L+K L+G V AA G H+ + +G Y+ G
Sbjct: 302 GEYGRLGLGD---------TKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAG 352
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG DYG LG+G + P F+ + ++CGG HT+ + ++G YA G ++G
Sbjct: 246 VWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYG 305
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG+ + + P + LK K V+Q + G H+ +T DG Y+ G+ +G+LGL
Sbjct: 306 RLGLGDTKSRT-RPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLAD- 363
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K + +PT+++ L I +Q + G SVA+
Sbjct: 364 -MKALGVPTRLD-LGPIPVRQFSAGGAHSVAL 393
>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Monodelphis domestica]
Length = 1170
Score = 126 bits (316), Expect = 2e-26, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 157/324 (48%), Gaps = 31/324 (9%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++LK DI G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWLKNDIPAYLSCGDEHTALITGNSKLY--MFGSNNWGQLGLGSKTTVNKPTCVKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
+K ACG HTL TE G VYA G N GQLG+ E + L + + ++
Sbjct: 86 PEKVKIAACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTA--QHKIK 143
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+S G + S+A+T DG L+MWG NS GQ+GL ++A +P E G + G+
Sbjct: 144 QLSAGSNTSAALTEDGVLFMWGDNSEGQIGLAEEANVCVP----SEVTIGKPISWISCGY 199
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G++ ++G +G+LG E + + P+L+ + G KV A G
Sbjct: 200 YHSAFVTTEGELYTFGEPENGKLGLSPE-------QLKNHRIPQLVLGIPG-KVNQVACG 251
Query: 247 FLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
H+ + E VY FG + +F+ P ++ L + + CG H
Sbjct: 252 GGHTVALTEE-EVYTFGLGQFGQLGLGTFIFE----TSEPKVVKHLQNQKIQYIACGENH 306
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T +++ G +YT+G +G LG+G
Sbjct: 307 TALISDTGHMYTFGDGRHGKLGLG 330
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 80/281 (28%), Positives = 124/281 (44%), Gaps = 64/281 (22%)
Query: 23 KLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACG 79
K+ C R + T + + A GN + G+LGLG E R + S F +H +K L+ G
Sbjct: 90 KIAACGRNHTLVYTEEGKVYAAGGNSE-GQLGLGDTEERTTFQLVSFFTAQHKIKQLSAG 148
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
+ LTE G ++ G N GQ+G++E + P ++ + K + IS GY+HS+ +T
Sbjct: 149 SNTSAALTEDGVLFMWGDNSEGQIGLAEEANVCV-PSEVT-IGKPISWISCGYYHSAFVT 206
Query: 140 VDGELYMWGKNSNGQLGLGKKAAK-------VIPIPTKVE---CLSG---------IFT- 179
+GELY +G+ NG+LGL + K V+ IP KV C G ++T
Sbjct: 207 TEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGIPGKVNQVACGGGHTVALTEEEVYTF 266
Query: 180 -----KQAALG---FEQS-----------------------VAVTGGGKVLSWGAGGSGR 208
Q LG FE S ++ G + ++G G G+
Sbjct: 267 GLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHGK 326
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
LG GQE+ T+++ P L V++ A G H
Sbjct: 327 LGLGQEN-------FTNQFVPTLCSNFLKFIVRLVACGGCH 360
Score = 41.2 bits (95), Expect = 0.70, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F K ++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCHML 362
>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
Length = 1874
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 144/288 (50%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + SA + + L H+L LTE+G V++ G D+
Sbjct: 1046 GEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDY 1105
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EV+QI+ G+ HS+ +TVDG+L +G G+LGLG
Sbjct: 1106 GKLG-HGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGT 1164
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ P +V+ L A G +V V+ G ++G G G+LG G S+
Sbjct: 1165 VCNR--KTPERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSA-- 1220
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
+ TP I+ L G+KVK A G S + +G V +G DR + + Q H
Sbjct: 1221 -------KSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGH 1273
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ L + EEVV G HT LTS G ++ WG N +G LG+G
Sbjct: 1274 CT-PQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLG 1320
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 126/253 (49%), Gaps = 14/253 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + +ACG H+ +T G + G D+G+
Sbjct: 1100 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGR 1159
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ + P R+ L+ + ++ G +H+ ++ DG + +G G+LGLG
Sbjct: 1160 LGLG-TVCNRKTPERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNT 1218
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+AK P+ K+E LSG+ K+ A G + SVA+T G VL+W G RL E+ + G
Sbjct: 1219 SAKSTPV--KIEALSGLKVKKVACGTQFSVALTRDGFVLTW---GQDRLIGQTEAQMRG- 1272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TP+ + L G ++ G H+ + +G V+ +G A ++ R
Sbjct: 1273 -----HCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVRE 1327
Query: 281 PSLISKLPYSEEV 293
P L+ L SE +
Sbjct: 1328 PQLLGGLGSSEPI 1340
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 21/210 (10%)
Query: 121 LKKEVVQISTGYHHSSAITVDG--ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
++K+ I+ H + G + Y+WG +GQL +A + + P S
Sbjct: 968 VQKDAAIIAWSVQHPDDWQMGGSCDAYLWGGGRHGQLC---EAGRSVLTPLHTSSFSS-- 1022
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+Q G + + G VL+ G G GRLG G + ++ ++ L+G
Sbjct: 1023 AQQIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HSLTIVSALQGF 1073
Query: 239 KVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EV 293
V + + G HS + E+G V+ +GD K+ + RRP I L E ++
Sbjct: 1074 VVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQI 1133
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+T G+L T+G+ + G LG+G
Sbjct: 1134 ACGFKHSAVVTVDGKLLTFGNGDYGRLGLG 1163
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 97/281 (34%), Positives = 143/281 (50%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ ++ PV + + S+ ALA G H+L L G V+A G N FGQ
Sbjct: 61 WGDNTYGQLGDGTGITQRLPVRVQSLD--SVVALAVGYQHSLALRSDGTVWAWGDNFFGQ 118
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+++ L VV I+ G HHS A+ DG ++ WG N++GQLG A
Sbjct: 119 LGDGSD-AQSQVPIQVWSLNG-VVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVA 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+P +V+ LSG+ A G S+AV GKV +WG G+LG G
Sbjct: 177 S--PLPVQVQGLSGVVALSA--GSTHSLAVLSDGKVKAWGDNYYGQLGDGS--------- 223
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
ST +TP L+ L GVK + AG HS + +G V +G+ ++ P
Sbjct: 224 STERWTPVLVSSLTGVKSVV--AGTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPVPV 281
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + + G H+ L S G + WG+N++G +G G
Sbjct: 282 VVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNG 322
Score = 110 bits (276), Expect = 7e-22, Method: Composition-based stats.
Identities = 92/281 (32%), Positives = 136/281 (48%), Gaps = 20/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R+ PV S + + A++ G AH+L L G V+A G N +GQ
Sbjct: 811 WGGNSQGQLGDGTGITRYVPVRVSGL--NGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQ 868
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + L P+++ GL VV I+ G HHS A+ DG ++ WG N GQLG G K
Sbjct: 869 LGDATST-QRLVPIQVPGLTG-VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQ 926
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V L+G+ + A G S+AV G V +WG G+LG G
Sbjct: 927 RSPPV--QVPGLAGMVS--VAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGT--------- 973
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P I GV IAAA HS + +G V+ +G ++ + + P+
Sbjct: 974 TTQRLLPVPISSSSGV---IAAAANWHSLVVRTDGTVWGWGSNNASQLGDGSTSDRKMPT 1030
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + G H+ L S G ++ WG +G LG G
Sbjct: 1031 PSSVPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDG 1071
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 93/283 (32%), Positives = 137/283 (48%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG G+ S PV ++K +A GG+H+L + G V+A G N G+
Sbjct: 711 WGNNAYGQLGDGT--STLHPVPVQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGE 768
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ GL V +S G +HS A+ DG ++ WG NS GQLG G
Sbjct: 769 LGDGTGLQRP-RPVQVQGLG-SAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGIT 826
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ +V L+G+ A G S+A+ G V +WG G+LG
Sbjct: 827 RYVPV--RVSGLNGVMAVSA--GSAHSLALRSDGTVWAWGYNFYGQLGDAT--------- 873
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
ST P + L GV V I AAG HS + +G V+ +G ++ +G +R
Sbjct: 874 STQRLVPIQVPGLTGV-VSI-AAGTHHSLAVRSDGTVWAWGYNFYGQL--GDGTKIQRSP 929
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V G YH+ + S G ++ WG N +G LG G
Sbjct: 930 PVQVPGLAGMVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDG 972
Score = 108 bits (269), Expect = 5e-21, Method: Composition-based stats.
Identities = 84/247 (34%), Positives = 120/247 (48%), Gaps = 17/247 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G AH+L L G V+A G N +GQLG I L P+R+ L VV ++ GY HS
Sbjct: 42 VAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRL-PVRVQSLD-SVVALAVGYQHS 99
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N GQLG G A +PI +V L+G+ A G S+A+
Sbjct: 100 LALRSDGTVWAWGDNFFGQLGDGSDAQSQVPI--QVWSLNGVVA--IAAGDHHSLALLSD 155
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG + + P ++ L GV +AG HS +
Sbjct: 156 GSVWAWGYNAHGQLGDDT---------TVASPLPVQVQGLSGVVA--LSAGSTHSLAVLS 204
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G+V +GD ++ P L+S L + VV G +H+ L S G + WG N
Sbjct: 205 DGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGVKSVVAGTFHSLALCSDGTVRAWGEN 264
Query: 316 ENGCLGI 322
+G LGI
Sbjct: 265 GSGQLGI 271
Score = 107 bits (267), Expect = 8e-21, Method: Composition-based stats.
Identities = 85/283 (30%), Positives = 135/283 (47%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN D+G++G G++ + PV + +K++A GGAH+L + G +A G + GQ
Sbjct: 311 WGNNDHGQVGNGTISQQLTPVQVPGVGR--MKSIAAGGAHSLAMRADGITWAWGDDSQGQ 368
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ L P R+ G ++ + + TG HS A+ DG ++ WG N+ GQLG G
Sbjct: 369 LGDGQS-SQQLRPARVLG-QRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLP 426
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ +V L+G+ T A S+A G V +WG G+LG G
Sbjct: 427 RTLPV--QVPGLAGVHTLSATT--SHSLAARADGTVWAWGDNAFGQLGDGT--------- 473
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+T P + L GV ++ HS + +G V+ +G ++ +G R
Sbjct: 474 TTQRLLPVQVPGLAGVDT--VSSMHQHSLAVSRDGTVWAWGFNGSGRL--GDGTTLSRLT 529
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V G H+ L + G ++ WG N NG LG G
Sbjct: 530 PVQVPGLSSMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDG 572
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 85/281 (30%), Positives = 131/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ R PV + ++ H+L ++ G V+A G N G+
Sbjct: 461 WGDNAFGQLGDGTTTQRLLPVQVPGLA--GVDTVSSMHQHSLAVSRDGTVWAWGFNGSGR 518
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ GL +V ++ G HS A+ DG ++ WG NSNG LG G
Sbjct: 519 LGDGTTLS-RLTPVQVPGLS-SMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLR 576
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V LSG+ A G+ S+AV G V +WG G G+LG G
Sbjct: 577 RLSPV--QVPGLSGVVALAAGNGY--SLAVDAQGSVWAWGYNGMGQLGDGT--------- 623
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP L GV AAG HS + +G + +G ++ P+
Sbjct: 624 TTPRVTPTQAPALSGVVA--LAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPA 681
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + + G H+ VL + G +WG+N G LG G
Sbjct: 682 AVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDG 722
Score = 101 bits (252), Expect = 4e-19, Method: Composition-based stats.
Identities = 92/280 (32%), Positives = 130/280 (46%), Gaps = 21/280 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P A + ALA G +H+L L G +A G ND GQ
Sbjct: 611 WGYNGMGQLGDGTTTPRVTPTQAPALS--GVVALAAGDSHSLALRADGVAWAWGGNDQGQ 668
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + S P + GL VV ++ G HS + DG WG N+ GQLG G +
Sbjct: 669 LGDATTLERS-TPAAVPGL-AHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDG--TS 724
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+P +V S + K A G S+AV G V +WG GSG LG G
Sbjct: 725 TLHPVPVQVPGPSAM--KGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDG---------- 772
Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T PR + +++G+ +A +AG HS + +G V+ +G + ++ G P
Sbjct: 773 -TGLQRPRPV-QVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVP 830
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+S L V G H+ L S G ++ WG N G LG
Sbjct: 831 VRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLG 870
Score = 99.8 bits (247), Expect = 2e-18, Method: Composition-based stats.
Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG GS P+ + + + A+A G H+L L G V+A G N GQ
Sbjct: 111 WGDNFFGQLGDGSDAQSQVPI--QVWSLNGVVAIAAGDHHSLALLSDGSVWAWGYNAHGQ 168
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ GL VV +S G HS A+ DG++ WG N GQLG G
Sbjct: 169 LGDDTTVASPL-PVQVQGLSG-VVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTE 226
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L+G+ K G S+A+ G V +WG GSG+ LG
Sbjct: 227 RWTPV--LVSSLTGV--KSVVAGTFHSLALCSDGTVRAWGENGSGQ---------LGISS 273
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P ++ L V+ AAG HS + +G V +G+ ++ + P
Sbjct: 274 TTRRPVPVVVPGLTNVQA--LAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPV 331
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + GG H+ + + G + WG + G LG G
Sbjct: 332 QVPGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDG 372
Score = 96.3 bits (238), Expect = 2e-17, Method: Composition-based stats.
Identities = 91/285 (31%), Positives = 132/285 (46%), Gaps = 28/285 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G LG G+ R RPV S A++ G H+L + G V+A G N GQ
Sbjct: 761 WGNNGSGELGDGTGLQRPRPVQVQGL--GSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQ 818
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + P+R+SGL V+ +S G HS A+ DG ++ WG N GQLG
Sbjct: 819 LGDGTGITRYV-PVRVSGLNG-VMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQ 876
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++PI +V L+G+ + A G S+AV G V +WG G+LG G + R
Sbjct: 877 RLVPI--QVPGLTGVVS--IAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTK-----IQR 927
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S P L + AAG HS + NG V+ +G ++ +G +R
Sbjct: 928 SPPVQVPGLAGMVS------VAAGTYHSLAVHSNGTVWAWGYNNHGQL--GDGTTTQR-- 977
Query: 283 LISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +P S +H+ V+ + G ++ WGSN LG G
Sbjct: 978 -LLPVPISSSSGVIAAAANWHSLVVRTDGTVWGWGSNNASQLGDG 1021
Score = 95.5 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 85/283 (30%), Positives = 129/283 (45%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG+ S R PVV +++ALA G AH+L L G V A G ND GQ
Sbjct: 261 WGENGSGQLGISSTTRRPVPVVVPGLT--NVQALAAGSAHSLALRSDGTVRAWGNNDHGQ 318
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + I L P+++ G+ + + I+ G HS A+ DG + WG +S GQLG G+ +
Sbjct: 319 VG-NGTISQQLTPVQVPGVGR-MKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQ 376
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P L G S+A+ G V +WG +G+LG G +
Sbjct: 377 QLRP----ARVLGQRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTD-------- 424
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
P + L GV A HS +G V+ +GD A ++ +G +R
Sbjct: 425 -LPRTLPVQVPGLAGVHTLSATTS--HSLAARADGTVWAWGDNAFGQL--GDGTTTQRLL 479
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + V H+ ++ G ++ WG N +G LG G
Sbjct: 480 PVQVPGLAGVDTVSSMHQHSLAVSRDGTVWAWGFNGSGRLGDG 522
Score = 90.1 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 89/320 (27%), Positives = 130/320 (40%), Gaps = 47/320 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G+ SR PV S+ A+A G H+L L G V+A G N G
Sbjct: 511 WGFNGSGRLGDGTTLSRLTPVQVPGLS--SMVAVAAGSTHSLALRADGTVWAWGDNSNGA 568
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ GL VV ++ G +S A+ G ++ WG N GQLG G
Sbjct: 569 LGDGTTL-RRLSPVQVPGLSG-VVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTP 626
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG------HGQESS 216
+V P T+ LSG+ A G S+A+ G +WG G+LG ++
Sbjct: 627 RVTP--TQAPALSGVVA--LAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPAA 682
Query: 217 ILGFLR---------------------------------STSEYTPRLIKELEGVKVKIA 243
+ G TS P ++ +K
Sbjct: 683 VPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVPGPSAMKGV 742
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
AAG HS + +G V+ +G+ ++ G RP + L + V G H+ +
Sbjct: 743 AAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQVQGLGSAVAVSAGTNHSLAV 802
Query: 304 TSGGELYTWGSNENGCLGIG 323
S G ++ WG N G LG G
Sbjct: 803 QSDGTVWAWGGNSQGQLGDG 822
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 21/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG + + PV + AL+ G H+L + G V A G N +GQ
Sbjct: 161 WGYNAHGQLGDDTTVASPLPVQVQGLS--GVVALSAGSTHSLAVLSDGKVKAWGDNYYGQ 218
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+ +S L V + G HS A+ DG + WG+N +GQLG+
Sbjct: 219 LGDGSST-ERWTPVLVSSLTG-VKSVVAGTFHSLALCSDGTVRAWGENGSGQLGISSTTR 276
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+P V L+ + + A G S+A+ G V +WG G++G+G S L
Sbjct: 277 R--PVPVVVPGLTNV--QALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQL---- 328
Query: 223 STSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TP ++ GV ++K AAG HS + +G + +GD + ++ + + RP
Sbjct: 329 -----TP---VQVPGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRP 380
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + G H+ L + G ++ WG N G LG G
Sbjct: 381 ARVLGQRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDG 422
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LG G+ R PV S+ S A H+L + G V+ G N+ Q
Sbjct: 961 WGYNNHGQLGDGTTTQRLLPVPISS---SSGVIAAAANWHSLVVRTDGTVWGWGSNNASQ 1017
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S + V IS+G +HS A+ DG ++ WG ++GQLG G +
Sbjct: 1018 LGDGSTSDRKMPT--PSSVPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSM 1075
Query: 163 KVIP 166
+++P
Sbjct: 1076 RLVP 1079
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+Q A G S+ + G V +WG G+LG G ++ P ++ L+ V
Sbjct: 40 EQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGT---------GITQRLPVRVQSLDSVV 90
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
A G+ HS + +G V+ +GD ++ ++ P + L + G +H
Sbjct: 91 A--LAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSLNGVVAIAAGDHH 148
Query: 300 TCVLTSGGELYTWGSNENGCLG 321
+ L S G ++ WG N +G LG
Sbjct: 149 SLALLSDGSVWAWGYNAHGQLG 170
Score = 37.4 bits (85), Expect = 8.4, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 36/80 (45%)
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
AAG HS + +G V+ +GD ++ G R P + L + G H+ L
Sbjct: 43 AAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLDSVVALAVGYQHSLAL 102
Query: 304 TSGGELYTWGSNENGCLGIG 323
S G ++ WG N G LG G
Sbjct: 103 RSDGTVWAWGDNFFGQLGDG 122
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 137/282 (48%), Gaps = 12/282 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+ G G ++ P A + + A G ++ F+T G +Y TG ND Q
Sbjct: 42 WGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQ 101
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + +LEP+R+S L+ V ++ G H A+ +G L WG N GQLG G+
Sbjct: 102 LGV-KGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVG 160
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A P ++ + G + A G S+A+T G+V S+G G G LGHG
Sbjct: 161 ASAA-QPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGD-------- 211
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P L++ L + AAG SA + +GRV+ +G ++ E +A P
Sbjct: 212 -VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLP 270
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + +V CG +H LT GE+YTWG + +G LG G
Sbjct: 271 QPVPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQG 312
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 17/254 (6%)
Query: 41 ALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG+ +YG+LG G + S +P V +A G H+L LT +G VY+ G
Sbjct: 144 AAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGS 203
Query: 100 FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FG LG + + +P + L E +V I+ G + S+A+++ G ++ WG+N GQLG G
Sbjct: 204 FGALGHGD-VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNG 262
Query: 159 KKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--- 214
+ +P P + GI Q A G +A+T G+V +WG SG+LG G
Sbjct: 263 EFGNAFLPQP-----VPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGS 317
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
++ G L S P + L ++ +AG HS + +++ G ++ Q
Sbjct: 318 EALNGCLCS-----PSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQLALQS 372
Query: 275 GNHARRPSLISKLP 288
P+ + LP
Sbjct: 373 VPSVALPTRVPGLP 386
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G + + P E+ +ACG H + LT G VY GL+ GQ
Sbjct: 251 WGRNKYGQLGNGEFGNAFLPQPVPGIEQ--AVQVACGDHHCIALTRWGEVYTWGLHSSGQ 308
Query: 103 LGISENIGYSL------EPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQL 155
LG N+G P R+ L + + Q+S G HS ++ +L+ G N GQL
Sbjct: 309 LGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQL 368
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
L ++ + +PT+V L G+ + A + S+AV
Sbjct: 369 AL--QSVPSVALPTRVPGLPGLPMRFAVAAGDHSIAV 403
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 55/257 (21%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
EP+ G+++++ + LY WG++ GQ G G+ P P V+
Sbjct: 14 EPMEADGMERQL-----SWALPELPPAVSSLYTWGRSDLGQTGSGRDQNSTAPEP--VQA 66
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQESSILGFLRS--------- 223
L G AA G S VT G++ + G+ + +LG G+E ++ S
Sbjct: 67 LQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHG 126
Query: 224 ---------------------TSEY-------------TPRLIKELEGVKVKIAAAGFLH 249
++EY PR++K + G AAG H
Sbjct: 127 VACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATH 186
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
S + +G+VY FG+ + + + N+ +P+L+ L + E +V G Y + ++
Sbjct: 187 SLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQAL-WPEAIVSIAAGEYFSAAVSLS 245
Query: 307 GELYTWGSNENGCLGIG 323
G ++TWG N+ G LG G
Sbjct: 246 GRVFTWGRNKYGQLGNG 262
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 137/266 (51%), Gaps = 15/266 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G + G+LG E+ P + + +K +ACG H++ L+E G VY G N+ GQ
Sbjct: 114 FGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQ 173
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ E + SL P ++ KKEVV +S GY+H++ +T DG LY +G+N G+LGL
Sbjct: 174 LGLGEEVENSL-PKKLK-FKKEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQL 231
Query: 163 KVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P V + + G +VA+T G +WG G G+LGHG + L
Sbjct: 232 SNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTK------L 285
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-- 279
+E P+ IK+L G K + G H+A + E+G+V+ FGD K+ E + +
Sbjct: 286 LEVNE--PKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSF 343
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVL 303
P +S+ Y V CGG HT VL
Sbjct: 344 DPVYLSRFNYFNVVYVSCGGCHTLVL 369
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 127/255 (49%), Gaps = 22/255 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHH 134
+ACG H+ +TE+G +Y G ND+GQLG+ + +P + LK E V +++ G +H
Sbjct: 43 MACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLN-KPSFVKPLKPEKVRKVACGRNH 101
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + G+L+ +G N +GQLG K ++ +P ++E + + KQ A G S+ ++
Sbjct: 102 TIVYSESGKLFSFGCNEDGQLGHVDKENEL--LPKEIESIPQMEIKQIACGTYHSIILSE 159
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACI 253
G V WG G+LG G+E P+ +K + E V V + G+ H+A +
Sbjct: 160 DGDVYVWGNNNEGQLGLGEE---------VENSLPKKLKFKKEVVSV---SCGYYHTALV 207
Query: 254 DENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
+G +Y FG+ + K+ ++ P ++ ++E V CG HT +T G
Sbjct: 208 TRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGH 267
Query: 309 LYTWGSNENGCLGIG 323
Y WG G LG G
Sbjct: 268 CYAWGDGSQGQLGHG 282
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 17/201 (8%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VV+++ G HS+ +T G LY++G N GQLGLG K + P+ V+ L ++ A
Sbjct: 40 VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLG--HTKSLNKPSFVKPLKPEKVRKVAC 97
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++ + GK+ S+G G+LGH + +E P+ I+ + +++K A
Sbjct: 98 GRNHTIVYSESGKLFSFGCNEDGQLGH---------VDKENELLPKEIESIPQMEIKQIA 148
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTC 301
G HS + E+G VY++G+ ++ E SL KL + +EVV CG YHT
Sbjct: 149 CGTYHSIILSEDGDVYVWGNNNEGQLGLGE---EVENSLPKKLKFKKEVVSVSCGYYHTA 205
Query: 302 VLTSGGELYTWGSNENGCLGI 322
++T G LYT+G NE G LG+
Sbjct: 206 LVTRDGFLYTFGENELGKLGL 226
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 6/177 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WGN + G+LGLG P F+K + +++CG HT +T G +Y G N+ G
Sbjct: 165 VWGNNNEGQLGLGEEVENSLPKKL-KFKKEVV-SVSCGYYHTALVTRDGFLYTFGENELG 222
Query: 102 QLGISEN-IGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+LG+S + + + P ++ E + +S G H+ AIT G Y WG S GQLG G
Sbjct: 223 KLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHG 282
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
K +V P +++ LSG + G + VT GKV ++G G G+LG G++S
Sbjct: 283 TKLLEVNE-PKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDS 338
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
E+ CG H+ V+T G LY +GSN+ G LG+G
Sbjct: 42 EMACGDEHSAVVTESGRLYVFGSNDWGQLGLG 73
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 28/289 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
GN YG LG G +S P A S+K A G G H L LTE G VY+ G ND+ +
Sbjct: 52 GNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE 111
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +++ L P + + K VV I+ G HHS A+T GE+Y WG N +GQ+G G
Sbjct: 112 LG-NKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTI 170
Query: 161 AAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ V PIP + L+G + G SVAVT G+V SWG G G+LG G
Sbjct: 171 LSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGLG------- 223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TS+ P+ + + ++ G++H+ + + G +Y++G + ++ ++
Sbjct: 224 --NCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLNTDSNVW 281
Query: 280 RPSLISKLPYSE-----EVVCGGYH--TCVLTSGGELYTWGSNENGCLG 321
P +KL E ++V YH + ++ G ++ WG CLG
Sbjct: 282 IP---TKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWGQ----CLG 323
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 115/247 (46%), Gaps = 16/247 (6%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITV 140
TL +T+ VY G N +G LG + ++ P +I L K V + G H A+T
Sbjct: 39 TLLVTKDDMVYGIGNNTYGCLGTGDTQS-TIYPKKIEALCGKSVKTFAYGKGPHVLALTE 97
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+G++Y WG N +LG K+ PT V L F A G S+A+T G++
Sbjct: 98 EGKVYSWGYNDYCELG--NKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIY 155
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGR 258
+WG SG++G G + ST + P+L+ L G KV + G S + ++G
Sbjct: 156 AWGHNVSGQVG-------CGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGE 208
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
VY +G V ++ P ++ E+VVCG HT L+ G LY WG+N
Sbjct: 209 VYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANS 268
Query: 317 NGCLGIG 323
G LG+
Sbjct: 269 YGQLGLN 275
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ G++G G++ S +P+ + + ++CG + ++ +T++G VY+ G N
Sbjct: 157 WGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNG 216
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+ N +EP +++ K V++ + GY H+ A++ +G LY+WG NS GQLGL
Sbjct: 217 VGQLGLG-NCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLN 275
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ IP +V + I + S+A++ G ++ WG
Sbjct: 276 TDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWG 319
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LGLG+ S+ P + F K ++ + CG HTL L++ G +Y G N +GQ
Sbjct: 212 WGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQ 271
Query: 103 LGISENIGYSLEP-LRISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKK 160
LG++ + + L + + + + +++ YHH S A++ ++MWG+ LG+
Sbjct: 272 LGLNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWGQ------CLGQS 325
Query: 161 AAKVIPIPTKVECL 174
+P T ++CL
Sbjct: 326 IK--VPTLTPLKCL 337
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 41/229 (17%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LEP IS ++ +V + + +T D +Y G N+ G LG G + + P K+E
Sbjct: 18 LEPKFISNVRMAIVY-GKAANETLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYP--KKIE 74
Query: 173 CLSGIFTKQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE-YTPR 230
L G K A G +A+T GKV SWG LG+ +ST+E TP
Sbjct: 75 ALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGN----------KSTNEGLTPT 124
Query: 231 LIKELEGVK--VKIAAAGFLHSACIDENGRVYIFGDRAVDKM--------------LFQE 274
L+ + K V IA G HS + G +Y +G ++ L
Sbjct: 125 LVPSVLDDKFVVDIACGGH-HSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNV 183
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G + ++ IS CG + +T GE+Y+WG N G LG+G
Sbjct: 184 GLNGKKVVHIS---------CGDSSSVAVTDSGEVYSWGHNGVGQLGLG 223
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 148/310 (47%), Gaps = 18/310 (5%)
Query: 19 KLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
+LG+ C + S + +WG GD GRLG+ + ++++P V ++ ++ +
Sbjct: 85 RLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASA 142
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
GG H + LTE G VY G FG LG L L K +V +S G HS+A+
Sbjct: 143 GGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAV 202
Query: 139 TVDGELYMWGKNS-NGQLGLGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
T GELY WG++ G+LG G + PTKV+ L GF ++A+T
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFF-TMALTK 261
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ SWG + LGHG ++ + P+++ LE V + A G H+A +
Sbjct: 262 SGQLWSWGGNANHELGHGTRAN---------NWKPKVVAALEDVTLVQVACGGFHAAALT 312
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
++G+V +G ++ + + P+++ + + CG T +T G+LYTW
Sbjct: 313 QDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTW 372
Query: 313 GSNENGCLGI 322
G N + LGI
Sbjct: 373 GKNRDYQLGI 382
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 37/305 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA------------------CGGAHTL 84
WG G +G++G GS ++ PV+ S + + +A CG H++
Sbjct: 40 WGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSV 99
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
E V+ G D G+LGI +P ++ K V S G H+ A+T G +
Sbjct: 100 LFAEQD-VFVWGKGDGGRLGIDTEFN-QYKPY-VNPRIKRVQMASAGGLHNIALTEVGNV 156
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
Y WG + G LG G +++P L G + + + G S AVT G++ +W
Sbjct: 157 YTWGYGAFGALGHGSYERELLP-----RLLEGPWKDRIVHVSAGGSHSAAVTESGELYTW 211
Query: 202 GAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G G GRLGHG + + P ++ L+ + GF + + ++G+++
Sbjct: 212 GRDEGEGRLGHGNPD----IMDEGALSRPTKVQALDVPIASVYCGGFF-TMALTKSGQLW 266
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+G A ++ + +P +++ L +V CGG+H LT G++ TWG NG
Sbjct: 267 SWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNG 326
Query: 319 CLGIG 323
LG G
Sbjct: 327 QLGHG 331
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG LG G+ + W+P V +A E +L +ACGG H LT+ G V G GQ
Sbjct: 268 WGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQ 327
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GKK 160
LG + EP + + K I+ G ++AIT +G+LY WGKN + QLG+ G K
Sbjct: 328 LG-HGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLK 386
Query: 161 AAKVIPI 167
++ P+
Sbjct: 387 DEQLDPV 393
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI---PTKVECLSGIFTKQAALGFEQ--- 188
SS + E++ WG+ ++GQ+G G + + +P+ K+ +G+ Q + +
Sbjct: 28 SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87
Query: 189 SVAVTGG---------GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+V VT G V WG G GRLG E ++Y P + ++ +
Sbjct: 88 NVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTE---------FNQYKPYVNPRIK--R 136
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVV-- 294
V++A+AG LH+ + E G VY +G A + G+ + L+ +L P+ + +V
Sbjct: 137 VQMASAGGLHNIALTEVGNVYTWGYGAFGAL----GHGSYERELLPRLLEGPWKDRIVHV 192
Query: 295 -CGGYHTCVLTSGGELYTWGSNE-NGCLGIG 323
GG H+ +T GELYTWG +E G LG G
Sbjct: 193 SAGGSHSAAVTESGELYTWGRDEGEGRLGHG 223
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G+LE+ P + A + +ACG A T +TE G +Y G N Q
Sbjct: 320 WGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQ 379
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
LGI L+P+ +VQ H + + V G
Sbjct: 380 LGIPGLKDEQLDPV--------LVQFPQALHEKTPVEVLG 411
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 139/267 (52%), Gaps = 23/267 (8%)
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRI 118
+ P VCS + + LACG HT F+ + G +Y G N G+LGI +++ S +P +
Sbjct: 13 YYPRVCSF--QIVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLV 70
Query: 119 SGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
S L K +V+Q+S G+ H+ AI GEL+ WG +S GQLG+ + P L GI
Sbjct: 71 SALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGI 130
Query: 178 --FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
F + G+ +VAV G+V S+G+G G+LG G ++ +Y P L+ L
Sbjct: 131 NTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQN---------KQYKPFLLNSL 181
Query: 236 -EGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHARRPSLISKLPYSE- 291
+ +KVK GF H+ +DE+GRVY G D EGN P L+ +L +S
Sbjct: 182 SQIIKVK---CGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGN-ISSPRLVLELEHSFI 237
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENG 318
+ + G H+ +T E+Y +G ++ G
Sbjct: 238 KKIFAGSHSAAITDANEIYFFGKSQLG 264
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 142/288 (49%), Gaps = 30/288 (10%)
Query: 44 GNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G+ G+LG+G SL++ ++P + SA K+ + ++CG +HT + ++G +++ G + G
Sbjct: 47 GSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEG 106
Query: 102 QLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
QLGI+ N G P ++ G+ V +S GY+H+ A+ +G++ +G GQLG
Sbjct: 107 QLGINSN-GSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLG 165
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P + LS I + GF ++ + G+V S G G+LG G
Sbjct: 166 TGNQNKQYKPFL--LNSLSQII--KVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEG 221
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ +PRL+ ELE +K AG HSA I + +Y FG + + L+
Sbjct: 222 NIS--------SPRLVLELEHSFIKKIFAG-SHSAAITDANEIYFFGKSQLGQFLY---- 268
Query: 277 HARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L+ E+ G + +T G++Y+WG N+ G LG G
Sbjct: 269 ----PQLVRICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQG 312
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
R+ + + Q++ G H++ + +G LY G N+ G+LG+G+++ + P V LS
Sbjct: 16 RVCSFQIVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSK 75
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--E 234
Q + G + A+ G++ SWG G+ LG + S Y P+L+ +
Sbjct: 76 YKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQ---------LGINSNGSHYNPQLVNFSD 126
Query: 235 LEGVK--VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
L+G+ V + G+ H+ + +NG+V FG ++ N +P L++ L +
Sbjct: 127 LKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSLSQIIK 186
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V CG YHT L G +Y+ G N+ G LG G
Sbjct: 187 VKCGFYHTLFLDESGRVYSCGLNDEGQLGQG 217
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G+LG G+ +++P + ++ + + + CG HTLFL E+G VY+ GLND GQ
Sbjct: 156 FGSGKKGQLGTGNQNKQYKPFLLNSLSQ--IIKVKCGFYHTLFLDESGRVYSCGLNDEGQ 213
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N G P + L+ ++ HS+AIT E+Y +GK+ GQ
Sbjct: 214 LGQGHNEGNISSPRLVLELEHSFIKKIFAGSHSAAITDANEIYFFGKSQLGQF------- 266
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P V G + ++G VAVT GKV SWG G+LG G
Sbjct: 267 ---LYPQLVRICQGD-VNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGD--------- 313
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDE--NGRVYIFGDRAVDKMLFQEGNHARR 280
S P L++ L KV A G + C+ + N R+ + KML +
Sbjct: 314 SDVRIIPSLVEPLNEKKVISATCGENYVICLGQVMNSRLAKLASQK--KMLKFQSPDNNN 371
Query: 281 PSLIS 285
SLI+
Sbjct: 372 NSLIN 376
>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
niloticus]
Length = 1536
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 163/322 (50%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++LK DI L G + + + F ++G+ ++G+LGLGS + +P A +
Sbjct: 29 SKFWLKNDIPLRIACGDEHTALITENGKLF--MFGSNNWGQLGLGSKVTVNKPTCVKALK 86
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
++ +ACG HTL T G VYA+G N GQLG+ + S + L + + +
Sbjct: 87 SEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKML 146
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G + S+A+TV G+L+MWG N+ GQ+GLGK++ + + E G + G+
Sbjct: 147 AAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQ----VSSPQEVSVGQPISWVSCGYYH 202
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G + ++G SG+LG LG + P+L+K ++ V+ A G
Sbjct: 203 SALVTVDGALYTFGERDSGKLG-------LGTHQLPGHRVPQLVKSIKE-PVRQVACGGG 254
Query: 249 HSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E G VY FG ++ +F+ +R P L+ +VVCG HT
Sbjct: 255 HTVALAE-GNVYTFGLGQFGQLGHGTFIFE----SRVPRLVEHFKKGRACQVVCGENHTA 309
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
V+T G LYT+G +G LG+G
Sbjct: 310 VITEDGLLYTFGDGRHGKLGLG 331
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Query: 43 WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G D G+LGLG+ L P + + K ++ +ACGG HT+ L E G VY GL F
Sbjct: 215 FGERDSGKLGLGTHQLPGHRVPQLVKSI-KEPVRQVACGGGHTVALAE-GNVYTFGLGQF 272
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG I S P + KK Q+ G +H++ IT DG LY +G +G+LGLG+
Sbjct: 273 GQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRHGKLGLGE 332
Query: 160 K 160
+
Sbjct: 333 E 333
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + ++++P +C F K++++ CGG H + L
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCGGCHMVVL 365
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 140/273 (51%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E + ++CG H+L + G V+A G GQL
Sbjct: 20 GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 79
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WGKNS+GQLGLGK+
Sbjct: 80 GIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFP 139
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 140 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------ALSGNNA 192
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+ L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 193 PVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGPQ 252
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 253 LVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 124/250 (49%), Gaps = 18/250 (7%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA 137
G H+L L G V + G N GQLG + +P RI L+ V +S G HS A
Sbjct: 3 GEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLHVALVSCGKEHSLA 61
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+ G ++ WG S GQLG+G+ IP K++ L+ I Q A G S+A++ G+
Sbjct: 62 VCHKGRVFAWGAASEGQLGIGELKETTF-IPKKIKTLADIKIIQVACGHYHSLALSEDGQ 120
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS + +G
Sbjct: 121 VFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 172
Query: 258 RVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
+ +G ++ GN+A +P L+ L V CG HT VLT G+++T
Sbjct: 173 TSFGWGSNNAGQLALS-GNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFT 231
Query: 312 WGSNENGCLG 321
+G N G LG
Sbjct: 232 FGDNSYGQLG 241
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G+LG+G L E+ + P + +ACG H+L L+E G V++
Sbjct: 67 RVFA--WGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSW 124
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 125 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 184
Query: 155 LGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L A V P V L + + G+E + +T GKV ++G G+LGH
Sbjct: 185 LALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDS 244
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ +EG+ +I + A + G+V FG
Sbjct: 245 TAEKRG---------PQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+G HHS + DG + G NS GQ LG+K P ++ L + + G E S
Sbjct: 2 SGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERIPALETLHVALVSCGKEHS 59
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+AV G+V +WGA G+LG G+ L+ T+ + P+ IK L +K+ A G H
Sbjct: 60 LAVCHKGRVFAWGAASEGQLGIGE-------LKETT-FIPKKIKTLADIKIIQVACGHYH 111
Query: 250 SACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
S + E+G+V+ +G + ++ F +R + +P + +V GG H+ L+
Sbjct: 112 SLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAHSFALSL 170
Query: 306 GGELYTWGSNENGCLGIG 323
G + WGSN G L +
Sbjct: 171 SGTSFGWGSNNAGQLALS 188
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G + G N+ G
Sbjct: 124 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 183
Query: 102 QLGISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ + LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 184 QLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHD 243
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG-GSGRLG-HGQ--- 213
A K P VE + G+ ++ + V G+V+S+G G G R H +
Sbjct: 244 STAEKR--GPQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRGPGCTRSSPHPEALA 301
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
ESS + L S + +LE V+VK AG
Sbjct: 302 ESSDVSCLISAN--------DLEDVQVKHIFAG 326
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 29/292 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +RP+ A + +K ACG HTL TE G VYATG N+ G
Sbjct: 54 MFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 113
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L S + ++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 114 QLGLGDTEERNSFHLISFFTS--RHKIKQLSAGANISAALTEDGELFMWGDNSEGQIGLN 171
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P V G + G+ S VT GK+ ++G G+LG E I
Sbjct: 172 SISNVYVPRQVTV----GKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLI- 226
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQ 273
+ P+L+ + +++A G H+ + E VY FG ++ +FQ
Sbjct: 227 ------NHRKPQLVSGISEKVIQVACGGG-HTVVLTEKA-VYTFGQGRFGQLGLGSFIFQ 278
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A P+++ + + + CG HT ++T G +YT+G +G LG+G
Sbjct: 279 ----APEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLGLG 326
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 130/261 (49%), Gaps = 36/261 (13%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
L+CG HT +T +Y G N++GQLG+ S++ Y P+ + LK E V+++ G +
Sbjct: 36 LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVY--RPICVKALKSEKVKLAACGRN 93
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
H+ T G +Y G N+ GQLGLG + L FT KQ + G
Sbjct: 94 HTLVSTEGGNVYATGGNNEGQLGLGDTEER------NSFHLISFFTSRHKIKQLSAGANI 147
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S A+T G++ WG G++G S++ Y PR + G + + G+
Sbjct: 148 SAALTEDGELFMWGDNSEGQIGLNSISNV---------YVPRQV--TVGKPISWISCGYY 196
Query: 249 HSACIDENGRVYIFGDRAVDKM-LFQEG--NHARRPSLISKLPYSEEVV---CGGYHTCV 302
HSA + G++Y FG+ K+ L E NH R+P L+S + SE+V+ CGG HT V
Sbjct: 197 HSAFVTMEGKLYTFGEPECGKLGLPSEQLINH-RKPQLVSGI--SEKVIQVACGGGHTVV 253
Query: 303 LTSGGELYTWGSNENGCLGIG 323
LT +YT+G G LG+G
Sbjct: 254 LTEKA-VYTFGQGRFGQLGLG 273
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 20/235 (8%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
++G V+ FG+ ++ENI P + + +S G H++ IT + +LYM+
Sbjct: 6 DSGAVFT-----FGKTRLAENI-----PSKFWFKNDVPIYLSCGDEHTALITGNNKLYMF 55
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N+ GQLGLG K+A PI V+ L K AA G ++ T GG V + G G
Sbjct: 56 GSNNWGQLGLGSKSAVYRPIC--VKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 113
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G F S +T R K+K +AG SA + E+G ++++GD +
Sbjct: 114 QLGLGDTEERNSF-HLISFFTSRH-------KIKQLSAGANISAALTEDGELFMWGDNSE 165
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ ++ P ++ + CG YH+ +T G+LYT+G E G LG+
Sbjct: 166 GQIGLNSISNVYVPRQVTVGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGL 220
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F K + +ACGG H L
Sbjct: 315 FGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGCHMLIF 360
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 138/279 (49%), Gaps = 19/279 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +YG+LG ES P ++ S + + +K + CGG H+ +T +G + G G
Sbjct: 13 WGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCG 72
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ + + + P R+ K V+ +S HS+AI DG LY WG N +G+LG+G
Sbjct: 73 QLGLGD-LKDIVIP-RVMTSIKNVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLN 130
Query: 162 AKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P VE L + + G + +T K +WG G GRLGHG + +
Sbjct: 131 VNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDV 190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
YTP+LI+ L G+ VK G H+A + NG+VY G A K+ F
Sbjct: 191 ---------YTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKED 241
Query: 278 ARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWG 313
P L+ + +EV G H+ V+T+ G++YTWG
Sbjct: 242 IYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWG 280
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 118/237 (49%), Gaps = 14/237 (5%)
Query: 92 VYATGLNDFGQLG-ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWG 148
V A G +++GQLG I E ++EP I L + ++ G HHS+ IT GEL +WG
Sbjct: 10 VVAWGSSEYGQLGAIYEE--SNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWG 67
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
GQLGLG K I IP + + + + S A+ G++ +WG SG+
Sbjct: 68 YGGCGQLGLGD--LKDIVIPRVMTSIKNVI--NVSCSDRHSAAILEDGRLYTWGCNKSGK 123
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LG G S+ L + TP+L+++L KV + G H+AC+ + + Y +G
Sbjct: 124 LGIG---SLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQG 180
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + N P LI L + +VCGG+HT +L + G++Y G G LG G
Sbjct: 181 RLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFG 237
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG G GRLG G + P + + S+K + CGG HT L G VY G
Sbjct: 171 AYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGA 230
Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG- 156
FG+LG E+I Y + L+ S K + ++S GY HS+ IT G++Y WG+ G+LG
Sbjct: 231 FGKLGFGSKEDI-YIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQ--GGRLGH 287
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ I P VE L+ I + G +V ++ G V +WG + LGHG
Sbjct: 288 IYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGV--TRNLGHG 341
>gi|159486867|ref|XP_001701458.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271640|gb|EDO97455.1| predicted protein [Chlamydomonas reinhardtii]
Length = 591
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 152/340 (44%), Gaps = 58/340 (17%)
Query: 38 RFAALWGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R +GN D+GRLGLG +L S P V A ++ L+ LA GGAHT+ +T G V+
Sbjct: 3 RLLVAFGNADHGRLGLGATTLSSVMTPRVNLALARYDLENLAAGGAHTVVVTRGGLVFTF 62
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GLN GQLG S + EP + L + V ++ G H++ +T G +Y +G N++GQL
Sbjct: 63 GLNTRGQLGHSAEADSAAEPGNVL-LPEPVAAVAAGDAHTACLTESGRVYTFGCNASGQL 121
Query: 156 GLGKKAAKVIP-------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+G+ A IP P VE L+G A G S+AVT G++ +WG G GR
Sbjct: 122 GVGRDA---IPGGRSHSARPMLVEALTGQRVVSVAAGAAHSLAVTDSGRLYAWGLGDHGR 178
Query: 209 LGHGQESSILGFLRSTS------------------------------EYTPRLI--KELE 236
LG G S S+ E+ PR + L
Sbjct: 179 LGLGPPPSAASSSNSSCGSDGSSDSSSDRTSSSSSCSEGGGARSPWVEWLPRAVTTAALG 238
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----------LFQEGNHARRPSL-- 283
G K AG SAC+DE GRVY +G A+ ++ + P L
Sbjct: 239 GSKPAEVFAGPATSACMDEAGRVYTWGFGALHQLGHGAGAAAGGGGRATPDDEWEPRLVD 298
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + + GG H + ++ WGS+ +G +G
Sbjct: 299 VSSLRRTRRLALGGAHALACRTDERVHVWGSDPSGIGSLG 338
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 89/257 (34%), Gaps = 74/257 (28%)
Query: 43 WGNGDYGRLGLGS------------------------------------LESRW-----R 61
WG GD+GRLGLG S W R
Sbjct: 171 WGLGDHGRLGLGPPPSAASSSNSSCGSDGSSDSSSDRTSSSSSCSEGGGARSPWVEWLPR 230
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI------------SENI 109
V +A + G A + + E G VY G QLG + +
Sbjct: 231 AVTTAALGGSKPAEVFAGPATSACMDEAGRVYTWGFGALHQLGHGAGAAAGGGGRATPDD 290
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG----------QLGLGK 159
+ + +S L++ +++ G H+ A D +++WG + +G LGLG
Sbjct: 291 EWEPRLVDVSSLRR-TRRLALGGAHALACRTDERVHVWGSDPSGIGSLGMMPGSGLGLGP 349
Query: 160 K------AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+A VIP PT FT AA G S V+ GK+ +WG GG+
Sbjct: 350 APGPLPGSAVVIPAPTIFRWW---FTDVAA-GLAHSAGVSSDGKLFAWGWGGAVSSAGAL 405
Query: 214 ESSILGFLRSTSEYTPR 230
+ L Y+PR
Sbjct: 406 QLPRLAAPGQEEAYSPR 422
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 128/286 (44%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +G+LG G+ + S PV ++ AL+ GG H L +T G A G N +G
Sbjct: 117 WGDNAFGQLGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWG 176
Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG S P+ ++ + ++ G HS A+T G WG NS+GQLG G
Sbjct: 177 QLGDGSTT-RSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTA 235
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
IP+ + +G A G S+A+T GG VL+WGA GSG+LG G
Sbjct: 236 TDSSIPV--AADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGT------- 286
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+TS TP + G V AAG HS + G V +GD ++ H+
Sbjct: 287 --TTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSST 344
Query: 281 PSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +P V G H+ +TS WG N G LG G
Sbjct: 345 PVAV-NVPAGTTITAVATGSGHSLAVTSTDTALAWGDNTFGQLGDG 389
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 118/285 (41%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G+ PV + ++ A+A G H+L +T G A G N FGQ
Sbjct: 65 WGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQ 124
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG I S P+ + V +S G H+ A+T G WG N GQLG G
Sbjct: 125 LGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTT 184
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ V +G A G S+AVT G L+WG SG+LG G
Sbjct: 185 RSRTPV--AVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGT-------- 234
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T P G + AAG LHS + G V +G ++ + P
Sbjct: 235 -ATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTP 293
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +P V GG H+ +TS G++ WG N G LG G
Sbjct: 294 VAV-DVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDG 337
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 111/267 (41%), Gaps = 21/267 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG GS PV + ++ A+A G H+L +T G A G N GQ
Sbjct: 170 WGDNFWGQLGDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQ 229
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S+ + ++ G HS A+T G++ WG N +GQLG G +
Sbjct: 230 LGDGTATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTS 289
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ V+ +G A G S+AVT G VL+WG +G+LG G
Sbjct: 290 SSTPV--AVDVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGS--------- 338
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + G + A G HS + +G D Q G+ + S
Sbjct: 339 TTHSSTPVAVNVPAGTTITAVATGSGHSLAVTSTDTALAWG----DNTFGQLGDGSTTSS 394
Query: 283 LIS---KLPYSEEVVC---GGYHTCVL 303
+I LP V G +H+ +
Sbjct: 395 IIPVAVDLPAGTTVTAIAGGSFHSLAI 421
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 72/185 (38%), Gaps = 14/185 (7%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G WG NS G+LG G P+ V +G A G S+AVT G L+W
Sbjct: 60 GTGLAWGTNSAGRLGDGTTTDSSSPV--SVNVPAGTTITAVAGGAGHSLAVTSAGTALAW 117
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LG G S TP + G V + G +H+ + G
Sbjct: 118 GDNAFGQLGDGTTIP--------SSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALA 169
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENG 318
+GD ++ +R P + +P V G H+ +TS G WG N +G
Sbjct: 170 WGDNFWGQLGDGSTTRSRTPVAV-NVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSG 228
Query: 319 CLGIG 323
LG G
Sbjct: 229 QLGDG 233
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 140/285 (49%), Gaps = 17/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + + +ACG +H L +T G V++ G N GQ
Sbjct: 106 WGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 165
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I + V I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 166 LGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 224
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ IP KV ++G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 225 DRL--IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL--- 279
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + + G+ H+ + +G++Y +G ++ + P
Sbjct: 280 ------VPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSP 333
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ P ++VV CG HT LT +++WG +G LG G
Sbjct: 334 VQVN-FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHG 377
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 20/289 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
WG G+ G+LG G E R P V +A + +A CG HT + E +Y+ G
Sbjct: 49 WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 108
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
DFG+LG N P I L+ + QI+ G H A+TV G ++ WG+N NGQLG
Sbjct: 109 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 167
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LG + +P K++ G+ K A G E + AVT G + WG G G LG G
Sbjct: 168 LGNTEDSL--LPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 225
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
L P + + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 226 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 276
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + ++ G HT L + G+LY WG N+ G +G+G
Sbjct: 277 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVG 325
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 92/172 (53%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG + R P S+ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 210 WGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQ 269
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ LK + QIS G+ H+ A+ DG+LY WG N GQ+G+G
Sbjct: 270 LGHGDFEDH-LVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNE 328
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
P+ + Q A G+ ++A+T V SWG G SG+LGHG+
Sbjct: 329 DHCSPVQVNFPNEQKVV--QVACGWRHTLALTEAKNVFSWGRGTSGQLGHGE 378
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ VV IS G HS A+ G + WG+ +GQLG G A+ P+PT L+ F
Sbjct: 24 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD--AEDRPVPT---VLTAAFDD- 77
Query: 182 AALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
A G SV + G ++ SWG G GRLGHG S + + P+
Sbjct: 78 -APGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDV---------FNPQP 127
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
I+ L+GV++ A G H + G V+ +G ++ + P I
Sbjct: 128 IQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR 187
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + G HT +T G+LY WG G LG+G
Sbjct: 188 VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 221
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + ++ ++ G HT+ L G +Y G N FGQ+G+ +
Sbjct: 267 YGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGD 326
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N + P++++ +++VVQ++ G+ H+ A+T ++ WG+ ++GQLG G+ + IP
Sbjct: 327 NEDH-CSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIP 385
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
G KQ E S AV KV
Sbjct: 386 KMIDALSSDGSACKQ----LESSKAVPMSAKV 413
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 140/285 (49%), Gaps = 17/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + + +ACG +H L +T G V++ G N GQ
Sbjct: 101 WGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 160
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I + V I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 161 LGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 219
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ IP KV ++G A G+ ++ V+ G + ++G G+LGHG L
Sbjct: 220 DRL--IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL--- 274
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L+ + + G+ H+ + +G++Y +G ++ + P
Sbjct: 275 ------VPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSP 328
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ P ++VV CG HT LT +++WG +G LG G
Sbjct: 329 VQVN-FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHG 372
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 20/289 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
WG G+ G+LG G E R P V +A + +A CG HT + E +Y+ G
Sbjct: 44 WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 103
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
DFG+LG N P I L+ + QI+ G H A+TV G ++ WG+N NGQLG
Sbjct: 104 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 162
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LG + +P K++ G+ K A G E + AVT G + WG G G LG G
Sbjct: 163 LGNTEDSL--LPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
L P + + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 221 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + ++ G HT L + G+LY WG N+ G +G+G
Sbjct: 272 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVG 320
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 92/172 (53%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG + R P S+ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 205 WGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ LK + QIS G+ H+ A+ DG+LY WG N GQ+G+G
Sbjct: 265 LGHGDFEDH-LVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNE 323
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
P+ + Q A G+ ++A+T V SWG G SG+LGHG+
Sbjct: 324 DHCSPVQVNFPNEQKVV--QVACGWRHTLALTEAKNVFSWGRGTSGQLGHGE 373
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ VV IS G HS A+ G + WG+ +GQLG G A+ P+PT L+ F
Sbjct: 19 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD--AEDRPVPT---VLTAAFDD- 72
Query: 182 AALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
A G SV + G ++ SWG G GRLGHG S + + P+
Sbjct: 73 -APGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDV---------FNPQP 122
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
I+ L+GV++ A G H + G V+ +G ++ + P I
Sbjct: 123 IQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR 182
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + G HT +T G+LY WG G LG+G
Sbjct: 183 VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 216
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
YG+LG G E P A + ++ ++ G HT+ L G +Y G N FGQ+G+ +
Sbjct: 262 YGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGD 321
Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N + P++++ +++VVQ++ G+ H+ A+T ++ WG+ ++GQLG G+ + IP
Sbjct: 322 NEDH-CSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIP 380
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
G KQ E S AV KV
Sbjct: 381 KMIDALSSDGSACKQ----LESSKAVPMSAKV 408
>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
Length = 1019
Score = 124 bits (311), Expect = 6e-26, Method: Composition-based stats.
Identities = 89/289 (30%), Positives = 146/289 (50%), Gaps = 23/289 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL LTE G VYA G N+ G
Sbjct: 103 MFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHTLVLTEEGKVYAAGGNNEG 162
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + P+ + ++ Q+S G + S+A+TVDG L+MWG NS GQ+GL K
Sbjct: 163 QLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGL--K 220
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ ++G G+LG ++ +
Sbjct: 221 NVPNVCVPHQVTV--GKPIAWISCGYYHSAFVTMEGELYTFGETECGKLGLPRQLLM--- 275
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
+ P+L+ + +++A G H+ + E VY FG + +F+
Sbjct: 276 ----NHKVPQLVPGIPEKVIQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFIFETA 329
Query: 276 N-HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P K+ Y + CG HT ++T G +YT+G +G LG+G
Sbjct: 330 EPKILEPIKDQKIIY---ISCGENHTALITDVGLMYTFGDGRHGKLGLG 375
Score = 99.8 bits (247), Expect = 2e-18, Method: Composition-based stats.
Identities = 80/258 (31%), Positives = 120/258 (46%), Gaps = 30/258 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
LACG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 85 LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVS-KPTCVKALKPEKVKFAACGRNH 143
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ +T +G++Y G N+ GQLGLG + P C FT KQ + G S
Sbjct: 144 TLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPI---CF---FTSQHQLKQLSAGSNTS 197
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G + WG G++G ++ P + G + + G+ H
Sbjct: 198 AALTVDGNLFMWGDNSEGQIGLKNVPNVC---------VPHQVT--VGKPIAWISCGYYH 246
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
SA + G +Y FG+ K+ NH + P L+ +P +V CGG HT VLT
Sbjct: 247 SAFVTMEGELYTFGETECGKLGLPRQLLMNH-KVPQLVPGIPEKVIQVACGGGHTVVLTE 305
Query: 306 GGELYTWGSNENGCLGIG 323
+YT+G + G LG+G
Sbjct: 306 KA-VYTFGLGQFGQLGLG 322
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 20/235 (8%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
++G V+ FG+ +ENI P + ++ G H++ IT + +LYM+
Sbjct: 55 DSGAVFT-----FGKTKFAENI-----PSKFWFKNDIPTYLACGDEHTAIITGNNKLYMF 104
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N+ GQLGLG ++ + PT V+ L K AA G ++ +T GKV + G G
Sbjct: 105 GSNNWGQLGLGSRS--TVSKPTCVKALKPEKVKFAACGRNHTLVLTEEGKVYAAGGNNEG 162
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G F + +K+L +AG SA + +G ++++GD +
Sbjct: 163 QLGLGDTEDRNTFHPICFFTSQHQLKQL--------SAGSNTSAALTVDGNLFMWGDNSE 214
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ + + P ++ + CG YH+ +T GELYT+G E G LG+
Sbjct: 215 GQIGLKNVPNVCVPHQVTVGKPIAWISCGYYHSAFVTMEGELYTFGETECGKLGL 269
Score = 67.4 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 43 WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G + G+LGL L + P + + ++ +ACGG HT+ LTE VY GL F
Sbjct: 259 FGETECGKLGLPRQLLMNHKVPQLVPGIPEKVIQ-VACGGGHTVVLTEKA-VYTFGLGQF 316
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ I + EP + +K ++++ IS G +H++ IT G +Y +G +G+LGLG
Sbjct: 317 GQLGLGTFIFETAEPKILEPIKDQKIIYISCGENHTALITDVGLMYTFGDGRHGKLGLGM 376
Query: 160 KAAKVIPIPT 169
+ IPT
Sbjct: 377 ENFTNQFIPT 386
Score = 42.0 bits (97), Expect = 0.35, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 14/75 (18%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P +CS F + ++ +ACGG H + V+AT
Sbjct: 364 FGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACGGCHMI-------VFAT----- 411
Query: 101 GQLGISENIGYSLEP 115
+LGI+E I P
Sbjct: 412 PRLGIAEEIDEMYSP 426
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 144/286 (50%), Gaps = 26/286 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS +S PV + A++ G H+L L G V+A G N GQ
Sbjct: 20 WGGNALGQLGDGSSDSHSEPVRVRGLSG--VVAVSAGEGHSLALHRDGTVWAWGDNALGQ 77
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +S EP+R+ GL VV +S G +HS A+ DG ++ WG N++ QLG G A
Sbjct: 78 LGDGTSDSHS-EPVRVPGLSG-VVAVSAGDNHSLALRSDGSVWAWGDNNSDQLG-GAPGA 134
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P ++E LS + A G S+AV G V +WG +G+LG G IL
Sbjct: 135 QSYSVPWRLEDLSEVVA--VAAGGNHSLAVRADGTVWAWGDNFAGQLGDGN---IL---- 185
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-----H 277
T+ + P+ ++ L GV A+AG+ HS +G V+ +G+ ++ GN +
Sbjct: 186 -TTRWLPKQVQGLSGVVA--ASAGWAHSMVALSDGSVWAWGNNTSGQL----GNGISVGY 238
Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V GG ++ L S G L+ WGSN++G G G
Sbjct: 239 GALPEQVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDG 284
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 136/281 (48%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+L GS PV E + A+A G H+L + G V+A G N GQ
Sbjct: 373 WGYNHDGQLAHGSTNDS--PVPLHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQ 430
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ S EP+R+ GL V +S G +HS A DG ++ WG NS GQLG G +
Sbjct: 431 LG-DGSLSSSAEPVRVQGLSG-VAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSN 488
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++P+ +V LSG+ T A GF S+A G + +WG +G+LG G S+
Sbjct: 489 ALVPV--RVRGLSGVETISA--GFNHSLARASDGGLWAWGGNYTGQLGDGTTSN------ 538
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L GV A G HS + +G V+ +G + ++ N + P
Sbjct: 539 ---SSVPVRVQGLSGVAAVFA--GLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPV 593
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L E V G H+ + S G +++WG+N +G LG G
Sbjct: 594 RVQGLSGMETVAAGSLHSLSVGSDGSMWSWGNNHHGQLGHG 634
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 19/282 (6%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG G+ L +RW P + A + G AH++ G V+A G N G
Sbjct: 171 WGDNFAGQLGDGNILTTRWLPKQVQGLSG--VVAASAGWAHSMVALSDGSVWAWGNNTSG 228
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++GY P ++ GL+ V+ ++ G +S A+ DG L+ WG N +GQ G G
Sbjct: 229 QLGNGISVGYGALPEQVQGLRG-VMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTV 287
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +V LSG+ A G S+AV G + +WGA G+LG G
Sbjct: 288 --YLSSSVRVRWLSGVVAMAA--GSAHSLAVRSDGTLWAWGANYYGQLGDGTR------- 336
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TP+ ++ L +V AAG HS + +G V+ +G ++ N + P
Sbjct: 337 --KDHDTPKRVQGLS--RVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVP 392
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +L V G H+ + S G ++ WG N G LG G
Sbjct: 393 LHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDG 434
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 121/251 (48%), Gaps = 21/251 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G H+L L G V+A G N GQLG + +S EP+R+ GL VV +S G HS
Sbjct: 1 MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHS-EPVRVRGLSG-VVAVSAGEGHS 58
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N+ GQLG G + P+ +V LSG+ A G S+A+
Sbjct: 59 LALHRDGTVWAWGDNALGQLGDGTSDSHSEPV--RVPGLSGVVAVSA--GDNHSLALRSD 114
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG S +LG G + S P +++L +V AAG HS +
Sbjct: 115 GSVWAWGDNNSDQLG--------GAPGAQSYSVPWRLEDLS--EVVAVAAGGNHSLAVRA 164
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR---PSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+G V+ +GD ++ +GN P + L G H+ V S G ++ W
Sbjct: 165 DGTVWAWGDNFAGQL--GDGNILTTRWLPKQVQGLSGVVAASAGWAHSMVALSDGSVWAW 222
Query: 313 GSNENGCLGIG 323
G+N +G LG G
Sbjct: 223 GNNTSGQLGNG 233
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 135/284 (47%), Gaps = 22/284 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +S PV + A++ G H+L L G V+A G N+ Q
Sbjct: 70 WGDNALGQLGDGTSDSHSEPVRVPGLSG--VVAVSAGDNHSLALRSDGSVWAWGDNNSDQ 127
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P R+ L EVV ++ G +HS A+ DG ++ WG N GQLG G
Sbjct: 128 LGGAPGAQSYSVPWRLEDLS-EVVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILT 186
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P +V+ LSG+ A G+ S+ G V +WG SG+LG+G +G+
Sbjct: 187 TRW-LPKQVQGLSGVVAASA--GWAHSMVALSDGSVWAWGNNTSGQLGNGIS---VGY-- 238
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L GV AAG L+S + +G ++ +G D +G+ S
Sbjct: 239 ---GALPEQVQGLRGVMA--VAAGGLYSLALRSDGTLWAWGSN--DHGQRGDGSTVYLSS 291
Query: 283 LISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ + VV G H+ + S G L+ WG+N G LG G
Sbjct: 292 SV-RVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDG 334
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ + PV + A+ G H+L + G V+A G+N FGQ
Sbjct: 523 WGGNYTGQLGDGTTSNSSVPVRVQGLSG--VAAVFAGLNHSLAVRTDGSVWAWGINSFGQ 580
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+R+ GL + ++ G HS ++ DG ++ WG N +GQLG G
Sbjct: 581 LG-EGTTNTSFAPVRVQGLSG-METVAAGSLHSLSVGSDGSMWSWGNNHHGQLGHGLPGR 638
Query: 163 KVIPI 167
P+
Sbjct: 639 SPTPV 643
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 140/285 (49%), Gaps = 29/285 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G G G+ +R PV A+A G H+L G V+A G ND GQ
Sbjct: 370 WGSNFSGERGEGTTNNRASPVQVQGLGGG--VAVAAGFNHSLAARSDGSVWAWGSNDSGQ 427
Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N S P+++ GL VV ++ G+ HS A+ DG ++ WG N+ GQLG G
Sbjct: 428 LGDGTTRN---STSPVQVQGLSG-VVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTT 483
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+++P V+ LSG+ A G S+AV G V +WG+ G+LG G S+ L
Sbjct: 484 TNRLVP----VQVLSGVVA--VAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRL-- 535
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P ++ L GV AAG HS + +G V+ +G + ++ +G + R
Sbjct: 536 -------VPVQVQGLSGVAA--VAAGSFHSLAVHSDGSVWAWGSNSSGEL--GDGTTSNR 584
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V GG+H+ V+ S G ++TWGSN G LG G
Sbjct: 585 LVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDG 629
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 21/257 (8%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
+ S LA G +++L L G V+ATG ND GQLG +S P+++ GL VV +
Sbjct: 44 DAPSRARLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHS-APVQVPGLSG-VVAV 101
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS A+ DG ++ WG NS+GQLG G ++ P+ +V+ LSG+ + A G
Sbjct: 102 AAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPV--RVQGLSGVVS--VAAGSSY 157
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+AV G V +WG+ SG+LG G S+ L P + L GV V + AAG
Sbjct: 158 SLAVRSDGTVWAWGSNFSGQLGDGTTSNRL---------VPVQVPGLSGV-VSV-AAGSS 206
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSG 306
HS + +G V+ +G + ++ +G R P + L V G H+ + S
Sbjct: 207 HSLAVLSDGSVWAWGANSSGQL--GDGTKINRLVPVQVPGLSGVVAVAAGAAHSLAVRSD 264
Query: 307 GELYTWGSNENGCLGIG 323
G ++TWG+N G LG G
Sbjct: 265 GTVWTWGANSFGQLGDG 281
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV + A G H+L L G V+A G N GQ
Sbjct: 270 WGANSFGQLGDGTKSDRLVPVRVQGLSG--VVASDVGSYHSLALRSDGSVWAWGHNSSGQ 327
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S+ P+++ GL + ++ G HS A+ DG ++ WG N +G+ G G
Sbjct: 328 LGDDSSTSRSV-PVQVRGLSGGMA-VTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNN 385
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ L G A GF S+A G V +WG+ SG+LG G
Sbjct: 386 RASPV--QVQGLGGGVA--VAAGFNHSLAARSDGSVWAWGSNDSGQLGDGT--------- 432
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + +P ++ L GV AAGF HS + +G V+ +G A ++ EG R
Sbjct: 433 TRNSTSPVQVQGLSGVVA--VAAGFDHSLALRSDGSVWAWGSNAYGQL--GEGTTTNRLV 488
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L V G H+ + S G ++TWGSN G LG G
Sbjct: 489 PVQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDG 529
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 135/283 (47%), Gaps = 25/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ +R PV + A+A G H+L + G V+ G N +GQ
Sbjct: 470 WGSNAYGQLGEGTTTNRLVPVQV----LSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQ 525
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL V ++ G HS A+ DG ++ WG NS+G+LG G +
Sbjct: 526 LG-DGTTSNRLVPVQVQGLSG-VAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSN 583
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P +V LSG AA GF S+ V G V +WG+ G LG G
Sbjct: 584 RLVP--GRVPGLSG-GVAVAAGGF-HSLVVRSDGTVWTWGSNSFGELGDGT--------- 630
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+TS P ++ L GV AG HS + +G V+ +G + ++ +G RR
Sbjct: 631 TTSRSVPVQVQGLSGVVA--VDAGNSHSLAVRSDGTVWTWGYNSYGQL--GDGTTTRRSV 686
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + G H V+ S G ++ WG N G LG G
Sbjct: 687 PVQVPGLSGVVAMATGALHPLVVRSDGTVWAWGYNSFGQLGNG 729
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 133/281 (47%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + ++A G +++L + G V+A G N GQ
Sbjct: 120 WGSNSDGQLGDGTTTMRLTPVRVQGLSG--VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQ 177
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL VV ++ G HS A+ DG ++ WG NS+GQLG G K
Sbjct: 178 LG-DGTTSNRLVPVQVPGLSG-VVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKIN 235
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+ +V LSG+ A S+AV G V +WGA G+LG G +S L
Sbjct: 236 RLVPV--QVPGLSGVVAVAAG--AAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRL---- 287
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L GV + G HS + +G V+ +G + ++ P
Sbjct: 288 -----VPVRVQGLSGVVA--SDVGSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVPV 340
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L V G H+ + S G ++ WGSN +G G G
Sbjct: 341 QVRGLSGGMAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEG 381
>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1
[Bifidobacterium asteroides PRL2011]
gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1
[Bifidobacterium asteroides PRL2011]
Length = 1160
Score = 124 bits (310), Expect = 7e-26, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 144/304 (47%), Gaps = 29/304 (9%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVV----CSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
A WG +YG+LG G+L R +PV+ A + ++ G +L + G VYA
Sbjct: 688 AYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAVGSDGYVYAW 747
Query: 96 GLNDFGQLGISENIGYSLEPLRI-------SGLKKEVVQISTGYHHSSAITVDGELYMWG 148
G N+ GQLG + GYS PLR+ SGL VQ+S GY+HS A+ G ++ WG
Sbjct: 748 GNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLT--AVQVSAGYYHSLALDARGNIWAWG 805
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSG 207
N G+LG G IP + +G T Q + GF + A+ G SWG G
Sbjct: 806 FNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFG 865
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG+G ++I + +Y PR + ++V +AG HS ID G + +G +
Sbjct: 866 QLGNG--NNIDSAIPVPVQY-PRDAGTVRAIQV---SAGADHSLIIDTKGNTWAWGWNQL 919
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--------EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+ L + A + + Y E +V GGYH+ + G + WG N++G
Sbjct: 920 GE-LGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGNDSGE 978
Query: 320 LGIG 323
LGIG
Sbjct: 979 LGIG 982
Score = 111 bits (278), Expect = 4e-22, Method: Composition-based stats.
Identities = 84/301 (27%), Positives = 142/301 (47%), Gaps = 30/301 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA------LACGGAHTLFLTETGCVYATG 96
WGN + G+LG GS + V + + ++ ++ G H+L L G ++A G
Sbjct: 747 WGNNESGQLGNGS-SGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLALDARGNIWAWG 805
Query: 97 LNDFGQLGISENIGYSLEPL----RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
N FG+LG NI ++ L R +G +Q+S G+HH++AI G + WG N
Sbjct: 806 FNQFGELGNGNNINSAIPTLAQYPRDAG-TVTAIQVSGGFHHTAAIDTKGNTWSWGWNWF 864
Query: 153 GQLGLGKKAAKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G IP+P + +G + Q + G + S+ + G +WG G LG+
Sbjct: 865 GQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQLGELGN 924
Query: 212 GQESSILGFLRSTSEYTPRLIKELEG----VKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
G S + + P ++K E ++++A G+ HS ID+NG + +G
Sbjct: 925 GSSS-------ADANPVPGMVKYPENAGTVTAIQVSAGGY-HSLAIDKNGNAWAWGGNDS 976
Query: 268 DKMLFQEGNHARRPSLI-----SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ + + P+L+ + + +V GGYH+ + G+ + WG N+ G LG
Sbjct: 977 GELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQFGQLGN 1036
Query: 323 G 323
G
Sbjct: 1037 G 1037
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 30/259 (11%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---SGLKKEV--VQISTGYHHSSA 137
TL + G YA G N++GQLG + +P+ + +G + VQ+S G S A
Sbjct: 679 TLAVGSDGNAYAWGRNNYGQLG-DGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLA 737
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQAALGFEQSVAVT 193
+ DG +Y WG N +GQLG G +P +V + SG+ Q + G+ S+A+
Sbjct: 738 VGSDGYVYAWGNNESGQLGNGSSGGYST-VPLRVIDPNDPRSGLTAVQVSAGYYHSLALD 796
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + +WG G LG+G ++I + + ++Y PR + ++V + GF H+A I
Sbjct: 797 ARGNIWAWGFNQFGELGNG--NNINSAIPTLAQY-PRDAGTVTAIQV---SGGFHHTAAI 850
Query: 254 DENGRVYIFG---------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
D G + +G +D + + R + + +V G H+ ++
Sbjct: 851 DTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAI----QVSAGADHSLIID 906
Query: 305 SGGELYTWGSNENGCLGIG 323
+ G + WG N+ G LG G
Sbjct: 907 TKGNTWAWGWNQLGELGNG 925
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLND 99
WG +G+LG G+ PV V + +++A+ + G H+L + G +A G N
Sbjct: 859 WGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTKGNTWAWGWNQ 918
Query: 100 FGQLGISENIGYSLEPLRISGLKK--------EVVQISTGYHHSSAITVDGELYMWGKNS 151
G+LG N S + + G+ K +Q+S G +HS AI +G + WG N
Sbjct: 919 LGELG---NGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGND 975
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+LG+G + IP + +G + T Q + G S+ + GK +WG G+LG
Sbjct: 976 SGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQFGQLG 1035
Query: 211 HGQESS 216
+G S+
Sbjct: 1036 NGTISN 1041
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/137 (33%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA-------LACGGAHTLFLTETGCVYAT 95
WG G LG GS + PV K+ A ++ GG H+L + + G +A
Sbjct: 914 WGWNQLGELGNGSSSADANPV--PGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAW 971
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKE----VVQISTGYHHSSAITVDGELYMWGKNS 151
G ND G+LGI S P + K VQ+S G +HS I +G+ + WG N
Sbjct: 972 GGNDSGELGIG-TTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQ 1030
Query: 152 NGQLGLGKKAAKVIPIP 168
GQLG G + IP P
Sbjct: 1031 FGQLGNGTISNSSIPTP 1047
>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 2290
Score = 124 bits (310), Expect = 7e-26, Method: Composition-based stats.
Identities = 84/276 (30%), Positives = 128/276 (46%), Gaps = 44/276 (15%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLN---------------------DFGQLGISEN 108
K +K ++CG HTL +T+ G ++ G+ GQLG +EN
Sbjct: 267 KDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLG-NEN 325
Query: 109 IGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
EP + K++ +Q++ G HS A+T +G+++ WGKN+ GQLG G + ++ P
Sbjct: 326 FVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPT 385
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+E + G + S ++ ++ +WG G RLGHG +T E
Sbjct: 386 MIIIE----VMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGV---------TTDEL 432
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
P+ + LE V V + G H+ I G VY +GD K+ QE N + L
Sbjct: 433 YPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKS--------L 484
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V GG H+ LT G LY+WGS++ G LGIG
Sbjct: 485 HLPTRVSAGGLHSMALTDQGILYSWGSSKGGVLGIG 520
Score = 84.0 bits (206), Expect = 9e-14, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 27/217 (12%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG + + + P + K +ACG +H++ LT+ G ++ G N GQLG
Sbjct: 319 GQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLG---- 374
Query: 109 IGYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
G+ + L+ + + EV+ I +G HS+ I+ + ELY WG +LG G ++
Sbjct: 375 QGHRNDQLKPTMIIIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDEL-- 432
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV L ++ + G ++A+T G V +WG G SG+LG QE+ + S
Sbjct: 433 YPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGV-QEN-------NKSL 484
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P + +AG LHS + + G +Y +G
Sbjct: 485 HLPTRV-----------SAGGLHSMALTDQGILYSWG 510
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 12/140 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG Y RLG G P E + ++CG HTL +T G VYA G G+
Sbjct: 415 WGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGK 474
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--KK 160
LG+ EN P R+S G HS A+T G LY WG + G LG+G +
Sbjct: 475 LGVQENNKSLHLPTRVSA----------GGLHSMALTDQGILYSWGSSKGGVLGIGFQRD 524
Query: 161 AAKVIPIPTKVECLSGIFTK 180
+P K+ ++ I +K
Sbjct: 525 NKDCYSLPQKIRTVAKIQSK 544
Score = 60.8 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G + +P + + ++ G H+ F+++ +Y G + +
Sbjct: 365 WGKNTRGQLGQGHRNDQLKPTMI--IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFR 422
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG L P ++ L+ V +S G H+ AIT +G +Y WG +G+LG+ ++
Sbjct: 423 LGHGVTTD-ELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGV-QEN 480
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K + +PT+V + G S+A+T G + SWG+ G LG +GF
Sbjct: 481 NKSLHLPTRV-----------SAGGLHSMALTDQGILYSWGSSKGGVLG-------IGFQ 522
Query: 222 RSTSE-YT-PRLIKELEGVKVK 241
R + Y+ P+ I+ + ++ K
Sbjct: 523 RDNKDCYSLPQKIRTVAKIQSK 544
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
P I K +++ +S Y H+ AI+ G Y WG N QLGLG K IP K++
Sbjct: 781 PFLIPYFKNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLG-YMCKYNHIPQKIQ-- 837
Query: 175 SGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ TK+ + S +T G++ ++G SG LGH +++ + SE P++
Sbjct: 838 GALETKRIIMSTCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYV-----VSE--PKM 890
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
I ++ + + +A+ A ++ ++Y +G+ ++ Q N+
Sbjct: 891 INDIPPM-IFLASGPQGMMAITEQKRQIYAWGNNLYGQLGIQITNN 935
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQI 128
K+ + ++C H + ++ G Y+ G N + QLG+ Y+ P +I G L+ + + +
Sbjct: 788 KNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIM 847
Query: 129 STGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
ST SA+ D GE++ +G + +G LG +K V+ P + + + A G +
Sbjct: 848 STCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMINDIPPMIF--LASGPQ 905
Query: 188 QSVAVTGGGK-VLSWGAGGSGRLG 210
+A+T + + +WG G+LG
Sbjct: 906 GMMAITEQKRQIYAWGNNLYGQLG 929
Score = 45.4 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ Y +LGLG + ++ + + A E + C + LT+ G ++ G +D
Sbjct: 813 WGSNKYYQLGLGYM-CKYNHIPQKIQGALETKRIIMSTCSDRFSALLTDKGEIWTFGTSD 871
Query: 100 FGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGL 157
G LG E Y + EP I+ + ++ +++G AIT ++Y WG N GQLG+
Sbjct: 872 SGVLGHDEKNYYVVSEPKMINDIPP-MIFLASGPQGMMAITEQKRQIYAWGNNLYGQLGI 930
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ ++A++ G SWG+ +LG LG++ + ++ LE ++ ++
Sbjct: 798 YTHAIAISHKGVAYSWGSNKYYQLG-------LGYMCKYNHIPQKIQGALETKRIIMSTC 850
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGGYHTCVL 303
SA + + G ++ FG + E N+ P +I+ +P + G +
Sbjct: 851 SDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMINDIPPMIFLASGPQGMMAI 910
Query: 304 TSGG-ELYTWGSNENGCLGI 322
T ++Y WG+N G LGI
Sbjct: 911 TEQKRQIYAWGNNLYGQLGI 930
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG L+ +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 59 GDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQL 118
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E +L P +I L +++Q+S G +HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 119 GIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELP 178
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L + G
Sbjct: 179 SQAS-PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------AFFGSNV 231
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y PR + L+ + V + G H+A + +NG+V+ FGD + ++ P
Sbjct: 232 PVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQ 291
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ + ++ CG YHT + + G++ ++G
Sbjct: 292 LMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 131/255 (51%), Gaps = 16/255 (6%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
L+ A G H+L L G V++ G N GQLG + +P I L+ V+ +S G
Sbjct: 36 LRQAASGERHSLLLLSDGAVHSCGDNSRGQLG-RRGLQREEQPKPIQALETLRVELVSCG 94
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ ++ IP K++ L+GI Q + G S+A
Sbjct: 95 KEHSLAVCYKGRVFAWGAGSEGQLGIGE-FKEINLIPQKIKTLTGIKIIQVSCGNYHSLA 153
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G+E S+ +P+ ++ L+G+ + AAG HS
Sbjct: 154 LSEDGQVFSWGSNSHGQLGLGKELP--------SQASPQRVRSLDGIPLAQVAAGGAHSF 205
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSG 306
+ +G + +G ++ F N + +P +S L + CG HT VLT
Sbjct: 206 ALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQN 265
Query: 307 GELYTWGSNENGCLG 321
G+++T+G N G LG
Sbjct: 266 GKVFTFGDNSCGQLG 280
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 16/231 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E P + ++CG H+L L+E G V++
Sbjct: 106 RVFA--WGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSW 163
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + + P R+ L + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 164 GSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 223
Query: 155 LG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L G P V L + + G E + +T GKV ++G G+LGH
Sbjct: 224 LAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHS- 282
Query: 214 ESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
T+E T P+L++ +EG+ +I + A + G+V FG
Sbjct: 283 ---------PTAEKTGPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + DG ++ G NS GQ LG++ + P ++ L + + +
Sbjct: 35 ELRQAASGERHSLLLLSDGAVHSCGDNSRGQ--LGRRGLQREEQPKPIQALETLRVELVS 92
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I P+ IK L G+K+
Sbjct: 93 CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEI--------NLIPQKIKTLTGIKIIQV 144
Query: 244 AAGFLHSACIDENGRVYIFGDRA-----VDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
+ G HS + E+G+V+ +G + + K L + + R SL +P + +V GG
Sbjct: 145 SCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSL-DGIPLA-QVAAGGA 202
Query: 299 HTCVLTSGGELYTWGSNENGCLGI 322
H+ L+ G + WGSN G L
Sbjct: 203 HSFALSLSGTSFGWGSNNAGQLAF 226
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +G+LGLG L S+ P + + L +A GGAH+ L+ +G + G N+ G
Sbjct: 163 WGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 222
Query: 102 QLGI--SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL S S +P +S LK VV IS G+ H++ +T +G+++ +G NS GQLG
Sbjct: 223 QLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHS 282
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
A K P +E + G+ ++ + V G+V+S+G G S +
Sbjct: 283 PTAEKT--GPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRGPSCK 330
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+QAA G S+ + G V S G G+LG G R E P+ I+ LE ++
Sbjct: 37 RQAASGERHSLLLLSDGAVHSCGDNSRGQLGRR------GLQR---EEQPKPIQALETLR 87
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVV 294
V++ + G HS + GRV+ +G + ++ F+E N P I L + +V
Sbjct: 88 VELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLI--PQKIKTLTGIKIIQVS 145
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG YH+ L+ G++++WGSN +G LG+G
Sbjct: 146 CGNYHSLALSEDGQVFSWGSNSHGQLGLG 174
>gi|452818724|gb|EME25942.1| regulator of chromosome condensation [Galdieria sulphuraria]
Length = 383
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 146/278 (52%), Gaps = 18/278 (6%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLE 114
S +RP + ++ + S++ +ACG TLF+T+ G VY++G+ +GQLG + E G +L
Sbjct: 19 SVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITL- 77
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
I + ++V+ + G HS +T G LY G G+LGLG ++ + P VE L
Sbjct: 78 ---IDSIPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLG-TISRRMETPQLVESL 133
Query: 175 SGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL------RSTSE 226
+ K + A G S+A++ GKV S+G+ G LGHG+ + FL E
Sbjct: 134 AREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGI-FLWEPFHSHRNME 192
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
+PRLI+ LE +++ + G H+ I++ G + +G + +P +
Sbjct: 193 TSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFH 252
Query: 287 LPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
LP +++V GG HT LT GG+++ WG N GCLG+G
Sbjct: 253 LPGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVG 290
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL---KKEVVQ-IS 129
K + GGAHTL LT+ G V+A G+N FG LG+ E EP + L KE +Q I+
Sbjct: 258 KQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPIQWIA 317
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G+ S A+ +G +Y WG+ G LG G++ K P+ + E + + GF +
Sbjct: 318 AGWFFSMAVDSEGYVYSWGRGHAGALGTGEEEDKWEPVAIQNEQGEPLQVDRIYAGFNYA 377
Query: 190 VAV 192
+AV
Sbjct: 378 IAV 380
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 44 GNGDYGRLGLGSLESRWRP---VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
G G G LGLG++ R V A E+ + +A G ++ L+E+G VY+ G +
Sbjct: 108 GYGKRGELGLGTISRRMETPQLVESLAREEEKIIKVAAGHGFSIALSESGKVYSFGSAND 167
Query: 101 GQLGISENIG--YSLEPLR-----------ISGLKKEVVQ-ISTGYHHSSAITVDGELYM 146
G LG E G + EP I L+KE ++ IS G H+ AI +G +
Sbjct: 168 GHLGHGEVPGGIFLWEPFHSHRNMETSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFG 227
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG + P + L G + KQ G ++ +T GG+V +WG
Sbjct: 228 WGCGRYHCFATDNEVN--WEQPQALFHLPGPW-KQIVSGGAHTLGLTKGGQVWAWGVNHF 284
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKEL---EGVKVKIAAAGFLHSACIDENGRVYIFG 263
G LG G++ TS PR++++L ++ AAG+ S +D G VY +G
Sbjct: 285 GCLGVGEQ--------RTSPGEPRIVEKLLQQAKEPIQWIAAGWFFSMAVDSEGYVYSWG 336
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 18/201 (8%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A EK ++ ++CG H + + G + G + + + +P + L
Sbjct: 195 PRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWE-QPQALFHL 253
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECL---SGI 177
QI +G H+ +T G+++ WG N G LG+G++ + P P VE L +
Sbjct: 254 PGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQ--RTSPGEPRIVEKLLQQAKE 311
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ A G+ S+AV G V SWG G +G LG G+E ++ P I+ +G
Sbjct: 312 PIQWIAAGWFFSMAVDSEGYVYSWGRGHAGALGTGEEE---------DKWEPVAIQNEQG 362
Query: 238 --VKVKIAAAGFLHSACIDEN 256
++V AGF ++ + +
Sbjct: 363 EPLQVDRIYAGFNYAIAVKDE 383
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G YG+LG SR + S+ E ++ ++CG H++ + + G +Y+ G GQL
Sbjct: 59 GQNPYGQLGRKGNNSRIEQI--SSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQL 116
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + + P RI+GL ++++QIS G HS A+ DG ++ WG+N GQLGLG +
Sbjct: 117 GTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQII 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P V+ L GI Q G Q+ A++ G V +WG +G+LG ++
Sbjct: 177 NQA-TPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAK------ 229
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P + L + V + G H+A ++++G VY FGD ++ Q GN P
Sbjct: 230 -KGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQ 288
Query: 283 LISKLPYSE---EVVCGGYHT 300
I + YS +V CG YHT
Sbjct: 289 KIEE--YSRQVSQVACGRYHT 307
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 148/291 (50%), Gaps = 29/291 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+L + E + + +K S++ ++ G H+L+L + G + + G N +
Sbjct: 4 WGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQNPY 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N +E +IS L+ + +V +S G +HS A+ +G +Y WG S GQLG GK
Sbjct: 64 GQLGRKGN-NSRIE--QISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGK 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++K P ++ L Q + G SVA+ G+V SWG G+LG G S I+
Sbjct: 121 FSSKNF-TPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLG--SQII- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
++ TP+L+K L+G+ + AG + + +G V+ +G ++ F+ N A+
Sbjct: 177 -----NQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFK--NDAK 229
Query: 280 RPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + PY+ + + CG HT VL G +YT+G + G LG
Sbjct: 230 KGTF---KPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLG 277
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LGLGS + ++ P + + + L + GG+ T L+ +G V+A G N+ G
Sbjct: 161 WGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAG 220
Query: 102 QLGISENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + + +P + L+ V IS G H++ + DG +Y +G ++ GQLG +
Sbjct: 221 QLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLG--Q 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-----E 214
++ +P K+E S ++ A + + V +++S+G G + G+ + E
Sbjct: 279 QSGNQTSVPQKIEEYSRQVSQVACGRYHTLLYVFTCNRIVSFGKGSQRQQGNDESSDQAE 338
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+S L S P +L+ V VK AG
Sbjct: 339 ASQLPSAFDISSLVPA--NDLKDVNVKWIFAG 368
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 20/186 (10%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG N GQL + ++ +V+ ++ ++G + S+ + G +LS G
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60
Query: 204 GGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LG G S I I LE + + G HS + + G +Y +
Sbjct: 61 NPYGQLGRKGNNSRI------------EQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSW 108
Query: 263 GDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
GD + ++ F N P I+ L + ++ CG +H+ L G +++WG N+
Sbjct: 109 GDGSEGQLGTGKFSSKNFT--PKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKC 166
Query: 318 GCLGIG 323
G LG+G
Sbjct: 167 GQLGLG 172
>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
Length = 1413
Score = 124 bits (310), Expect = 8e-26, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 157/324 (48%), Gaps = 27/324 (8%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
A +K++LK D+ L G + + + F ++G+ ++G+LGLG+ + +P A
Sbjct: 27 APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
+K ACG HTL T G +YA G N+ GQLG+ + N S + + +
Sbjct: 85 LRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G + S+A+T DG LYM G NS GQ+GLGK++ + P V G + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G + ++G SG+LG E + + P+ + ++ V++A G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253
Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
H+ + EN VY FG ++ +F+ +R P ++ + CG H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T ++T G LYT+G +G LG+G
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLG 331
Score = 113 bits (283), Expect = 1e-22, Method: Composition-based stats.
Identities = 91/265 (34%), Positives = 134/265 (50%), Gaps = 17/265 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G + G+LGLG R + F K +K LA G + LT+ G +Y G N GQ
Sbjct: 113 GGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQ 172
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G+ + +L P +S + K V +S GY+HS+ +TVDG LY +G+ +G+LGL +
Sbjct: 173 IGLGKE-SNALTPQEVS-VGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKL 230
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P +V + Q A G +VA+T +V S+G G G+LGHG F+
Sbjct: 231 ANHKVPQQVTDIPDRVV-QVACGGGHTVALTEN-EVYSFGLGQFGQLGHGT------FIF 282
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--R 280
+ PR+++ +VK AA G H+A I +NG +Y FGD K+ E N +
Sbjct: 283 ESR--LPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFK 340
Query: 281 PSLISK-LPYS-EEVVCGGYHTCVL 303
P+L + L Y V CGG H VL
Sbjct: 341 PTLCPRFLDYHVHSVTCGGCHMLVL 365
Score = 45.8 bits (107), Expect = 0.024, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G G +G+LG G+ ESR P V F K +K ACG HT +T+ G +Y G
Sbjct: 267 FGLGQFGQLGHGTFIFESRL-PRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRH 325
Query: 101 GQLGISE 107
G+LG+ E
Sbjct: 326 GKLGLGE 332
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
+G+G +G+LGLG + ++++P +C F + + ++ CGG H L L +
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 115/231 (49%), Gaps = 21/231 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G ++ P A EK A GG H+L LTE VYA G N FGQ
Sbjct: 76 WGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQ 135
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + YS P +S L++ V I+ GY HS A+ +LY WG+N GQLGLG
Sbjct: 136 LGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYR 195
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----GGG-----KVLSWGAGGSGRLGHG 212
+ P+P + +Q + G++ ++A G G KV +WG G G+LGH
Sbjct: 196 SS--PVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHD 253
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ S P++++ L ++ AAG SA IDE ++Y +G
Sbjct: 254 E---------LYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWG 295
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAAL 184
V + G H+ A+T +G +Y WG +NG LG G ++++P + + + A
Sbjct: 1 VGAACGKLHTVALTEEGRVYSWG-CANGALGHGNSKSQLLPKALDRPLIYSMPSITTIAC 59
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++AV G + +WG G+LGHG + PR ++ LE AA
Sbjct: 60 GEFHTLAVGQDGTLWTWGRNQYGQLGHGD---------CKTHKLPRRVEALEKKICIKAA 110
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
AG HS + E +VY FG ++ L + ++ P ++S+L S + CG H+
Sbjct: 111 AGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSM 170
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
L +LY+WG N+ G LG+G
Sbjct: 171 ALLKSEQLYSWGRNDCGQLGLG 192
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 31/262 (11%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKEVVQISTGY 132
ACG HT+ LTE G VY+ G + G LG S+ + +L+ I + + I+ G
Sbjct: 4 ACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLPKALDRPLIYSMP-SITTIACGE 61
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A+ DG L+ WG+N GQLG G K +P +VE L +AA G + S+ +
Sbjct: 62 FHTLAVGQDGTLWTWGRNQYGQLGHGD--CKTHKLPRRVEALEKKICIKAAAGGQHSLVL 119
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHS 250
T KV ++G+ G+LG L S +Y+ P ++ L V G+ HS
Sbjct: 120 TEANKVYAFGSNVFGQLG----------LESKVKYSAAPDIVSRLRRSGVCHITCGYSHS 169
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSG-- 306
+ ++ ++Y +G ++ + P ++ S +++ CG H S
Sbjct: 170 MALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYA 229
Query: 307 -------GELYTWGSNENGCLG 321
++YTWG E G LG
Sbjct: 230 GPGVPPLEKVYTWGRGEEGQLG 251
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG L SR P V ++A+A GG + + E +Y G + GQ
Sbjct: 242 WGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREGQ 301
Query: 103 LGISENI 109
LG ++I
Sbjct: 302 LGHGDDI 308
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 141/296 (47%), Gaps = 31/296 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVV----CSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG G G+LGLG E PV A ++ +ACG HTL L + G V + G N
Sbjct: 5 WGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASCGDN 64
Query: 99 DFGQLGISENIGY---SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG G S P I L+ ++VV +S G HS A+ G +Y WG + GQ
Sbjct: 65 SRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQ 124
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G+ ++ IP + LS Q A G + S+A+T G++ SWG G+LG G++
Sbjct: 125 LGTGELGDRL--IPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKD 182
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S S+ +P+ + L+G+ + AAG HS + +G VY +G ++
Sbjct: 183 IS--------SQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQL---- 230
Query: 275 GNHARRPSLISKLPYS---------EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
G +P PYS V CG HT VLT G +YT+G + G LG
Sbjct: 231 GLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLG 286
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 116/224 (51%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G L R P +A K+ + +ACG H++ LT G +++ G N GQ
Sbjct: 117 WGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQ 176
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-K 160
LG+ ++I P ++S L + Q++ G HS A+++ G +Y WG+N+ QLGL + K
Sbjct: 177 LGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQAK 236
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ I P + L + + G E + +T G V ++G +G+LG SS
Sbjct: 237 PKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNSSSS---- 292
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC-IDENGRVYIFG 263
++ P+ ++ ++G V + A G H+ I +G++ FG
Sbjct: 293 ----PKFGPQKVEWIDG-PVSLLACGSYHTLVRISTSGQLLSFG 331
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 5/170 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG + S+ P SA + L +A GGAH+ L+ +G VY G N+
Sbjct: 169 WGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAH 228
Query: 102 QLGISENIGYS--LEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+S+ +P I+ L+ +V +S G H++ +T +G +Y +G +S GQLG
Sbjct: 229 QLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRN 288
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
++ P KVE + G + A + V ++ G++LS+G G R
Sbjct: 289 SSSSPKFG-PQKVEWIDGPVSLLACGSYHTLVRISTSGQLLSFGRGPLQR 337
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 108/241 (44%), Gaps = 20/241 (8%)
Query: 92 VYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
+Y G GQLG+ + G S P + + VV ++ G H+ + DG +
Sbjct: 2 LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61
Query: 148 GKNSNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
G NS GQLG L K P ++ L + G E S+AV G+V SWGAG
Sbjct: 62 GDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGT 121
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G+ LG P+ I L KV A G HS + +GR++ +G
Sbjct: 122 FGQLGTGE----LG-----DRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQN 172
Query: 266 AVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ L ++ + P +S L P ++ V GG H+ L+ G +Y WG N LG
Sbjct: 173 IHGQLGLGKDISSQASPQQVSALDGIPLAQ-VAAGGAHSFALSLSGVVYGWGRNNAHQLG 231
Query: 322 I 322
+
Sbjct: 232 L 232
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 83/184 (45%), Gaps = 9/184 (4%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
LY WG+ S GQLGLGK P+P + + A G ++ + G V S
Sbjct: 2 LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LG S + Y P LI+ LE KV + G HS + GRVY
Sbjct: 62 GDNSRGQLGRRLPSG-----QEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYS 116
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G ++ E P I+ L + +V CG H+ LT+ G +++WG N +G
Sbjct: 117 WGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQ 176
Query: 320 LGIG 323
LG+G
Sbjct: 177 LGLG 180
>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
Length = 792
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 138/284 (48%), Gaps = 20/284 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + A+A G HT T +G V G N GQ
Sbjct: 397 WGRNKDGQLGDGTTTTRSTPVAVSGLVS-GVTAIAAGDDHTCARTSSGGVMCWGDNWSGQ 455
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A+ G ++ WG+NS+GQLG G
Sbjct: 456 LGDGTTTDRS-TPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTD 514
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ +SG+ ++ A+ G + A+T G V+ WGA SG+LG G
Sbjct: 515 RGTPVA-----VSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGT------- 562
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T+ TP + L + I AAG LH+ + +G V+ +G + ++
Sbjct: 563 --TTARSTPVAVSGLPSGVMAI-AAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARST 619
Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S LP + G +HTC LTS G ++ WG+N +G LG G
Sbjct: 620 PVAVSGLPSGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDG 663
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 123/260 (47%), Gaps = 16/260 (6%)
Query: 66 SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
S+F + A+A GGAHT LT +G V G N FGQLG S P+ +SGL
Sbjct: 61 SSFSPLQGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRS-TPVAVSGLTSG 119
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V I+ GY H+ A+ G + WG N +GQLG G + P+ V L+ T AA
Sbjct: 120 VTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPV--AVSGLASGVTAIAA- 176
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + + A T G V+ WG SG+LG G +T TP + L G V A
Sbjct: 177 GDDHTCARTSSGGVMCWGDNWSGQLGDGT---------TTDRSTPVAVSGL-GSGVTAIA 226
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVL 303
AG H+ + +G V+ +GD ++ P +S L + GG+HTC
Sbjct: 227 AGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGGFHTCAR 286
Query: 304 TSGGELYTWGSNENGCLGIG 323
TS G + WG+N +G LG G
Sbjct: 287 TSSGGVMCWGANWSGQLGDG 306
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 127/282 (45%), Gaps = 16/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV S + A+A GG HT LT +G V G N GQ
Sbjct: 499 WGRNSSGQLGDGTTTDRGTPVAVSGLPSE-VTAIASGGVHTCALTSSGGVMCWGANWSGQ 557
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V+ I+ G H+ A+T G ++ WG NS+GQLG G A
Sbjct: 558 LGDGTTTARS-TPVAVSGLPSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTA 616
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA F + A+T G V WGA SG+LG G
Sbjct: 617 RSTPV--AVSGLPSGVTAIAAGSF-HTCALTSSGGVWCWGANWSGQLGDGSY-------- 665
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T TP + L V AAG H+ +G V+ + ++ + P
Sbjct: 666 -TDSSTPVAVSGLP-SGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPV 723
Query: 283 LISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + G HTC TS G + WG+N +G LG G
Sbjct: 724 AVSGLVSGVTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDG 765
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 127/283 (44%), Gaps = 18/283 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV S + A+A GG+HT L +G V+ G N GQ
Sbjct: 193 WGDNWSGQLGDGTTTDRSTPVAVSGLGS-GVTAIAAGGSHTCALMSSGGVWCWGDNWSGQ 251
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A T G + WG N +GQLG G A
Sbjct: 252 LGDGTTTDRS-TPVAVSGLASGVTAIAAGGFHTCARTSSGGVMCWGANWSGQLGDGTTTA 310
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L+ T AA G + A+T G V WG G+LG G
Sbjct: 311 RSTPV--AVSGLASGVTAIAA-GDSHTCALTSSGGVWCWGYNFFGQLGDGT--------- 358
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-P 281
+T TP + L G V AAG H+ + +G V +G R D L R P
Sbjct: 359 TTDRSTPVAVSGL-GSGVTAIAAGDFHTCALMSSGGVRCWG-RNKDGQLGDGTTTTRSTP 416
Query: 282 SLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + G HTC TS G + WG N +G LG G
Sbjct: 417 VAVSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDG 459
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 121/282 (42%), Gaps = 16/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV S + A+A G AHT L +G V G N GQ
Sbjct: 91 WGRNGFGQLGDGTTTDRSTPVAVSGLTS-GVTAIAAGYAHTCALMSSGGVMCWGDNWSGQ 149
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A T G + WG N +GQLG G
Sbjct: 150 LGDGTTTDRS-TPVAVSGLASGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTD 208
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L T AA G + A+ G V WG SG+LG G
Sbjct: 209 RSTPV--AVSGLGSGVTAIAA-GGSHTCALMSSGGVWCWGDNWSGQLGDGT--------- 256
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L IAA GF H+ +G V +G ++ P
Sbjct: 257 TTDRSTPVAVSGLASGVTAIAAGGF-HTCARTSSGGVMCWGANWSGQLGDGTTTARSTPV 315
Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + G HTC LTS G ++ WG N G LG G
Sbjct: 316 AVSGLASGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDG 357
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + A+A G HT LT +G V+ G N GQ
Sbjct: 601 WGANSSGQLGDGTTTARSTPVAVSGLPS-GVTAIAAGSFHTCALTSSGGVWCWGANWSGQ 659
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL V I+ G H+ A T G ++ W N GQLG G
Sbjct: 660 LGDGSYTDSS-TPVAVSGLPSGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTD 718
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
P+ +SG+ + A+ G + A T G V+ WGA SG+LG G+
Sbjct: 719 SSTPVA-----VSGLVSGVTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDGR 766
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 149/306 (48%), Gaps = 35/306 (11%)
Query: 33 STLQRRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
ST+ R +W G + G+LG G+ + E + + +L HTL +T+ G
Sbjct: 46 STILRSDGTVWTTGRNNVGQLGNGTEKDS--SYFGKVDELYDVVSLDSDMDHTLAITKHG 103
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
V+ G N G+ I+E P++I+GLK ++VQ+STG HS A+ G ++ WG+N
Sbjct: 104 TVWGWGYNSKGE--ITEGGKNIARPVQINGLK-DIVQVSTGLVHSLALDQSGAVWSWGEN 160
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG G IPTKVE LS I +A G E S+A++ GKV +WG G+LG
Sbjct: 161 IYGQLGNGTNQDS--SIPTKVEFLSNIVAIEA--GAEHSLALSNDGKVWAWGRNEFGQLG 216
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA---- 266
+G+ + PRL+K LE +++ A G HS +D +G ++ +G +
Sbjct: 217 NGE---------TEKSNIPRLVKNLE--NIEMIAGGDNHSLALDHDGAIWAWGYNSNGQI 265
Query: 267 ---------VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
D L ++ N L ++V G H+ LT GE+Y WG NE
Sbjct: 266 GDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNEY 325
Query: 318 GCLGIG 323
G LG G
Sbjct: 326 GQLGNG 331
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 132/273 (48%), Gaps = 26/273 (9%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
RPV + + + ++ G H+L L ++G V++ G N +GQLG N S+ P ++
Sbjct: 125 RPVQINGLK--DIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSI-PTKVEF 181
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
L +V I G HS A++ DG+++ WG+N GQLG G+ IP V+ L I +
Sbjct: 182 LSN-IVAIEAGAEHSLALSNDGKVWAWGRNEFGQLGNGETEKS--NIPRLVKNLENI--E 236
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES--SILGFLRSTSEYT-PRLIKELEG 237
A G S+A+ G + +WG +G++G G + G LR T P + L G
Sbjct: 237 MIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYG 296
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------ 291
KVK +AG HS + ENG VY +G ++ GN + + S K+P
Sbjct: 297 -KVKQVSAGIKHSTALTENGEVYAWGWNEYGQL----GNGSMKDS---KVPLRNNVGRSI 348
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ G YH+ + G +Y WG G LG G
Sbjct: 349 IDIETGSYHSFAVDESGVIYAWGDATYGQLGDG 381
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 30/261 (11%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGY--SLEPLRISGLKKE 124
E S+ ++ GG + L G V+ TG N+ GQLG ++ Y ++ L +
Sbjct: 32 ESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELY------D 85
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VV + + H+ AIT G ++ WG NS G++ G K I P ++ L I Q +
Sbjct: 86 VVSLDSDMDHTLAITKHGTVWGWGYNSKGEITEG---GKNIARPVQINGLKDIV--QVST 140
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G S+A+ G V SWG G+LG+G Q+SSI P ++ L + V I
Sbjct: 141 GLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSI-----------PTKVEFLSNI-VAI 188
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
A G HS + +G+V+ +G ++ E + P L+ L E + G H+
Sbjct: 189 EA-GAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEMIAGGDNHSLA 247
Query: 303 LTSGGELYTWGSNENGCLGIG 323
L G ++ WG N NG +G G
Sbjct: 248 LDHDGAIWAWGYNSNGQIGDG 268
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LG G E P + E +++ +A G H+L L G ++A G N GQ
Sbjct: 207 WGRNEFGQLGNGETEKSNIPRLVKNLE--NIEMIAGGDNHSLALDHDGAIWAWGYNSNGQ 264
Query: 103 LGISENIGYS-----------LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+G + Y EP++++GL +V Q+S G HS+A+T +GE+Y WG N
Sbjct: 265 IGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNE 324
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG G +P+ V G G S AV G + +WG G+LG
Sbjct: 325 YGQLGNGSMKDSKVPLRNNV----GRSIIDIETGSYHSFAVDESGVIYAWGDATYGQLGD 380
Query: 212 G 212
G
Sbjct: 381 G 381
>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
terrestris]
Length = 539
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 28/289 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
GN YG LG G S P A S+K A G G H L LTE G VY+ G ND+ +
Sbjct: 52 GNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE 111
Query: 103 LGISENIGYSLEPLRI-SGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + L P I S L E VV I+ G HHS A+T GE+Y WG N +GQ+G G
Sbjct: 112 LG-NRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTI 170
Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ V PIP + L+G + G SVAVT G+V SWG G G+LG G
Sbjct: 171 LSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIG------- 223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TS+ P+ + + ++ G++H+ + + G +Y++G + ++ ++
Sbjct: 224 --NCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNTDSNVW 281
Query: 280 RPSLISKLPYSE-----EVVCGGYH--TCVLTSGGELYTWGSNENGCLG 321
P +KL E ++ YH + ++ G ++ WG CLG
Sbjct: 282 IP---TKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWGQ----CLG 323
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 117/248 (47%), Gaps = 18/248 (7%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITV 140
TL +T+ VY G N +G LG + ++ P +I L K V + G H A+T
Sbjct: 39 TLIVTKDDMVYGIGNNTYGCLGTGDTHS-TIYPKKIEALCGKSVKTFAYGKGPHVLALTE 97
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
+G++Y WG N +LG + P IP+ L+ F A G S+A+T G+V
Sbjct: 98 EGKVYSWGYNDYCELGNRSTNEGLTPTLIPS---ALNNEFVVDIACGGHHSLALTNKGEV 154
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENG 257
+WG SG++G G + ST + P+L+ L G KV + G S + +NG
Sbjct: 155 YAWGHNVSGQVG-------CGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNG 207
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G V ++ P ++ E+VVCG HT L+ G+LY WG+N
Sbjct: 208 EVYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGAN 267
Query: 316 ENGCLGIG 323
G LG+
Sbjct: 268 SYGQLGLN 275
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ G++G G++ S +P+ + + ++CG + ++ +T+ G VY+ G N
Sbjct: 157 WGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNG 216
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLGI N EP +++ K V++ + GY H+ A++ +G+LY+WG NS GQLGL
Sbjct: 217 VGQLGIG-NCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLN 275
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ IP +V + I + S+A++ G ++ WG
Sbjct: 276 TDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWG 319
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LEP IS ++ +V + + +T D +Y G N+ G LG G + + P K+E
Sbjct: 18 LEPKFISNVRMAIVY-GKAANETLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYP--KKIE 74
Query: 173 CLSGIFTKQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE-YTPR 230
L G K A G +A+T GKV SWG LG+ RST+E TP
Sbjct: 75 ALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGN----------RSTNEGLTPT 124
Query: 231 LIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLIS 285
LI L V A G HS + G VY +G ++ + P L+
Sbjct: 125 LIPSALNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQ--PIPKLLH 182
Query: 286 KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++VV CG + +T GE+Y+WG N G LGIG
Sbjct: 183 IVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIG 223
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG+G+ S+ P + F K ++ + CG HTL L++ G +Y G N +GQ
Sbjct: 212 WGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQ 271
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKK 160
LG++ + + L++ + + + ++ YHH S A++ ++MWG+ LG+
Sbjct: 272 LGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWGQ------CLGQS 325
Query: 161 AAKVIPIPTKVECL 174
+P T ++CL
Sbjct: 326 IK--VPTLTPLKCL 337
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 148/310 (47%), Gaps = 18/310 (5%)
Query: 19 KLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
+LG+ C + S + +WG GD GRLG+ + ++++P V ++ ++ +
Sbjct: 85 RLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASA 142
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
GG H + LTE G VY G FG LG L L K +V +S G H++A+
Sbjct: 143 GGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAV 202
Query: 139 TVDGELYMWGKNS-NGQLGLGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
T GELY WG++ G+LG G + PTKV+ L GF ++A+T
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFF-TMALTK 261
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ SWG + LGHG ++ + P+++ LE V + A G H+A +
Sbjct: 262 SGQLWSWGGNANHELGHGTRAN---------NWKPKVVAALEDVTLVQVACGGFHAAALT 312
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
++G+V +G ++ + + P+++ + + CG T +T G+LYTW
Sbjct: 313 QDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTW 372
Query: 313 GSNENGCLGI 322
G N + LGI
Sbjct: 373 GKNRDYQLGI 382
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 37/305 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA------------------CGGAHTL 84
WG G +G++G GS ++ PV+ S + + +A CG H++
Sbjct: 40 WGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSV 99
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
E V+ G D G+LGI +P ++ K V S G H+ A+T G +
Sbjct: 100 LFAEQD-VFVWGKGDGGRLGIDTEFN-QYKPY-VNPRIKRVQMASAGGLHNIALTEVGNV 156
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
Y WG + G LG G +++P L G + + + G + AVT G++ +W
Sbjct: 157 YTWGYGAFGALGHGSYERELLP-----RLLEGPWKDRIVHVSAGGSHTAAVTESGELYTW 211
Query: 202 GAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G G GRLGHG + + P ++ L+ V + + G + + ++G+++
Sbjct: 212 GRDEGEGRLGHGNPD----IMDEGALSRPTKVQALD-VPIALVYCGGFFTMALTKSGQLW 266
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+G A ++ + +P +++ L +V CGG+H LT G++ TWG NG
Sbjct: 267 SWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNG 326
Query: 319 CLGIG 323
LG G
Sbjct: 327 QLGHG 331
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG LG G+ + W+P V +A E +L +ACGG H LT+ G V G GQ
Sbjct: 268 WGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQ 327
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GKK 160
LG + EP + + K I+ G ++AIT +G+LY WGKN + QLG+ G K
Sbjct: 328 LG-HGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLK 386
Query: 161 AAKVIPI 167
++ P+
Sbjct: 387 DEQLDPV 393
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI---PTKVECLSGIFTKQAALGFEQ--- 188
SS + E++ WG+ ++GQ+G G + + +P+ K+ +G+ Q + +
Sbjct: 28 SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87
Query: 189 SVAVTGG---------GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+V VT G V WG G GRLG E ++Y P + ++ +
Sbjct: 88 NVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTE---------FNQYKPYVNPRIK--R 136
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVV-- 294
V++A+AG LH+ + E G VY +G A + G+ + L+ +L P+ + +V
Sbjct: 137 VQMASAGGLHNIALTEVGNVYTWGYGAFGAL----GHGSYERELLPRLLEGPWKDRIVHV 192
Query: 295 -CGGYHTCVLTSGGELYTWGSNE-NGCLGIG 323
GG HT +T GELYTWG +E G LG G
Sbjct: 193 SAGGSHTAAVTESGELYTWGRDEGEGRLGHG 223
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G+LE+ P + A + +ACG A T +TE G +Y G N Q
Sbjct: 320 WGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQ 379
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
LGI L+P+ +VQ H + + V G
Sbjct: 380 LGIPGLKDEQLDPV--------LVQFPQALHEKTPVEVLG 411
>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
Length = 926
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
LI + ++ C YHT V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 124/251 (49%), Gaps = 18/251 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L VY+ G N +GQLG + + P I L V +S G HS
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S GQLG+G+ ++ +PTK++ L+GI Q + G S+A++
Sbjct: 87 VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG HS +
Sbjct: 146 GHVFSWGRNSEGQLGLGK--------NSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197
Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
G + +G ++ GN + +P I L + CG HT VLT G++
Sbjct: 198 TGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256
Query: 310 YTWGSNENGCL 320
+T+G N +G L
Sbjct: 257 FTFGGNSSGQL 267
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ + +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
+ G HS + E+G V+ +G + ++ G ++R ++ K+ E +V GG
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
H+ L+ G + WGSN +G L +
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALS 215
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
SGI QAA G S+ + +V S G G+LG R S P I+
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR---------RDQSTERPEPIQA 70
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE 291
L + V + + G HS + G+V+ +G + ++ F+E + P+ I L +
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM--PTKIKALAGIK 128
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG YH+ L+ G +++WG N G LG+G
Sbjct: 129 IIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG 162
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + V CG H+ + G+++ WG+ G LGIG
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIG 109
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 145/290 (50%), Gaps = 25/290 (8%)
Query: 43 WGNGDYGRLGLGSLESRWR-----PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG Y LG + S R P VC S+K +ACGG H++FL E G VY G+
Sbjct: 4 WG---YWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 98 NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG E G +P +I L + +V ++ G HS A++ G+L+ WG S+GQLG
Sbjct: 61 NSKGQLG-HEREGN--KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG 117
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L + +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 118 L-MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S+ +P+ ++ LEG+ + AAG HS + +G V+ +G ++ +
Sbjct: 177 --------SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228
Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + KL +++VV CG HT VLT G ++T+G+ G LG G
Sbjct: 229 DRESPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHG 277
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG G
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG ++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
Length = 1003
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
LI + ++ C YHT V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 124/251 (49%), Gaps = 18/251 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L VY+ G N +GQLG + + P I L V +S G HS
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S GQLG+G+ ++ +PTK++ L+GI Q + G S+A++
Sbjct: 87 VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG HS +
Sbjct: 146 GHVFSWGRNSEGQLGLGK--------NSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197
Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
G + +G ++ GN + +P I L + CG HT VLT G++
Sbjct: 198 TGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256
Query: 310 YTWGSNENGCL 320
+T+G N +G L
Sbjct: 257 FTFGGNSSGQL 267
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ + +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
+ G HS + E+G V+ +G + ++ G ++R ++ K+ E +V GG
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
H+ L+ G + WGSN +G L +
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALS 215
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
SGI QAA G S+ + +V S G G+LG R S P I+
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR---------RDQSTERPEPIQA 70
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE 291
L + V + + G HS + G+V+ +G + ++ F+E + P+ I L +
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM--PTKIKALAGIK 128
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG YH+ L+ G +++WG N G LG+G
Sbjct: 129 IIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG 162
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + V CG H+ + G+++ WG+ G LGIG
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIG 109
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 133/280 (47%), Gaps = 24/280 (8%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+G Y +LG S+E S+ P F + +++CG ++ LTE G VY G
Sbjct: 547 WGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSV 606
Query: 101 GQLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
I+ L P ++ L+ E+V IS G++HS+A+ +GEL WG +GQLG
Sbjct: 607 KNPPIATLGNGTFDDQLLPQKVESLQ-EIVVISIGFYHSAAVKSNGELLTWGCGEDGQLG 665
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + PIP V+ ++ + Q G + ++ +T GKV +WG G+LG G
Sbjct: 666 HGDVFNQ--PIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGD--- 720
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ TP L+ L+ + A G H+A + N V +FG+ A N
Sbjct: 721 ------TQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAA----MGSAN 770
Query: 277 HARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
P ++ K+ E + CG Y T LT G++YTWGS
Sbjct: 771 IISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGS 810
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 20/263 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G + ++ P V + H + + CG HT+ LT+ G V+ G +++GQ
Sbjct: 656 WGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQ 715
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + + P+ ++ L K ++QI+ G H++ +T + E+ ++G G +
Sbjct: 716 LGLGDT-QKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGN------GAAMGS 768
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A +I IP V L + ++ + G + A+T G V +WG+G LGHG
Sbjct: 769 ANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSG--QELGHGH-------- 818
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TSE P+L++ L ++ + G H A + ++G++Y G ++ G+ R
Sbjct: 819 -GTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHAAGDQNRPK 877
Query: 282 SLISKLPYS-EEVVCGGYHTCVL 303
+ S L + + CG H L
Sbjct: 878 KIDSLLKTTFMSISCGENHNAAL 900
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 8/182 (4%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L WG S +LG P P ++ + + G S A+T G V WG
Sbjct: 544 LMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGR 603
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G + LG + P+ ++ L+ ++ + + GF HSA + NG + +G
Sbjct: 604 GSV----KNPPIATLGNGTFDDQLLPQKVESLQ--EIVVISIGFYHSAAVKSNGELLTWG 657
Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ + + P ++ + + +V CG HT LT G+++TWG++E G LG
Sbjct: 658 CGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLG 717
Query: 322 IG 323
+G
Sbjct: 718 LG 719
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P L+ + + +++L + + +++WG+G +LG + S+
Sbjct: 514 PGSSPPLNAVNSAESSLSMRSATQLDTSRGLMTWGSGSYCKLGFKS-------VEKDSQP 566
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-DKMLFQEGNHARRPSLIS- 285
TP + + + G +SA + ENG VY++G +V + + GN L+
Sbjct: 567 TPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQ 626
Query: 286 KLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
K+ +E+V G YH+ + S GEL TWG E+G LG G
Sbjct: 627 KVESLQEIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHG 667
>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
Length = 596
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 134/267 (50%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 4 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQL 63
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 64 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 122
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 123 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 176
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 177 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 236
Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
LI + ++ C YHT V T+G
Sbjct: 237 LIEGIGGRVSQIECASYHTIAYVYTTG 263
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 116/235 (49%), Gaps = 18/235 (7%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
Y+ G N +GQLG + P I L V +S G HS A+ G+++ WG S
Sbjct: 1 YSCGDNSWGQLGQRRDQSTE-RPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGS 59
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
GQLG+G+ ++ +PTK++ L+GI Q + G S+A++ G V SWG G+LG
Sbjct: 60 EGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL 118
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G+ S S+ P+ +K LEG+ + AAG HS + G + +G ++
Sbjct: 119 GK--------NSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLA 170
Query: 272 FQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCL 320
GN + +P I L + CG HT VLT G+++T+G N +G L
Sbjct: 171 L-SGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 224
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 55 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 114
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 115 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 174
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 175 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 234
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 235 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 269
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y G NS GQLG + + P P ++ L+ + + G E SVAV GKV WGAG
Sbjct: 1 YSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAG 58
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G+ I + P IK L G+K+ + G HS + E+G V+ +G
Sbjct: 59 SEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGR 110
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+ ++ G ++R ++ K+ E +V GG H+ L+ G + WGSN +G
Sbjct: 111 NSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQ 168
Query: 320 LGI 322
L +
Sbjct: 169 LAL 171
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
LG R S P I+ L + V + + G HS + G+V+ +G + ++ E
Sbjct: 11 LGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKE 70
Query: 278 -ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P+ I L + +V CG YH+ L+ G +++WG N G LG+G
Sbjct: 71 ISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG 119
>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
Length = 611
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 110/212 (51%), Gaps = 16/212 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G DYG+LG+G P F +H + A+ACG +T+ G V A G ND GQL
Sbjct: 197 GCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQL 256
Query: 104 GISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G+ L P R++ L + VV Q+S GYHH++ +T DG +Y +G+N GQLGLG K
Sbjct: 257 GLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKL 316
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P P VE LS + Q A G ++A++ GKV + GR HGQ LG
Sbjct: 317 HMARPTP--VESLSRMRITQVACGCYHTLALSDDGKVFPF-----GRNNHGQ----LGLE 365
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
S +P+LI L K AAGF HS C+
Sbjct: 366 TSMDCLSPQLISTLRN---KPVAAGFYHSVCL 394
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 19/286 (6%)
Query: 44 GNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLN 98
G D G+ +G+ E R+ P + S H+++ + G+ H L G +Y G N
Sbjct: 91 GYNDSGQCAIGTTERVPSLRFSPGLSS---HHTVRLFSGNGSEHLAALCANGFLYTVGFN 147
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+ + L K VV ++ Y H++ + +G+L+ G N GQLG+G
Sbjct: 148 MRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMG 207
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ ++P P + A G +VA G V+++G G+LG + S +
Sbjct: 208 DHSGHLVPRPVDYFFRHPVLA--VACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPV 265
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L T RL L+ V + G+ H+A + E+G VY FG ++ H
Sbjct: 266 --LLPT-----RLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHM 318
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
RP+ + L +V CG YHT L+ G+++ +G N +G LG+
Sbjct: 319 ARPTPVESLSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLGL 364
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 20/284 (7%)
Query: 29 RWISSTLQRRFAALWGNGDY--------GRLGLGSLESRWRPVVCSAFEKHSLKALACGG 80
R S AAL NG G+LGLG+ + + + +AC
Sbjct: 122 RLFSGNGSEHLAALCANGFLYTVGFNMRGQLGLGTATTVTEATLVEELAGKRVVDVACSY 181
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
HT + + G ++A G ND+GQLG+ ++ G+ + + V+ ++ G H++ A
Sbjct: 182 FHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLR 241
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DG + +GKN +GQLGL + + V+ +PT++ L Q + G+ + VT G V
Sbjct: 242 DGGVVAFGKNDHGQLGLDRVSEPVL-LPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVY 300
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G+LG G + L R P ++ L +++ A G H+ + ++G+V
Sbjct: 301 TFGRNDYGQLGLGHK---LHMAR------PTPVESLSRMRITQVACGCYHTLALSDDGKV 351
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
+ FG ++ + P LIS L ++ V G YH+ L
Sbjct: 352 FPFGRNNHGQLGLETSMDCLSPQLISTL-RNKPVAAGFYHSVCL 394
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 126/303 (41%), Gaps = 46/303 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLND 99
+G YG L LG R P + K +ACG T L E G V+ G ND
Sbjct: 35 FGQNTYGELALGDTNDRSTPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTCGYND 94
Query: 100 FGQ--LGISENIGYSLEPLRIS-GLKKE-VVQISTGY--HHSSAITVDGELYMWGKNSNG 153
GQ +G +E + LR S GL V++ +G H +A+ +G LY G N G
Sbjct: 95 SGQCAIGTTERV----PSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMRG 150
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLGLG A + T VE L+G A + + V G + + G G+LG G
Sbjct: 151 QLGLG--TATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGD 208
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------D 264
S L PR + V A G ++ +G V FG D
Sbjct: 209 HSGHL---------VPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQLGLD 259
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCL 320
R + +L P+ ++ P VV CG +HT ++T G +YT+G N+ G L
Sbjct: 260 RVSEPVLL--------PTRLAP-PLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQL 310
Query: 321 GIG 323
G+G
Sbjct: 311 GLG 313
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLS 200
L+ +G+N+ G+L LG + PT+V+ TK A G EQ+ + G V +
Sbjct: 32 LFSFGQNTYGELALGDTNDRS--TPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFT 89
Query: 201 WGAGGSGRLGHGQESSILGFLRS---TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
G SG+ G + S +S +T RL + G H A + NG
Sbjct: 90 CGYNDSGQCAIGTTERVPSLRFSPGLSSHHTVRL----------FSGNGSEHLAALCANG 139
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
+Y G ++ +L+ +L +V C +HT ++ G+L+ G N
Sbjct: 140 FLYTVGFNMRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCN 199
Query: 316 ENGCLGIG 323
+ G LG+G
Sbjct: 200 DYGQLGMG 207
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 71 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 127
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 128 LADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTI 186
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 187 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 238
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 239 LAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 297
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 298 EEHTAVLTKSGGVFTFGAGSCGQLG 322
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 129/267 (48%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A ++ +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 121 KPEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 180
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 181 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 239
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V +WG +G+LG E +P +K L K
Sbjct: 240 AQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEE---------DRESPCHVKLLRTQK 290
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 291 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 350
Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIG 323
HT + S G +Y +G G LG G
Sbjct: 351 QHTLAFVPSSGLIYAFGCGARGQLGTG 377
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 155 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 214
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 215 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDE 274
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH +
Sbjct: 275 EDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN----- 327
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 328 ----DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 367
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+A G+N+ G
Sbjct: 208 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAG 267
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 268 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 326
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 327 NDEV--NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 382
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 261 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 320
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 321 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 379
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 380 CNVKCPSPVK 389
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 14/173 (8%)
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
Q G+ ++ P +S K+ A G SV + G+V + G G+LGH +
Sbjct: 58 QPGISTNLRGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHER 117
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
E + P I L + A G HS + + G+++ +G + ++ L
Sbjct: 118 EGN-----------KPEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLM 166
Query: 273 QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 167 TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 219
>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
Length = 646
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+L G + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKL--GLPNQLLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 1001
Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP V G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+L G S +L RS P+ + + +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKL--GLPSELLMNHRS-----PQRVLGIPERVIQVACGGG- 253
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330
Score = 41.6 bits (96), Expect = 0.48, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHML 362
>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 1035
Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats.
Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP V G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV----GKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT G++ ++G +G+LG + I + +P+ + + ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285
Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
+A G H+ + E VY FG + LF+ P +I ++ + +
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG HT ++T G +YT+G +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F K +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHML 400
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE--------FPSQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P K+ L + G E + +T G V ++GAG G+LGH +
Sbjct: 228 KDRESPCHVKL--LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN----- 280
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 281 ----DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH +E + P I L + A G HS + + G+++ +G
Sbjct: 61 NTKGQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG 109
Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+ ++ L + P LI KL +V CG +H L + G+ +TWG N +G L
Sbjct: 110 AGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169
Query: 321 GIG 323
G+G
Sbjct: 170 GLG 172
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 144/286 (50%), Gaps = 18/286 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ ++G+LG +S P A E ++ + CG AHT+ +++ G V+A G N +GQ+
Sbjct: 60 GSNEFGQLG--QEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQI 117
Query: 104 GISENIGYSLE--PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+ + ++ P + GL K VVQI+ G +HS A+T+ G L+ WG NS+GQLG+GK
Sbjct: 118 GLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKT 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P V L+G+ + G S A++ G + WG G+LG
Sbjct: 178 HSSMSE-PAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHD------- 229
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P L+K L V + G H+A + +G V+ FG ++ +H
Sbjct: 230 --TTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYT 287
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
P + +L S ++ CG HT L S G +YT+G +G LG+G
Sbjct: 288 PRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLG 333
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 145/287 (50%), Gaps = 20/287 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLND 99
WG G+LG+G E + P + E S ++ ++CG HT FL + G VY G N+
Sbjct: 4 WGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNE 63
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FGQLG ++ P + ++ + +++ G H+ A++ G ++ WG NS GQ+GLG
Sbjct: 64 FGQLGQEKS---HTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLG 120
Query: 159 KKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
K KV IP ++ L+ + Q A G S+A+T G + WG SG+LG G+ S
Sbjct: 121 SKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHS- 179
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S SE P L L GV + +AG HS + +G ++ +G ++ +
Sbjct: 180 -----SMSEPAPVL--SLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTD 232
Query: 278 ARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+ V CG HT VLTS G ++T+G +G LG
Sbjct: 233 RPLPTLLKSL-RSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLG 278
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG+G S P + ++ GGAH+ L+ +G ++ G N++G
Sbjct: 164 WGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYG 223
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ + L L S + V +S G H++ +T DG ++ +G ++GQLG
Sbjct: 224 QLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNH 283
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+ P KV L G Q A G ++A V G+V ++G GG G+LG G
Sbjct: 284 HEY--TPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLG 333
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 21/188 (11%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWG 202
++ WGK S GQLG+G+ + I P +E L ++ + G+ + + G V + G
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ G+LG + S P + +E + G H+ + + G V+ +
Sbjct: 61 SNEFGQLG-----------QEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAW 109
Query: 263 GDRAVDKMLFQEGNHARR-----PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
GD + ++ G+ + P ++ L ++ CG H+ LT G L+ WG N
Sbjct: 110 GDNSYGQIGL--GSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDN 167
Query: 316 ENGCLGIG 323
+G LGIG
Sbjct: 168 SSGQLGIG 175
>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Short=mRpgr; Flags: Precursor
Length = 1001
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP V G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E + + +P+ + + +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNELLM-------NHRSPQRVLGIPERVIQVACGGG- 253
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330
Score = 41.6 bits (96), Expect = 0.48, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHML 362
>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
Length = 1001
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP V G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E + + +P+ + + +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNELLM-------NHRSPQRVLGIPERVIQVACGGG- 253
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330
Score = 41.6 bits (96), Expect = 0.48, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHML 362
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+ +G+LG ++ + +P A E + ++CG H+L + G V+A G GQ
Sbjct: 47 YGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQ 106
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI E +L P +I L +++Q+S G+HHS A++ DG L+ WG NS+GQLGLGK+
Sbjct: 107 LGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKEC 166
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P +V+ L GI Q A G S A++ G WG+ G+L +++ + +
Sbjct: 167 PSQAS-PQRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKN--VPVV 223
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+S+ P + LE + V + G+ H+A + + G+V+ FG + ++ + P
Sbjct: 224 QSSK---PCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGP 280
Query: 282 SLISKLP-YSEEVVCGGYHTC--VLTSG 306
L+ + ++ CG YHT V T+G
Sbjct: 281 QLVEGIDGLVSQIDCGSYHTLAYVYTTG 308
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 133/259 (51%), Gaps = 23/259 (8%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
L+ A G H+L L G +++ G N GQLG ++ +P RI L+ V +S G
Sbjct: 25 LRQAASGERHSLLLLSNGELHSYGDNSHGQLG-RRDVQRQEQPKRIPALETLRVDLVSCG 83
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ ++ IP K++ L+ I Q + G S+A
Sbjct: 84 KEHSLAVCYKGRVFAWGAGSEGQLGIGE-FNEINLIPRKIKTLTDIKIIQVSCGHHHSLA 142
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G++ +WG+ G+LG G+E S+ +P+ ++ L+G+ + AAG HS
Sbjct: 143 LSEDGRLFTWGSNSHGQLGLGKECP--------SQASPQRVQFLDGIPLTQVAAGGAHSF 194
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCV 302
+ +G + +G + ++ ++ N P + S P S + + CG HT V
Sbjct: 195 ALSLSGASFGWGSNSEGQLALRKKN---VPVVQSSKPCSVDALENLGVVYISCGYEHTAV 251
Query: 303 LTSGGELYTWGSNENGCLG 321
LT G+++T+G N G LG
Sbjct: 252 LTQTGKVFTFGGNSYGQLG 270
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + +GEL+ +G NS+GQ LG++ + P ++ L + +
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSYGDNSHGQ--LGRRDVQRQEQPKRIPALETLRVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ + I PR IK L +K+
Sbjct: 82 CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEI--------NLIPRKIKTLTDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + E+GR++ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLT-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLSGASFGWGSNSEGQLAL 215
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+QAA G S+ + G++ S+G G+LG + P+ I LE ++
Sbjct: 26 RQAASGERHSLLLLSNGELHSYGDNSHGQLGRRD---------VQRQEQPKRIPALETLR 76
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSE--EVVCG 296
V + + G HS + GRV+ +G + ++ E N P I L + +V CG
Sbjct: 77 VDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCG 136
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
+H+ L+ G L+TWGSN +G LG+G
Sbjct: 137 HHHSLALSEDGRLFTWGSNSHGQLGLG 163
>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
musculus]
Length = 1039
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP V G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E + + +P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNELLM-------NHRSPQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 41.6 bits (96), Expect = 0.48, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHML 400
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE--------FPSQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P K+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDRESPCHVKL--LRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD-------- 277
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 278 -SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH +E + P I L + A G HS + + G+++ +G
Sbjct: 61 NTKGQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG 109
Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+ ++ L + P LI KL +V CG +H L + G+ +TWG N +G L
Sbjct: 110 AGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169
Query: 321 GIG 323
G+G
Sbjct: 170 GLG 172
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 136/274 (49%), Gaps = 14/274 (5%)
Query: 53 LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGY 111
LG ++++PV SA E +K +ACG HTL +++ G V G ND GQ G++ +I
Sbjct: 69 LGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIEN 128
Query: 112 SLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
P + L + V++ G HS A+T DG L+ WG N+ GQLG+G PT+
Sbjct: 129 KPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTE 188
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+ L G+ + A G S A+T G V WG G+LG G + ++ P
Sbjct: 189 LTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKE---------NKAYPT 239
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
L++ + VK A G H+A + +G V++FG + ++ + P + L S
Sbjct: 240 LLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGS 299
Query: 291 E--EVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
+ +V CG +HT VL S G LY +G +G LG
Sbjct: 300 DITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLG 333
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+ GL G +E++ RP + + + CG H++ LT G +++ G N +
Sbjct: 111 WGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTY 170
Query: 101 GQLGISENI-GYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLGI + Y+ P ++ L+ +V+++ G HS A+T+ G ++ WGKN GQLGLG
Sbjct: 171 GQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLG 230
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K K PT + + K A G + + +T G V +G G G+LGHG
Sbjct: 231 NKENKA--YPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS----- 283
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYIFG 263
+ +E PR + +L G + G H+ ++ GR+Y FG
Sbjct: 284 ----NYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFG 325
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+ GL G +E++ RP + + + CG H++ LT G +++ G N +
Sbjct: 451 WGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTY 510
Query: 101 GQLGISENI-GYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLGI + Y+ P ++ L+ +V+++ G HS A+T+ G ++ WGKN GQLGLG
Sbjct: 511 GQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLG 570
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K K PT + + K A G + + +T G V +G G G+LGHG
Sbjct: 571 NKENK--SYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS----- 623
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYIFG 263
+ +E PR + +L G + G H+ ++ GR+Y FG
Sbjct: 624 ----NYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFG 665
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 14/254 (5%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKK-EVVQIST 130
+K +ACG HTL +++ V G ND GQ G++ +I P + L + V++
Sbjct: 429 IKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCC 488
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A+T DG L+ WG N+ GQLG+G PT++ L G+ + A G S
Sbjct: 489 GSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSF 548
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G V WG G+LG G + ++ P L++ + VK A G H+
Sbjct: 549 ALTISGSVFGWGKNDVGQLGLGNKE---------NKSYPTLLRNMRSQMVKHIACGQDHT 599
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLT-SGG 307
A + +G V++FG + ++ + P + L S+ +V CG +HT VL S G
Sbjct: 600 AMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKG 659
Query: 308 ELYTWGSNENGCLG 321
LY +G +G LG
Sbjct: 660 RLYAFGQGIHGQLG 673
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLGI G + + + ++ L + VQ IS G HH+ + DG LYM G NS GQLG
Sbjct: 12 GQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQ 71
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ K P +V L + K A G + ++AV+ G+VL WG G+ G
Sbjct: 72 DRNQYK----PVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCG------- 120
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
L ++ PR++K L + G LHS + +GR++ +GD ++
Sbjct: 121 LATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVT 180
Query: 276 NHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N+ RP+ ++ L P V CGG+H+ LT G ++ WG N+ G LG+G
Sbjct: 181 NYTDRPTELTSLRGVPLV-RVACGGFHSFALTISGSVFGWGKNDVGQLGLG 230
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 136/287 (47%), Gaps = 16/287 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ G+LG+G + V + +++++CG HT + + G +Y G N
Sbjct: 6 WGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGANS 65
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG N +P+++S L+ V++ ++ G H+ A++ G++ WG+N GQ GL
Sbjct: 66 KGQLGQDRN---QYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLA 122
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P P ++ L+ + G S+A+T G++ SWG G+LG +
Sbjct: 123 TGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLG-------I 175
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
G L + P + L GV + A G HS + +G V+ +G V ++ +
Sbjct: 176 GTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENK 235
Query: 279 RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+L+ + + + CG HT +LT+ G ++ +G G LG G
Sbjct: 236 AYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHG 282
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 138/304 (45%), Gaps = 29/304 (9%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ YG+LG+G+L + + RP ++ L +ACGG H+ LT +G V+ G ND
Sbjct: 165 WGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDV 224
Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG+ EN Y P + ++ ++V+ I+ G H++ +T DG ++++G+ S GQLG
Sbjct: 225 GQLGLGNKENKAY---PTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGH 281
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESS 216
G +V P KV L G Q G ++ + G G++ ++G G G+LG + S
Sbjct: 282 GSNYNEV--NPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARS 339
Query: 217 ILGFLRSTSEYTPRLIKEL----EGVKVKIAAAGFLH-----SACIDENGRVYIFGDRAV 267
R + P E +G V+ AG H + D+ +F D +
Sbjct: 340 CSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDIST 399
Query: 268 DKMLFQEGNHARRPSLISKLPYS--------EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
++ FQ + V CG HT ++ ++ WG N+ G
Sbjct: 400 -RIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQ 458
Query: 320 LGIG 323
G+
Sbjct: 459 CGLA 462
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 11/194 (5%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ YG+LG+G+L + + RP ++ L +ACGG H+ LT +G V+ G ND
Sbjct: 505 WGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDV 564
Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG+ EN Y P + ++ ++V+ I+ G H++ +T DG ++++G+ S GQLG
Sbjct: 565 GQLGLGNKENKSY---PTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGH 621
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESS 216
G +V P KV L G Q G ++ + G G++ ++G G G+LG + S
Sbjct: 622 GSNYNEV--NPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARS 679
Query: 217 ILGFLRSTSEYTPR 230
R + P
Sbjct: 680 CSNPQRVPGPWVPH 693
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 129/310 (41%), Gaps = 37/310 (11%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT-ETGCVYATGLNDF 100
L+G G G+LG GS + P + + CG HTL L G +YA G
Sbjct: 270 LFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIH 329
Query: 101 GQLGISENIGYSLEPLRISGL-------------KKEVVQ-ISTGYHH--SSAITV--DG 142
GQLG E S P R+ G K VV+ I G HH S+A D
Sbjct: 330 GQLGQDEARSCS-NPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDI 388
Query: 143 ELYMWGKNSNG----QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
++ + ++ + QL L + K A G + ++AV+ +V
Sbjct: 389 QIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQV 448
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
L WG G+ G L ++ PR+++ L + G LHS + +GR
Sbjct: 449 LGWGRNDRGQCG-------LATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGR 501
Query: 259 VYIFGDRAVDKMLFQE--GNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWG 313
++ +GD ++ N+ RP+ ++ L P V CGG+H+ LT G ++ WG
Sbjct: 502 LFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVR-VACGGFHSFALTISGSVFGWG 560
Query: 314 SNENGCLGIG 323
N+ G LG+G
Sbjct: 561 KNDVGQLGLG 570
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ ++ G H+ A++ ++ WG+N GQ GL + P P + L+ +
Sbjct: 429 IKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCC 488
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S+A+T G++ SWG G+LG +G L + P + L GV + A
Sbjct: 489 GSLHSMALTRDGRLFSWGDNTYGQLG-------IGTLVTNYTDRPTELTSLRGVPLVRVA 541
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCV 302
G HS + +G V+ +G V ++ + P+L+ + + + CG HT +
Sbjct: 542 CGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAM 601
Query: 303 LTSGGELYTWGSNENGCLGIG 323
LT+ G ++ +G G LG G
Sbjct: 602 LTADGGVFLFGQGSEGQLGHG 622
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 145 YMWGKNSNGQLGLGKKAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ WG + GQLG+G + + +V LSG + + G + V G + GA
Sbjct: 4 FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG + ++Y P + LE V +K A G H+ + + G+V +G
Sbjct: 64 NSKGQLGQDR-----------NQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWG 112
Query: 264 --DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
DR + + + RP ++ L + +V CG H+ LT G L++WG N G
Sbjct: 113 RNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQ 172
Query: 320 LGIG 323
LGIG
Sbjct: 173 LGIG 176
>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Nomascus leucogenys]
Length = 704
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 161/321 (50%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTRNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG H L TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWGKNS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAAVTEDGRLFMWGKNSEGQIGL--KNVPNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+L G S +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKL--GLPSQLLGNHR-----TPQLVSEIPEKVIQVARGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+ G +YT+G++ +G LG+G
Sbjct: 310 IRDIGLMYTFGNSRHGKLGLG 330
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+GN +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGNSRHGKLGLGLENFTNHFIPTLCSDFLRFIVKLVACGGCHMVVF 364
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 137/267 (51%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG ++ +P A + ++CG H++ + G V+A G GQL
Sbjct: 46 GDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E +L P+RI L +++Q+S G++HS A++ DG+++ WGKNS GQLGLG +++
Sbjct: 106 GIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSS 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV L GI Q A G S A++ G WG+ G+L E+S + +
Sbjct: 166 SQAS-PQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISK 224
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 225 ------PHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQ 278
Query: 283 LISKLP-YSEEVVCGGYHTC--VLTSG 306
L+ + ++ CG YHT V T+G
Sbjct: 279 LVEGIKGQVSKIECGSYHTIAYVYTTG 305
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 24/254 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHS 135
A G H+L L VY+ G N GQLG E EP++ G ++ +S G HS
Sbjct: 27 ASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALG-TLDIDLVSCGKEHS 85
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG S GQLG+G+ ++ +P +++ L GI Q + G S+A++
Sbjct: 86 IAVCHKGRVFAWGAGSEGQLGIGE-FKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSED 144
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V SWG G+LG G +SS S+ +P+ + LEG+ + AAG HS +
Sbjct: 145 GQVFSWGKNSQGQLGLGMQSS--------SQASPQKVTSLEGIPLAQVAAGGSHSFALSL 196
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSG 306
G Y +G +V ++ N + ISK P+S + + CG HT VLT
Sbjct: 197 TGTSYGWGSNSVGQLALSGENSTVQ---ISK-PHSIDALKNLGVIYISCGYEHTAVLTKD 252
Query: 307 GELYTWGSNENGCL 320
G+++T+G N +G L
Sbjct: 253 GQVFTFGDNSSGQL 266
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
S +P R++G E++Q ++G HS + + +Y G NS GQLG ++ P P
Sbjct: 9 SRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEP-- 66
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
++ L + + G E S+AV G+V +WGAG G+LG G+ I P
Sbjct: 67 IQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEI--------NLMPM 118
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL-- 287
IK L G+K+ + G HS + E+G+V+ +G + ++ L + + P ++ L
Sbjct: 119 RIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEG 178
Query: 288 -PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ V GG H+ L+ G Y WGSN G L +
Sbjct: 179 IPLAQ-VAAGGSHSFALSLTGTSYGWGSNSVGQLALS 214
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E P+ + ++CG H+L L+E G V++
Sbjct: 93 RVFA--WGAGSEGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSW 150
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ P +++ L+ + Q++ G HS A+++ G Y WG NS GQ
Sbjct: 151 GKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQ 210
Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L G+ + I P ++ L + + G+E + +T G+V ++G SG+L +
Sbjct: 211 LALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNP 270
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P+L++ ++G KI + A + G+V G
Sbjct: 271 RGKRRG---------PQLVEGIKGQVSKIECGSYHTIAYVYTTGQVVSLG 311
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 141/286 (49%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + +K +ACG +H L +T+ G V++ G N GQ
Sbjct: 98 WGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQ 157
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I + V+ I+ G H++AI DG+LY WG G LGLG +
Sbjct: 158 LGLG-NTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRN 216
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P KV + G A G+ +V V+ G + ++G G+LGHG L
Sbjct: 217 DRL--VPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHL--- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG-NHARR 280
P ++ L+ + A G+ H+ + +G++Y +G ++ + +H
Sbjct: 272 ------VPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSP 325
Query: 281 PSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+I P + +V CG HT LT +++WG +G LG G
Sbjct: 326 VQVI--FPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGHG 369
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 17/293 (5%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTL-FLTETGCV 92
L + WG G+ G+LG G E R P + S F+ + ++ CG HT + E +
Sbjct: 36 LSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVICGADHTTAYSDEQMQL 95
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
Y+ G DFG+LG N P I L+ ++ QI+ G H A+T G+++ WG+N
Sbjct: 96 YSWGWGDFGRLGHG-NSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQ 154
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
NGQLGLG + +P K+ G+ K A G E + A+ G + WG G G LG
Sbjct: 155 NGQLGLGNTEDSL--LPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGL 212
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G + L P + +EG K+ + A G+ H+ + +G +Y +G ++
Sbjct: 213 GDRNDRL---------VPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLG 263
Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ P + L + ++ G HT + G+LY WG N+ G +G+
Sbjct: 264 HGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGV 316
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 20/225 (8%)
Query: 19 KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
K+ + G+C + I++ + A L WG G YG LGLG R P S+ E
Sbjct: 171 KIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGE 230
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
+ +ACG HT+ ++ +G +Y G + +GQLG + + L P ++ LK + QI+
Sbjct: 231 KMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDRFISQIAG 289
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G+ H+ A+ DG+LY WG N GQ+G+ P+ +V Q A G+ ++
Sbjct: 290 GWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPV--QVIFPDEQKVAQVACGWRHTL 347
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
A+T V SWG G SG+LGHG+ TP++I L
Sbjct: 348 ALTENKNVFSWGRGTSGQLGHGE---------IIDRNTPKMIDAL 383
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 107/257 (41%), Gaps = 65/257 (25%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI-------------- 167
++ V +S G +HS A+ + WG+ +GQLG G + +P
Sbjct: 19 EQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVV 78
Query: 168 --------------------------------------PTKVECLSGIFTKQAALGFEQS 189
P +E L GI KQ A G
Sbjct: 79 ICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHC 138
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+AVT G+V SWG +G+LG G E S+L P+ I EGV VK+ AAG
Sbjct: 139 LAVTDAGQVHSWGRNQNGQLGLGNTEDSLL----------PQKIHAFEGVCVKMIAAGAE 188
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSG 306
H+A I E+G +Y +G + + N P +S + + V+ CG HT ++S
Sbjct: 189 HTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSS 248
Query: 307 GELYTWGSNENGCLGIG 323
G+LYT+G ++ G LG G
Sbjct: 249 GDLYTYGWSKYGQLGHG 265
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 152/337 (45%), Gaps = 67/337 (19%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG+G+ E S + P C F+ LK +ACG H+LFL G VY G N G
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64
Query: 102 QLG-------------------------------ISEN---------------IGYSLEP 115
QLG ++E +G + E
Sbjct: 65 QLGHDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEA 124
Query: 116 LRISGLKKE-----VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-KAAKVIPIPT 169
+R+ L K+ + Q+ G HH A++ DG+L++WG+NS+GQLGLGK + + + P P
Sbjct: 125 VRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPL 184
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
K C GI Q + G + S A++ G V WG +G+LG E P
Sbjct: 185 KSLC--GIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQ---------DRAVP 233
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
IK L KV + G H+A + + G ++ FG+ + ++ + P + +L
Sbjct: 234 CHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMG 293
Query: 290 SE--EVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+E ++ CG HT + S G +Y +G N G LG G
Sbjct: 294 TEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Query: 42 LWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG G+LGLG E S P + L ++ GG H+ L+ +G V+ G N
Sbjct: 160 VWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSA 219
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+++ ++ P I L+ ++VV IS G H++A+T +G L+ +G S GQ LG
Sbjct: 220 GQLGLNDEQDRAV-PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ--LGH 276
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
+ + P+P +V L G Q A G ++A V G + ++G G+LG G
Sbjct: 277 DSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT+ G ++ G GQ
Sbjct: 214 WGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG L P R+ L EV QI+ G +H+ A + G +Y +G N+ GQLG G +
Sbjct: 274 LGHDSTRNEPL-PRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIR 332
Query: 161 AAKVIPIPT---KVECLSGIFTK 180
+ P+P + C+ +T+
Sbjct: 333 GSAKSPVPVSNIQPLCIGNAYTR 355
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 45/171 (26%)
Query: 198 VLSWGAGGSGRLGHG-QESSI------------------------LGFLRSTSEYT---- 228
+L WG+ G+G+LG G E+S+ L L S YT
Sbjct: 2 MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSN 61
Query: 229 -------------PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
P L+ L+ K+ + G HS ++E G+V+ +G ++
Sbjct: 62 SCGQLGHDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTA 121
Query: 276 NHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A R P LI KL +V+CG +H L+ G+L+ WG N +G LG+G
Sbjct: 122 EEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLG 172
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPL-RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E+ G EP+ ++G + +V ++ G HS A++ G+++ WG S+GQLGL
Sbjct: 64 GQLG-HESEGSKPEPIGALAG--QHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL S++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 136/279 (48%), Gaps = 16/279 (5%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG S S+ P+ A + +ACG +H++ L++ G V++ G GQLG++
Sbjct: 64 GQLGHESEGSKPEPI--GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI 121
Query: 109 IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
P I L ++ ++QIS G H A+ DG+ + WG+NS GQLGLGK+
Sbjct: 122 EDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS- 180
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +V+ L GI Q A G S A++ G V WG SG+LG E
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER---------DRE 231
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+P +K L KV + G H+A + ++G V+ FG + ++ N P + +L
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291
Query: 288 PYSE--EVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
SE ++ CG +HT + S G +Y +G G LG G
Sbjct: 292 MGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG S+ P + + L +A GGAH+ L+ +G V+ G N G
Sbjct: 161 WGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDERDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNV 335
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G HH+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 122 bits (305), Expect = 3e-25, Method: Composition-based stats.
Identities = 91/285 (31%), Positives = 141/285 (49%), Gaps = 25/285 (8%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G+LGLGS ++ RP +A ++ A+ACGG+H+L + G +++ G N
Sbjct: 1057 WGYNSDGQLGLGSSGTYSTKNRPQKINAIS--NVAAIACGGSHSLAVARDGSLWSWGYNY 1114
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+GQLG+ +N + P +++ + V I+ G ++S A+T DG ++ WG NS+GQLGLG
Sbjct: 1115 YGQLGLGDNYSKT-TPQKVNAISN-VAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGD 1172
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P KVE LS + A G + S+A+T G V SWG G+LG
Sbjct: 1173 NEDR--NTPQKVEVLSNV--AAIAAGEDHSLALTRDGSVWSWGRNSRGQLGLDD------ 1222
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TP+ + + +K AAG HS I E G + +G ++
Sbjct: 1223 ---NDDRNTPQPVTTISNIKA--IAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLA 1277
Query: 280 RPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLG 321
+ K+ VV G YH+ LT G L+ WG N++G +G
Sbjct: 1278 NENTPQKVKVISNVVGLSGGNYHSLALTEDGALWAWGDNDDGQIG 1322
Score = 114 bits (286), Expect = 5e-23, Method: Composition-based stats.
Identities = 80/281 (28%), Positives = 136/281 (48%), Gaps = 21/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG+G ++R P + A+A G H L T++G V+A G ND GQ
Sbjct: 141 WGGNYYGQLGMGDNDNRLTPSKTPGLS--DVAAIAGGDYHALAATQSGEVWAMGRNDHGQ 198
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + ++ P++++GL V ++ G S A+ DG ++ WG N + QLG G A
Sbjct: 199 LGFTGD--HADAPVQVAGLSN-VKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGI-AG 254
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ + P + LS I A G ++A+ G V +WGA GSG+LG G
Sbjct: 255 EAVATPAPIAVLSNI--TAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFE------- 305
Query: 223 STSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TP+ + + V A+G+ HS + +G ++ +G+ ++ + P
Sbjct: 306 -----TPKAPGRVSSLADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLP 360
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ +S + + G H+ + + G +++WG N G LG+
Sbjct: 361 AQVSSISNAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGV 401
Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats.
Identities = 80/252 (31%), Positives = 124/252 (49%), Gaps = 24/252 (9%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++ A+ACGG+H+L L G ++ G N +GQLG+ +N+ + P +++ L VV ++ G
Sbjct: 598 NVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKT-TPRKVNALSN-VVAMAAG 655
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+T+DG L+ WG N+ GQLGLG + P KV +S + A G+ S+A
Sbjct: 656 DRHSLALTLDGSLWSWGDNTYGQLGLGDNDHR--NTPRKVNAISNVVA--IAAGYRHSLA 711
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T G V SWG G+LG G + TP+ + + +K A G +S
Sbjct: 712 LTRDGSVWSWGNNTRGQLGLGD---------NDDRNTPQPVTTISNIKA--IAVGNNYSI 760
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHA-----RRPSLISKLPYSEEVVCGGYHTCVLTSG 306
I E G V+ +G ++ G H P + + + G H+ LT
Sbjct: 761 AISEEGLVWAWGYNCSGQLGI--GTHGSLADENTPQKVIVISNVVGLSAGSSHSIALTED 818
Query: 307 GELYTWGSNENG 318
G L+ WG+NE G
Sbjct: 819 GALWAWGNNEAG 830
Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats.
Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 19/280 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG DY +LGLG +R P ++ ++A G +L L G ++A G N +G
Sbjct: 90 VWGRNDYNQLGLGDDINRLAPEQAPVVS--NIVSVAAGRLFSLALASDGSLWAWGGNYYG 147
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ +N L P + GL +V I+ G +H+ A T GE++ G+N +GQLG
Sbjct: 148 QLGMGDN-DNRLTPSKTPGLS-DVAAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDH 205
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A P +V LS + K A G S+A+ G V +WG S +LG G +
Sbjct: 206 ADA---PVQVAGLSNV--KSVAAGEFFSLALKNDGTVWAWGNNESAQLGTG--------I 252
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP I L + AAG H+ + E+G V+ +G ++ F + + P
Sbjct: 253 AGEAVATPAPIAVLSNITA--IAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETPKAP 310
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+S L + G +H+ LTS G L+ WG+N +G LG
Sbjct: 311 GRVSSLADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLG 350
Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 124/233 (53%), Gaps = 16/233 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LGLG S+ P +A ++ A+A G H+L LT G +++ G N +GQ
Sbjct: 621 WGYNYYGQLGLGDNVSKTTPRKVNALS--NVVAMAAGDRHSLALTLDGSLWSWGDNTYGQ 678
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ +N + P +++ + VV I+ GY HS A+T DG ++ WG N+ GQLGLG
Sbjct: 679 LGLGDN-DHRNTPRKVNAISN-VVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDD 736
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P V +S I K A+G S+A++ G V +WG SG+LG G S+
Sbjct: 737 RNTPQP--VTTISNI--KAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSL----- 787
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
E TP+ + + V +AG HS + E+G ++ +G+ ++ +E
Sbjct: 788 -ADENTPQKVIVISNVVG--LSAGSSHSIALTEDGALWAWGNNEAGQIAAEEA 837
Score = 104 bits (260), Expect = 5e-20, Method: Composition-based stats.
Identities = 78/250 (31%), Positives = 119/250 (47%), Gaps = 18/250 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE--PLRISGLKKEVVQISTGYH 133
+A G H L L G V++ G N GQLG+ + YS + P +I+ + V I+ G
Sbjct: 1038 IAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISN-VAAIACGGS 1096
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS A+ DG L+ WG N GQLGLG +K P KV +S + A G S+A+T
Sbjct: 1097 HSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTP--QKVNAISNV--AAIAAGEYYSLALT 1152
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G V SWG G+LG G + TP+ ++ L V AAG HS +
Sbjct: 1153 RDGSVWSWGDNSDGQLGLGD---------NEDRNTPQKVEVLSNVAA--IAAGEDHSLAL 1201
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+G V+ +G + ++ + + P ++ + + + G H+ ++ G + WG
Sbjct: 1202 TRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAIAAGNSHSFAISEEGLAWAWG 1261
Query: 314 SNENGCLGIG 323
N +G LGIG
Sbjct: 1262 YNYDGQLGIG 1271
Score = 100 bits (249), Expect = 8e-19, Method: Composition-based stats.
Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 18/251 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE--PLRISGLKKEVVQISTGY 132
++A GG H L L G V++ G N GQLG+ YS E P +I+ + V I+ G
Sbjct: 548 SIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISN-VAAIACGG 606
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
HS A+ DG + WG N GQLGLG +K P KV LS + A G S+A+
Sbjct: 607 SHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTP--RKVNALSNVVAMAA--GDRHSLAL 662
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G + SWG G+LG G + TPR + + V V IAA G+ HS
Sbjct: 663 TLDGSLWSWGDNTYGQLGLGD---------NDHRNTPRKVNAISNV-VAIAA-GYRHSLA 711
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+ +G V+ +G+ ++ + + P ++ + + + G ++ ++ G ++ W
Sbjct: 712 LTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAIAVGNNYSIAISEEGLVWAW 771
Query: 313 GSNENGCLGIG 323
G N +G LGIG
Sbjct: 772 GYNCSGQLGIG 782
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 16/249 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHH 134
+A GG +L L G +++ G N GQLG+ ++ P ++ L +I+ G +H
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP-AAKIAAGDNH 1044
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ A+ DG ++ WG NS+GQLGLG P K+ +S + A G S+AV
Sbjct: 1045 ALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNV--AAIACGGSHSLAVA 1102
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + SWG G+LG G + S+ TP+ + + V AAG +S +
Sbjct: 1103 RDGSLWSWGYNYYGQLGLGD---------NYSKTTPQKVNAISNVAA--IAAGEYYSLAL 1151
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+G V+ +GD + ++ + P + L + G H+ LT G +++WG
Sbjct: 1152 TRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAIAAGEDHSLALTRDGSVWSWG 1211
Query: 314 SNENGCLGI 322
N G LG+
Sbjct: 1212 RNSRGQLGL 1220
Score = 80.9 bits (198), Expect = 7e-13, Method: Composition-based stats.
Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 19/243 (7%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
H+L L G V+ G ND+ QLG+ ++I L P + + + +V ++ G S A+ D
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGLGDDIN-RLAPEQ-APVVSNIVSVAAGRLFSLALASD 135
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G L+ WG N GQLG+G ++ P +K LS + A G ++A T G+V W
Sbjct: 136 GSLWAWGGNYYGQLGMGDNDNRLTP--SKTPGLSDV--AAIAGGDYHALAATQSGEV--W 189
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G R HGQ LGF T ++ ++ VK AAG S + +G V+
Sbjct: 190 AMG---RNDHGQ----LGF---TGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWA 239
Query: 262 FGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+G+ ++ G P+ I+ L + G H L G ++ WG+N +G L
Sbjct: 240 WGNNESAQLGTGIAGEAVATPAPIAVLSNITAIAAGRRHAMALAEDGSVWAWGANGSGQL 299
Query: 321 GIG 323
G G
Sbjct: 300 GFG 302
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 24/246 (9%)
Query: 83 TLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
T+FL G +A G+ D Q G +N + EP +G +++ HS A
Sbjct: 25 TIFLIAPGAAFAADSDGDGVED-AQDGCPDNF-FKSEP-GFTGCGNAEPMVASRLDHSLA 81
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+ DG +++WG+N QLGLG ++ P + +S I + A F S+A+ G
Sbjct: 82 LKGDGTVWVWGRNDYNQLGLGDDINRLAP--EQAPVVSNIVSVAAGRLF--SLALASDGS 137
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ +WG G+LG G + R T TP L V A G H+ ++G
Sbjct: 138 LWAWGGNYYGQLGMGDNDN-----RLTPSKTPGL------SDVAAIAGGDYHALAATQSG 186
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
V+ G ++ F G+HA P ++ L + V G + + L + G ++ WG+NE+
Sbjct: 187 EVWAMGRNDHGQLGFT-GDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAWGNNES 245
Query: 318 GCLGIG 323
LG G
Sbjct: 246 AQLGTG 251
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 18/251 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGIS--ENIGYSLEPLRISGLKKEVVQISTGYH 133
+A GG +L L G V++ G N GQLG+ EN P + L I+ G
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDV-FTPTNVDALPL-AASIAAGGG 554
Query: 134 HSSAITVDGELYMWGKNS-NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A+ DG ++ WG+NS P K+ +S + A G S+A+
Sbjct: 555 HALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNV--AAIACGGSHSLAL 612
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G SWG G+LG G + S+ TPR + L V AAG HS
Sbjct: 613 ARDGSFWSWGYNYYGQLGLGD---------NVSKTTPRKVNALSNVVA--MAAGDRHSLA 661
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+ +G ++ +GD ++ + +H P ++ + + G H+ LT G +++W
Sbjct: 662 LTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAIAAGYRHSLALTRDGSVWSW 721
Query: 313 GSNENGCLGIG 323
G+N G LG+G
Sbjct: 722 GNNTRGQLGLG 732
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
++ G + S A+ DG L+ WG N GQLGLG + + PTKV+ L + A G
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP--AAKIAAGDN 1043
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
++A+ G V SWG G+LG G + +++ P+ I + V A G
Sbjct: 1044 HALALAPDGSVWSWGYNSDGQLGLGSSGTY------STKNRPQKINAISNVAA--IACGG 1095
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
HS + +G ++ +G ++ + P ++ + + G Y++ LT G
Sbjct: 1096 SHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAIAAGEYYSLALTRDG 1155
Query: 308 ELYTWGSNENGCLGIG 323
+++WG N +G LG+G
Sbjct: 1156 SVWSWGDNSDGQLGLG 1171
Score = 37.7 bits (86), Expect = 6.9, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 43 WGNGDYGRLGLG---SLESRWRP---VVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
WG G+LG+G SL P +V S ++ L+ G +H++ LTE G ++A G
Sbjct: 771 WGYNCSGQLGIGTHGSLADENTPQKVIVIS-----NVVGLSAGSSHSIALTEDGALWAWG 825
Query: 97 LNDFGQLGISENIGYSLEPLRI--SGLKKEVVQISTGYHHSSAITVDGELY 145
N+ GQ+ E I Y P+++ SG EV + Y A D ELY
Sbjct: 826 NNEAGQIAAEEAIEYIDNPVQVFQSG---EVFHL---YFDVDADGADDELY 870
>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
musculus]
gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
Length = 972
Score = 122 bits (305), Expect = 3e-25, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP V G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E + + +P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNELLM-------NHRSPQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHML 400
>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 852
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 139/290 (47%), Gaps = 26/290 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LG G+ +R PV ++A+A H+L + + G V+A G+N GQ
Sbjct: 164 WGPNDYGQLGDGTTTNRPVPVQVGGLS--GIRAVAASSDHSLAVRDDGTVWAWGINSSGQ 221
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P++++GL + +++ G +S A+ DG ++ WG NS+GQLG G
Sbjct: 222 LG-DGTTNDRLTPVQVAGL-SSIKRVAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTD 279
Query: 163 KVIPIPTKVECLSGIFTKQAA----LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +V+ LS + AA LG +AV G G V +WG GSG+LG G
Sbjct: 280 RL--TPGRVKGLSEVVEVSAAKYSLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGT----- 332
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFL-------HSACIDENGRVYIFGDRAVDKML 271
+T TP + EL+GVK F +S + +G V+ +G + ++
Sbjct: 333 ----TTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLG 388
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
RP+ ++ L V H + G +++WG N NG LG
Sbjct: 389 DGTTISRSRPAQVNALSGITAVSASSDHALAMRDDGTVWSWGKNTNGKLG 438
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---------GAHTLFLTETGCVY 93
WGN G+LG G+ R PV S E +KA+A G G+++L + G V+
Sbjct: 320 WGNNGSGQLGDGTTTDRLTPVQVS--ELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVW 377
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
A G N GQLG I S P +++ L + +S H+ A+ DG ++ WGKN+NG
Sbjct: 378 AWGSNSTGQLGDGTTISRS-RPAQVNALSG-ITAVSASSDHALAMRDDGTVWSWGKNTNG 435
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG A ++IP+ +V LSG+ + A G SV+V GK +WG G G LG G
Sbjct: 436 KLGDETTAHRLIPV--QVHGLSGV--RSVAAGESHSVSVREDGKAWAWGYRGMGLLGDGA 491
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
FL + P L +IA+ G S + E+ ++++G ++ +
Sbjct: 492 M-----FL----SFVPVQTMGLT-ATAQIASHGN-RSLAVKEDNTLWVWGSSSLGDL--G 538
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+G+ P S L + V G ++ + + G L+ WGSN G LG G
Sbjct: 539 DGSTGAHPVPSSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDG 588
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 126/264 (47%), Gaps = 30/264 (11%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
A+A G HTL L G V+A G ND+GQLG + P+++ GL + ++
Sbjct: 143 PAVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPV-PVQVGGLSG-IRAVAASSD 200
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS A+ DG ++ WG NS+GQLG G ++ P+ +V LS I K+ A G S+AV
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPV--QVAGLSSI--KRVAAGDGYSLAVH 256
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA-----GFL 248
G G V +WG SG+LG G +T TP +K L V V+++AA G
Sbjct: 257 GDGTVWAWGINSSGQLGDGT---------TTDRLTPGRVKGLSEV-VEVSAAKYSLLGSA 306
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG---------GYH 299
H + +G V+ +G+ ++ P +S+L + + G G +
Sbjct: 307 HVLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSY 366
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ + G ++ WGSN G LG G
Sbjct: 367 SLAVRGDGTVWAWGSNSTGQLGDG 390
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 131/283 (46%), Gaps = 23/283 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G LG GS + PV S + +KA+A G ++L + G ++A G N G
Sbjct: 528 VWGSSSLGDLGDGSTGAH--PVPSSILDD--VKAVAAGNDYSLAVRNNGSLWAWGSNSIG 583
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG L P+ ++GL+ VV + + S A+ DG ++ WG NS GQLG G
Sbjct: 584 QLGDGSTTNR-LTPVPVNGLEN-VVGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGSTI 641
Query: 162 AKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P P + + G+ T S+A+ G V +WG G+LG G
Sbjct: 642 NRSTPGPVGGLVHIVGVATSGG-----HSLALRNDGTVWAWGGNHDGQLGDGT------- 689
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T++ P + L GVK AA + SA + +NG V+ +GD ++
Sbjct: 690 --TTNQPKPVQVSGLSGVKAVAAAI--VSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLT 745
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L+S L + + G +H L + G ++ WG N LG G
Sbjct: 746 PVLVSGLSGVKALASGNHHFLALRNDGTVWAWGDNYYSQLGDG 788
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 110/269 (40%), Gaps = 65/269 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG GS +R PV + E + A + +L L G V+A GLN GQ
Sbjct: 577 WGSNSIGQLGDGSTTNRLTPVPVNGLEN--VVGAAASFSVSLALRSDGTVWAWGLNSVGQ 634
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S P + GL +V ++T HS A+ DG ++ WG N +GQLG G
Sbjct: 635 LGDGSTINRS-TPGPVGGLV-HIVGVATSGGHSLALRNDGTVWAWGGNHDGQLGDGTTTN 692
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P +V LSG+ K A S V G V +WG SG+LG G
Sbjct: 693 Q--PKPVQVSGLSGV--KAVAAAIVSSAVVRDNGTVWAWGDNYSGQLGDGT--------- 739
Query: 223 STSEYTPRLIKELEGVK------------------------------------------- 239
+T TP L+ L GVK
Sbjct: 740 TTDRLTPVLVSGLSGVKALASGNHHFLALRNDGTVWAWGDNYYSQLGDGTRTQRSTPVQV 799
Query: 240 -----VKIAAAGFLHSACIDENGRVYIFG 263
VK+ AAG HS + ++G V+ +G
Sbjct: 800 RGLSDVKLIAAGENHSMAVRKDGTVWTWG 828
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV+ S +KALA G H L L G V+A G N + Q
Sbjct: 727 WGDNYSGQLGDGTTTDRLTPVLVSGLS--GVKALASGNHHFLALRNDGTVWAWGDNYYSQ 784
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++ GL +V I+ G +HS A+ DG ++ WG N++GQLG G
Sbjct: 785 LGDGTRTQRS-TPVQVRGLS-DVKLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNGLLDF 842
Query: 163 KVIPIP 168
+P+P
Sbjct: 843 SALPVP 848
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ ++ +PV S +KA+A + + + G V+A G N GQ
Sbjct: 677 WGGNHDGQLGDGTTTNQPKPVQVSGLS--GVKAVAAAIVSSAVVRDNGTVWAWGDNYSGQ 734
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+ +SGL V +++G HH A+ DG ++ WG N QLG G +
Sbjct: 735 LGDGTTTDR-LTPVLVSGLSG-VKALASGNHHFLALRNDGTVWAWGDNYYSQLGDGTRTQ 792
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ P+ +V LS + K A G S+AV G V +WG SG+LG+G
Sbjct: 793 RSTPV--QVRGLSDV--KLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNG 838
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 123/282 (43%), Gaps = 23/282 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG G++ + PV + +A G +L + E ++ G + G
Sbjct: 479 WGYRGMGLLGDGAMFLSFVPVQTMGLT--ATAQIASHGNRSLAVKEDNTLWVWGSSSLGD 536
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + S + +V ++ G +S A+ +G L+ WG NS GQLG G
Sbjct: 537 LGDGSTGAHPVP----SSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTN 592
Query: 163 KVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+P +E + G AA F S+A+ G V +WG G+LG G
Sbjct: 593 RLTPVPVNGLENVVG-----AAASFSVSLALRSDGTVWAWGLNSVGQLGDGS-------- 639
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ + TP + L + V +A +G HS + +G V+ +G ++ + +P
Sbjct: 640 -TINRSTPGPVGGLVHI-VGVATSGG-HSLALRNDGTVWAWGGNHDGQLGDGTTTNQPKP 696
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + V + V+ G ++ WG N +G LG G
Sbjct: 697 VQVSGLSGVKAVAAAIVSSAVVRDNGTVWAWGDNYSGQLGDG 738
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 137/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L E +V ++ G HS A++ G+L+ WG S+GQLGL + + +P ++ L+
Sbjct: 81 LADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEESVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRAQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 EDR--ESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T E PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEEDRE-SPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G + SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
Length = 1152
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 145/284 (51%), Gaps = 17/284 (5%)
Query: 43 WGNGDYGRLGLG-SLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LG G SL++ P C+ +K +ACGG HTLFL E G VY+ G N
Sbjct: 4 WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG S P ++ L +E + I+ G HS A+++ G LY WG ++GQLG
Sbjct: 64 GQLGHSHE---GTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLG-HA 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
IP ++ LS +Q + G + +A+ G++ +WG G+LG G G
Sbjct: 120 TVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGN-----G 174
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F+ S+ +P+ +K LEG+ + AG HS + +G V+ +G + ++ +
Sbjct: 175 FI---SQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKE 231
Query: 280 RPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + L + V CG HT +LT G L+T+G+ +G LG
Sbjct: 232 TPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLG 275
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 141/283 (49%), Gaps = 17/283 (6%)
Query: 45 NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
NG+ G+LG + PV A E+H +K +ACG +H+L L+ G +Y+ G + GQLG
Sbjct: 61 NGE-GQLGHSHEGTHPAPVATLA-EEH-IKHIACGQSHSLALSLQGNLYSWGAGNDGQLG 117
Query: 105 ISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ YS P I L ++++ Q+S G H A+ DG+L+ WG+N++GQLGLG
Sbjct: 118 HATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFIS 177
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P KV+ L GI Q G S A++ G V WG +G+LG E
Sbjct: 178 QSS-PQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQV------- 229
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
+ TP +K L KV + G H+A + + G ++ FG ++ ++ P
Sbjct: 230 --KETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRR 287
Query: 284 ISKLPYSE--EVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L SE ++ CG HT + S G LY +G + G LG G
Sbjct: 288 VLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGTG 330
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+ G+LG ++E R P + + ++ ++CG H L L + G ++ G N G
Sbjct: 108 WGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ P ++ L+ + Q++ G HS A+++ G ++ WGKNS GQLGL +
Sbjct: 168 QLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K P V+ L + G E + +T G + ++GAGGSG+LGH
Sbjct: 228 QVK--ETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLH----- 280
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+E PR + EL G +V A G H+ A + +G +Y FG + ++ N+ +
Sbjct: 281 ----NEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGTGHENNVK 336
Query: 280 RPSLI 284
P+++
Sbjct: 337 CPTVV 341
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 115/234 (49%), Gaps = 19/234 (8%)
Query: 96 GLNDFGQLGISENIGYSL-EPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G + FGQLG ++ ++ EP + L V +++ G H+ + DG++Y G N G
Sbjct: 5 GHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEG 64
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG + P+ T L+ K A G S+A++ G + SWGAG G+LGH
Sbjct: 65 QLGHSHEGTHPAPVAT----LAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGH-- 118
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-- 271
+++ + R PR+IK+L K++ + G H + ++G+++ +G ++
Sbjct: 119 -ATVEHYSR-----IPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLG 172
Query: 272 --FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
F + ++ + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 173 NGFISQSSPQKVKSLEGIPLAQ-VTAGGSHSFALSLSGAVFGWGKNSAGQLGLN 225
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG ++ GQLG G + P K+ A G + ++ + G+V S G G
Sbjct: 4 WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH E + P + L +K A G HS + G +Y +G
Sbjct: 64 GQLGHSHEGT-----------HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGN 112
Query: 267 VDKMLFQEGNH-ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ H +R P +I KL +++ CG H L G+L+TWG N +G LG+G
Sbjct: 113 DGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLG 172
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+L WG G+LG+G + SE P VK A G H+ + E+G
Sbjct: 1 MLCWGHSAFGQLGNGH-----SLKNAVSE--PCACTFSLATCVKEVACGGKHTLFLMEDG 53
Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
+VY G ++ EG H P+ ++ L + + + CG H+ L+ G LY+WG+
Sbjct: 54 QVYSCGWNGEGQLGHSHEGTH---PAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGA 110
Query: 315 NENGCLG 321
+G LG
Sbjct: 111 GNDGQLG 117
>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1679
Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats.
Identities = 89/287 (31%), Positives = 148/287 (51%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
G G +G+LGLG S+ + F ++ + + G+ HTL LT+ G VY+ G +FG
Sbjct: 393 GKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGEFG 452
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG N+ P I G+ K +++ IS G HS+AIT DG+LY WG+ +G+LG G
Sbjct: 453 KLG-HGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGD 511
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
+ + +PT V + Q A G +V ++ V ++GAG +G+LGHG
Sbjct: 512 SSIQ--RVPTLVRSIDA--ASQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGN----- 562
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ EY P+++ L+G+++K AAG S + G +Y++G + + H
Sbjct: 563 ----TKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPCLGVGAADAVHL 618
Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ L + ++ G H L++ E+Y+WG+N G G+G
Sbjct: 619 -LPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCGLG 664
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 35/244 (14%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
YA G N QL + N L P + K +Q+ G + + A+ DG L+ GK S+
Sbjct: 340 YAWGSNSSHQL-VEGNKDKILTPKKNDAFKN-AIQLEAGQYCTFALFDDGSLHACGKGSH 397
Query: 153 GQLGLGKKAAKVIPIPTKVECLS--GIFTKQ-----AALGFE-QSVAVTGGGKVLSWGAG 204
G+LGLG ++K +CL +F + ++ G + ++A+T G V SWG G
Sbjct: 398 GKLGLGDSSSK--------QCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDG 449
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV----KVKIAAAGFLHSACIDENGRVY 260
G+LGHG + T +L K + GV + +AG HSA I ++G +Y
Sbjct: 450 EFGKLGHGNVA------------TQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLY 497
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG-ELYTWGSNENGC 319
+G+ ++ + + R P+L+ + + +V G HT VL+ ++T+G+ +NG
Sbjct: 498 TWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCSHTVVLSKDEMTVWTFGAGDNGK 557
Query: 320 LGIG 323
LG G
Sbjct: 558 LGHG 561
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 24/228 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+G++G+LG G++ ++ P V+ F+ + ++ G H+ +T+ G +Y G + G
Sbjct: 446 WGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHG 505
Query: 102 QLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMW--GKNSNGQLG 156
+LG ++ S++ R+ L + + Q++ G H+ ++ D E+ +W G NG+LG
Sbjct: 506 RLGHGDS---SIQ--RVPTLVRSIDAASQVAAGCSHTVVLSKD-EMTVWTFGAGDNGKLG 559
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G K+ P V+ L GI K+ A G + S+A+T G + WG G LG G +
Sbjct: 560 HGN--TKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPC--LGVGAADA 615
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+ P++++ L V + + G H + + VY +G+
Sbjct: 616 V--------HLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGN 655
>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Ailuropoda melanoleuca]
Length = 1011
Score = 121 bits (304), Expect = 4e-25, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 159/324 (49%), Gaps = 31/324 (9%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 38 SKFWFKNDIPAFLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSTVNKPTCVKALK 95
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
+K ACG HTL TE G VYA+G N+ GQLG+ + + S + ++++ Q+
Sbjct: 96 PEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQL 155
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DGEL+MWG NS GQ+GL K + +P +V G + G+
Sbjct: 156 SAGSNTSAALTEDGELFMWGDNSEGQIGL--KNITNVCVPQQVTV--GKPISWISCGYYH 211
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAG 246
S VT G++ ++G SG+LG ++ + R+ + + G+ K+ A G
Sbjct: 212 SAFVTTEGELYTFGEPESGKLGLPKQLLV----------NHRMPQSVPGIPEKVVQVACG 261
Query: 247 FLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
H+ + E VY FG + LF+ P +I + + CG H
Sbjct: 262 GGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFE----TPVPKVIEHIKDLKISSIFCGENH 316
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T ++T G +YT+G +G LG+G
Sbjct: 317 TALITDLGLMYTFGDGRHGKLGLG 340
Score = 42.7 bits (99), Expect = 0.24, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F + ++ +ACGG HTL
Sbjct: 329 FGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTL 372
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 144/286 (50%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG + SL ++ RP + +A E + + CG AH+L LT G VY+ G N G
Sbjct: 372 GNNDHGQLGHDVESLPNK-RPQLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVG 430
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + + P I + K+VVQI+ G++H A+T GELY WG N+ GQLGLG
Sbjct: 431 QLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMT 490
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
KV PT V+ L+G+ A G S AV+ G + WG G+LG +
Sbjct: 491 NEKV-STPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN----- 544
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P ++ L + V+ + G S + G V+ G ++ N+
Sbjct: 545 ----SRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEIL 600
Query: 281 PSLISKLPYSE--EVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P ++ +L S+ ++ CG HT + S G++Y +G + G LGIG
Sbjct: 601 PRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIG 646
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 123/250 (49%), Gaps = 12/250 (4%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHS 135
ACG +HTL LT G +Y+ G ND GQLG + P ++ L+ ++ Q G HS
Sbjct: 353 ACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHS 412
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+T G++Y WG N+ GQLG + I IP + ++ Q A G +A+T
Sbjct: 413 LALTNWGQVYSWGSNAVGQLGQETDTTRQI-IPRLIRSIAAKQVVQIAAGHYHCLALTNS 471
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G++ +WG+ G+LG G + + TP L++ L GV + A G HS + +
Sbjct: 472 GELYAWGSNAYGQLGLGMTNEKVS--------TPTLVQSLAGVPIAFIACGGNHSFAVSK 523
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWG 313
+G ++ +G ++ + N + P+ + L V CG + LT+GG ++T G
Sbjct: 524 SGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCG 583
Query: 314 SNENGCLGIG 323
+ G LG G
Sbjct: 584 AGTFGQLGHG 593
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 18/207 (8%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTK 180
KE+ + + G H+ +T DG++Y G N +GQLG + +P P + L
Sbjct: 347 KEIARAACGASHTLLLTNDGKMYSCGNNDHGQLG---HDVESLPNKRPQLLTALENYIIT 403
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
QA G S+A+T G+V SWG+ G+L GQE+ +T + PRLI+ + +V
Sbjct: 404 QACCGTAHSLALTNWGQVYSWGSNAVGQL--GQETD------TTRQIIPRLIRSIAAKQV 455
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCG 296
AAG H + +G +Y +G A ++ L P+L+ L P + + CG
Sbjct: 456 VQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIA-FIACG 514
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
G H+ ++ G ++ WG N G LG+
Sbjct: 515 GNHSFAVSKSGAIFGWGKNTFGQLGLN 541
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+TVDGE G G++ A ++ +P K++ + +AA G ++ +T GK
Sbjct: 310 MTVDGENVECGP-IQGEV-FPSLAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGK 367
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ S G G+LGH E S P+L+ LE + A G HS + G
Sbjct: 368 MYSCGNNDHGQLGHDVE--------SLPNKRPQLLTALENYIITQACCGTAHSLALTNWG 419
Query: 258 RVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+VY +G AV + L QE + R+ P LI + + ++ G YH LT+ GELY WG
Sbjct: 420 QVYSWGSNAVGQ-LGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWG 478
Query: 314 SNENGCLGIG 323
SN G LG+G
Sbjct: 479 SNAYGQLGLG 488
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 111/246 (45%), Gaps = 32/246 (13%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LGLG + E P + + + +ACGG H+ ++++G ++ G N FG
Sbjct: 477 WGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 536
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+ S L LR G++ +S G S +T G ++ G + GQLG
Sbjct: 537 QLGLNDLNSRQFPTQLRTLRSLGVR----YVSCGDDFSVFLTAGGGVFTCGAGTFGQLGH 592
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG---- 212
G ++ +P V L G Q A G ++A V GK+ +G G G+LG G
Sbjct: 593 GSCNNEI--LPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGN 650
Query: 213 ----------QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG---FLHSACIDENGRV 259
+S IL F SE IK + V++ + +A F ACI NG +
Sbjct: 651 YNTPQIVRGPWQSQILTFSVQMSEELAA-IKPDDTVELDLMSAVETIFKSLACI--NGSL 707
Query: 260 YIFGDR 265
+ D
Sbjct: 708 LLPNDE 713
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 137/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G H+ A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGL-MTTEDAVAVPRVIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G S+A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 815
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GNPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 142/289 (49%), Gaps = 21/289 (7%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCV 92
L + +WG+ +YG+ G E P + S+ ++CG ++ +T +G +
Sbjct: 4 NLSKSGVVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDL 63
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G GQLG N+ L P R++ K VVQ++ H++AI +GELY WG + N
Sbjct: 64 ILWGYGGCGQLGFG-NLEDCLVP-RVNLSLKNVVQVACSDRHTAAILSNGELYTWGCSKN 121
Query: 153 GQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG G+ + V+ P KV+ L G Q + G + +T K L+WG G GR
Sbjct: 122 GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGR 181
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG I +TP+LI+ L G+ +K + G H+A + G++Y+FG A
Sbjct: 182 LGHGDTQDI---------FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232
Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWG 313
K+ F + P L+ P + +V G H+ +T G++YTWG
Sbjct: 233 KLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG 280
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 27/288 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G G+LG G+LE P V + + ++ +AC HT + G +Y G + G
Sbjct: 65 LWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVVQVACSDRHTAAILSNGELYTWGCSKNG 122
Query: 102 QLG-------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNG 153
+LG IS N+ +P+++ L+ E V+Q+S G +H+ +T D + WG G
Sbjct: 123 KLGHGQFELSISNNV--VSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQG 180
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G + I P +E L+G+ K+ + G + + GK+ +G G G+LG G
Sbjct: 181 RLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238
Query: 214 ESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+L PRL++ LE +++ + G HSA + + G+VY +G +F
Sbjct: 239 TDDVL---------IPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIF 289
Query: 273 QEGNHA-RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
H P +S L + ++ CG H+ L+ G++YTWG +N
Sbjct: 290 NGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKN 337
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 123/244 (50%), Gaps = 17/244 (6%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGE 143
L+++G V G +++GQ G S+ S P + GL+ + ++S G ++S+AIT G+
Sbjct: 5 LSKSGVV-VWGSSEYGQHG-SKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGD 62
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L +WG GQLG G ++P +V LS Q A + A+ G++ +WG
Sbjct: 63 LILWGYGGCGQLGFGNLEDCLVP---RVN-LSLKNVVQVACSDRHTAAILSNGELYTWGC 118
Query: 204 GGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+G+LGHGQ E SI + S P +K LEG KV + G H+ C+ ++ + +
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQ----PMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTW 174
Query: 263 GDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
G ++ + P LI L P +E+ CGG+HT +L G+LY +G G
Sbjct: 175 GLGLQGRLGHGDTQDIFTPKLIESLAGLPI-KEISCGGHHTAILLVTGKLYMFGGGAFGK 233
Query: 320 LGIG 323
LG G
Sbjct: 234 LGFG 237
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+ A WG G GRLG G + + P + + +K ++CGG HT L TG +Y G
Sbjct: 169 KKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGG 228
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
FG+LG + L L+ ++ ++S G HS+A+T G++Y WG+ G+LG
Sbjct: 229 GAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQ--GGRLG 286
Query: 157 -LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ P ++ L F + G SVA++ G + +WG + +GHG
Sbjct: 287 HIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM--TKNIGHG 341
>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
sapiens]
gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
Length = 815
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG YG+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P +I L + +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG---HDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL S++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG S+ P + + L +A GGAH+ L+ +G V+ G N G
Sbjct: 161 WGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDERDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNV 335
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G HH+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
Length = 815
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVF 364
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 28/275 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A ++ +ACGG+H+ + G +Y GL ++G+
Sbjct: 3026 WGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGR 3085
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L P + L+ + V+Q++ G + A+T G +Y WG G+LG G
Sbjct: 3086 LGHGDNT-TQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGG 3144
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P P +E L+G+ Q G + S+A+T G+V +WG G RLGHG ++ +
Sbjct: 3145 SEGCSVPHP--IERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHV-- 3200
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P+L++ L+G KV A G LH + +NG+VY +GD Q+GN
Sbjct: 3201 -------RKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHG----QQGNSTT 3249
Query: 279 ---RRPSLISKLP--YSEEVVCGGYHT---CVLTS 305
R+P+L+ L V CG H+ C L S
Sbjct: 3250 TVNRKPALVQGLEGCKISRVACGSSHSIAWCTLDS 3284
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 126/249 (50%), Gaps = 17/249 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G+H L LT G VY+ G DFG+LG + + P+ I+ L K VV ++ G HHS+AI
Sbjct: 487 GSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCD-SPMLINELHGKSVVNVACGSHHSAAI 545
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
T GEL+ WG+ S G+LGLG + + I P V L G+ A G Q++A+ G
Sbjct: 546 TASGELFTWGRGSFGRLGLG--STEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTG 603
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V SWG G G+LG G S P+L+ +L+G+ V G +SA + +N
Sbjct: 604 SVYSWGDGEYGKLGRGG---------SEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKN 654
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
G V+ +G+ K+ H R P + L + + G +H T GEL +WG
Sbjct: 655 GAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGR 714
Query: 315 NENGCLGIG 323
N+ G LG G
Sbjct: 715 NDKGQLGEG 723
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 116/254 (45%), Gaps = 17/254 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G + G+LG N P I L+ KEVV I+ G
Sbjct: 4027 AINSGGKHCLALSAEGEVYSWGEGEDGKLG-HGNRSPCDRPRAIESLRGKEVVDIAAGGA 4085
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
HS+ IT GELY WGK G+LG G + P V+ L G A G Q++
Sbjct: 4086 HSACITSTGELYSWGKGRYGRLGHGDSEDQTKP--KLVDALKGYRVTDVACGSGDAQTLC 4143
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I L+G+ V G S
Sbjct: 4144 ITDDDSVWSWGDGDYGKLGRGG---------SDGCKVPMKIDALQGLGVIKVECGSQFSV 4194
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ +H RRP + L + + CG H T GE+
Sbjct: 4195 ALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEV 4254
Query: 310 YTWGSNENGCLGIG 323
YTWG N+ G LG G
Sbjct: 4255 YTWGDNDEGQLGDG 4268
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 15/262 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP + + +A GGAH+ +T TG +Y+ G +G+
Sbjct: 4047 WGEGEDGKLGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGR 4106
Query: 103 LGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ + L + G + V +G + IT D ++ WG G+LG G
Sbjct: 4107 LGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRG-- 4164
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ L G+ + G + SVA+T G V +WG G RLGHG E I
Sbjct: 4165 GSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHI--- 4221
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
PR L+G K+ A G LH + G VY +GD ++ N +R
Sbjct: 4222 ------RRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQR 4275
Query: 281 PSLISKLPYSE--EVVCGGYHT 300
P L++ L + V CG H+
Sbjct: 4276 PRLVAALQGKKINRVACGSAHS 4297
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 135/286 (47%), Gaps = 20/286 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + +P ++ ++ +K +A GG H + LT G V++ G D
Sbjct: 2972 GEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3031
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I L+ K V I+ G HS+AI +G+LY WG G+LG G
Sbjct: 3032 GKLGHFSRMNCD-KPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGD 3090
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P V+ L G Q ALG Q++A+T G V SWG G G+LG G
Sbjct: 3091 NTTQLRP--KLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGG---- 3144
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P I+ L GV V G S + ++G+V+ +G ++ H
Sbjct: 3145 -----SEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAH 3199
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
R+P L+ L + V G H + G++Y WG N++G G
Sbjct: 3200 VRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQG 3245
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 106/220 (48%), Gaps = 15/220 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G YGRLG G E + +P + A + + + +ACG A TL +T+ V++ G D+
Sbjct: 4099 WGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDY 4158
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G + P++I L+ V+++ G S A+T G +Y WGK +LG G
Sbjct: 4159 GKLGRGGSDGCKV-PMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGT 4217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I P + L G A G VA T G+V +WG G+LG G ++I
Sbjct: 4218 EDH--IRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAI-- 4273
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
PRL+ L+G K+ A G HS N V
Sbjct: 4274 -------QRPRLVAALQGKKINRVACGSAHSLAWSTNKPV 4306
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 23/266 (8%)
Query: 70 KHSLKALAC----GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
+L L C GG+ +LF +T+ G ++A G G+LG+ + G +P +++ L +
Sbjct: 2941 NETLSTLKCVQIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQY 3000
Query: 125 VVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
V++ + +G H+ A+TVDG+++ WG+ +G+LG + P +E L +
Sbjct: 3001 VIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALRSKRVRD 3058
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G S A+ G + +WG G GRLGHG +T++ P+L+K LEG +V
Sbjct: 3059 IACGGSHSAAIISNGDLYTWGLGEYGRLGHGD---------NTTQLRPKLVKALEGQRVI 3109
Query: 242 IAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
A G + + ++G VY +GD K+ P I +L ++ CG
Sbjct: 3110 QVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGA 3169
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
+ LT G+++TWG + LG G
Sbjct: 3170 QFSLALTKSGQVWTWGKGDYFRLGHG 3195
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 130/289 (44%), Gaps = 21/289 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV C L GG TLF +T G V ATG G
Sbjct: 3941 WGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQL-IGGEQTLFSITGDGKVCATGYGAGG 3999
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+LGI + P I ++ ++ I++G H A++ +GE+Y WG+ +G+LG G
Sbjct: 4000 RLGIGGTDSVA-TPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHG 4058
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +E L G A G S +T G++ SWG G GRLGHG
Sbjct: 4059 NRSP--CDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGD----- 4111
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + P+L+ L+G +V A +G + CI ++ V+ +GD K+ +
Sbjct: 4112 ----SEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSD 4167
Query: 277 HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P I L +V CG + LT G +YTWG + LG G
Sbjct: 4168 GCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4216
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD+G+LG G + P++ + S+ +ACG H+ +T +G ++ G FG+
Sbjct: 502 WGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGR 561
Query: 103 LGI--SENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG+ +E+I L P +SGL VV ++ +G + A+ G +Y WG G+LG
Sbjct: 562 LGLGSTEDI---LTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGR 618
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P V+ L G+ + G + S AV G V +WG G +LGHG E +
Sbjct: 619 G--GSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHV 676
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PR ++ L G V + G H E G + +G
Sbjct: 677 ---------RFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWG 713
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 19/242 (7%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G ++ G N GQLG E L P+ L VQ+ G +IT DG++
Sbjct: 3935 SGQIWGWGHNHRGQLGGVEGAKVKL-PVSCETLATMRPVQLIGGEQTLFSITGDGKVCAT 3993
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+LG+G + + PT +E + +F ++ A+ G + +A++ G+V SWG G
Sbjct: 3994 GYGAGGRLGIGGTDS--VATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGE 4051
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S PR I+ L G +V AAG HSACI G +Y +G
Sbjct: 4052 DGKLGHGNRSPC---------DRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKG 4102
Query: 266 AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
++ + +P L+ L +V CG T +T +++WG + G LG
Sbjct: 4103 RYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLG 4162
Query: 322 IG 323
G
Sbjct: 4163 RG 4164
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 10/186 (5%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+ ++++WG N QLG G K +K I P E LS + Q G + VT GK+
Sbjct: 2912 IQTQVFVWGLNDKDQLG-GPKGSK-IKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLF 2969
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+ G +GRLG G + + R + + +IK KV + + G H+ + +G+V
Sbjct: 2970 ACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIK-----KVAVHSGG-RHAMALTVDGKV 3023
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +G+ K+ + +P LI L ++ CGG H+ + S G+LYTWG E
Sbjct: 3024 FSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEY 3083
Query: 318 GCLGIG 323
G LG G
Sbjct: 3084 GRLGHG 3089
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 73/178 (41%), Gaps = 54/178 (30%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G +GRLGLGS E P + S ++ +ACG A T+ L +TG VY+ G ++
Sbjct: 554 WGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEY 613
Query: 101 GQLG---------------------------------ISEN-------------IGYSLE 114
G+LG + +N +G+ E
Sbjct: 614 GKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTE 673
Query: 115 -----PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
P ++ L K V +S G HH A T +GEL WG+N GQLG G K P
Sbjct: 674 EHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEP 731
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
+ ++E +K+ + G H + G VY +G+ K+ + P LI++L + +
Sbjct: 473 LADIEIIKLAAHSEGS-HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINEL-HGK 530
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG +H+ +T+ GEL+TWG G LG+G
Sbjct: 531 SVVNVACGSHHSAAITASGELFTWGRGSFGRLGLG 565
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 132/283 (46%), Gaps = 16/283 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G DYG+LG +R PV E H++ +ACG HTL E G V+A G N GQ
Sbjct: 58 FGLNDYGQLGHCRSRTRAEPV--DGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQ 115
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG++ P + L K+VVQI+ G HS A+T GE+Y WG NS+GQLGLG
Sbjct: 116 LGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSG 175
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P V+ L GI + G + S AVT G V WG G+LG G
Sbjct: 176 TPETK-PCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGD-------- 226
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T P +K L +V G H+A + +G V+ FG ++ + P
Sbjct: 227 -TTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLP 285
Query: 282 SLISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLG 321
+ +L ++ CG HT + S G +Y +G +G LG
Sbjct: 286 RKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLG 328
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 15/247 (6%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS 136
CG HT+ + + G +++ GLND+GQLG + + EP + GL+ + Q++ G H+
Sbjct: 41 CGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRA-EP--VDGLEAHNITQVACGAQHTL 97
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A GE++ WG NSNGQLGL + + ++P P V+ L+ Q A G S+A+T G
Sbjct: 98 AQNEWGEVFAWGSNSNGQLGLNVEES-MMPTPKMVKSLATKQVVQIACGRSHSMALTNVG 156
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
++ WG+ G+LG G T E P L+K L+G+ + + G S + +
Sbjct: 157 EIYCWGSNSHGQLGLGSS--------GTPETKPCLVKLLQGIPISHISCGADFSFAVTPS 208
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
G VY +G + ++ + +P+ + L + + CG HT LT G ++T+G+
Sbjct: 209 GAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGA 268
Query: 315 NENGCLG 321
G LG
Sbjct: 269 GMYGQLG 275
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
L ++VQ+ G +H+ + DG+L+ +G N GQLG + + P V+ L
Sbjct: 32 LVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP----VDGLEAHNIT 87
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q A G + ++A G+V +WG+ +G+LG E S++ TP+++K L +V
Sbjct: 88 QVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMP--------TPKMVKSLATKQV 139
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCG 296
A G HS + G +Y +G + ++ L G +P L+ L P S + CG
Sbjct: 140 VQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPIS-HISCG 198
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +T G +Y WG N G LG+G
Sbjct: 199 ADFSFAVTPSGAVYGWGKNSFGQLGLG 225
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG+ +G+LGLG ++I P Q G ++ V GK+ S+G
Sbjct: 1 MFCWGRMKHGELGLGGLEEEIITSPRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGL 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH RS + P + LE + A G H+ +E G V+ +G
Sbjct: 61 NDYGQLGH---------CRSRTRAEP--VDGLEAHNITQVACGAQHTLAQNEWGEVFAWG 109
Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+ ++ L E + P ++ L + ++ CG H+ LT+ GE+Y WGSN +G L
Sbjct: 110 SNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQL 169
Query: 321 GIG 323
G+G
Sbjct: 170 GLG 172
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 103 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 159
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 160 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 218
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 219 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 270
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 271 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 329
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 330 EEHTAVLTKSGGVFTFGAGSCGQLG 354
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 187 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 246
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 247 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 306
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 307 EDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 357
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 358 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 399
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 88 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 146
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 147 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 196
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 197 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 252
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 253 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 303
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 240 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 299
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 300 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 358
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 359 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 414
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 14/210 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
R++ L V Q + +S + + WG S GQ G+ ++ P +S
Sbjct: 53 RVTCLGDSVAQWIRLWTLASGLDSIRTMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD 112
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
K+ A G SV + G+V + G G+LGH +E + P I L
Sbjct: 113 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN-----------KPEQIGALA 161
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EV 293
+ A G HS + + G+++ +G + ++ L + P LI KL +V
Sbjct: 162 DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 221
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG +H L + G+ +TWG N +G LG+G
Sbjct: 222 SCGNWHCLALAADGQFFTWGKNSHGQLGLG 251
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 293 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 352
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 353 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 411
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 412 CNVKCPSPVK 421
>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
paniscus]
Length = 815
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVIF 364
>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
Length = 1286
Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/282 (30%), Positives = 143/282 (50%), Gaps = 20/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
WG+ + G+LG+G++ P S +KA++ G G H++ L+E G V+ G ND G
Sbjct: 107 WGSNENGQLGIGTVTDMNVPGQVSGLS--GIKAVSGGLGYHSMALSEDGSVWTWGKNDNG 164
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + + P++++GL +V I+ G + S A+ DG ++ WG N +G+LG G
Sbjct: 165 ELGNGTTLQQN-TPVQVAGLN-DVTAIAAGGYFSLALKSDGTVWAWGVNGDGELGDGTTT 222
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P+ +V L+ + A G S+AVT G V +WG G LG G
Sbjct: 223 DRYVPV--QVAGLTDVMA--IAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTR------- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P IK L+ + V +A G+ HS +D G V+ +GD + ++ + P
Sbjct: 272 --TNRTRPVQIKNLQHI-VAVAGGGY-HSLALDRTGNVWSWGDNSQRQLGVGSNASSLIP 327
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S + + E+ GG+H+ + G ++ WG N G LG G
Sbjct: 328 VPVSGIEHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDG 369
Score = 117 bits (294), Expect = 6e-24, Method: Composition-based stats.
Identities = 92/282 (32%), Positives = 136/282 (48%), Gaps = 20/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ +R PV+ + + + G T+ L G V+ G N+ GQ
Sbjct: 57 WGYGDRGQLGNGTWSARTTPVMAKGL--NHVIDVHTGVRSTMALRSDGTVWTWGSNENGQ 114
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI ++ P ++SGL + V GYH S A++ DG ++ WGKN NG+LG G
Sbjct: 115 LGIGTVTDMNV-PGQVSGLSGIKAVSGGLGYH-SMALSEDGSVWTWGKNDNGELGNGTTL 172
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ +V L+ + T AA G+ S+A+ G V +WG G G LG G
Sbjct: 173 QQNTPV--QVAGLNDV-TAIAAGGY-FSLALKSDGTVWAWGVNGDGELGDGT-------- 220
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T Y P + L V AAG HS + ++G V+ +G + + RP
Sbjct: 221 -TTDRYVPVQVAGL--TDVMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNRTRP 277
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
I L + V GGYH+ L G +++WG N LG+G
Sbjct: 278 VQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVG 319
Score = 100 bits (250), Expect = 7e-19, Method: Composition-based stats.
Identities = 79/233 (33%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Query: 43 WG-NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG NGD G LG G+ R+ PV + + A+A GG+H+L +T+ G V+A G N +G
Sbjct: 208 WGVNGD-GELGDGTTTDRYVPVQVAGLT--DVMAIAAGGSHSLAVTQDGTVWAWGKNTYG 264
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + P++I L + +V ++ G +HS A+ G ++ WG NS QLG+G A
Sbjct: 265 TLGDGTRTNRT-RPVQIKNL-QHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNA 322
Query: 162 AKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +IP+P +SGI ++ A G SVA+ G V WG G G+LG G
Sbjct: 323 SSLIPVP-----VSGIEHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGT------- 370
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S++ TP L K + +G L+ I + V + +AVD M Q
Sbjct: 371 --SSTRDTPTLTKAVLDTTPPDPGSGTLNPDSITTDS-VALQWPKAVDNMTEQ 420
Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ GY+H++++ GE+Y WG GQLG G +A+ P+ K L+ + G
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAK--GLNHVIDVHT--GV 92
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
++A+ G V +WG+ +G+LG G T P + L G+K G
Sbjct: 93 RSTMALRSDGTVWTWGSNENGQLGIGT---------VTDMNVPGQVSGLSGIKAVSGGLG 143
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
+ HS + E+G V+ +G ++ P ++ L + GGY + L S
Sbjct: 144 Y-HSMALSEDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTAIAAGGYFSLALKSD 202
Query: 307 GELYTWGSNENGCLGIG 323
G ++ WG N +G LG G
Sbjct: 203 GTVWAWGVNGDGELGDG 219
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 139/282 (49%), Gaps = 21/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LG G+ +R PV + A++ G +H+L L + G V+A G N+ GQ
Sbjct: 249 WGENDYGQLGDGTTATRLSPVQVQNLS--GIIAISSGNSHSLALKDDGTVWAWGDNESGQ 306
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + N Y P ++ GL +V IS G+++S A+ DG +++WG N++GQLG G
Sbjct: 307 LGDGTTNSKYI--PSQVQGLSG-IVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTT 363
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P V L G+ A G S+A+ G V +WG G+LG G +
Sbjct: 364 DRNTAVP--VSGLDGVI--AIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTK------- 412
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
S+ T I L+G+ G HS + ++G V+ +GD ++ P
Sbjct: 413 --VSKNTAVPISGLDGIIA--ITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTP 468
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S +S L + + CG + L G ++ WG+NE G LG G
Sbjct: 469 SQVSNLSGIKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKG 510
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 21/247 (8%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
G +HTL L G V+A G ND+GQLG + I + P+ + GL K V IS G ++S A+
Sbjct: 183 GESHTLALESDGTVWACGENDYGQLGNNNTIDIN-SPIPVEGLNK-VSSISAGKYYSMAL 240
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
DG ++ WG+N GQLG G A ++ P+ +V+ LSGI + G S+A+ G V
Sbjct: 241 KSDGTVWTWGENDYGQLGDGTTATRLSPV--QVQNLSGIIAISS--GNSHSLALKDDGTV 296
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+WG SG+LG G + S+Y P ++ L G+ V I + GF +S + +G
Sbjct: 297 WAWGDNESGQLGDG---------TTNSKYIPSQVQGLSGI-VSI-SCGFYYSMALKNDGT 345
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
V+++GD ++ +G R + +S L + CG H+ L + G ++TWG N
Sbjct: 346 VWVWGDNTSGQL--GDGTTTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGFNA 403
Query: 317 NGCLGIG 323
G LG G
Sbjct: 404 FGQLGDG 410
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 136/282 (48%), Gaps = 23/282 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G DYG+LG + P+ K + +++ G +++ L G V+ G ND+GQL
Sbjct: 200 GENDYGQLGNNNTIDINSPIPVEGLNK--VSSISAGKYYSMALKSDGTVWTWGENDYGQL 257
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G L P+++ L ++ IS+G HS A+ DG ++ WG N +GQLG G +K
Sbjct: 258 G-DGTTATRLSPVQVQNLSG-IIAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSK 315
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
IP++V+ LSGI + + GF S+A+ G V WG SG+LG G +
Sbjct: 316 Y--IPSQVQGLSGIVS--ISCGFYYSMALKNDGTVWVWGDNTSGQLGDG---------TT 362
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
T T + L+GV A G HS + +G V+ +G A ++ +G + +
Sbjct: 363 TDRNTAVPVSGLDGVIA--IACGVNHSMALRNDGTVWTWGFNAFGQL--GDGTKVSKNTA 418
Query: 284 --ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
IS L + CG H+ L G ++ WG N+ G LG G
Sbjct: 419 VPISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNG 460
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 128/283 (45%), Gaps = 27/283 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ S P S +K++ CG + + L G V+A G N++G+
Sbjct: 449 WGDNQYGQLGNGTFISNTTPSQVSNLS--GIKSIFCGYSTSFALKPDGTVWAWGNNEYGE 506
Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + Y E L I +K IS G H A+ DG ++ WG N GQLG G
Sbjct: 507 LGKGFTTRVIYPTETLNIGDIKA----ISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTT 562
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K +P+ +V +SGI A G S+A+ G V +WG G+LG G +
Sbjct: 563 TIKSLPV--QVSGISGITAISA--GGSHSLALKSDGTVWAWGQNNVGQLGDGTKED---- 614
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TP + EL G+ V + S + +G V+++G + + L
Sbjct: 615 -----RNTPVQVSELSGITV--ISNCIYRSFALKNDGTVWVWGSDSYNLPL----EKMTM 663
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P IS L + CG YH L + G ++ WG N G G G
Sbjct: 664 PIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDG 706
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + G+LG G+ S++ P + +++CG +++ L G V+ G N GQ
Sbjct: 299 WGDNESGQLGDGTTNSKYIPSQVQGLS--GIVSISCGFYYSMALKNDGTVWVWGDNTSGQ 356
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + +SGL V+ I+ G +HS A+ DG ++ WG N+ GQLG G K +
Sbjct: 357 LGDGTTTDRN-TAVPVSGLDG-VIAIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTKVS 414
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K +P + L GI G S+A+ G V +WG G+LG+G F+
Sbjct: 415 KNTAVP--ISGLDGII--AITCGTSHSMALKDDGTVWAWGDNQYGQLGNGT------FIS 464
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L G+K G+ S + +G V+ +G+ ++ P+
Sbjct: 465 NT---TPSQVSNLSGIKSIF--CGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPT 519
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + G H L + G ++ WG N G LG G
Sbjct: 520 ETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDG 560
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 133/330 (40%), Gaps = 76/330 (23%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG LG G P +KA++ G +H L L G V+A G N +GQ
Sbjct: 499 WGNNEYGELGKGFTTRVIYP--TETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQ 556
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG SL P+++SG+ + IS G HS A+ DG ++ WG+N+ GQLG G K
Sbjct: 557 LGDGTTTIKSL-PVQVSGISG-ITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKED 614
Query: 163 KVIPI--------------------------------------------PTKVECLSGIF 178
+ P+ P ++ LSGI
Sbjct: 615 RNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPLEKMTMPIQISGLSGII 674
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+ G ++A+ G V +WG G+ G G +T+ P + L GV
Sbjct: 675 AIEC--GTYHNLALKNDGTVWAWGKNNFGQFGDG---------TTTTTNIPVQVSGLSGV 723
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV----- 293
K A G S + +G V+ +G V + PS + + +V
Sbjct: 724 KA--IAVGGNRSIALKSDGTVWQWGRILV----------SVSPSTVETWTTARQVDGLSE 771
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + L + G+++TWG+N+ G LG G
Sbjct: 772 IVSISNNVALKNDGKVFTWGANDYGQLGDG 801
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
++ ++++S G H+ A+ DG ++ G+N GQLG PIP VE L+ + +
Sbjct: 173 IEGPIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIP--VEGLNKVSSI 230
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G S+A+ G V +WG G+LG G ++ L +P ++ L G+
Sbjct: 231 SA--GKYYSMALKSDGTVWTWGENDYGQLGDGTTATRL---------SPVQVQNLSGIIA 279
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
++G HS + ++G V+ +GD ++ N PS + L + CG Y++
Sbjct: 280 --ISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSISCGFYYS 337
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L + G ++ WG N +G LG G
Sbjct: 338 MALKNDGTVWVWGDNTSGQLGDG 360
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 21/175 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+ G G+ + PV S +KA+A GG ++ L G V+ +G+
Sbjct: 695 WGKNNFGQFGDGTTTTTNIPVQVSGLS--GVKAIAVGGNRSIALKSDGTVWQ-----WGR 747
Query: 103 LGIS---ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+ +S + ++ GL E+V IS ++ A+ DG+++ WG N GQLG G
Sbjct: 748 ILVSVSPSTVETWTTARQVDGLS-EIVSIS----NNVALKNDGKVFTWGANDYGQLGDGT 802
Query: 160 KAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
A+V P +E ++G+ + S+ + G + +WG G+LG+G+
Sbjct: 803 TTARVTVAPVSGLEGVAGVASSDTT-----SMVLMNDGTIRAWGKNNFGQLGNGE 852
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAIT 139
++ + L G V+ G ND+GQLG ++ P +SGL+ V +++ S +
Sbjct: 776 SNNVALKNDGKVFTWGANDYGQLGDGTTTARVTVAP--VSGLEG-VAGVASSDTTSMVLM 832
Query: 140 VDGELYMWGKNSNGQLGLGKK 160
DG + WGKN+ GQLG G++
Sbjct: 833 NDGTIRAWGKNNFGQLGNGER 853
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 141/281 (50%), Gaps = 20/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G YG+LG G ++ P ++A+A G H+L LT++G VY+ G FG+
Sbjct: 52 FGMGMYGKLGHGDTANQLAPKKIEGLSD--IQAIAAGTNHSLALTKSGDVYSFGFGLFGR 109
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N LEP +I GL ++ I+ G HS A+T G++Y +G NG GLG
Sbjct: 110 LGHG-NTDSQLEPKKIEGL-SDIQAIAAGDFHSLALTKSGDVYSFG---NGTSGLGHGNT 164
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P K+E LS + + A G S+A+T G V S+G G GRLGHG
Sbjct: 165 EDQSTPKKIESLSDV--QAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGD--------- 213
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ S+ P+ I++L ++ AAG HS + ++G VY FG ++ + + P
Sbjct: 214 TDSQLEPKKIEDLSDIQA--IAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPK 271
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
I L + V G H+ LT GE+Y++G G LG G
Sbjct: 272 KIEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHG 312
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 119/233 (51%), Gaps = 18/233 (7%)
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
V++ G+ +G+LG + L P +I GL ++ I+ G +HS A+T G++Y +G
Sbjct: 48 SVFSFGMGMYGKLGHGDTAN-QLAPKKIEGLS-DIQAIAAGTNHSLALTKSGDVYSFGFG 105
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LG G +++ P K+E LS I + A G S+A+T G V S+G G SG LG
Sbjct: 106 LFGRLGHGNTDSQLEP--KKIEGLSDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG + + TP+ I+ L V+ AAG HS + ++G VY FG ++
Sbjct: 161 HG---------NTEDQSTPKKIESLSDVQA--IAAGGNHSLALTKSGDVYSFGFGLFGRL 209
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L + + GG H+ LT G++Y++G +G LG G
Sbjct: 210 GHGDTDSQLEPKKIEDLSDIQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHG 262
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 139/287 (48%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + ++ +K +A GG H L LT+ G +++ G + G
Sbjct: 3317 GEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDG 3376
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3377 KLGHGNSVSLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3435
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3436 ATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3488
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3489 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3544
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+L+ L + V G H +T G++Y WG N++G G G
Sbjct: 3545 RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3591
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 130/286 (45%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 4350 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4409
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4410 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4469
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4470 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4521
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4522 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4578
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP ++ L + + G H T GE++TWG N+ G LG G
Sbjct: 4579 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4624
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + + ++ +ACG H+ +T +G +Y GL ++G+
Sbjct: 3370 WGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3429
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L S + + V+Q++ G + A+T DG +Y WG G+LG G
Sbjct: 3430 LGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGS 3489
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ ++ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3490 DGCYTPL--LIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3544
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G KV A G LH + + G+VY +GD Q+GN +
Sbjct: 3545 ------RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGSTI 3594
Query: 279 --RRPSLISKLPYS--EEVVCGGYHT 300
++PSL+ +L + V CG H+
Sbjct: 3595 VNKKPSLVHELDDARVNRVSCGSSHS 3620
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4403 WGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 4462
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4463 LGHGDSED-QLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4520
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K+E L+G+ + G + SVA+T G + +WG G RLGHG + +
Sbjct: 4521 -GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHV-- 4577
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4578 -------RRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQ 4630
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4631 RPRLVHALQGKKITRVACGSAHT 4653
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 114/244 (46%), Gaps = 17/244 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
G H L LT+ VY+ G D G+LG + + Y EP + L K + I+ G +S+ +
Sbjct: 514 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYD-EPKLVEALVDKNITFIACGSTYSAVL 572
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
+ +GELY WG+ + G+LG G + + IPT V L+G A G Q++ VT G
Sbjct: 573 SSNGELYTWGRGNYGRLGHGN--SDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASG 630
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V SWG G G+LG G TP+++ +L + V G SA +
Sbjct: 631 IVFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAY 681
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
G VY +G ++ H R P +I L +E+ G +H LT +Y WG
Sbjct: 682 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGR 741
Query: 315 NENG 318
N+ G
Sbjct: 742 NDYG 745
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 133/289 (46%), Gaps = 21/289 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG PV+C + L G L +T G VYATG G+
Sbjct: 4297 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR 4356
Query: 103 LGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG G
Sbjct: 4357 LGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHG 4414
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4415 NRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD----- 4467
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + TP+L++ L+ KV A +G + C+ ++ V+ +GD K+ +
Sbjct: 4468 ----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD 4523
Query: 277 HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P I L +V CG + LT G +YTWG + LG G
Sbjct: 4524 GCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4572
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 144/298 (48%), Gaps = 25/298 (8%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCV 92
Q +WG D +LG G S+ + PV K LK + GG+ TLF+ ++ G +
Sbjct: 3257 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSK--LKPIHIAGGSKTLFVVSQEGKL 3313
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGK 149
YA G G+LG+ ++ EP I L + +++ + +G H+ A+T DG+++ WG+
Sbjct: 3314 YACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGE 3372
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+G+LG G + + P +E L + A G S A+T G++ +WG G GRL
Sbjct: 3373 GEDGKLGHGNSVS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3430
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAV 267
GHG + ++ P+L++ L G +V A G + + +G VY +GD
Sbjct: 3431 GHGD---------TATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDF 3481
Query: 268 DKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
K+ + P LI +L ++ CG + LT GE++TWG + LG G
Sbjct: 3482 GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3539
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 118/243 (48%), Gaps = 21/243 (8%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYM 146
+G +Y G N GQLG E L L +S L+ VQ++ G A+T DG++Y
Sbjct: 4291 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLLAVTADGKVYA 4348
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G + G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4349 TGYGAAGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEG 4406
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 4407 DDGKLGHGNR---LMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGK 4457
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
++ + P L+ L + +V CG T +T +++WG + G L
Sbjct: 4458 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4517
Query: 321 GIG 323
G G
Sbjct: 4518 GRG 4520
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 114/269 (42%), Gaps = 29/269 (10%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P C A + +K L C + L+ +G VY Q P R+ G
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQY-----------PQRVYGF 500
Query: 122 KKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
++ V + + H A+T D +Y WG G+LG G + P VE L
Sbjct: 501 SEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVW--YDEPKLVEALVDKN 558
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G S ++ G++ +WG G GRLGHG ++L P L+ L G
Sbjct: 559 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVL---------IPTLVTALNGH 609
Query: 239 KVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
V A +G + C+ +G V+ +GD K+ + ++ P ++ KL +V
Sbjct: 610 MVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVY 669
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CGG + LT+ GE+YTWG E LG G
Sbjct: 670 CGGQFSAALTAYGEVYTWGKGEGYRLGHG 698
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 114/254 (44%), Gaps = 27/254 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G P + A ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 529 WGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGR 588
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGL 157
L G S+N+ L P ++ L VV ++ G S +T G ++ WG + G+LG
Sbjct: 589 LGHGNSDNV---LIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 645
Query: 158 ----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G K K+ V+ L I + G + S A+T G+V +WG G RLGHG
Sbjct: 646 GGCDGSKTPKI------VDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGN 699
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
E I P++I+ L KVK G H + E+ VY +G ++
Sbjct: 700 EEHI---------RYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPA 750
Query: 274 EGNHARRPSLISKL 287
G P+L L
Sbjct: 751 LGTVVPEPTLCPTL 764
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 124 EVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
E+VQ H S +Y+WG N QLG G K +K I +P E LS +
Sbjct: 3240 EIVQEQMNLQHGSEPPPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPIHI 3297
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G + V+ GK+ + G G +GRLG G +S++ P+LI L +K
Sbjct: 3298 AGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVC---------EPKLIPFLSQYMIKK 3348
Query: 243 AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGY 298
A +G H+ + ++G+++ +G+ K+ +P LI L ++ CG
Sbjct: 3349 MAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSG 3408
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
H+ +TS GELYTWG E G LG G
Sbjct: 3409 HSAAITSSGELYTWGLGEYGRLGHG 3433
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+YG+LG G + P + ++ + CGG + LT G VY G + +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 694
Query: 103 LG--ISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E+I Y P I L K+V ++ G H A+T D +Y WG+N GQ +
Sbjct: 695 LGHGNEEHIRY---PKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDP 749
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V+P PT LSG A G QS A
Sbjct: 750 ALGTVVPEPTLCPTLSGKNIIGLACGLTQSFA 781
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + T+ G V+ G ND GQ
Sbjct: 4561 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4620
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4621 LGDGTTSALQ-RPRLVHALQGKKITRVACGSAHTLA 4655
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 147/298 (49%), Gaps = 25/298 (8%)
Query: 30 WISSTLQRRFAALWGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLT 87
WI + L WG G+ G+ S P VC S+K +ACGG H++FL
Sbjct: 451 WIRTML------CWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLL 504
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYM 146
E G VY GLN GQLG E G +P +I L + +V ++ G HS A++ G+L+
Sbjct: 505 EDGEVYTCGLNTKGQLG-HEREGN--KPEQIGALADQHIVHVACGESHSLALSDRGQLFS 561
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S+GQLGL V +P ++ L+ Q + G +A+ G+ +WG
Sbjct: 562 WGAGSDGQLGLMTTEDSVA-VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSH 620
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G+E S+ +P+ ++ LEG+ + AAG HS + +G V+ +G
Sbjct: 621 GQLGLGKEFP--------SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN 672
Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
++ + P + KL +++VV CG HT VLT G ++T+G+ G LG
Sbjct: 673 AGQLGLSDEKDRESPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 729
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 562 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 621
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 622 QLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 681
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 682 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 732
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 733 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 774
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 463 LGQPGISSNLQGIVAEP-QVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 521
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 522 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 571
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 572 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 627
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 628 EFPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 678
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 615 WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 674
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 675 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 733
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 734 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 789
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 668 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 727
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 728 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 786
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 787 CNVKCPSPVK 796
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P ++ K+ A G SV + G+V + G
Sbjct: 458 WGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 517
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 518 GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 566
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 567 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 626
>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
leucogenys]
Length = 814
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 161/321 (50%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG N+ GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL K + +P +V G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVTNVCVPQQVTI--GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG + +LG R TP+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
+ + EN VY FG + LF+ + P +I + + CG HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFETSD----PKVIENIRDQTISYISCGESHTAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGGCHMVVF 364
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats.
Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 31/253 (12%)
Query: 90 GCVYATGLNDFGQLG---------ISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAIT 139
G +++ G N GQ+G +S+ I + P I LK +V ++ GY HS AIT
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNF-PKLIVPLKDTIVTSVACGYQHSVAIT 1558
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
G + WG NS+ QLGLG+K+ +P PT + L+ I + + G E ++A+ G+V
Sbjct: 1559 YAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNI--QSVSCGSEHTLALDYIGQVF 1616
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G LGHG E +P++I+ L+G+ V G LHS + +N +V
Sbjct: 1617 SWGNGEGGLLGHGNEDVCP---------SPKIIEALKGLNVDFIVCGGLHSLVLTKNRQV 1667
Query: 260 YIFGDR-----AVDKMLF-QEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELY 310
Y +G +DK LF E + P + ++ G H+ L G++Y
Sbjct: 1668 YSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVY 1727
Query: 311 TWGSNENGCLGIG 323
WG N NG +G+G
Sbjct: 1728 GWGYNMNGQIGLG 1740
Score = 88.6 bits (218), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG+ G LG G+ + P + A + ++ + CGG H+L LT+ VY+ G N+ GQ
Sbjct: 1618 WGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQ 1677
Query: 103 LGISENI-----GYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
LGI + + Y P R+ G + V+QI+ G HS A+ ++G++Y WG N NGQ+
Sbjct: 1678 LGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQI 1737
Query: 156 GLGKKA-------AKVIPIPTKVE 172
GLG + ++IP K+E
Sbjct: 1738 GLGMQTDTYPVYEPQLIPKLNKIE 1761
Score = 87.8 bits (216), Expect = 6e-15, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 15/232 (6%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTG 131
+ ++ACG H++ +T G V A G N QLG+ E S+ P I L + +S G
Sbjct: 1544 VTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTN-IQSVSCG 1602
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H+ A+ G+++ WG G LG G + V P P +E L G+ G S+
Sbjct: 1603 SEHTLALDYIGQVFSWGNGEGGLLGHGNE--DVCPSPKIIEALKGLNVDFIVCGGLHSLV 1660
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY--TPRLIK-ELEGVKVKIAAAGFL 248
+T +V SWG G+LG ++ + Y TP+ +K LEGV V AAG
Sbjct: 1661 LTKNRQVYSWGRNEGGQLGIDKK-----LFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEA 1715
Query: 249 HSACIDENGRVYIFG---DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
HS + NG+VY +G + + + + P LI KL E++ C G
Sbjct: 1716 HSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCG 1767
Score = 87.4 bits (215), Expect = 8e-15, Method: Composition-based stats.
Identities = 86/301 (28%), Positives = 134/301 (44%), Gaps = 29/301 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + +LGLG P ++++++CG HTL L G V++ G + G
Sbjct: 1566 WGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQVFSWGNGEGGL 1625
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N P I LK V I G HS +T + ++Y WG+N GQLG+ KK
Sbjct: 1626 LG-HGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQLGIDKKL 1684
Query: 162 AK----VIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +V+ L G+ Q A G S+A+ G+V WG +G++G G ++
Sbjct: 1685 FTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTD 1744
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI---DENGRVYIFGDRAVDKMLFQ 273
+ Y P+LI +L ++ KI G S + E ++ + +D+ Q
Sbjct: 1745 ------TYPVYEPQLIPKLNKIE-KIFCCGLNDSNQLGLEKEPIKITSTTNNILDQYKPQ 1797
Query: 274 EGNHARRPSLISK-------LPYSEEVVCGGYHTCVL----TSGGELYTWGSNENGCLGI 322
+ A I K +P V CG H+ L T L+ WG +++G LGI
Sbjct: 1798 DQKRAVTDVFIPKKMDCFHQIPVL-HVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGI 1856
Query: 323 G 323
G
Sbjct: 1857 G 1857
Score = 42.0 bits (97), Expect = 0.43, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 79/224 (35%), Gaps = 77/224 (34%)
Query: 43 WGNGDYGRLGLGS---------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG + G+LG+ L + R V E + +A G AH+L L G VY
Sbjct: 1670 WGRNEGGQLGIDKKLFTNEKCYLTTPKR--VKGNLEGVGVIQIAAGEAHSLALALNGQVY 1727
Query: 94 ATGLNDFGQLGI-------------------------------SENIGYSLEPLRISGLK 122
G N GQ+G+ S +G EP++I+
Sbjct: 1728 GWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQLGLEKEPIKITSTT 1787
Query: 123 KE------------------------------VVQISTGYHHSSAITV-DGELYM---WG 148
V+ +S G++HS A+ V D + YM WG
Sbjct: 1788 NNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAWG 1847
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +GQLG+G+ +P + L + T A G S+ V
Sbjct: 1848 MHKHGQLGIGETGQNS-SVPRPITYLQDVTTYSMACGSYHSLVV 1890
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 128/261 (49%), Gaps = 14/261 (5%)
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EV 125
A + ++ A++CG AHTL L + G VYA GL+ GQLG+ P I L ++
Sbjct: 29 ALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQI 88
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
VQ+S GY+HS A++ E++ WG+N GQLGLG + K P ++ L GI Q A G
Sbjct: 89 VQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTS-PQLIKSLLGIPFMQIAAG 147
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S +T G + WG G+LG E+ Y P L+K L K+
Sbjct: 148 GAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---------DRYVPNLLKSLRSQKIVYICC 198
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHT-CV 302
G H+A + + G V+ FG ++ +H P + +L S +V CG HT
Sbjct: 199 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAF 258
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+ S G +Y++G NG LG G
Sbjct: 259 VPSSGRIYSFGLGGNGQLGTG 279
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 110 WGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 169
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 170 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 229
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 230 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 283
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 163 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 222
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 223 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 281
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 282 SNRKSPFTVK 291
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 132/286 (46%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG G ++S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3952 GYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4011
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG I Y L + L E+V I+ G HHS+AI+ G LY WGK G+LG G
Sbjct: 4012 KLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSD 4071
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ PT V L G A G Q++ VT V SWG G G+LG G
Sbjct: 4072 DQL--KPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4123
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G VY +G ++ +H R
Sbjct: 4124 ---SDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4180
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP +S L + + G H + GE+YTWG N+ G LG G
Sbjct: 4181 RPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDG 4226
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 140/278 (50%), Gaps = 27/278 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + A + ++ +ACG H+ + G +Y GL ++G+
Sbjct: 3033 WGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3092
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGK 159
LG + + L+P + L + V+Q++ G + A+T DG +Y WG G+LG G
Sbjct: 3093 LGHGDTTTH-LKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGG 3151
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+P V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3152 SDGCYSPLP--VDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV-- 3207
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P L++ L G KV A G LH + + G+VY +GD Q+GN +
Sbjct: 3208 -------RRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGST 3256
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTC--VLTSGGEL 309
R+PSL+ L ++ V CG H+ VLT L
Sbjct: 3257 MVNRKPSLVHNLEDAKVNRVACGSSHSIAWVLTDQPTL 3294
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 134/287 (46%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT+ G V++ G + G
Sbjct: 2980 GEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3039
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 3040 KLGHGNRVSLD-KPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3098
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3099 TTHL--KPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGG----- 3151
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S Y+P + L G+ V G S + + G V+ +G ++ +H
Sbjct: 3152 ----SDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3207
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP+L+ L + V G H +T G++Y WG N++G G G
Sbjct: 3208 RRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 3254
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 130/265 (49%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ + RP + A + +ACGG H+ ++ G +Y G +G+
Sbjct: 4005 WGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGR 4064
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P ++ L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4065 LGHGDS-DDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4122
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4123 -GSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 4179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG-NHA 278
PR + L+G K+ A G LH + G VY +GD D+ +G HA
Sbjct: 4180 -------RRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDN--DEGQLGDGTTHA 4230
Query: 279 RR-PSLISKLPYSE--EVVCGGYHT 300
++ P L+ L V CG HT
Sbjct: 4231 QQSPRLVHALQGKNITRVACGSAHT 4255
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 148/303 (48%), Gaps = 26/303 (8%)
Query: 32 SSTLQRRFAA-LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-T 87
+S +Q+ A +WG D +LG G S+ + PV K LK + GG+ TLF+ +
Sbjct: 2915 ASDVQQNAAVYVWGLNDKDQLG-GLKGSKIKLPVHSEVLSK--LKPIHIAGGSKTLFVVS 2971
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGEL 144
+ G +YA G G+LG+ +N EP I L + +++ + +G H+ A+T DG++
Sbjct: 2972 QEGKLYACGEGTNGRLGLGDNNNVG-EPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKV 3030
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ WG+ +G+LG G + + + P +E L + A G S A+ G++ +WG G
Sbjct: 3031 FSWGEGEDGKLGHGNRVS--LDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLG 3088
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIF 262
GRLGHG +T+ P+L+ L G +V A G + + E+G VY +
Sbjct: 3089 EYGRLGHGD---------TTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSW 3139
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
GD K+ + P + +L +V CG + LT GE++TWG + L
Sbjct: 3140 GDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRL 3199
Query: 321 GIG 323
G G
Sbjct: 3200 GHG 3202
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 132/290 (45%), Gaps = 23/290 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P+ C + LA GG TLF +T G VYATG G
Sbjct: 3899 WGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLA-GGEQTLFAVTADGKVYATGYGALG 3957
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LG S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3958 RLGTGGVDSVMVPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4015
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G A G S A++ G + +WG G GRLGHG
Sbjct: 4016 GNRI--TYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGD---- 4069
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P ++ L+G KV A +G + C+ ++ V+ +GD K+
Sbjct: 4070 -----SDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4124
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4125 DGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4174
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 129/298 (43%), Gaps = 38/298 (12%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
+ T Q A WGN +G GS+ P C A + +K L C L L+ +G
Sbjct: 429 TQTFQEVLA--WGNVHFGS---GSM-----PFYCDAIAEIGVKQLCCTERALLILSLSGK 478
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGK 149
VY Q P + G +VVQI++ H A+T G +Y WG
Sbjct: 479 VYMMYYGSETQY-----------PQSVYGFADDVVQIASHPDGKHYLALTTKGIVYSWGN 527
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G + P +E LS A G S A++ G++L+WG G GRL
Sbjct: 528 GDGGRLGHGDSFS--CDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRL 585
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAV 267
GHG I P ++ L G V A +G + C+ +G V+ +GD
Sbjct: 586 GHGICDDI---------SIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDY 636
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
K+ + ++ P ++ KL +V CGG + LT+ GE+YTWG ++ LG G
Sbjct: 637 GKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHG 694
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 110/244 (45%), Gaps = 21/244 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
G H L LT G VY+ G D G+LG ++ EP I L + V I+ G +S+AI
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCD-EPQVIEVLSDRTVTYIACGSTYSAAI 568
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
+ GEL WG+ S G+LG G I IPT V L+G A G Q++ VT G
Sbjct: 569 SSTGELLTWGRGSYGRLGHG--ICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSG 626
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V SWG G G+LG G S P+++ +L V G SA + +
Sbjct: 627 IVFSWGDGDYGKLGRGG---------SDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAH 677
Query: 257 GRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
G VY +G D GN H R P L+ L + ++ G H +T +Y W
Sbjct: 678 GEVYTWGKG--DHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGW 735
Query: 313 GSNE 316
G N+
Sbjct: 736 GRND 739
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 19/248 (7%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVD 141
TL +G +Y G N GQLG E L PL L +Q++ G A+T D
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKL-PLPCESLSALRPIQLAGGEQTLFAVTAD 3945
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G++Y G + G+LG G + +PT +E + +F K+ A+ G + +A++ G V
Sbjct: 3946 GKVYATGYGALGRLGTG--GVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVY 4003
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G+LGHG + + R P+LI+ L G ++ A G HSA I G +
Sbjct: 4004 SWGEGDDGKLGHGNR---ITYDR------PKLIEALLGTEIVDIACGGHHSAAISSAGWL 4054
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSN 315
Y +G ++ + + +P++++ L + +V CG T +T +++WG
Sbjct: 4055 YTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDG 4114
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 4115 DYGKLGRG 4122
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 108/247 (43%), Gaps = 13/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G S P V ++ +ACG ++ ++ TG + G +G+
Sbjct: 525 WGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGR 584
Query: 103 L--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
L GI ++I ++G V +G + +T G ++ WG G+LG G
Sbjct: 585 LGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGS 644
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V+ L + G + S A+T G+V +WG G RLGHG E +
Sbjct: 645 DGS--KLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHV--- 699
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+L++ L KV+ + G LH I E+ VY +G ++ G
Sbjct: 700 ------RFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSLGAVVSE 753
Query: 281 PSLISKL 287
P+L L
Sbjct: 754 PTLCPTL 760
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
EVVQ +S + + +Y+WG N QLG G K +K I +P E LS + A
Sbjct: 2904 EVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLG-GLKGSK-IKLPVHSEVLSKLKPIHIA 2961
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + V+ GK+ + G G +GRLG G +++ P+ I L +K
Sbjct: 2962 GGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNV---------GEPKPIPFLSQYIIKKV 3012
Query: 244 A--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
A +G H+ + ++G+V+ +G+ K+ +P LI L ++ CG H
Sbjct: 3013 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGH 3072
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ + S GELYTWG E G LG G
Sbjct: 3073 SAAIASNGELYTWGLGEYGRLGHG 3096
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + ++ + CGG + LT G VY G D +
Sbjct: 631 WGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYR 690
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E++ + P + GL+ K+V +S G H AIT D +Y WG+N Q+
Sbjct: 691 LGHGNEEHVRF---PKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSL 747
Query: 160 KAAKVIPIPTKVECLSG 176
A V+ PT LSG
Sbjct: 748 GA--VVSEPTLCPTLSG 762
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP SA + + ++A G H + ++ G VY G ND GQ
Sbjct: 4163 WGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQ 4222
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K + +++ G H+ A
Sbjct: 4223 LGDGTTHAQQ-SPRLVHALQGKNITRVACGSAHTLA 4257
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WG+ D G+LG G+ ++ P + A + ++ +ACG AHTL + T ++
Sbjct: 4215 WGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKATHS 4266
>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cricetulus griseus]
Length = 1136
Score = 120 bits (302), Expect = 7e-25, Method: Composition-based stats.
Identities = 92/322 (28%), Positives = 157/322 (48%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+ G VYA G N+ GQLG+ + + + K + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP V G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV----GKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG + I + +P+ + + +++A G
Sbjct: 240 SAFVTVDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPEKVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + + VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTDK-VVYAFGLGQFGQLGLGTFLFE----TSEPKVIERIKDQKISYISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G +YT+G +G LG+G
Sbjct: 347 LMTDIGLMYTFGDGRHGKLGLG 368
Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGGCHML 400
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 120 bits (302), Expect = 7e-25, Method: Composition-based stats.
Identities = 86/283 (30%), Positives = 129/283 (45%), Gaps = 25/283 (8%)
Query: 43 WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +LG G +S+ P F + +++CG ++ LTE G VY G
Sbjct: 593 WGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGS 652
Query: 100 FGQLGISENIGYSLE----PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+S SLE P ++ L EVV +S GY+HS+A+ +GEL WG +GQL
Sbjct: 653 VKNPPLSTLGNGSLEDQLLPTKVESLS-EVVLVSIGYYHSAALKSNGELLTWGCGEDGQL 711
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + IP V+ ++ + Q G + ++ +T GKV +WG G+LG G
Sbjct: 712 GHGDVLNQT--IPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGD-- 767
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ TP L+ LE + A G H A + V +FG+ A
Sbjct: 768 -------TQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGAA----MGSA 816
Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNE 316
N P ++ L + E + CG Y T LT G++YTWGS +
Sbjct: 817 NIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQ 859
Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats.
Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 22/264 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G + ++ P V H + + CG HT+ LT+ G V+ G +++GQ
Sbjct: 703 WGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQ 762
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + + P+ ++ L+K ++QI+ G H + +T E+ ++G G +
Sbjct: 763 LGLGDT-QKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGN------GAAMGS 815
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A +I +P V L + ++ + G + A+T G V +WG+G LGHG
Sbjct: 816 ANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSG--QELGHGT-------- 865
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ SE P+L+ L ++ + G H A + ++G++Y G ++ +G+ +P
Sbjct: 866 -NQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQGDQ-NKP 923
Query: 282 SLISKLPYSE--EVVCGGYHTCVL 303
I L + V CG H L
Sbjct: 924 KKIDSLLKTTFISVSCGENHNASL 947
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 136 SAITVDGE--LYMWGKNSNGQLGL---GKKAAKVIP--IPT-KVECLSGIFTKQAALGFE 187
SA +D + + WG +SN +LG G++ ++ P +P + + I + G
Sbjct: 580 SATQLDTQRGIMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSI-----SCGSY 634
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S A+T G V WG G S LG + P ++ L +V + + G+
Sbjct: 635 YSAALTENGDVYMWGRGSV----KNPPLSTLGNGSLEDQLLPTKVESLS--EVVLVSIGY 688
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTS 305
HSA + NG + +G ++ + + P ++ + + +V CG HT LT
Sbjct: 689 YHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTK 748
Query: 306 GGELYTWGSNENGCLGIG 323
G+++TWG++E G LG+G
Sbjct: 749 NGKVFTWGTSEYGQLGLG 766
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 144/286 (50%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG L +L ++ RP ++ E + + ++CG AH+L LT G V++ G N G
Sbjct: 61 GNNDHGQLGHDLDTLPNK-RPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG G P I + K VVQI++G +H A+T +GELY WG NS GQLG+G
Sbjct: 120 QLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ KV P+PT ++ L+G+ A G S AV+ G + WG G+LG
Sbjct: 180 SEKV-PMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND------- 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P ++ L + V+ + G S + G V+ G ++ ++
Sbjct: 232 --LNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV 289
Query: 281 PSLISKLPYSE--EVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
P + +L S+ ++ CG HT + S G++Y +G G LGIG
Sbjct: 290 PRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 335
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 139/286 (48%), Gaps = 14/286 (4%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E P + + + CG +HTLFLT+ G +YA G ND
Sbjct: 6 WGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + + P R++ L+ ++ IS G HS A+T G+++ WG N+ GQLG
Sbjct: 66 GQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDA 125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P P ++ + Q A G +A+T G++ +WG+ G+LG G S +
Sbjct: 126 ENGRQ-PTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVP 184
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P LI+ L GV + A G HS + ++G ++ +G ++ + N
Sbjct: 185 M--------PTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRC 236
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L + CG + LT+ G ++T G+ G LG G
Sbjct: 237 YPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHG 282
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG ++G+LGLG + + +P K++ + G ++ +T GK+ + G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH L + P+ + LE + + G HS + G+V+ +G
Sbjct: 63 NDHGQLGHD--------LDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 114
Query: 264 DRAVDKMLFQEGNHARRPS--LISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
AV + L + + R+P+ +I + + ++ G YH LT+ GELY WGSN G
Sbjct: 115 SNAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQ 173
Query: 320 LGIG 323
LGIG
Sbjct: 174 LGIG 177
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L SR P ++ ++CG ++FLT G V+ G FGQ
Sbjct: 219 WGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQ 278
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLG 158
LG + + P ++ L ++ QI+ G H+ A + G++Y +G GQLG+G
Sbjct: 279 LG-HGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 335
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG ++ +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HVREGNKPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSYGQLG 275
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HVREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHVREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L S G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLG 172
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G +GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH +
Sbjct: 228 EDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN----- 280
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 281 ----DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQ 273
L +T + PRLI++L + + G H + +G+ + +G + ++ L +
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 274 EGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
E P + L P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EYPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|375010994|ref|YP_004987982.1| Regulator of chromosome condensation (RCC1) repeat protein
[Owenweeksia hongkongensis DSM 17368]
gi|359346918|gb|AEV31337.1| Regulator of chromosome condensation (RCC1) repeat protein
[Owenweeksia hongkongensis DSM 17368]
Length = 440
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 139/282 (49%), Gaps = 22/282 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +YG++G + E P K +K +A G H+L + E G V+A G N++GQL
Sbjct: 43 GRNNYGQIGDSTYEDHNTPYHVERLPK--IKIIARGYDHSLAIDEQGRVWAWGRNNYGQL 100
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + I ++ L ++ ++ + + G+ H+ A+ DG ++ WG N G+LG G +
Sbjct: 101 GSAIPIDFNTPQLVVN--HRDFISVEGGHWHTVALKEDGTVWTWGHNFYGELGDGTREHS 158
Query: 164 VIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P + L GI K ++G+ ++A+ G+V SWG+ G LGH F
Sbjct: 159 QYPRSVVKKDKTTLQGI-VKIVSVGY-HTLALDKNGEVYSWGSNDFGELGH--------F 208
Query: 221 LRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
Y ++ EG++ +K A G+ HS I+ENG ++++G ++ +H
Sbjct: 209 HNVIQHYAEKV----EGLQNIKSIAVGWHHSVAINENGELFMWGSDPSTQVRESTSDHFN 264
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
I LP ++ CG +H+ + G+++ WG+N G LG
Sbjct: 265 SIVKIDSLPPMVKIACGSWHSLAIDETGQVWGWGNNRYGMLG 306
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+ G H+ + DG+++ G+N+ GQ +G + P VE L I K A G++
Sbjct: 23 VDAGNGHAIVLDKDGKVFTMGRNNYGQ--IGDSTYEDHNTPYHVERLPKI--KIIARGYD 78
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL-IKELEGVKVKIAAAG 246
S+A+ G+V +WG G+LG S+I TP+L + + + V+ G
Sbjct: 79 HSLAIDEQGRVWAWGRNNYGQLG----SAI-----PIDFNTPQLVVNHRDFISVE---GG 126
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGYHTC 301
H+ + E+G V+ +G ++ H++ P + K + ++V GYHT
Sbjct: 127 HWHTVALKEDGTVWTWGHNFYGELGDGTREHSQYPRSVVKKDKTTLQGIVKIVSVGYHTL 186
Query: 302 VLTSGGELYTWGSNENGCLG 321
L GE+Y+WGSN+ G LG
Sbjct: 187 ALDKNGEVYSWGSNDFGELG 206
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ACG H+L + ETG V+ G N +G LG + I Y+ P +I G K + +I G S
Sbjct: 278 IACGSWHSLAIDETGQVWGWGNNRYGMLGTKDTISYTY-PKKIPGFKG-IEEIGGGCFQS 335
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
AI G+ Y +G N++GQ G G A I +PTK++
Sbjct: 336 LAIDKKGDFYTFGGNASGQQGQGDFA--YIFVPTKLDL 371
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE--YTPRLIKELEGVKVKIAAA 245
++ + GKV + G G++G ST E TP ++ L K+KI A
Sbjct: 29 HAIVLDKDGKVFTMGRNNYGQIG-----------DSTYEDHNTPYHVERLP--KIKIIAR 75
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
G+ HS IDE GRV+ +G ++ P L+ V G +HT L
Sbjct: 76 GYDHSLAIDEQGRVWAWGRNNYGQLGSAIPIDFNTPQLVVNHRDFISVEGGHWHTVALKE 135
Query: 306 GGELYTWGSNENGCLGIG 323
G ++TWG N G LG G
Sbjct: 136 DGTVWTWGHNFYGELGDG 153
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 139/287 (48%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + ++ +K +A GG H L LT+ G +++ G + G
Sbjct: 3312 GEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDG 3371
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG ++ +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3372 KLGHGNSVSLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3430
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3431 ATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3483
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3484 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3539
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+L+ L + V G H +T G++Y WG N++G G G
Sbjct: 3540 RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3586
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 130/286 (45%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 4317 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4376
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4377 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4436
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4437 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4488
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4489 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4545
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP ++ L + + G H T GE++TWG N+ G LG G
Sbjct: 4546 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4591
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + + ++ +ACG H+ +T +G +Y GL ++G+
Sbjct: 3365 WGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3424
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L S + + V+Q++ G + A+T DG +Y WG G+LG G
Sbjct: 3425 LGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGS 3484
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ ++ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3485 DGCYTPL--LIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3539
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G KV A G LH + + G+VY +GD Q+GN +
Sbjct: 3540 ------RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGSTI 3589
Query: 279 --RRPSLISKLPYS--EEVVCGGYHT 300
++PSL+ +L + V CG H+
Sbjct: 3590 VNKKPSLVHELDDARVNRVSCGSSHS 3615
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4370 WGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 4429
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4430 LGHGDSED-QLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4487
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K+E L+G+ + G + SVA+T G + +WG G RLGHG + +
Sbjct: 4488 -GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHV-- 4544
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4545 -------RRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQ 4597
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4598 RPRLVHALQGKKITRVACGSAHT 4620
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 114/244 (46%), Gaps = 17/244 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
G H L LT+ VY+ G D G+LG + + Y EP + L K + I+ G +S+ +
Sbjct: 506 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYD-EPKLVEALVDKNITFIACGSTYSAVL 564
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
+ +GELY WG+ + G+LG G + + IPT V L+G A G Q++ VT G
Sbjct: 565 SSNGELYTWGRGNYGRLGHGN--SDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASG 622
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V SWG G G+LG G TP+++ +L + V G SA +
Sbjct: 623 IVFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAY 673
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
G VY +G ++ H R P +I L +E+ G +H LT +Y WG
Sbjct: 674 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGR 733
Query: 315 NENG 318
N+ G
Sbjct: 734 NDYG 737
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 133/289 (46%), Gaps = 21/289 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG PV+C + L G L +T G VYATG G+
Sbjct: 4264 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR 4323
Query: 103 LGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG G
Sbjct: 4324 LGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHG 4381
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4382 NRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD----- 4434
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + TP+L++ L+ KV A +G + C+ ++ V+ +GD K+ +
Sbjct: 4435 ----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD 4490
Query: 277 HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P I L +V CG + LT G +YTWG + LG G
Sbjct: 4491 GCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4539
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 144/298 (48%), Gaps = 25/298 (8%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCV 92
Q +WG D +LG G S+ + PV K LK + GG+ TLF+ ++ G +
Sbjct: 3252 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSK--LKPIHIAGGSKTLFVVSQEGKL 3308
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGK 149
YA G G+LG+ ++ EP I L + +++ + +G H+ A+T DG+++ WG+
Sbjct: 3309 YACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGE 3367
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+G+LG G + + P +E L + A G S A+T G++ +WG G GRL
Sbjct: 3368 GEDGKLGHGNSVS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3425
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAV 267
GHG + ++ P+L++ L G +V A G + + +G VY +GD
Sbjct: 3426 GHGD---------TATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDF 3476
Query: 268 DKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
K+ + P LI +L ++ CG + LT GE++TWG + LG G
Sbjct: 3477 GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3534
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 118/243 (48%), Gaps = 21/243 (8%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYM 146
+G +Y G N GQLG E L L +S L+ VQ++ G A+T DG++Y
Sbjct: 4258 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLLAVTADGKVYA 4315
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G + G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4316 TGYGAAGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEG 4373
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 4374 DDGKLGHGNR---LMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGK 4424
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
++ + P L+ L + +V CG T +T +++WG + G L
Sbjct: 4425 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4484
Query: 321 GIG 323
G G
Sbjct: 4485 GRG 4487
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 114/269 (42%), Gaps = 29/269 (10%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P C A + +K L C + L+ +G VY Q P R+ G
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQY-----------PQRVYGF 492
Query: 122 KKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
++ V + + H A+T D +Y WG G+LG G + P VE L
Sbjct: 493 SEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVW--YDEPKLVEALVDKN 550
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G S ++ G++ +WG G GRLGHG ++L P L+ L G
Sbjct: 551 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVL---------IPTLVTALNGH 601
Query: 239 KVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
V A +G + C+ +G V+ +GD K+ + ++ P ++ KL +V
Sbjct: 602 MVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVY 661
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CGG + LT+ GE+YTWG E LG G
Sbjct: 662 CGGQFSAALTAYGEVYTWGKGEGYRLGHG 690
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 114/254 (44%), Gaps = 27/254 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G P + A ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 521 WGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGR 580
Query: 103 L--GISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
L G S+N+ L P ++ L + V +G + +T G ++ WG + G+LG
Sbjct: 581 LGHGNSDNV---LIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 637
Query: 158 ----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G K K+ V+ L I + G + S A+T G+V +WG G RLGHG
Sbjct: 638 GGCDGSKTPKI------VDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGN 691
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
E I P++I+ L+ KVK G H + E+ VY +G ++
Sbjct: 692 EEHI---------RYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPA 742
Query: 274 EGNHARRPSLISKL 287
G P+L L
Sbjct: 743 LGTIVPEPTLCPTL 756
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 124 EVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
E+VQ H S +Y+WG N QLG G K +K I +P E LS +
Sbjct: 3235 EIVQEQMNLQHGSEPPPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPIHI 3292
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G + V+ GK+ + G G +GRLG G +S++ P+LI L +K
Sbjct: 3293 AGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVC---------EPKLIPFLSQYMIKK 3343
Query: 243 AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGY 298
A +G H+ + ++G+++ +G+ K+ +P LI L ++ CG
Sbjct: 3344 VAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSG 3403
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
H+ +TS GELYTWG E G LG G
Sbjct: 3404 HSAAITSSGELYTWGLGEYGRLGHG 3428
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+YG+LG G + P + ++ + CGG + LT G VY G + +
Sbjct: 627 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 686
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG E+I Y P I LK K+V ++ G H A+T D +Y WG+N GQ +
Sbjct: 687 LGHGNEEHIRY---PKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDP 741
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
++P PT LSG A G QS A
Sbjct: 742 ALGTIVPEPTLCPTLSGKNIIGLACGLTQSFA 773
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + T+ G V+ G ND GQ
Sbjct: 4528 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4587
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4588 LGDGTTSALQ-RPRLVHALQGKKITRVACGSAHTLA 4622
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 142/289 (49%), Gaps = 21/289 (7%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCV 92
L + +WG+ +YG+ G E P + S+ ++CG ++ +T +G +
Sbjct: 4 NLSKSGVVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDL 63
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G GQLG N+ L P R++ K V+Q++ H++AI +GELY WG + N
Sbjct: 64 ILWGYGGCGQLGFG-NLEDCLVP-RVNLSLKNVIQVACSDRHTAAILSNGELYTWGCSKN 121
Query: 153 GQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG G+ + V+ P KV+ L G Q + G + +T K L+WG G GR
Sbjct: 122 GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGR 181
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG I +TP+LI+ L G+ +K + G H+A + G++Y+FG A
Sbjct: 182 LGHGDTQDI---------FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232
Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWG 313
K+ F + P L+ P + +V G H+ +T G++YTWG
Sbjct: 233 KLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG 280
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 27/288 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG G G+LG G+LE P V + + ++ +AC HT + G +Y G + G
Sbjct: 65 LWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVIQVACSDRHTAAILSNGELYTWGCSKNG 122
Query: 102 QLG-------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNG 153
+LG IS N+ +P+++ L+ E V+Q+S G +H+ +T D + WG G
Sbjct: 123 KLGHGQFELSISNNV--VSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQG 180
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G + I P +E L+G+ K+ + G + + GK+ +G G G+LG G
Sbjct: 181 RLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238
Query: 214 ESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+L PRL++ LE +++ + G HSA + + G+VY +G +F
Sbjct: 239 TDDVL---------IPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIF 289
Query: 273 QEGNHA-RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
H P +S L + ++ CG H+ L+ G++YTWG +N
Sbjct: 290 NGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKN 337
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 122/244 (50%), Gaps = 17/244 (6%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGE 143
L+++G V G ++GQ G S+ S P + GL+ + ++S G ++S+AIT G+
Sbjct: 5 LSKSGVV-VWGSTEYGQHG-SKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGD 62
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L +WG GQLG G ++P +V LS Q A + A+ G++ +WG
Sbjct: 63 LILWGYGGCGQLGFGNLEDCLVP---RVN-LSLKNVIQVACSDRHTAAILSNGELYTWGC 118
Query: 204 GGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+G+LGHGQ E SI + S P +K LEG KV + G H+ C+ ++ + +
Sbjct: 119 SKNGKLGHGQFELSISNNVVSQ----PMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTW 174
Query: 263 GDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
G ++ + P LI L P +E+ CGG+HT +L G+LY +G G
Sbjct: 175 GLGLQGRLGHGDTQDIFTPKLIESLAGLPI-KEISCGGHHTAILLVTGKLYMFGGGAFGK 233
Query: 320 LGIG 323
LG G
Sbjct: 234 LGFG 237
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+ A WG G GRLG G + + P + + +K ++CGG HT L TG +Y G
Sbjct: 169 KKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGG 228
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
FG+LG + L L+ ++ ++S G HS+A+T G++Y WG+ G+LG
Sbjct: 229 GAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQ--GGRLG 286
Query: 157 -LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ P ++ L F + G SVA++ G + +WG + +GHG
Sbjct: 287 HIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM--TKNIGHG 341
>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
Length = 1062
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 144/301 (47%), Gaps = 36/301 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + +P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 319 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 378
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G K
Sbjct: 379 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 437
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G GR
Sbjct: 438 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 495
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 496 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 542
Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ Q GN HA + P+ + KL + EE+ CG YH VLTS E+YTWG NG LG
Sbjct: 543 PVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 602
Query: 323 G 323
G
Sbjct: 603 G 603
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 129/269 (47%), Gaps = 34/269 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-I 128
++ +ACGG H + +T+ G ++ G G+L G+ NI +P I L ++ +
Sbjct: 296 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELV 352
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS A+T+ G+LY WGK G LG G + + +P L GI A G
Sbjct: 353 ACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYH 411
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ ++G G G LGHG + S+ + PR + L+G++ AA G
Sbjct: 412 TAVVTSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVW 462
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
H+A + E +G+++ +GD DK GN + P+ ++ L P +
Sbjct: 463 HTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGNKEPKLVPTCVAALVEPNFCQ 520
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS G LG
Sbjct: 521 VACGHSLTVALTTSGHVYTMGSPVYGQLG 549
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G+ E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 488 WGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 547
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S G + P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 548 LGNSHADGKT--PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDV 605
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ PT VE L K A G + AV + W +G
Sbjct: 606 DDRN--SPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASG 643
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + +V VT G+ SWG GRLGHG +S+I
Sbjct: 285 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 335
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-----ARRP 281
P+LI L +++ A G HS + +G +Y +G D + GN +R
Sbjct: 336 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 393
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + + CG YHT V+TS G+L+T+G G LG G
Sbjct: 394 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHG 435
>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
Length = 1609
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 146/293 (49%), Gaps = 31/293 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + R SA + +K LA H + LTE G V++ G D+
Sbjct: 805 GEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDY 864
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ++ G+ HS+ +T+DG+L+ +G G+LG G
Sbjct: 865 GKLG-HGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGS 923
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
K IP +V L Q A G +V V+ V + G G G+LG G S+
Sbjct: 924 TTNK--KIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSA-- 979
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ +P I+ L V +K + G +A + +G++++FG D+M GN
Sbjct: 980 -------KTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQ---DRMC---GNCE 1026
Query: 279 RR------PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R P +++ L ++ G HT LTS G +YTWGSN +G LG+G
Sbjct: 1027 TRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLG 1079
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 123/248 (49%), Gaps = 16/248 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + +ACG H+ +T G ++ G D+G+
Sbjct: 859 WGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGR 918
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMW--GKNSNGQLGLGK 159
LG + P R+ L+ ++ Q++ G +H+ ++ D L +W G G+LG+G
Sbjct: 919 LGHGSTTNKKI-PERVMALENYIIGQVACGLNHTVIVSQDN-LTVWACGDGDYGKLGIGG 976
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+AK PTK+E LS + K+ + G + + A+T GK+ + G R+ E+
Sbjct: 977 TSAKT--SPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMF---GQDRMCGNCET---- 1027
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
R++ + P+++ L + + G H+ + G VY +G ++ NH +
Sbjct: 1028 --RTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQ 1085
Query: 280 RPSLISKL 287
P+L+ L
Sbjct: 1086 EPTLVESL 1093
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 24/216 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
+G GDYGRLG GS ++ P A E + + +ACG HT+ +++ V+A G D+G
Sbjct: 911 FGYGDYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYG 970
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI ++ +E L G+KK IS G ++A+T DG+L+M+G++
Sbjct: 971 KLGIGGTSAKTSPTKIEVLSRVGIKK----ISCGAQFTAALTWDGKLFMFGQDR----MC 1022
Query: 158 GKKAAKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G + P P V LS ++G E ++A+T G V +WG+ G+LG G +
Sbjct: 1023 GNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTN 1082
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ P L++ L G ++ +AG HSA
Sbjct: 1083 HV---------QEPTLVESLSGKNIRQISAGRTHSA 1109
>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 569
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 134/286 (46%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG G+ + R P+ + + A A G AH+L +T G V A G N G
Sbjct: 67 WGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVG 126
Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG I S P+ + V ++ G++HS A+T G ++ WG NS GQLG G +
Sbjct: 127 QLGDGTTINRS-TPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR 185
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V SG A G S+A+T G V +WG +G+LG G
Sbjct: 186 TNRSTPV--AVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTR------ 237
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T+ TP ++ G V A G HS + G +G+ V + L N R
Sbjct: 238 ---TNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQ-LGDGSNINRD 293
Query: 281 PSLISKLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
S+ +LP V V GG H+ LTS G + +WGSN G LG G
Sbjct: 294 ASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDG 339
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 119/266 (44%), Gaps = 23/266 (8%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
V SA +H+ A T+ + V A G N +GQLG Y P+ + GL K
Sbjct: 39 VSSAIAQHTSVAQHRPSPTTV---ASDAVLAWGDNYYGQLGDGTTNNYRTVPIPV-GLPK 94
Query: 124 --EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
EV + G HS A+T G + WG+N+ GQLG G + P+ V G
Sbjct: 95 GTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPV--DVRLPPGTTVTA 152
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A GF S+A+T G V +WG +G+LG G T+ TP + G +
Sbjct: 153 VAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR---------TNRSTPVAVSFPSGTVIT 203
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-LISKLPYSEEVVC---GG 297
AAG +HS + G V+ +GD + ++ +G R + ++ LP V GG
Sbjct: 204 AVAAGGMHSLALTSAGTVFAWGDNSTGQL--GDGTRTNRSTPVVVGLPVGTIVTAIAGGG 261
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
H+ +TS G WG+N G LG G
Sbjct: 262 SHSLAVTSAGNARAWGNNFVGQLGDG 287
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 118/284 (41%), Gaps = 15/284 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV ++ A+A G H+L LT G V+A G N GQ
Sbjct: 120 WGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQ 179
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S P+ +S V+ ++ G HS A+T G ++ WG NS GQLG G +
Sbjct: 180 LGDGTRTNRS-TPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRT 238
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V G A G S+AVT G +WG G+LG G
Sbjct: 239 NRSTPV--VVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSN-----IN 291
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R S + ++ G V A G HS + G V +G ++ P
Sbjct: 292 RDASVH----VRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTP 347
Query: 282 SLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S P V G LTS G + WG N G LG G
Sbjct: 348 GSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGDG 391
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 103/246 (41%), Gaps = 12/246 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +R PV S + A+A GG H+L LT G V+A G N GQ
Sbjct: 172 WGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQ 231
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S + + V I+ G HS A+T G WG N GQLG G
Sbjct: 232 LGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNIN 291
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ + V G A G S+A+T G VLSWG+ G+LG G
Sbjct: 292 RDASV--HVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTAR------- 342
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TP + GV + AAG L + G V +G V + L RR
Sbjct: 343 --DRNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQ-LGDGTTTVRRTP 399
Query: 283 LISKLP 288
+ + LP
Sbjct: 400 VAASLP 405
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WGN G+LG GS +R V ++ A+A G H+L LT G V + G N+
Sbjct: 273 ARAWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNN 332
Query: 100 FGQLGI----SENI--GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
+GQLG N SL P + ++ G A+T G + WG N G
Sbjct: 333 WGQLGDGTARDRNTPGSVSLPP------GVTITAVAAGDLFGLALTSAGTVLAWGGNIVG 386
Query: 154 QLGLGKKAAKVIPI 167
QLG G + P+
Sbjct: 387 QLGDGTTTVRRTPV 400
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 EDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
Length = 1075
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 144/301 (47%), Gaps = 36/301 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + +P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 509 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 555
Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ Q GN HA + P+ + KL + EE+ CG YH VLTS E+YTWG NG LG
Sbjct: 556 PVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 615
Query: 323 G 323
G
Sbjct: 616 G 616
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 129/269 (47%), Gaps = 34/269 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-I 128
++ +ACGG H + +T+ G ++ G G+L G+ NI +P I L ++ +
Sbjct: 309 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELV 365
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS A+T+ G+LY WGK G LG G + + +P L GI A G
Sbjct: 366 ACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYH 424
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ ++G G G LGHG + S+ + PR + L+G++ AA G
Sbjct: 425 TAVVTSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVW 475
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
H+A + E +G+++ +GD DK GN + P+ ++ L P +
Sbjct: 476 HTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGNKEPKLVPTCVAALVEPNFCQ 533
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS G LG
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLG 562
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G+ E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 501 WGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S G + P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 561 LGNSHADGKT--PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDV 618
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ PT VE L K A G + AV + W +G
Sbjct: 619 DDRN--SPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASG 656
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + +V VT G+ SWG GRLGHG +S+I
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-----ARRP 281
P+LI L +++ A G HS + +G +Y +G D + GN +R
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 406
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + + CG YHT V+TS G+L+T+G G LG G
Sbjct: 407 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHG 448
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 17/271 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 57 GCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 116
Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N G+ + + + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A + P
Sbjct: 117 TNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ--P 174
Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
IP +V CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 175 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SGN 225
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--L 283
+ TP I L+G++V+ A G+ H+ + + G++Y +G + ++ ++ P+ +
Sbjct: 226 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVV 285
Query: 284 ISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G++Y WG
Sbjct: 286 VDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 316
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ TE V+ G+N G LG + + ++E
Sbjct: 11 KWPIFSLCSQEELKLIRQACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGD-MQSTIE 69
Query: 115 PLRISGL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE+Y WG N+ QLG G +P
Sbjct: 70 PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTN 129
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
++ + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 130 LVNKKVI-EVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 179
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + ENG VY++G ++ + P I+ L
Sbjct: 180 TSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 239
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 240 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 273
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 209 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 268
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K V++I+ + H S+A T G++YMWG+ GQ
Sbjct: 269 QLGTGNKSNQSY-PTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 321
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 322 --SVILPHLTHFACTDDVF 338
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 EDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
Length = 1719
Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats.
Identities = 101/338 (29%), Positives = 148/338 (43%), Gaps = 68/338 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLK--ALACGGAHTLFLTETGCVYATGLND 99
WG+G G+LG G+LES P + FE K SL+ ++A GG HT+ LT G VY+ G ND
Sbjct: 185 WGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGGKHTVALTVCGNVYSFGGND 244
Query: 100 FGQLGI-----------------------------------SENIGYSLEPLRISGLKKE 124
QLG+ S + ++ + + S
Sbjct: 245 SCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTSTLFNKQQQQSSNKIDR 304
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++++S + S+AI+ G LY WG+ NG+LG G + P +V L G +L
Sbjct: 305 IIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQ--STPKQVMSLHGHTIVDMSL 362
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S+A+T G+V SWG G +G+LGHG +S + TP+ I+ + +K+ +
Sbjct: 363 GGGHSMALTKRGEVFSWGRGENGQLGHGTFTS--------QQMTPKQIQAFQNKTIKVIS 414
Query: 245 AGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE-------- 291
AG HS ID NG ++ +G V L G+ P LI L S
Sbjct: 415 AGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGD-INSPVLIKSLNNSNGSNNSNSS 473
Query: 292 ------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V G H T G+LY+WG LG+
Sbjct: 474 AGERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLGLA 511
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 15/191 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG G + P + H++ ++ GG H++ LT+ G V++ G + GQ
Sbjct: 327 WGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQ 386
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + P +I + + ++ IS G +HS AI +G ++ WG+ G LG+
Sbjct: 387 LGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSL 446
Query: 162 AKVIPIPTKV--------------ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
+ I + V +G + GF+ +VA T G + SWG G
Sbjct: 447 DSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCGSGN 506
Query: 208 RLGHGQESSIL 218
RLG E + L
Sbjct: 507 RLGLANEENQL 517
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 75/296 (25%), Positives = 124/296 (41%), Gaps = 52/296 (17%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE--- 124
F K + ++ G HT +T+ G +Y G G+LG YS EP + + +
Sbjct: 158 FLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYS-EPRLVEFFETKPSL 216
Query: 125 -VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV------------ 171
VV ++ G H+ A+TV G +Y +G N + QLGLG ++ P V
Sbjct: 217 RVVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSN 276
Query: 172 --------ECLSGIFTKQA-------------ALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
S +F KQ + +S A++ G + +WG G +GRLG
Sbjct: 277 SSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLG 336
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG S + TP+ + L G + + G HS + + G V+ +G R +
Sbjct: 337 HGD---------SLMQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWG-RGENGQ 386
Query: 271 LFQEGNHARR--PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
L +++ P I + + GGYH+ + + G ++ WG + G LG+
Sbjct: 387 LGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGV 442
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 17/141 (12%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+ G+LG G+ S+ P AF+ ++K ++ GG H++ + G ++A G D+G
Sbjct: 379 WGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYG 438
Query: 102 QLGIS---ENIGYSLEPLRISGLK-------------KEVVQISTGYHHSSAITVDGELY 145
LG+S +++G P+ I L + + +S+G+ H+ A T +G+LY
Sbjct: 439 VLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLY 498
Query: 146 MWGKNSNGQLGLGKKAAKVIP 166
WG S +LGL + ++IP
Sbjct: 499 SWGCGSGNRLGLANEENQLIP 519
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 70/244 (28%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLS 175
RI LK++VV ISTG H+S IT G LY WG G+LG G + P + E
Sbjct: 155 RIDFLKEKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKP 214
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI--- 232
+ A G + +VA+T G V S+G S +LG LG + S+ TP+L+
Sbjct: 215 SLRVVSVANGGKHTVALTVCGNVYSFGGNDSCQLG-------LGNISSSYYSTPQLVTFQ 267
Query: 233 -------------------------KELEGVKVKI-----AAAGFLHSACIDENGRVYIF 262
K+ + KI + SA I + G +Y +
Sbjct: 268 SPQSLSNSNSSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTW 327
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGC 319
G ++ + P + L + +V GG H+ LT GE+++WG ENG
Sbjct: 328 GRGDNGRLGHGDSLMQSTPKQVMSL-HGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQ 386
Query: 320 LGIG 323
LG G
Sbjct: 387 LGHG 390
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 17/271 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 52 GCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 111
Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N G+ + + + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A + P
Sbjct: 112 TNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ--P 169
Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
IP +V CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 170 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SGN 220
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--L 283
+ TP I L+G++V+ A G+ H+ + + G++Y +G + ++ ++ P+ +
Sbjct: 221 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVV 280
Query: 284 ISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G++Y WG
Sbjct: 281 VDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 116/250 (46%), Gaps = 16/250 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSS 136
G L+ TE V+ G+N G LG + + ++EP R+ L K++ +S G H
Sbjct: 30 AGNEVLYATENDEVFVLGMNCSGCLGTGD-MQSTIEPRRLDSLCGKKIACLSYGSGPHVV 88
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE+Y WG N+ QLG G +P ++ + A G S+ +T G
Sbjct: 89 LATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVI-EVACGSHHSMVLTSDG 147
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + L+ V A G + S + E
Sbjct: 148 EVYTWGYNNSGQVGSGS---------TANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVE 198
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
NG VY++G ++ + P I+ L + V CG HT VLT G++Y WG
Sbjct: 199 NGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 258
Query: 314 SNENGCLGIG 323
+N G LG G
Sbjct: 259 ANSYGQLGTG 268
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K V++I+ + H S+A T G++YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ P T C +F
Sbjct: 317 --SVTFPHLTHFACTDDVF 333
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 141/283 (49%), Gaps = 26/283 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +R PV + A+A G AH+L + G V+A G N GQ
Sbjct: 172 WGSNASGQLGEGTTSNRPEPVQVQGLSG--VVAVAAGSAHSLAVRSDGTVWAWGANASGQ 229
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL VV ++ G+HHS A+ DG ++ WG+N + QLG K +
Sbjct: 230 LGDGTTTDR-LVPVQVQGLSG-VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLG---KGS 284
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P +V+ LS + A G S+AV G V + G+ +G+LG G
Sbjct: 285 MRLLVPAQVQGLSAVVA--VAAGDTHSLAVGSDGTVWAVGSNNNGQLGDG---------- 332
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
T+ Y + L GV V +AA + HS + +G V+ +G + ++ +G R
Sbjct: 333 -TTTYRLVPVPVLSGV-VSVAANDY-HSLAVRSDGTVWAWGYNSTGQL--GDGTTTTRLV 387
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S L VV GGYH+ + S G + WGSN G LG G
Sbjct: 388 PVQVSGLSEVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDG 430
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 130/284 (45%), Gaps = 28/284 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+ G G+ +R PV + A+A G H+L + G +A G N GQ
Sbjct: 122 WGSNSSGQRGDGTTNNRALPVQAQGLSG--VMAVAAGDNHSLAVRSDGSAWAWGSNASGQ 179
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG EP+++ GL VV ++ G HS A+ DG ++ WG N++GQLG G
Sbjct: 180 LG-EGTTSNRPEPVQVQGLSG-VVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTD 237
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+ +V+ LSG+ A G S+AV G V WG S +LG G
Sbjct: 238 RLVPV--QVQGLSGVVA--VAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSM-------- 285
Query: 223 STSEYTPRLI--KELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
RL+ +++G+ +A AAG HS + +G V+ G + +G
Sbjct: 286 -------RLLVPAQVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSN--NNGQLGDGTTTY 336
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R + L V YH+ + S G ++ WG N G LG G
Sbjct: 337 RLVPVPVLSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDG 380
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 132/283 (46%), Gaps = 21/283 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ PV + A+ G +H+L + G V+A G N GQ
Sbjct: 20 WGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHSLAVRSDGTVWAWGSNASGQ 79
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S P+++ GL V+ ++ G H A+ DG ++ WG NS+GQ G G
Sbjct: 80 LGDETTISRS-TPVQVLGLSG-VLFVAAGSSHVLALRYDGTVWAWGSNSSGQRGDGTTNN 137
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ + + LSG+ A G S+AV G +WG+ SG+LG G S
Sbjct: 138 RALPV--QAQGLSGVMA--VAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTS------- 186
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+ P ++ L GV AAG HS + +G V+ +G A ++ +G R
Sbjct: 187 --NRPEPVQVQGLSGVVA--VAAGSAHSLAVRSDGTVWAWGANASGQL--GDGTTTDRLV 240
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V G +H+ + + G ++ WG N++ LG G
Sbjct: 241 PVQVQGLSGVVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKG 283
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 21/251 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHH 134
+A G +H+L L G V+A G N GQLG + P+++ GL EVV + G H
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLS-EVVAVDAGSSH 59
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ DG ++ WG N++GQLG ++ P+ +V LSG+ A G +A+
Sbjct: 60 SLAVRSDGTVWAWGSNASGQLGDETTISRSTPV--QVLGLSGVLF--VAAGSSHVLALRY 115
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG+ SG+ G G + + P + L GV AAG HS +
Sbjct: 116 DGTVWAWGSNSSGQRGDG---------TTNNRALPVQAQGLSGVMA--VAAGDNHSLAVR 164
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPS--LISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+G + +G A ++ EG + RP + L V G H+ + S G ++ W
Sbjct: 165 SDGSAWAWGSNASGQL--GEGTTSNRPEPVQVQGLSGVVAVAAGSAHSLAVRSDGTVWAW 222
Query: 313 GSNENGCLGIG 323
G+N +G LG G
Sbjct: 223 GANASGQLGDG 233
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 109/222 (49%), Gaps = 24/222 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
WG D +LG GS+ R +V + + S + A+A G H+L + G V+A G N+ G
Sbjct: 272 WGRNDSNQLGKGSM----RLLVPAQVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNG 327
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG Y L P+ + VV ++ +HS A+ DG ++ WG NS GQLG G
Sbjct: 328 QLGDGTTT-YRLVPVPV---LSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTT 383
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+++P+ +V LS + + A G S+AV G WG+ G+LG G
Sbjct: 384 TRLVPV--QVSGLSEVVSVVA--GGYHSLAVRSDGSAWDWGSNAYGQLGDGS-------- 431
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+T P +++L GV A+G HS + +G V+ +G
Sbjct: 432 -TTYLPVPVRVQQLSGVGA--VASGSSHSLALRSDGTVWTWG 470
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ + G+LG G+ R PV + ++A H+L + G V+A G N GQL
Sbjct: 322 GSNNNGQLGDGTTTYRLVPVPV----LSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQL 377
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G L P+++SGL EVV + G +HS A+ DG + WG N+ GQLG G
Sbjct: 378 GDGTTT-TRLVPVQVSGLS-EVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGST--T 433
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P+P +V+ LSG+ A G S+A+ G V +WG G+LG+G + +RS
Sbjct: 434 YLPVPVRVQQLSGV--GAVASGSSHSLALRSDGTVWTWGYNSFGQLGNGPPLNTATVIRS 491
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV S + + ++ GG H+L + G + G N +GQ
Sbjct: 369 WGYNSTGQLGDGTTTTRLVPVQVSGLSE--VVSVVAGGYHSLAVRSDGSAWDWGSNAYGQ 426
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG Y P+R+ L V +++G HS A+ DG ++ WG NS GQLG G
Sbjct: 427 LGDGSTT-YLPVPVRVQQLSG-VGAVASGSSHSLALRSDGTVWTWGYNSFGQLGNGPP 482
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 148/333 (44%), Gaps = 60/333 (18%)
Query: 43 WGNGDYGRLGL-GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG RLG G+ + +P + FE +++ +ACGG HTL L E GC+++ G N +G
Sbjct: 15 WGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQYG 74
Query: 102 QLGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + L+ R IS L +++ ++ G +HS+A+ V+G ++ WG NG+LG +
Sbjct: 75 QLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDE 134
Query: 161 AAKVIP-----IPT--KVEC---------LSGIFT------------------------- 179
+ IP +P K+ C G++T
Sbjct: 135 QTRTIPCRITHLPRAHKIFCGYHITAAITDDGLYTWGWGEHGQLGQGSLEDSYGPKKVIF 194
Query: 180 -------KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
Q A G + T G V +WG+ G+LG G+ + I +P L+
Sbjct: 195 DDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYS--------SPVLL 246
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYS 290
L G+ V AAG HSA + G ++ +G A + + N P L+ L +
Sbjct: 247 TSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFI 306
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG T L+ ++Y +G+N G LG G
Sbjct: 307 LKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDG 339
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
Query: 26 ICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTL 84
C I++ + WG G++G+LG GSLE + P V ++ LACG H L
Sbjct: 153 FCGYHITAAITDDGLYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCL 212
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGE 143
TE+G VY G N+FGQLGI P+ ++ L +V ++ G HS+A+T G
Sbjct: 213 VRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGS 272
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L+ WG + GQ G G +P VE L G+F + G +VA++ + +G
Sbjct: 273 LFTWGCGAEGQCGHGD--YNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGN 330
Query: 204 GGSGRLGHGQESS 216
G+LG G +SS
Sbjct: 331 NSYGQLGDGSKSS 343
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 144 LYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
LY WG+ N +LG G + P KV +Q A G ++ + G + S+G
Sbjct: 12 LYTWGRAKNYRLGRRGTRDDSCQPELIKV--FENCAIQQVACGGGHTLVLLEDGCLHSFG 69
Query: 203 AGGSGRLGHGQE-SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G+LG+G + S L R S + +LI A G HSA +D NG V+
Sbjct: 70 YNQYGQLGNGTKVDSPLDASRDISSLSNKLIA---------VACGRYHSAALDVNGTVFT 120
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+G ++ + P I+ LP + ++ CG + T +T G LYTWG E+G LG
Sbjct: 121 WGGGKNGRLGHNDEQTRTIPCRITHLPRAHKIFCGYHITAAITDDG-LYTWGWGEHGQLG 179
Query: 322 IG 323
G
Sbjct: 180 QG 181
>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
[Gallus gallus]
Length = 1212
Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 141/296 (47%), Gaps = 37/296 (12%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLGS + +P A + K CG HTL TE G VYA G N G
Sbjct: 62 MFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 121
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L + + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL
Sbjct: 122 QLGLGDTEERTTFHLISFFTN--QHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLA 179
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K +P V G + G+ S +TG G++ ++G +G+LG E
Sbjct: 180 DKTCVSVPCQVDV----GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ--- 232
Query: 219 GFLRSTSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L+++ P L I E KV A G H+ + E G VY FG L Q G
Sbjct: 233 --LKNSRVPQPVLGIME----KVNKVACGGEHTVVLTETG-VYTFG-------LGQYGQL 278
Query: 278 ARRPSLI-SKLPYS---------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + +P S V CG HT V+ G ++T+G +G LG+G
Sbjct: 279 GHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGKLGLG 334
Score = 117 bits (294), Expect = 6e-24, Method: Composition-based stats.
Identities = 104/293 (35%), Positives = 151/293 (51%), Gaps = 24/293 (8%)
Query: 22 SKLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALAC 78
+KL +C R + T + A GN + G+LGLG E R + S F +H +K LA
Sbjct: 93 TKLAVCGRNHTLVYTEKGNVYAAGGNSE-GQLGLGDTEERTTFHLISFFTNQHKIKQLAA 151
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
G + +TE G ++ G N GQ+G+++ S+ P ++ + K V IS GY+HS+ I
Sbjct: 152 GSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSV-PCQVD-VGKPVSSISCGYYHSAFI 209
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGG 196
T DGELY +G+ NG+LGL + K +P V GI K + A G E +V +T G
Sbjct: 210 TGDGELYTFGEPENGKLGLLPEQLKNSRVPQPV---LGIMEKVNKVACGGEHTVVLTETG 266
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V ++G G G+LGHG L TS P+ +K L K+ G H+A I EN
Sbjct: 267 -VYTFGLGQYGQLGHGT------LLFKTS--VPKSVKHLRSHKIHNVTCGESHTAVIAEN 317
Query: 257 GRVYIFGDRAVDKMLFQEGNHARR--PSLISK-LPYSEEVV-CGGYHTCVLTS 305
G ++ FGD K+ E N A + P+L S L ++ +V CGG H V +
Sbjct: 318 GLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVFAT 370
Score = 99.8 bits (247), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + + V IS G H++ +T +G+LYM+G N GQLGLG
Sbjct: 21 FGKSNFAENI-----PSKFWFKNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGS 75
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + PT V+ L TK A G ++ T G V + G G+LG G
Sbjct: 76 K--NTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEE--- 130
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
R+T + K+K AAG SA + E+G+++++GD + ++ +
Sbjct: 131 --RTTFHLISFFTNQH---KIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVS 185
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P + + CG YH+ +T GELYT+G ENG LG+
Sbjct: 186 VPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGL 228
Score = 97.8 bits (242), Expect = 5e-18, Method: Composition-based stats.
Identities = 82/257 (31%), Positives = 123/257 (47%), Gaps = 28/257 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
++CG HT +T G +Y G ND+GQLG+ +P + LK E +++ G +H
Sbjct: 44 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSK-NTVRKPTCVKALKPEKTKLAVCGRNH 102
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G +Y G NS GQLGLG + T +S FT KQ A G S
Sbjct: 103 TLVYTEKGNVYAAGGNSEGQLGLGDTEER-----TTFHLIS-FFTNQHKIKQLAAGSYTS 156
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
AVT G++ WG G++G ++ + P + G V + G+ H
Sbjct: 157 AAVTEDGQLFVWGDNSEGQIGLADKTCV---------SVPCQVD--VGKPVSSISCGYYH 205
Query: 250 SACIDENGRVYIFGDRAVDK--MLFQEGNHARRPS-LISKLPYSEEVVCGGYHTCVLTSG 306
SA I +G +Y FG+ K +L ++ ++R P ++ + +V CGG HT VLT
Sbjct: 206 SAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTET 265
Query: 307 GELYTWGSNENGCLGIG 323
G +YT+G + G LG G
Sbjct: 266 G-VYTFGLGQYGQLGHG 281
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G E+R++P + S+ H + A+A GG H+L LT+ G +++ G + GQ
Sbjct: 261 WGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQ 320
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P ++ +++ IS G +HS A DG +Y WG + G LG G
Sbjct: 321 LGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDS 380
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
I IP ++ GI K + GF+ +VA+T + SWG G GRLG E +
Sbjct: 381 DDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKN 436
Score = 117 bits (294), Expect = 6e-24, Method: Composition-based stats.
Identities = 90/292 (30%), Positives = 137/292 (46%), Gaps = 27/292 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG--CVYATGLNDF 100
WG G YGRLG G ES P A +K + CGG T+ L+ T +Y G N+F
Sbjct: 153 WGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEF 212
Query: 101 GQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG ++ E + + G K+ +V + G ++ I G L+ WG+ +G+LG
Sbjct: 213 GQLGRGDCGDDFTCLPESVAVPGAKR-LVALDAGASRAAVIDSSGALFTWGRGDHGRLGH 271
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + PT V L G ALG S+A+T G++ SWG G +G+LGHG S
Sbjct: 272 GDTENRY--QPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQS- 328
Query: 218 LGFLRSTSEYTPRLIKELEGVK--VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ P+ ++ + + I+A G+ HS ++G VY +G D + G
Sbjct: 329 -------QQLAPKQLQFFVDMPKIIGISAGGY-HSVAQLDDGSVYAWG--MSDYGILGTG 378
Query: 276 N------HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + + L+ + + + CG HT LTS +Y+WG G LG
Sbjct: 379 DSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLG 430
Score = 84.0 bits (206), Expect = 9e-14, Method: Composition-based stats.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSS 136
G AH ++++G ++ G +G+LG E+I + + ++ + + V +
Sbjct: 137 GAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRSTIAL 196
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
+ T LY WG N GQLG G +P V G ++ + G
Sbjct: 197 SHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSG 256
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+ +WG G GRLGHG + + Y P L+ L G V A G HS + +
Sbjct: 257 ALFTWGRGDHGRLGHGD---------TENRYQPTLVSSLYGHVVVAVALGGGHSLALTKA 307
Query: 257 GRVYIFGDRAVDKML----FQEGNHA-RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
G ++ +G R + L +Q A ++ +P + GGYH+ G +Y
Sbjct: 308 GELFSWG-RGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYA 366
Query: 312 WGSNENGCLGIG 323
WG ++ G LG G
Sbjct: 367 WGMSDYGILGTG 378
Score = 83.2 bits (204), Expect = 2e-13, Method: Composition-based stats.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ ++ ++ G H + I+ G+L+ WG+ G+LG G + + I P +V L+ I K
Sbjct: 128 EERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEES--ISTPKQVVALANIPMKY 185
Query: 182 AALGFEQSVAV--TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
G ++A+ T G + +WG G+LG G L + + G K
Sbjct: 186 VFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVA--------VPGAK 237
Query: 240 VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--- 295
+A AG +A ID +G ++ +G ++ + + +P+L+S L Y VV
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSL-YGHVVVAVAL 296
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
GG H+ LT GEL++WG ENG LG G
Sbjct: 297 GGGHSLALTKAGELFSWGRGENGQLGHG 324
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+LG GS +S+ P F + + ++ GG H++ + G VYA G++D+
Sbjct: 313 WGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDY 372
Query: 101 GQLGISENIGYSLE-PLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G LG ++ ++ P RI G++ + IS G+ H+ A+T D +Y WG G+LG
Sbjct: 373 GILGTGDSDDGAINIPQRILMPRGIRFKT--ISCGFQHTVALTSDNTIYSWGCGLGGRLG 430
Query: 157 LGKKAAKVIPIPTKV 171
+ + PI +
Sbjct: 431 TFNEKNQCAPIACNI 445
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSYGQLG 275
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L S G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLG 172
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G +GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|391344902|ref|XP_003746733.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 and BTB domain-containing
protein 1-like [Metaseiulus occidentalis]
Length = 550
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 17/224 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ Y ++G PV+ F++ + +ACGG H++ T +G VY G N+ GQ
Sbjct: 121 WGHNGYSQVGNDQNSQANSPVL--VFDRQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQ 178
Query: 103 LGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+S ++ + P ++ G E+ IS G++ ++A+ GE+Y+WG N NGQLGLG
Sbjct: 179 LGLSASVNHQ-SPRKVGGAIAEMKCTGISCGHNFTTAVFDTGEVYVWGSNGNGQLGLGSL 237
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P P K+E L +F K+ A GF ++A+T G V WGA G+LG +
Sbjct: 238 TNQ--PFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALGQLGTENK------ 289
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
T++ P L+K + G ++AA + SA + E +V ++G
Sbjct: 290 ---TNQSIPVLMKTIHGRINEVAATQYNQTSAAMTETSKVLMWG 330
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 135/279 (48%), Gaps = 26/279 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G+ G LG+G S P K +++ ACG G H L LT G VY G N + Q
Sbjct: 69 GSNAAGCLGIGDTRSCLSPTKVEGLSKKGVQSFACGTGPHVLALTARGEVYGWGHNGYSQ 128
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G +N + P+ + ++ V QI+ G +HS TV G +Y WG+N+ GQLGL
Sbjct: 129 VGNDQN-SQANSPVLVFD-RQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQLGLSASVN 186
Query: 163 KVIPIPT-----KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P +++C +GI + G + AV G+V WG+ G+G+LG
Sbjct: 187 HQSPRKVGGAIAEMKC-TGI-----SCGHNFTTAVFDTGEVYVWGSNGNGQLG------- 233
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
LG L T++ P I++L+ V +K A GF H+ + + G VY++G A+ ++ + +
Sbjct: 234 LGSL--TNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALGQLGTENKTN 291
Query: 278 ARRPSLISKLP-YSEEVVCGGYH--TCVLTSGGELYTWG 313
P L+ + EV Y+ + +T ++ WG
Sbjct: 292 QSIPVLMKTIHGRINEVAATQYNQTSAAMTETSKVLMWG 330
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 109/248 (43%), Gaps = 29/248 (11%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITV 140
L +TE V+A G N G LGI + L P ++ GL K+ VQ TG H A+T
Sbjct: 57 LLVTEEDEVWAMGSNAAGCLGIGDTRS-CLSPTKVEGLSKKGVQSFACGTG-PHVLALTA 114
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA----ALGFEQSVAVTGGG 196
GE+Y WG N Q+G + + P+ +F +Q A G SV T G
Sbjct: 115 RGEVYGWGHNGYSQVGNDQNSQANSPVL--------VFDRQPVAQIACGGYHSVIRTVSG 166
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDE 255
V +WG G+LG S + +PR + + +K + G + + +
Sbjct: 167 GVYTWGQNNCGQLG---------LSASVNHQSPRKVGGAIAEMKCTGISCGHNFTTAVFD 217
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
G VY++G ++ + P I +L + ++V CG HT LT G +Y WG
Sbjct: 218 TGEVYVWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWG 277
Query: 314 SNENGCLG 321
+N G LG
Sbjct: 278 ANALGQLG 285
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G+LGLGSL ++ PV + +K +ACG +HTL LT+ G VY G N G
Sbjct: 223 VWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALG 282
Query: 102 QLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLG 158
QLG S+ L I G EV +T Y+ +S A+T ++ MW GL
Sbjct: 283 QLGTENKTNQSIPVLMKTIHGRINEVA--ATQYNQTSAAMTETSKVLMW--------GLC 332
Query: 159 KKAAKVIPIPTKVECLSGIF 178
+ +P T + + +F
Sbjct: 333 RGQHVTVPTETPFDSVHDVF 352
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF-EQSVAVTGGG 196
+T + E++ G N+ G LG+G + + P TKVE LS + A G +A+T G
Sbjct: 59 VTEEDEVWAMGSNAAGCLGIGDTRSCLSP--TKVEGLSKKGVQSFACGTGPHVLALTARG 116
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V WG G ++G+ Q S +P L+ + + V +IA G+ HS +
Sbjct: 117 EVYGWGHNGYSQVGNDQNSQ---------ANSPVLVFDRQPV-AQIACGGY-HSVIRTVS 165
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPS----LISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
G VY +G ++ + + P I+++ + + CG T + GE+Y W
Sbjct: 166 GGVYTWGQNNCGQLGLSASVNHQSPRKVGGAIAEMKCTG-ISCGHNFTTAVFDTGEVYVW 224
Query: 313 GSNENGCLGIG 323
GSN NG LG+G
Sbjct: 225 GSNGNGQLGLG 235
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ VT +V + G+ +G LG G S L +P ++ L V+ A G
Sbjct: 55 EALLVTEEDEVWAMGSNAAGCLGIGDTRSCL---------SPTKVEGLSKKGVQSFACGT 105
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
H + G VY +G ++ + + A P L+ ++ CGGYH+ + T
Sbjct: 106 GPHVLALTARGEVYGWGHNGYSQVGNDQNSQANSPVLVFDRQPVAQIACGGYHSVIRTVS 165
Query: 307 GELYTWGSNENGCLGI 322
G +YTWG N G LG+
Sbjct: 166 GGVYTWGQNNCGQLGL 181
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 135/281 (48%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R PV + A+A G AH++ L + G V A G N +GQ
Sbjct: 584 WGANSYGQLGDGTTTHRLSPVQVPGLT--GVSAMAAGDAHSVALLQDGTVSAWGRNSWGQ 641
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL V ++ G H+ A+ DG ++ WG N GQLG G
Sbjct: 642 LG-DGTTAARLTPVQVHGLTG-VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTR 699
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V+ L+ + A G+ +VAV G V +WG G+LG G
Sbjct: 700 RLAPV--QVQGLTDV--TAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGS--------- 746
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
ST+ TP ++EL GV AAG+ H+ + ++G V+ +G+ + ++ P
Sbjct: 747 STARSTPVQVQELTGVSAL--AAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPV 804
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + G +HT ++ G + WG N G +G G
Sbjct: 805 WVEGLTGVSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDG 845
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 138/290 (47%), Gaps = 23/290 (7%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q A WGN +G+LG G+ R PV + A+A G HT + + G V+A
Sbjct: 24 QDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLT--GVTAVAAGRHHTFAVRQDGTVWAW 81
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GLN +GQLG + P+++ GL V I+ G H+ A++ DG ++ WG N GQL
Sbjct: 82 GLNVWGQLGDGTHT-ERHTPVQVPGLTG-VTAIAAGRRHTFAVSQDGTVWAWGDNDWGQL 139
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G +A + P+ ++ L+G+ A G + AV G V +WG G+LG G
Sbjct: 140 GDGTRADRHTPV--QLPELTGV--TAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTR- 194
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
T+ TP + L GV AAG H+ + ++G V+ +G+ A+ ++ +G
Sbjct: 195 --------TNRLTPVQVPGLTGVTA--IAAGDYHTLAVRQDGTVWAWGNNALGQL--GDG 242
Query: 276 NHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ R P + L + G HT + G ++ WG N G LG G
Sbjct: 243 TYTERLTPVQVPGLTGVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDG 292
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 133/283 (46%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ +R PV + A+A G HTL + + G V+A G N GQ
Sbjct: 181 WGDNAWGQLGDGTRTNRLTPVQVPGLT--GVTAIAAGDYHTLAVRQDGTVWAWGNNALGQ 238
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL V IS G H+ A+ DG ++ WG N GQLG G +
Sbjct: 239 LG-DGTYTERLTPVQVPGLTG-VTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTD 296
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V LSG+ A G + AV G V +WG G+LG G S L
Sbjct: 297 RLTPV--QVPGLSGV--TAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRL---- 348
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
TP + +L V AAG H+ + ++G V+ +GD ++ +G + R
Sbjct: 349 -----TPVQVPDL--TSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQL--GDGTYTDRLT 399
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + G HT + G ++ WG N G LG G
Sbjct: 400 PVQVPGLTGVTAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDG 442
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 21/251 (8%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
LQ + WG +G+LG G+ +R PV + A+A G HT+ L + G V+A
Sbjct: 626 LQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLT--GVTAVAAGSLHTVALRQDGTVWA 683
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G ND GQLG L P+++ GL +V I+ GY H+ A+ DG ++ WG N GQ
Sbjct: 684 WGYNDLGQLGDGTTT-RRLAPVQVQGLT-DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQ 741
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G A+ P+ +V+ L+G+ A G+ +VAV G V +WG +LG+G
Sbjct: 742 LGDGSSTARSTPV--QVQELTGV--SALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGS- 796
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
ST YTP ++ L GV AG H+A + G + +G ++ +
Sbjct: 797 --------STDRYTPVWVEGLTGVSALT--AGRFHTAAVSPEGFGWAWGRNNFGQV--GD 844
Query: 275 GNHARRPSLIS 285
G A RP +
Sbjct: 845 GTTADRPRPVD 855
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ R PV S+ A+A G HTL + + G V A G N +GQ
Sbjct: 431 WGDNVWGQLGDGTYTDRLTPVQVPDLT--SVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQ 488
Query: 103 LGISENIGYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + S P+ + GL V ++ G H+ A+ DG ++ WG N++GQLG G
Sbjct: 489 LGDGTS-SRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGAT 547
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP+ ++ L+G+ A G ++A G V SWGA G+LG G
Sbjct: 548 IDRRIPV--QIPGLAGV--TAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGT------- 596
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T +P + L GV AAG HS + ++G V +G + ++ +G A R
Sbjct: 597 --TTHRLSPVQVPGLTGVSAM--AAGDAHSVALLQDGTVSAWGRNSWGQL--GDGTTAAR 650
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V G HT L G ++ WG N+ G LG G
Sbjct: 651 LTPVQVHGLTGVTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDG 695
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 134/282 (47%), Gaps = 18/282 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV S+ A+A G HTL + + G V+A G N +GQ
Sbjct: 331 WGLNFWGQLGDGTRSDRLTPVQVPDLT--SVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQ 388
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL V I+ G H+ A+ DG ++ WG N GQLG G
Sbjct: 389 LG-DGTYTDRLTPVQVPGLTG-VTAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTD 446
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + A G ++AV G V +WG G+LG G S R
Sbjct: 447 RLTPV--QVPDLTSV--TAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGTSS------R 496
Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
S S P ++ L GV V A AAG H+ + ++G V+ +G A ++ R P
Sbjct: 497 SPS---PVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIP 553
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
I L + G HT G +++WG+N G LG G
Sbjct: 554 VQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDG 595
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 131/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + A+A G AHTL + G V++ G N +GQ
Sbjct: 534 WGLNASGQLGDGATIDRRIPVQIPGLA--GVTAIAAGSAHTLAAGQDGAVWSWGANSYGQ 591
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ GL V ++ G HS A+ DG + WG+NS GQLG G AA
Sbjct: 592 LGDGTTT-HRLSPVQVPGLTG-VSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAA 649
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+G+ A G +VA+ G V +WG G+LG G
Sbjct: 650 RLTPV--QVHGLTGV--TAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGT--------- 696
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P ++ L V AAG+ H+ + ++G V+ +G ++ P
Sbjct: 697 TTRRLAPVQVQGL--TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPV 754
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +L + G HT + G ++ WG+N LG G
Sbjct: 755 QVQELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNG 795
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 21/253 (8%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ A G HT+ + + G +A G N +GQLG L P+++ GL V ++ G
Sbjct: 9 VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTD-RLTPVQVPGLTG-VTAVAAGR 66
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
HH+ A+ DG ++ WG N GQLG G + P+ +V L+G+ A G + AV
Sbjct: 67 HHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPV--QVPGLTGV--TAIAAGRRHTFAV 122
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
+ G V +WG G+LG G + +TP + EL GV AAG H+
Sbjct: 123 SQDGTVWAWGDNDWGQLGDGTRA---------DRHTPVQLPELTGVTA--IAAGRRHTFA 171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
+ ++G V+ +GD A ++ +G R P + L + G YHT + G ++
Sbjct: 172 VRQDGTVWAWGDNAWGQL--GDGTRTNRLTPVQVPGLTGVTAIAAGDYHTLAVRQDGTVW 229
Query: 311 TWGSNENGCLGIG 323
WG+N G LG G
Sbjct: 230 AWGNNALGQLGDG 242
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG GS +R PV E + ALA G AHT+ + + G V+A G N Q
Sbjct: 734 WGYNLWGQLGDGSSTARSTPVQVQ--ELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQ 791
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+ + GL V ++ G H++A++ +G + WG+N+ GQ+G G A
Sbjct: 792 LGNGSSTD-RYTPVWVEGLTG-VSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTAD 849
Query: 163 KVIPIPTKVE 172
+ P+ ++
Sbjct: 850 RPRPVDVVIQ 859
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 150/316 (47%), Gaps = 21/316 (6%)
Query: 12 YYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
+++K D + G + R F+ +G+ DYG+LG G ++ P A +
Sbjct: 37 FWVKNDAVISVACGDQHSVFITASGRTFS--FGSNDYGQLGHGHTKALVNPRCVKALKDK 94
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQIST 130
+ACG +HTL T+ VYA G+N QLG+ + Y +P ++ L +V ++
Sbjct: 95 RAILVACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTA 154
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A++ G +Y+WG + +GQLGLG+K + +P+ K E + + G S
Sbjct: 155 GADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISA----GAYHSA 210
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
V G + ++G G+LG L P + +++G+ +A G H+
Sbjct: 211 YVNTDGVLYTFGETEHGKLGTN--------LAPKKCRKPSKVPDIQGLVTSVACGGS-HT 261
Query: 251 ACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSG 306
+ +GR Y FGD + ++ L Q HA RP LI ++P V G HT L+ G
Sbjct: 262 VALTCDGRAYSFGDGSQGQLGLGQRVTHAGRPHLI-QMPTGVKMARVSAGQSHTAFLSEG 320
Query: 307 GELYTWGSNENGCLGI 322
++YT G +G L +
Sbjct: 321 RQMYTCGEGRHGKLAL 336
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 124/252 (49%), Gaps = 16/252 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
++ACG H++F+T +G ++ G ND+GQLG + P + LK K + ++ G
Sbjct: 46 SVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKAL-VNPRCVKALKDKRAILVACGRS 104
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ T D ++Y +G NS QLG+ K +A P V L+G+ K G + S+A++
Sbjct: 105 HTLVATDDKKVYAFGINSEHQLGV-KSSAAYHADPQLVATLNGVQVKALTAGADHSLALS 163
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G V WG+ G+LG G R P +K EG + I+A + HSA +
Sbjct: 164 AKGIVYLWGSSEHGQLGLG---------RKKQRKLPVQLK-TEGKAIAISAGAY-HSAYV 212
Query: 254 DENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTSGGELYT 311
+ +G +Y FG+ K+ R+PS + + V CGG HT LT G Y+
Sbjct: 213 NTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYS 272
Query: 312 WGSNENGCLGIG 323
+G G LG+G
Sbjct: 273 FGDGSQGQLGLG 284
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 30/241 (12%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ E G V+ FG+ S+N+ P V+ ++ G HS IT G +
Sbjct: 15 IPELGAVFT-----FGKSKFSDNL-----PGTFWVKNDAVISVACGDQHSVFITASGRTF 64
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKVLSWG 202
+G N GQLG G A V P C+ + K+A A G ++ T KV ++G
Sbjct: 65 SFGSNDYGQLGHGHTKALVNP-----RCVKALKDKRAILVACGRSHTLVATDDKKVYAFG 119
Query: 203 AGGSGRLGHGQESSILGFLRSTSEY--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
+LG ++S++ Y P+L+ L GV+VK AG HS + G VY
Sbjct: 120 INSEHQLG----------VKSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGIVY 169
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++G ++ + P + + + G YH+ + + G LYT+G E+G L
Sbjct: 170 LWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAYHSAYVNTDGVLYTFGETEHGKL 229
Query: 321 G 321
G
Sbjct: 230 G 230
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 9/227 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG+ ++G+LGLG + R PV K A++ G H+ ++ G +Y G + G
Sbjct: 170 LWGSSEHGQLGLGRKKQRKLPVQLKTEGK--AIAISAGAYHSAYVNTDGVLYTFGETEHG 227
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + +P ++ ++ V ++ G H+ A+T DG Y +G S GQLGLG++
Sbjct: 228 KLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRV 287
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ +G+ + + G + ++ G ++ + G G G+L E +G
Sbjct: 288 THA-GRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKL--ALEDGEMG-- 342
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+++++P L+ L +V+ + G H+ + G G+R D
Sbjct: 343 --SNKFSPMLVDILSLFQVQQVSCGGCHTLVLVVPGLTDPQGNRMGD 387
>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1075
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 144/301 (47%), Gaps = 36/301 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + +P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 509 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 555
Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ Q GN HA + P+ + KL + EE+ CG YH VLTS E+YTWG NG LG
Sbjct: 556 PVYGQLGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 615
Query: 323 G 323
G
Sbjct: 616 G 616
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G+ E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 501 WGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 560
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S G P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 561 LGNSHADGKL--PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDV 618
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ PT VE L K A G + AV + W +G
Sbjct: 619 DDRN--SPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASG 656
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + +V VT G+ SWG GRLGHG +S+I
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-----ARRP 281
P+LI L +++ A G HS + +G +Y +G D + GN +R
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 406
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + + CG YHT V+TS G+L+T+G G LG G
Sbjct: 407 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHG 448
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 28 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 84
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 85 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 143
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 144 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 195
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 196 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 254
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 255 EEHTAVLTKSGGVFTFGAGSCGQLG 279
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 112 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 171
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 172 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 231
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 232 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 282
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 283 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 324
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 13 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 71
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 72 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 121
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 122 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 177
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 178 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 228
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 165 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 224
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 225 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 283
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 284 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 339
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 8 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 67
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 68 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 116
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 117 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 176
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 218 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 277
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 278 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 336
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 337 CNVKCPSPVK 346
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 144/287 (50%), Gaps = 22/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLGLG + P F+K +K ++ H+L LT TG VY+ G D+
Sbjct: 453 GKGSYGRLGLGDSNNCSVPKK-PLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDY 511
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + + L L +VV+ +S GY HS+A+T DGELY WG G+LG
Sbjct: 512 GKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGHDY 571
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
++K PTKV+ + + A G ++AV+ GK + S+G G +G+LGHG
Sbjct: 572 TSSK--NFPTKVQSIESV--GLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGD----- 622
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ + P++I+ L G+ ++ A G S + +G++Y +G A+ E A
Sbjct: 623 ----TNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILGCGSAEYT-A 677
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP L+ L ++ CG H LT E+Y WG+N G G G
Sbjct: 678 LRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQG 724
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 123/234 (52%), Gaps = 30/234 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P +V +K ++ G H+ +TE G +Y G +FG
Sbjct: 506 WGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFG 565
Query: 102 QLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLG 156
+LG S+N ++ + GL ++ G H+ A++ DG+ ++ +G NG+LG
Sbjct: 566 RLGHDYTSSKNFPTKVQSIESVGL------VACGGSHTLAVSQDGKTIWSFGGGENGKLG 619
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L+G++ ++ A G + S+AVT G++ +WG G +
Sbjct: 620 HGDTNRQL--KPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCG-----------A 666
Query: 217 ILGFLRSTSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
ILG ++EYT PRL+++L+ ++ A G H + VY +G+ A+
Sbjct: 667 ILGC--GSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAM 718
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 115/239 (48%), Gaps = 19/239 (7%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G VY G N QL +E + + S + + Q+ G + I DG + GK
Sbjct: 397 GEVYVWGSNCTHQL--AEGGQEKITTPKYSAVFTDCQQVEAGQFCTFLIYSDGTVGACGK 454
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGS 206
S G+LGLG +P K + K+ ++ G + S+A+T G+V SWG G
Sbjct: 455 GSYGRLGLGDSNNCSVP---KKPLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDY 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S ++ P+L+K L G VK +AG+ HSA + E+G +Y +GD
Sbjct: 512 GKLGHGTHS---------TQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDG 562
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIG 323
++ + P+ + + V CGG HT ++ G+ ++++G ENG LG G
Sbjct: 563 EFGRLGHDYTSSKNFPTKVQSIESVGLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHG 621
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG+G++GRLG S+ P + E S+ +ACGG+HTL +++ G +++ G + G
Sbjct: 559 WGDGEFGRLGHDYTSSKNFPTKVQSIE--SVGLVACGGSHTLAVSQDGKTIWSFGGGENG 616
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + L+P I L + +++ G S A+T G+LY WG LG G
Sbjct: 617 KLGHGDT-NRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWG--CGAILGCGSA 673
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L A G +A+T +V +WG G+ G G S +
Sbjct: 674 EYTALR-PRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPI-- 730
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
P+ + L+GV V +AG HS
Sbjct: 731 ------TRPKRVIGLDGVSVHQVSAGTSHS 754
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+ G+LG G + +P V A ++ +ACG +L +T +G +YA G
Sbjct: 610 FGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILG 669
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G +E +L P + L+ K +V I+ G H A+T + E+Y WG N+ GQ G G A
Sbjct: 670 CGSAEYT--ALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQG-HA 726
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
I P +V L G+ Q + G SVA T
Sbjct: 727 QSPITRPKRVIGLDGVSVHQVSAGTSHSVAWTA 759
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 9/259 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 46 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 105
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 106 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L ++ G
Sbjct: 166 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQL------ALSGNSA 218
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ + P
Sbjct: 219 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQ 278
Query: 283 LISKL-PYSEEVVCGGYHT 300
LI + + ++ CG YHT
Sbjct: 279 LIEGIGGHVSQIECGSYHT 297
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 125/248 (50%), Gaps = 19/248 (7%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 24 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 81
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S+A
Sbjct: 82 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 140
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG HS
Sbjct: 141 LSEDGQVFSWGSNRQGQLGLGNNL--------CSQASPQKVKSLEGIPLAQVAAGGTHSF 192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
+ G + +G+ ++ GN A+ +P I L V CG HT VLT
Sbjct: 193 ALSLMGTSFGWGNNRSGQLAL-SGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 251
Query: 306 GGELYTWG 313
G+++T+G
Sbjct: 252 DGQVFTFG 259
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
Query: 114 EPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+P R+ +G ++++ ++G HS + + +Y G NS GQLG +K+ + P ++
Sbjct: 11 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEPIQ 68
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + + G E SVAV G+V +WGAG G+LG G+ I + P I
Sbjct: 69 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEI--------SFMPTKI 120
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKL 287
L G+K+ + G HS + E+G+V+ +G ++ L + + + SL +
Sbjct: 121 NSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-EGI 179
Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P ++ V GG H+ L+ G + WG+N +G L +
Sbjct: 180 PLAQ-VAAGGTHSFALSLMGTSFGWGNNRSGQLAL 213
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 97 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 156
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 157 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 216
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + I P + L + + G+E + +T G+V ++G S +L H S G
Sbjct: 217 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG 276
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+LI+ + G +I + A + G+V G R
Sbjct: 277 ---------PQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG---------------R 312
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTS 305
PS S + +E C TC+L++
Sbjct: 313 GPSCTSNATH-QEAACSDV-TCLLSA 336
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P ++E +G+ +AA G S+ + +V S G G+LG S
Sbjct: 12 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 62
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
P I+ L V + + + G HS + GRV+ +G + ++ E + P+ I+
Sbjct: 63 RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 122
Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + +V CG YH+ L+ G++++WGSN G LG+G
Sbjct: 123 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLG 161
>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 907
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 139/299 (46%), Gaps = 32/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 N--VKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ N RP L+ SE V+ CG YH VLTS E++TWG NG LG G
Sbjct: 329 GQL--GNPNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHG 385
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E+R +P ++ + +ACG + T+ LT +G V+ G + +GQ
Sbjct: 271 WGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQ 330
Query: 103 LGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + G L +I+ + V+QI+ G +H + +T E++ WGK +NG+LG G
Sbjct: 331 LGNPNSDGRPCLVEDKIAS--EHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVE 388
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT VE L + A G + A+
Sbjct: 389 DR--KVPTTVEALRDRAVRHIACGANFTAAI 417
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG+++ + G H+A I G+++ FGD + + P + L
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHG 282
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 12/256 (4%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P AFE + ++CG H+L + G V+A G GQLGI E S P +I
Sbjct: 87 KPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKA 146
Query: 121 LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L +++Q+S GY+HS A++ DG+++ WGKNS+GQLGLGK+ P +V L GI
Sbjct: 147 LAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTS-PQRVRSLEGIPL 205
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G WG+ +G+L ++ G Y P + L+ +
Sbjct: 206 AQVAAGGAHSFALSLSGTSFGWGSNSAGQL------ALSGTKAPVQRYKPLSVGALKTLG 259
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YSEEVVCGGY 298
V + G H+A + +NG VY FG + ++ R P + ++ ++ CG Y
Sbjct: 260 VVYISCGSEHTAVLTQNGAVYTFGANSSGQL--GHSAEQRGPQCVERIDGLVSQIDCGSY 317
Query: 299 HTCV-LTSGGELYTWG 313
HT + + G++ ++G
Sbjct: 318 HTLAYVYTTGQVVSFG 333
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 30/237 (12%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--------CGGAHTLFLTE 88
R FA WG G G+LG+G + R +F +KALA CG H+L L+E
Sbjct: 117 RVFA--WGAGSEGQLGIGEFKER-------SFTPQKIKALAGIKIIQVSCGYYHSLALSE 167
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMW 147
G V++ G N GQLG+ + + P R+ L+ + Q++ G HS A+++ G + W
Sbjct: 168 DGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGW 227
Query: 148 GKNSNGQLGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G NS GQL L G KA P V L + + G E + +T G V ++GA S
Sbjct: 228 GSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSS 287
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH E + P+ ++ ++G+ +I + A + G+V FG
Sbjct: 288 GQLGHSAE-----------QRGPQCVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 333
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 15/223 (6%)
Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ E S +P +I + V +S G HS A+ G ++ WG S GQLG+G+ +
Sbjct: 78 LREESAPSSKPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKER 137
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P K++ L+GI Q + G+ S+A++ G+V SWG G+LG G+E
Sbjct: 138 SF-TPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVP------- 189
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF---QEGNHARR 280
S+ +P+ ++ LEG+ + AAG HS + +G + +G + ++ + +
Sbjct: 190 -SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYK 248
Query: 281 PSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P + L + CG HT VLT G +YT+G+N +G LG
Sbjct: 249 PLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLG 291
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 13/183 (7%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GEL+ WG+NS+GQLGLG+ P P VE L+G+ Q + G S+A++ G V SW
Sbjct: 913 GELFAWGQNSHGQLGLGRIFPSS-PTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSW 971
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LG G + S+ +P L++ L+ KV A G H+A + ++G V+
Sbjct: 972 GKNDFGQLGLGH---------TESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFT 1022
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSG-GELYTWGSNENG 318
FG ++ RP L+++L ++ CG +HT S G+++ +GS +NG
Sbjct: 1023 FGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNG 1082
Query: 319 CLG 321
LG
Sbjct: 1083 QLG 1085
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
G ++A G N GQLG+ S P + L +VQIS G HS A+++ G +Y WG
Sbjct: 913 GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
KN GQLGLG +K P+ + L A G + +T G V ++GAG G+
Sbjct: 973 KNDFGQLGLGHTESK--DSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
LGH + E P L+ EL G +V A G H+ A + E G+V+ FG
Sbjct: 1031 LGHSS---------TRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFG 1077
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LGLG ES+ P + A + + LACGG+HT LT+ G V+ G +GQ
Sbjct: 971 WGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
LG S L P ++ L V QI+ G H+ A + G+++ +G NGQLG
Sbjct: 1031 LGHSSTRD-ELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLG 1085
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 8/186 (4%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG + S P + L ++ G AH++ L+ TG VY+ G NDFG
Sbjct: 918 WGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFG 977
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ L + ++V ++ G H++ +T DG ++ +G GQLG
Sbjct: 978 QLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQLGHSSTR 1037
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLG----HGQESS 216
++ P V L G Q A G ++A V+ GKV ++G+G +G+LG H Q +S
Sbjct: 1038 DEL--RPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLGNCGTHNQPNS 1095
Query: 217 ILGFLR 222
+ R
Sbjct: 1096 YVNLRR 1101
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +++ + + G E S+AV G+V +WGAG G+LG G+ RS +
Sbjct: 88 PEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKE-----RS---F 139
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISK 286
TP+ IK L G+K+ + G+ HS + E+G+V+ +G + ++ L +E P +
Sbjct: 140 TPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRS 199
Query: 287 L---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
L P ++ V GG H+ L+ G + WGSN G L +
Sbjct: 200 LEGIPLAQ-VAAGGAHSFALSLSGTSFGWGSNSAGQLAL 237
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 142/286 (49%), Gaps = 17/286 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHS-LKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E V C F+K S ++ +ACG +T+ +T G +Y+ G ND+
Sbjct: 36 WGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDY 95
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V +++ G +H+ A+ G+L+ WG NS GQLGL
Sbjct: 96 GQLG-HERGRKRLQ--LILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNS 152
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K P V+ L Q A G + ++A+T G++ SWG+ G+LG G +
Sbjct: 153 KNFMECS-PRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR--- 208
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
SE P+LI L GV + A G HS I ++G ++ +G ++ + +
Sbjct: 209 -----SEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRN 263
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L ++ CG + LT G ++T G+ G LG G
Sbjct: 264 LPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHG 309
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 129/282 (45%), Gaps = 16/282 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG R + ++ + K +ACG HT+ + E G +++ G N GQL
Sbjct: 91 GNNDYGQLGHERGRKRLQLIL--GLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQL 148
Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P + L + VQ++ G H+ A+T +GELY WG NS GQLGLG
Sbjct: 149 GLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR 208
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P + L+G+ A G S+A++ G + WG G+LG
Sbjct: 209 SEVK-PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND--------- 258
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + P ++ L K+ AA G S + +G V+ G ++ N+ P
Sbjct: 259 TQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPR 318
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
+ +L S ++ CG HT L S G +Y WG G LG
Sbjct: 319 QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 360
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 14/185 (7%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G+++ WG +G+LGLG ++I +P +V+ +Q A G +V +T GK+ S
Sbjct: 31 GDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSC 90
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGH + L +LI L+ K A G H+ ++E G+++
Sbjct: 91 GNNDYGQLGHERGRKRL-----------QLILGLDAFVFKKVACGAYHTIAVNEWGQLFS 139
Query: 262 FGDRAVDKMLFQEGNHAR-RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENG 318
+G + ++ N P ++ L S +V CG H LT+ GELY+WGSN G
Sbjct: 140 WGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEG 199
Query: 319 CLGIG 323
LG+G
Sbjct: 200 QLGLG 204
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 12/181 (6%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGLG + S +P + + + +ACGG H++ ++++G ++ G N FG
Sbjct: 193 WGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFG 252
Query: 102 QLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+++ N+ + L+ LR ++ + G S +TVDG ++ G GQLG
Sbjct: 253 QLGLNDTQNRNLPHQLQTLR----NAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGH 308
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
G +++P +V L G Q + G ++A V G+V +WG GG+G+LG+ S
Sbjct: 309 GSNNNEILP--RQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRS 366
Query: 217 I 217
I
Sbjct: 367 I 367
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL ++R P + ACG ++FLT G V+ G +GQ
Sbjct: 246 WGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQ 305
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKKA 161
LG N L + + V QIS G H+ A + G +Y WG GQ LG +
Sbjct: 306 LGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQ--LGNNS 363
Query: 162 AKVIPIPTKV 171
+ IP P V
Sbjct: 364 TRSIPTPQVV 373
>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
familiaris]
gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 1003
Score = 119 bits (299), Expect = 2e-24, Method: Composition-based stats.
Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG + +
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
+ P+ + + G V++A G H+ + E VY FG + LF+
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFLFE-- 282
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I + + + CG HT ++T G +YT+G +G LG+G
Sbjct: 283 --TSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLG 330
Score = 95.5 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 30/258 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + L FT KQ + G S
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEER------STFHLISFFTSQRKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G +++ P+ + G + + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQIGLENVTNVC---------VPQQVT--VGKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYS-EEVVCGGYHTCVLTS 305
SA + G++Y FG+ K+ NH R P + +P +V CGG HT VLT
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Query: 306 GGELYTWGSNENGCLGIG 323
+YT+G + G LG+G
Sbjct: 261 KA-VYTFGLGQFGQLGLG 277
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P ++ + CG YH+ +T+ G+LYT+G E G LG+
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGL 224
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
+ACGG HT+ LTE VY GL FGQLG+ + + P I +K + + I+ G +H
Sbjct: 248 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENH 306
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
++ IT G +Y +G +G+LGLG + + IPT
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPT 341
Score = 39.7 bits (91), Expect = 2.1, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG S ++ P +CS F + ++ ++CGG HTL
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTL 362
>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
boliviensis boliviensis]
Length = 1170
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 155/324 (47%), Gaps = 35/324 (10%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVAVHLSCGDEHSAVVTGNNKLY--VFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVVQ 127
+K ACG HTL TE G VYATG ND GQLG+ E + L + + ++ Q
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHL--ISFFTPQHKIKQ 144
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G + S+A+T DG L+MWG NS GQ+GL +P + +G + G+
Sbjct: 145 LSAGSNTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVPH----QVTTGKPVSWISCGYY 200
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S VT G++ +G +G+LG L + ++ P+L+ E+ +++A G
Sbjct: 201 HSAFVTTDGELYIFGEPENGKLG-------LPYELLSNHRIPQLVPEIPEKVIQVACGG- 252
Query: 248 LHSACIDENGRVYI----FGDRAVDKMLFQEGNHARRPSLIS-----KLPYSEEVVCGGY 298
HS + EN FG + LF+ P ++ K+ Y + CG
Sbjct: 253 EHSVVLTENDLYTFGLGKFGQLGLGTFLFE----TSEPRVVESIKGRKISY---ISCGEN 305
Query: 299 HTCVLTSGGELYTWGSNENGCLGI 322
H +LT G +YT+G +G LG+
Sbjct: 306 HAALLTDTGLMYTFGDGRHGKLGL 329
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 125/257 (48%), Gaps = 28/257 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G +Y G N GQLGLG + T +S FT KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNDEGQLGLGDTEER-----TTFHLIS-FFTPQHKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G + + T+ G V + G+ H
Sbjct: 153 AALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTT-----------GKPVSWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDK--MLFQEGNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
SA + +G +YIFG+ K + ++ ++ R P L+ ++P +V CGG H+ VLT
Sbjct: 202 SAFVTTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTE- 260
Query: 307 GELYTWGSNENGCLGIG 323
+LYT+G + G LG+G
Sbjct: 261 NDLYTFGLGKFGQLGLG 277
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 136/286 (47%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN G+LG+G ++ + P C F LK + CGG H++FL G VY G N G
Sbjct: 4 WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCG 63
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG + G S P + L +++ +S G HS A+ G+L+ WG GQLGLG
Sbjct: 64 QLG-HDKAGIS--PEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTT 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
V IP V+ L Q G + VA++ G++ +WG SG+LG G+
Sbjct: 121 ETTV-RIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEP---- 175
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S+ P +K L G+ + AG HS + +G V+ +G ++ +
Sbjct: 176 ----SKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAV 231
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I K S++VV CG HT LT G L+T+G G LG G
Sbjct: 232 PCHI-KFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHG 276
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 10/184 (5%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LGLG E S+ P + L + GG H+ L+ +G V+ G N G
Sbjct: 160 WGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAG 219
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+++ ++ P I L+ ++VV IS G H++A+T DG L+ +G S GQLG G
Sbjct: 220 QLGLNDKQDRAV-PCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGST 278
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P +V L G Q A G ++A V G V ++G G+LG G ILG
Sbjct: 279 NSEL--LPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTG----ILG 332
Query: 220 FLRS 223
RS
Sbjct: 333 DARS 336
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT+ G ++ G +GQ
Sbjct: 213 WGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQ 272
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ L EV QI+ G HH+ A + G +Y +G NS+GQLG G
Sbjct: 273 LG-HGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGIL 331
Query: 161 AAKVIPIPTKVECLSGIF 178
P P K S F
Sbjct: 332 GDARSPFPVKTSVPSEDF 349
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 45/171 (26%)
Query: 198 VLSWGAGGSGRLGHGQESSI-------------------------LGFLRSTSEYT---- 228
+L WG G+LG G E + + + S YT
Sbjct: 1 MLCWGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSN 60
Query: 229 -------------PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQE 274
P ++ L+ K+ + + G HS ++E G+++ +G ++ L
Sbjct: 61 SCGQLGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTT 120
Query: 275 GNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R P L+ +L +V+CG H L+ G+L+TWG N +G LG+G
Sbjct: 121 ETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLG 171
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIG 323
HT L S G +Y +G G LG G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTG 330
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNV 335
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIG 323
HT L S G +Y +G G LG G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTG 330
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNV 335
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 144/285 (50%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + +P +I L + +V ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG---HDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL S++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG S+ P + + L +A GGAH+ L+ +G V+ G N G
Sbjct: 161 WGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDERDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNV 335
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G HH+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIG 323
HT L S G +Y +G G LG G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTG 330
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNV 335
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G YG+LG S S + S+ E ++ ++CG H++ +++ G +Y+ G GQL
Sbjct: 59 GQNPYGQLGRKSNNSSIEQI--SSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQL 116
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + P +I+GL +++QIS G HS A++ DG ++ WG+N GQLGLG +
Sbjct: 117 GTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQII 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P V+ L GI Q G QS A++ G V +WG +G+LG + ++
Sbjct: 177 NQA-TPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDP-----MK 230
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T + P + L + V + G H+A + ++G VY FGD ++ GN P
Sbjct: 231 GT--FKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQ 288
Query: 283 LISKLP-YSEEVVCGGYHT 300
I +V CG YHT
Sbjct: 289 KIEDYAGQVSQVACGRYHT 307
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 147/286 (51%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+L L E + + + ++ ++CG HTL+L E G + + G N +
Sbjct: 4 WGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQNPY 63
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N S+E +IS L+ + +V IS G +HS A++ +G +Y WG S GQLG G
Sbjct: 64 GQLGRKSN-NSSIE--QISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGN 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ P K+ L Q + G S+A++ G+V SWG G+LG G S I+
Sbjct: 121 LSSRNF-TPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLG--SQII- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
++ TP+L+K L+G+ + AG S + +G V+ +G ++ F+
Sbjct: 177 -----NQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKG 231
Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+P ++ L + CG HT VL+ G +YT+G + +G LG
Sbjct: 232 TFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLG 277
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+G G+LG G+L SR + P + + ++CG H+L L+E G V++ G N G
Sbjct: 108 WGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ I P + LK +VQ++ G S A+++ G ++ WGKN+ GQLG
Sbjct: 168 QLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSD 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--GQESSI 217
K P V L + + G E + ++ G V ++G G+LG G ++S+
Sbjct: 228 PMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSV 286
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 7/208 (3%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LGLGS + ++ P + + + L + GG+ + L+ +G V+A G N+ G
Sbjct: 161 WGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAG 220
Query: 102 QLGI-SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S+ + + +P ++ L+ V IS G H++ ++ DG +Y +G +++GQLG +
Sbjct: 221 QLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLG--Q 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E +G ++ A + + V +++S+G GS R E S
Sbjct: 279 NSGNQTSVPQKIEDYAGQVSQVACGRYHTLLYVFSCNRIVSFGK-GSLRPQDNTECSDEA 337
Query: 220 FLRSTSEYTPRL-IKELEGVKVKIAAAG 246
L S + + + +L V VK AG
Sbjct: 338 ELPSEFDISSLVPTNDLRDVYVKWIFAG 365
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG N GQL L + +V+ S ++ + G + ++ + G +LS G
Sbjct: 1 MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQ 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG R ++ + I LE + + G HS + + G +Y +G
Sbjct: 61 NPYGQLG-----------RKSNNSSIEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWG 109
Query: 264 DRAVDKMLFQEGNHARR---PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
D + ++ GN + R P I+ L ++ ++ CG +H+ L+ G +++WG N+ G
Sbjct: 110 DGSEGQL--GTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCG 167
Query: 319 CLGIG 323
LG+G
Sbjct: 168 QLGLG 172
>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
Length = 1345
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 143/287 (49%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG+G+ + + SA + + + +A H+L LT++G V++ G D+
Sbjct: 543 GEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDY 602
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVV ++ G+ HS+ +TVDG+L+ +G G+LG G
Sbjct: 603 GKLG-HGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGN 661
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
A K P +V L Q A G ++ ++ G V ++G G G+LG G
Sbjct: 662 SANK--KTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGS----- 714
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
T++ +P+ I L G+ K G S + +GRV+ FG +
Sbjct: 715 ----CTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGP 770
Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++P I L + ++V G H LTS GE++ WG+N +G LG+G
Sbjct: 771 QKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLG 817
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + +ACG H+ +T G ++ G D+G+
Sbjct: 597 WGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGR 656
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG N P R++ L+K + Q++ G +H+ ++ DG ++ +G G+LGLG
Sbjct: 657 LG-HGNSANKKTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSC 715
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P ++ L+GI K+ G + SV +T G+V S+ G RL E + G
Sbjct: 716 TAKT--SPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSF---GQERLTGQPEGRLRG- 769
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+ I+ L + G H + G V+ +G+ ++ N R
Sbjct: 770 -----PQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQRE 824
Query: 281 PSLISKL 287
P +I L
Sbjct: 825 PCVIPDL 831
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL-- 184
Q+ G + + + V+G + G+ S G+LG+G P + L G Q A
Sbjct: 522 QVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSP--ISALQGYVVIQIATSR 579
Query: 185 GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S+A+T G+V SWG G G+LGHG S + PR I+ L G +V
Sbjct: 580 GSDGHSLALTDSGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALRGEEVVNM 630
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
A GF HSA + +G+++ FG+ ++ + + P ++ L +V CG HT
Sbjct: 631 ACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTL 690
Query: 302 VLTSGGE-LYTWGSNENGCLGIG 323
VL++ G ++ +G + G LG+G
Sbjct: 691 VLSADGNTVWAFGDGDYGKLGLG 713
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 21/187 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ Y+WG +GQL ++ + + +PT + L+ +Q G + V G +L+ G
Sbjct: 489 DAYLWGGGRHGQLA---ESGRGVNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACG 543
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG-VKVKIAAA--GFLHSACIDENGRV 259
G GRLG G + +T I L+G V ++IA + HS + ++G V
Sbjct: 544 EGSYGRLGMGNSDDL---------FTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEV 594
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
+ +GD K+ + RRP I L EEVV CG H+ V+T G+L+T+G+ +
Sbjct: 595 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-RGEEVVNMACGFKHSAVVTVDGKLFTFGNGD 653
Query: 317 NGCLGIG 323
G LG G
Sbjct: 654 YGRLGHG 660
>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
Length = 364
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ G P+L++ ++G+ +I + A + G+V FG D
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLAL 215
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
QAA G S+ + +VLS G G+LG + + G L P I+ LE + V
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGEL-------PEPIQALETLIV 77
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGG 297
+ + G HS + GRV+ +G + ++ F+E + + + +V CG
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
YH+ L+ ++++WG N +G LG+G
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLG 163
>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
cuniculus]
Length = 882
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 149/290 (51%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K +ACG HTL TE G VYATG N+ G
Sbjct: 58 MFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDG 117
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G + P+ + ++ Q+S G + S+A+T +GEL+MWG NS GQ+GL K
Sbjct: 118 QLGLGDTEGRNTFYPISFFTSQHKIKQLSAGSNTSAALTENGELFMWGDNSEGQIGL--K 175
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ ++G +G+LG +E I
Sbjct: 176 NVTNVCVPHQVTI--GKPISWISCGYYHSAFVTMDGELYTFGECENGKLGLPEELLI--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
+ TP+L+ + +++A G H+ + E VY FG + +F+
Sbjct: 231 ----NHKTPQLVTRIPEKVIQVACGGG-HTVVLTET-IVYTFGLGQFGQLGLGTFIFE-- 282
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I + + + CG HT ++T G +YT+G G LG+G
Sbjct: 283 --TSEPKAIEYIKDHKISSISCGENHTALITELGRMYTFGDGRYGKLGLG 330
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 20/253 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
L+CG HT +T +Y G N++GQLG+ + +P + LK E V+ ++ G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTIN-KPTCVKALKPEKVKYVACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ T +G +Y G N++GQLGLG + P S KQ + G S A+T
Sbjct: 99 TLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISF-FTSQHKIKQLSAGSNTSAALTE 157
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ WG G+ +G T+ P + G + + G+ HSA +
Sbjct: 158 NGELFMWGDNSEGQ---------IGLKNVTNVCVPHQV--TIGKPISWISCGYYHSAFVT 206
Query: 255 ENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELY 310
+G +Y FG+ K+ E NH + P L++++P +V CGG HT VLT +Y
Sbjct: 207 MDGELYTFGECENGKLGLPEELLINH-KTPQLVTRIPEKVIQVACGGGHTVVLTETI-VY 264
Query: 311 TWGSNENGCLGIG 323
T+G + G LG+G
Sbjct: 265 TFGLGQFGQLGLG 277
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTKFAENI-----PSKFWFKNDVPTYLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K I PT V+ L K A G ++ T G V + G G+LG G
Sbjct: 72 KT--TINKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNT 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F S +T + K+K +AG SA + ENG ++++GD + ++ + +
Sbjct: 130 FY-PISFFTSQH-------KIKQLSAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVC 181
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P ++ + CG YH+ +T GELYT+G ENG LG+
Sbjct: 182 VPHQVTIGKPISWISCGYYHSAFVTMDGELYTFGECENGKLGL 224
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 17/83 (20%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT----G 96
+G+G YG+LGLG + +++ P +C F + ++ +ACGG H + ++AT
Sbjct: 319 FGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACGGCHMV-------IFATPRLGS 371
Query: 97 LNDFGQLGISENIGYSLEPLRIS 119
N+F +S+ YS PL S
Sbjct: 372 ANEF----VSDEPNYSYFPLSSS 390
>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
Length = 1057
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 140/297 (47%), Gaps = 29/297 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ S ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 285 WGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNA 344
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG + +V +S G H++ IT G+LY +G + G LG G
Sbjct: 345 GLLGHGSNVSHWI-PKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHG 403
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---------TGGGKVLSWGAGGSGRL 209
+ + I P +VE L G+ T + G + AV T GK+ +WG G RL
Sbjct: 404 NR--ETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRL 461
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P + L A G + + +G ++ G +V
Sbjct: 462 GHGDRSSKL---------KPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGS-SVYG 511
Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L N R P L+ + EV CG YH VLT GE+YTWG NG LG G
Sbjct: 512 QLGNPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHG 568
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G S+ +P + ++ CG T+ LT +G ++ G + +GQ
Sbjct: 453 WGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQ 512
Query: 103 LGISENIGYSLEPLRISGLKKE------VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LG N G R L +E VV+++ G +H + +T GE+Y WGK +NG+LG
Sbjct: 513 LGNPNNDG------RYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLG 566
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALG 185
G A + PT VE L K+ A G
Sbjct: 567 HGDIADR--KTPTFVEALRDRSVKRIACG 593
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 142 GELYMWG--------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG + + AA I +P +E + A G + + VT
Sbjct: 218 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 277
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +SI + PRL++ L V+ A G H+ I
Sbjct: 278 RQAEVFTWGEECSGRLGHGAGTSI---------FQPRLVESLSICNVETIACGEFHTCAI 328
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD + L G++ P +S P V CG +HT ++TS G
Sbjct: 329 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLEGLQVSAVSCGTWHTALITSSG 387
Query: 308 ELYTWGSNENGCLGIG 323
+LYT+G G LG G
Sbjct: 388 KLYTFGDGTFGVLGHG 403
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKNGGVFTFGAGSCGQLG 275
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG++ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD---------RESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + +NG V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIG 323
HT + S G +Y +G G LG G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T +G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + GE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + GG+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT+ G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
Length = 385
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ G P+L++ ++G+ +I + A + G+V FG D
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLAL 215
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVK 239
QAA G S+ + +VLS G G+LG G + L P I+ LE +
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL----------PEPIQALETLI 76
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCG 296
V + + G HS + GRV+ +G + ++ F+E + + + +V CG
Sbjct: 77 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCG 136
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
YH+ L+ ++++WG N +G LG+G
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLG 163
>gi|147920282|ref|YP_685948.1| regulator of chromosome condensation [Methanocella arvoryzae MRE50]
gi|110621344|emb|CAJ36622.1| predicted regulator of chromosome condensation [Methanocella
arvoryzae MRE50]
Length = 451
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 13/285 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +YG+LG G+ + V + + A++ G H L L G V+A G N FGQ+
Sbjct: 100 GDNEYGQLGDGTRVDSSKAVQVQCLSE--VVAISAGDCHNLALKRDGTVWAWGCNLFGQI 157
Query: 104 GISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G ++N+G+ L P+++ GL V +IS GY S AIT DG ++ WG N GQ+G G K
Sbjct: 158 G-NDNVGHDELTPVQVPGLSG-VKEISAGYMGSKAITGDGTVWAWGINEYGQIGDGTKEI 215
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ + +S I T + + S+A+ G V +WG G G+LG E ++ L
Sbjct: 216 RSLPVRISINNVSAIDTGE----YGTSIALKSDGSVWTWGNNGQGQLGDPAEDTLSMMLP 271
Query: 223 STSEYTPRLIKELEG--VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--LFQEGNHA 278
++ + RL+ G V +AG +S + ++G ++++G+ + + G +
Sbjct: 272 VSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTLWVWGENQEGRFGNGLKFGRDS 331
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP ++ L V G + L+ G +Y WG N G +G G
Sbjct: 332 IRPVIVPGLNNIVSVKAGASYMLALSDDGTVYGWGKNIFGAVGNG 376
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT-LFLTETGCVYATGLNDFG 101
WG +YG++G G+ E R PV S +++ A+ G T + L G V+ G N G
Sbjct: 200 WGINEYGQIGDGTKEIRSLPVRISI---NNVSAIDTGEYGTSIALKSDGSVWTWGNNGQG 256
Query: 102 QLGISENIGYSLEPLRISGLKKE------------VVQISTGYHHSSAITVDGELYMWGK 149
QLG S+ L +S L E V +S G +S A+ DG L++WG+
Sbjct: 257 QLGDPAEDTLSMM-LPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTLWVWGE 315
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N G+ G G K + P V L+ I + +A G +A++ G V WG G +
Sbjct: 316 NQEGRFGNGLKFGRDSIRPVIVPGLNNIVSVKA--GASYMLALSDDGTVYGWGKNIFGAV 373
Query: 210 GHGQES 215
G+G+ S
Sbjct: 374 GNGERS 379
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEK---------HSLKALACGGAHTLFLTETGC 91
WGN G+LG + + S PV E+ +++ +++ G ++L + + G
Sbjct: 250 WGNNGQGQLGDPAEDTLSMMLPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGT 309
Query: 92 VYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
++ G N G+ G G S+ P+ + GL +V + G + A++ DG +Y WGKN
Sbjct: 310 LWVWGENQEGRFGNGLKFGRDSIRPVIVPGLNN-IVSVKAGASYMLALSDDGTVYGWGKN 368
Query: 151 SNGQLGLGKKAAKVI 165
G +G G+++ V+
Sbjct: 369 IFGAVGNGERSETVV 383
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIG 323
HT L S G +Y +G G LG G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTG 330
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNV 335
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIG 323
HT L S G +Y +G G LG G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTG 330
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNV 335
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
distachyon]
Length = 913
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 139/299 (46%), Gaps = 32/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + +V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 N--VKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARLN---------PTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ N RP L+ +E +V CG YH VLTS E++TWG NG LG G
Sbjct: 329 GQL--GNPNSDGRPCLVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHG 385
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG++V + G H+A I G+++ FGD + + P + L
Sbjct: 177 ISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHG 282
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E+R P ++ + +ACG + T+ LT +G V+ G + +GQ
Sbjct: 271 WGDGDKHRLGHGDKEARLNPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQ 330
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G P + + V+Q++ G +H S +T E++ WGK +NG+LG G
Sbjct: 331 LGNPNSDG---RPCLVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGDI 387
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT VE L + A G + A+
Sbjct: 388 EDQ--KVPTLVEALKDRSVRHIACGANFTAAI 417
>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
rerio]
Length = 708
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 157/324 (48%), Gaps = 27/324 (8%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
A +K++LK D+ L G + + + F ++G+ ++G+LGLG+ + +P A
Sbjct: 27 APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
+K ACG HTL T G +YA G N+ GQLG+ + N S + + +
Sbjct: 85 LRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ G + S+A+T DG LYM G NS GQ+GLGK++ + P V G + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S VT G + ++G SG+LG E + + P+ + ++ V++A G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253
Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
H+ + EN VY FG ++ +F+ +R P ++ + CG H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T ++T G LYT+G +G LG+G
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLG 331
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G G +G+LG G+ ESR P V F K +K ACG HT +T+ G +Y G
Sbjct: 267 FGLGQFGQLGHGTFIFESRL-PRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRH 325
Query: 101 GQLGI-SENIGYSLEP 115
G+LG+ EN +P
Sbjct: 326 GKLGLGEENFTNQFKP 341
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + ++++P +C F + + ++ CGG H L L
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVL 365
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 137/281 (48%), Gaps = 23/281 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+L +R PV + +A G H+L L G V+A G ND GQ
Sbjct: 118 WGRNDDGQLGDGTLSTRGDPVQVQGLS--GVTTVALGATHSLALCYDGSVWAWGANDHGQ 175
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +I P ++GL+ EVV ++ G +HS A+ DG ++ WG+N +GQLG G
Sbjct: 176 LGDGTSIARR-TPQMVAGLQ-EVVAVAAGANHSLAVLSDGTVWAWGENYDGQLGDGTTVT 233
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+P ++ LSGI A G S+A+ G V +WG+ SG+LG G
Sbjct: 234 RRVPVP--IQGLSGIVA--VASGTSHSLALRYDGNVWAWGSNYSGQLGDGS--------- 280
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
S S +P + EL G+ V + G +S + +G V+ +G ++ +G R
Sbjct: 281 SLSRSSPVQVTELSGI-VSV-EGGPDYSMAVRYDGTVWTWGINTYGQL--GDGTTIARSV 336
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P S L V G H + + ++ WG N NG G
Sbjct: 337 PVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRG 377
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 136/279 (48%), Gaps = 21/279 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ ++RW P A ++ ++A G H+L + + G ++A G N GQ
Sbjct: 416 WGANNEGQLGDGTTKNRWAP----AEVLGNVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQ 471
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+++ G+ + ++ G +S A+ D L+ WG+NS GQLG G
Sbjct: 472 LGDGTGSSRTI-PMQVPGISG-IASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVN 529
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +PT+V+ LSGI A G +AV G V +WG SG+LG G
Sbjct: 530 R--HVPTRVQGLSGIVA--IATGNGHMLAVRSNGTVWAWGDNSSGQLGDGT--------- 576
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + TP ++ L + AAG HS + +G ++ +G ++ G P+
Sbjct: 577 TINRATPVQVQVLS--GIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPT 634
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + + V +H+ + + G L+ WG+N G LG
Sbjct: 635 QVQGIGSAVAVSAAKHHSLAVLADGTLWDWGANNYGQLG 673
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 124/261 (47%), Gaps = 27/261 (10%)
Query: 68 FEKHSLKA---LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKK 123
F S +A +A ++L + G V+ G +S N Y + P ++ GL
Sbjct: 41 FTLQSAQARDRIAASSMNSLAIRSDGTVWTVGTRY-----VSANGWYRQDWPGQLPGLSG 95
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I +G S A+ DG ++ WG+N +GQLG G + + P+ +V+ LSG+ T A
Sbjct: 96 -MVSIDSGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPV--QVQGLSGVTT--VA 150
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
LG S+A+ G V +WGA G+LG G S + TP+++ L+ +V
Sbjct: 151 LGATHSLALCYDGSVWAWGANDHGQLGDGT---------SIARRTPQMVAGLQ--EVVAV 199
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCV 302
AAG HS + +G V+ +G+ D L RR P I L V G H+
Sbjct: 200 AAGANHSLAVLSDGTVWAWGEN-YDGQLGDGTTVTRRVPVPIQGLSGIVAVASGTSHSLA 258
Query: 303 LTSGGELYTWGSNENGCLGIG 323
L G ++ WGSN +G LG G
Sbjct: 259 LRYDGNVWAWGSNYSGQLGDG 279
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 129/281 (45%), Gaps = 23/281 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG GS SR PV + E + ++ G +++ + G V+ G+N +GQ
Sbjct: 268 WGSNYSGQLGDGSSLSRSSPVQVT--ELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQ 325
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S+ P++ SGL VV ++ G H+ A+ + ++ WG N NGQ G ++
Sbjct: 326 LGDGTTIARSV-PVQTSGLSG-VVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSV 383
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P E ++ T + S+AV G + +WGA G+LG G
Sbjct: 384 YFSPRTILNEVVTMAATN------DHSLAVRSDGGLWAWGANNEGQLGDGT--------- 428
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + + P E+ G V + AAG HS + ++G ++ +G V ++ G+ P
Sbjct: 429 TKNRWAP---AEVLGNVVSV-AAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPM 484
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + V G ++ L L+ WG N G LG G
Sbjct: 485 QVPGISGIASVAAGSDYSVALRYDRTLWAWGENSYGQLGDG 525
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 23/250 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
+A H+L + G ++A G N+ GQLG ++N P + G VV ++ G
Sbjct: 397 MAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKN---RWAPAEVLG---NVVSVAAGRR 450
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS A+ DG L+ WG N+ GQLG G +++ IP+ +V +SGI + A G + SVA+
Sbjct: 451 HSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPM--QVPGISGIAS--VAAGSDYSVALR 506
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ +WG G+LG G + + + P ++ L G+ V I A G H +
Sbjct: 507 YDRTLWAWGENSYGQLGDGT---------TVNRHVPTRVQGLSGI-VAI-ATGNGHMLAV 555
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
NG V+ +GD + ++ + P + L V G H+ + G L+ WG
Sbjct: 556 RSNGTVWAWGDNSSGQLGDGTTINRATPVQVQVLSGIVAVAAGAAHSLAVRYDGTLWAWG 615
Query: 314 SNENGCLGIG 323
N LG G
Sbjct: 616 INNTSQLGDG 625
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 23/225 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ +R P + A+A G H L + G V+A G N GQ
Sbjct: 514 WGENSYGQLGDGTTVNRHVPTRVQGLS--GIVAIATGNGHMLAVRSNGTVWAWGDNSSGQ 571
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + P+++ L V + HS A+ DG L+ WG N+ QLG G
Sbjct: 572 LGDGTTINRA-TPVQVQVLSGIVAVAAG-AAHSLAVRYDGTLWAWGINNTSQLGDGTGIP 629
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ +PT+V+ + AA S+AV G + WGA G+LG Q++
Sbjct: 630 RL--VPTQVQGIGSAVAVSAA--KHHSLAVLADGTLWDWGANNYGQLGRNQDN------- 678
Query: 223 STSEYTPRLIKELEGVKVKIA----AAGFLHSACIDENGRVYIFG 263
+ TP + L GV + + GF HS + +G Y+ G
Sbjct: 679 --TNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDG--YLVG 719
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 10/179 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +R PV A AH+L + G ++A G+N+ Q
Sbjct: 564 WGDNSSGQLGDGTTINRATPVQVQVLSGIVAVAAGA--AHSLAVRYDGTLWAWGINNTSQ 621
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I L P ++ G+ V +S HHS A+ DG L+ WG N+ GQLG +
Sbjct: 622 LGDGTGI-PRLVPTQVQGIGSAVA-VSAAKHHSLAVLADGTLWDWGANNYGQLG--RNQD 677
Query: 163 KVIPIPTKVECLSGIF----TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P P+KV L+G+ T ++GF S+A+ G ++ WG G+LG G +I
Sbjct: 678 NTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGTGVPENI 736
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + +LG G+ R P S A++ H+L + G ++ G N++GQ
Sbjct: 614 WGINNTSQLGDGTGIPRLVPTQVQGIG--SAVAVSAAKHHSLAVLADGTLWDWGANNYGQ 671
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIST-----GYHHSSAITVDGELYMWGKNSNGQLGL 157
LG +++ + P +++ L + T G+ HS A+ DG L WG N+ GQLG
Sbjct: 672 LGRNQD-NTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGT 730
Query: 158 GKKAAKVIPIP 168
G + IP+P
Sbjct: 731 G--VPENIPVP 739
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 144/298 (48%), Gaps = 41/298 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LG GS + +P A + +K ACG HTL TE G VYA G N G
Sbjct: 58 MFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNSEG 117
Query: 102 QLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ + S L IS K+ + Q++ G + S+ +T DG+L MWG NS GQ+GLG
Sbjct: 118 QLGLGDTEERSTFHL-ISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGD 176
Query: 160 KAAKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
KA +P I V C+S G+ S +T G++ ++G +G+LG
Sbjct: 177 KAYVSVPHQVDIGKPVSCIS--------CGYYHSALITQDGELYTFGEPENGKLG----- 223
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
L + + P+L+ + G KV A G H+ + E G VY FG L Q G
Sbjct: 224 --LSPKQLKNHKLPQLVSGISG-KVSKVACGGGHTVVLAE-GDVYTFG-------LGQYG 272
Query: 276 N--------HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + + CG HT ++T G +YT+G +G LG+G
Sbjct: 273 QLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLGLG 330
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 142/290 (48%), Gaps = 20/290 (6%)
Query: 23 KLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACG 79
KL C R + T Q A GN + G+LGLG E R + S F K H +K LA G
Sbjct: 90 KLAACGRNHTLICTEQGNVYAAGGNSE-GQLGLGDTEERSTFHLISFFTKQHKIKQLAAG 148
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
+ LTE G + G N GQ+G+ + S+ P ++ + K V IS GY+HS+ IT
Sbjct: 149 SYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSV-PHQVD-IGKPVSCISCGYYHSALIT 206
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
DGELY +G+ NG+LGL K K +P V +SG +K A G V G V
Sbjct: 207 QDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISGKVSKVACGGGH--TVVLAEGDVY 264
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G G G+LGHG F+ TSE P+ + L K+ A G H+A I ENG +
Sbjct: 265 TFGLGQYGQLGHGT------FVFETSE--PKTVDHLGKHKICHIACGENHTALITENGLM 316
Query: 260 YIFGDRAVDKMLFQEGNHARR--PSLISKLPY--SEEVVCGGYHTCVLTS 305
Y FGD K+ E N+ + P+L S V CGG H V S
Sbjct: 317 YTFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACGGCHMLVFAS 366
>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
Length = 245
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 15/237 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 100 FGQLG---ISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+GQLG I E I LEP + + K+V + G H+ + DG +Y G N GQL
Sbjct: 9 YGQLGLGGIDEEI--VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQL 66
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQE 214
G K K P +V L + G ++A+ G+V +WG G+LG G E
Sbjct: 67 GHEKSRKK----PEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE 122
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQ 273
I PR IK L +++ A G+ HS + + V+ +G ++ L
Sbjct: 123 ECI---------RVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI 173
Query: 274 EGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
E P LI L P+ + V GG H+ VLT G ++ WG N+ G LG+
Sbjct: 174 ECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 14/183 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH S P + L+ + + G H+ +++ G+VY +G
Sbjct: 61 NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+ ++ Q R P I L + +V CG YH+ L+ E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 321 GIG 323
G+G
Sbjct: 170 GLG 172
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGIS-ENIGYSLE 114
QLG++ EN +SLE
Sbjct: 221 QLGLNDENGRFSLE 234
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIG 323
HT L S G +Y +G G LG G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTG 330
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSV 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNV 335
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|195996231|ref|XP_002107984.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
gi|190588760|gb|EDV28782.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
Length = 347
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 20/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL----TETGCVYATGLND 99
G YG+LGLG + + P K + GG H++FL ETG +YA G N+
Sbjct: 31 GANSYGQLGLGHTDDKITPQKMPNL-NFKPKWIGGGGGHSVFLDVYVAETGELYACGWNN 89
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ L+ L + +++ G++H+ A++V+G+LY WG N+ GQLG
Sbjct: 90 NGQLGLEHQ--DNVTRLQKLSLPIRMQKVACGWNHTIALSVEGKLYSWGSNAFGQLGHSP 147
Query: 160 KA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +I PT +E +S G + AV G+ SWGA G+LG G+ I+
Sbjct: 148 CSRGSIINTPTLIEDISDREFIDTCAGLRHTHAVEACGQTWSWGACKKGQLGIGERMDIV 207
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P LI L G++VK AG HSAC+ E G V+ +G + + +
Sbjct: 208 --------EKPVLISTLRGIRVKKVVAGSYHSACLTECGEVFCWGSNRYGQCTLADKTES 259
Query: 279 RRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P IS ++ G H + GG +Y+WG + G LG
Sbjct: 260 LIPVKISSESCVNKCFIDIHSGWSHVVAVVEGGIVYSWGRCDYGQLG 306
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 43 WGNGDYGRLG-----LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG+ +G+LG GS+ + P + G HT + G ++ G
Sbjct: 135 WGSNAFGQLGHSPCSRGSIINT--PTLIEDISDREFIDTCAGLRHTHAVEACGQTWSWGA 192
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQLGI E + +P+ IS L+ V ++ G +HS+ +T GE++ WG N GQ
Sbjct: 193 CKKGQLGIGERMDIVEKPVLISTLRGIRVKKVVAGSYHSACLTECGEVFCWGSNRYGQCT 252
Query: 157 LGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
L K +IP+ E C++ F + G+ VAV GG V SWG G+LG+ + S
Sbjct: 253 LADKTESLIPVKISSESCVNKCFIDIHS-GWSHVVAVVEGGIVYSWGRCDYGQLGYTELS 311
Query: 216 S 216
Sbjct: 312 D 312
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 41/194 (21%)
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ-------------SVAVTG 194
G NS GQLGLG K+ P K L F+ V V
Sbjct: 31 GANSYGQLGLGHTDDKITP------------QKMPNLNFKPKWIGGGGGHSVFLDVYVAE 78
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ + G +G+LG + ++ RL K ++++ A G+ H+ +
Sbjct: 79 TGELYACGWNNNGQLGLEHQDNVT-----------RLQKLSLPIRMQKVACGWNHTIALS 127
Query: 255 ENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEV-VCGGY-HTCVLTSGGEL 309
G++Y +G A ++ G+ P+LI + E + C G HT + + G+
Sbjct: 128 VEGKLYSWGSNAFGQLGHSPCSRGSIINTPTLIEDISDREFIDTCAGLRHTHAVEACGQT 187
Query: 310 YTWGSNENGCLGIG 323
++WG+ + G LGIG
Sbjct: 188 WSWGACKKGQLGIG 201
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID----EN 256
W G +GQ LG + + TP+ + L K K G HS +D E
Sbjct: 25 WSQRQQGANSYGQ----LGLGHTDDKITPQKMPNLN-FKPKWIGGGGGHSVFLDVYVAET 79
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
G +Y G ++ + ++ R +S ++V CG HT L+ G+LY+WGSN
Sbjct: 80 GELYACGWNNNGQLGLEHQDNVTRLQKLSLPIRMQKVACGWNHTIALSVEGKLYSWGSNA 139
Query: 317 NGCLG 321
G LG
Sbjct: 140 FGQLG 144
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE--KHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ YG+ L PV S+ + G +H + + E G VY+ G D+
Sbjct: 243 WGSNRYGQCTLADKTESLIPVKISSESCVNKCFIDIHSGWSHVVAVVEGGIVYSWGRCDY 302
Query: 101 GQLGISE-----NIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
GQLG +E + Y EP + L ++ QI+ G H+ I+
Sbjct: 303 GQLGYTELSDGDSKRYQQEPACVPNL-HDLRQIACGSEHNIVIS 345
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC ++K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIG 323
HT + S G +Y +G G LG G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 20/238 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ G P+L++ ++G+ +I + A + G+V FG D
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLTVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN +G L +
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALS 216
>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
Length = 1205
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 89/282 (31%), Positives = 133/282 (47%), Gaps = 25/282 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG GS R PV S+ A H+L L G V+A G N++GQ
Sbjct: 110 WGFNGYGQLGDGSTTGRNTPVQVEGLR--SIVGAAAHYDHSLALKSDGTVWAWGRNEYGQ 167
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+R+ GL VV IS+G+ +S A+ DG ++ WGKN GQLG G
Sbjct: 168 LGDGSKTDRH-TPVRVKGLD-SVVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQ 225
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ +V+ L + A G ++A+ G V SWG +G+LG G +
Sbjct: 226 SSAPV--QVQGLHSV--TAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSD-------- 273
Query: 223 STSEYTPRLIKELEGVKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
YTP ++EG + AGF HS + +G V+ +G+ ++ F P
Sbjct: 274 -MDRYTP---VQVEGFSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWGFGSST----P 325
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +L ++ G H+ + + G ++ WG N+NG LG G
Sbjct: 326 VQVQELDSVVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDG 367
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG GS PV HS+ A+A G H L + G V++ G N GQ
Sbjct: 210 WGKNEYGQLGNGSTTQSSAPVQVQGL--HSVTAVASGDYHNLAIKRDGTVWSWGPNLAGQ 267
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+++ G V + G+ HS A+ DG ++ WG + G G
Sbjct: 268 LGDGSDMD-RYTPVQVEGFS-SAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWGFGSST- 324
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
P +V+ L + A G + S+AV G V +WG +G+LG G ++ L
Sbjct: 325 -----PVQVQELDSVV--DIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTARL 373
Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 50/134 (37%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R+ PV F S + G H+L L G V+A G F +
Sbjct: 260 WGPNLAGQLGDGSDMDRYTPVQVEGFS--SAVDVDAGFGHSLALKSDGTVWAWGNYQFNE 317
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G S P+++ L VV I+ G HS A+ DG ++ WGKN NGQLG G A
Sbjct: 318 WGFG-----SSTPVQVQELD-SVVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTA 371
Query: 163 KVIPIPTKVECLSG 176
++ PI KV+ G
Sbjct: 372 RLTPI--KVQGFGG 383
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGL + + +P A + + +CG HTL TE G +Y++G N G
Sbjct: 60 VFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEG 119
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G S + + + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K+
Sbjct: 120 QLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKE 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P K++ G + G+ S VT G++ ++G +G+LG L
Sbjct: 180 A--IYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPS 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
+ P+ + L G KVKI + G H+ + E VY FG ++ +F+
Sbjct: 229 DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFE-- 284
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P + L V CG HT V+T G LYT+G +G LG+G
Sbjct: 285 --TQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLG 332
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 26/256 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++CG HT+ +T G +Y G N++GQLG+ S +P + LK E VV S G +H
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAIS-KPTCVKALKSEKVVFASCGRNH 100
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
+ T G+LY G NS GQLGLG + + T + +S T KQ + G S
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGR-----TSFQEISFFNTQYKIKQLSAGSNTSA 155
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G+LG +E+ TP+ I G + + G+ HS
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIY---------STPQKID--IGKPISWISCGYYHS 204
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEEVV-CGGYHTCVLTSGG 307
A + ++G +Y FG+ K+ ++P +S L ++V CGG HT +T
Sbjct: 205 AFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTE-K 263
Query: 308 ELYTWGSNENGCLGIG 323
E+YT+G + G LG G
Sbjct: 264 EVYTFGLGQFGQLGHG 279
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + + IS G H+ +T +G+LY++G N+ GQLGL
Sbjct: 19 FGKSKFAENI-----PSKFWLKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGL-- 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+A I PT V+ L A+ G ++ T GK+ S G G+LG G S
Sbjct: 72 EAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTS 131
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + T IK+L +AG SA + +G+++++GD + ++ ++
Sbjct: 132 FQEISFFNTQYKIKQL--------SAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYS 183
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P I + CG YH+ +T GELYT+G ENG LG+
Sbjct: 184 TPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGL 226
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEK----HSLKALACGGAHTLFLTETGCVYATGL 97
+WG+ G+LGL + + S +K + ++CG H+ F+T+ G +Y G
Sbjct: 165 MWGDNSEGQLGL------EKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGE 218
Query: 98 NDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ G+LG+ S+ + +P R+SGL +V +S G H+ A+T + E+Y +G GQLG
Sbjct: 219 PENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVT-EKEVYTFGLGQFGQLG 277
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + +P V+ L+ G + +T G + ++G G G+LG G+E+
Sbjct: 278 HGTFIFETQ-LPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEEN- 335
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
T+++ P L V+ A G H
Sbjct: 336 ------FTNQFVPILCSNFLKFTVQSVACGGCH 362
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P++CS F K +++++ACGG H L V+AT
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHML-------VFATPRPKE 373
Query: 101 GQLGISENI 109
++ I++ +
Sbjct: 374 SEMMINDEL 382
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGL + + +P A + + +CG HTL TE G +Y++G N G
Sbjct: 60 VFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEG 119
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G S + + + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K+
Sbjct: 120 QLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKE 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P K++ G + G+ S VT G++ ++G +G+LG L
Sbjct: 180 A--IYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPS 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
+ P+ + L G KVKI + G H+ + E VY FG ++ +F+
Sbjct: 229 DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFE-- 284
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P + L V CG HT V+T G LYT+G +G LG+G
Sbjct: 285 --TQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLG 332
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 26/256 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++CG HT+ +T G +Y G N++GQLG+ S +P + LK E VV S G +H
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAIS-KPTCVKALKSEKVVFASCGRNH 100
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
+ T G+LY G NS GQLGLG + + T + +S T KQ + G S
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGR-----TSFQEISFFNTQYKIKQLSAGSNTSA 155
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T GK+ WG G+LG +E+ TP+ I G + + G+ HS
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIY---------STPQKID--IGKPISWISCGYYHS 204
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEEVV-CGGYHTCVLTSGG 307
A + ++G +Y FG+ K+ ++P +S L ++V CGG HT +T
Sbjct: 205 AFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTE-K 263
Query: 308 ELYTWGSNENGCLGIG 323
E+YT+G + G LG G
Sbjct: 264 EVYTFGLGQFGQLGHG 279
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + IS G H+ +T +G+LY++G N+ GQLGL
Sbjct: 19 FGKSKFAENI-----PSKFWLKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGL-- 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+A I PT V+ L A+ G ++ T GK+ S G G+LG G S
Sbjct: 72 EAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTS 131
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + T IK+L +AG SA + +G+++++GD + ++ ++
Sbjct: 132 FQEISFFNTQYKIKQL--------SAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYS 183
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P I + CG YH+ +T GELYT+G ENG LG+
Sbjct: 184 TPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGL 226
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEK----HSLKALACGGAHTLFLTETGCVYATGL 97
+WG+ G+LGL + + S +K + ++CG H+ F+T+ G +Y G
Sbjct: 165 MWGDNSEGQLGL------EKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGE 218
Query: 98 NDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ G+LG+ S+ + +P R+SGL +V +S G H+ A+T + E+Y +G GQLG
Sbjct: 219 PENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVT-EKEVYTFGLGQFGQLG 277
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + +P V+ L+ G + +T G + ++G G G+LG G+E+
Sbjct: 278 HGTFIFET-QLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEEN- 335
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
T+++ P L V+ A G H
Sbjct: 336 ------FTNQFVPILCSNFLKFTVQSVACGGCH 362
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P++CS F K +++++ACGG H L V+AT
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHML-------VFATPRPKE 373
Query: 101 GQLGISENI 109
++ I++ +
Sbjct: 374 SEMMINDEL 382
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 123/285 (43%), Gaps = 17/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G LG G+ P+ ++ A+A G H+L +T G A G N FGQ
Sbjct: 77 WGDNKDGELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQ 136
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S P+ + V I+ G HS A+T G WG N G+LG G
Sbjct: 137 LGDGSTTDSS-TPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTT 195
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V+ +G A G S+A+T G VL+WG G+LG G
Sbjct: 196 RRDTPV--DVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGT-------- 245
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T TP + G V AAG LHS + G + +G+ + ++ ++ P
Sbjct: 246 -TTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDGTTTNSSTP 304
Query: 282 SLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ LP S + G H+ +TS G WG N++G LG G
Sbjct: 305 IAV-NLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDG 348
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 120/286 (41%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +G+LG GS P+ ++ A+A G H+L +T G A G ND G+
Sbjct: 129 WGNNLFGQLGDGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGE 188
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG P+ + V I+ G HS A+T G + WG NS+GQLG G
Sbjct: 189 LGDGTTTRRD-TPVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGTTT 247
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
PI V+ +G A G S+AVT G +L+WG G+LG G
Sbjct: 248 DSSTPI--AVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDGT-------- 297
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T+ TP + + G HS + G +GD D +G
Sbjct: 298 -TTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDN--DDGQLGDGTTTNSS 354
Query: 282 SLIS-KLP---YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ I+ LP G H+ +T+ G + WG+N +G LG G
Sbjct: 355 TPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLGDG 400
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG G+ + P+ + ++ A+ G H+L +T G A G ND GQ
Sbjct: 285 WGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQ 344
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S P+ ++ V + G HS A+T G + WG NS+G+LG G
Sbjct: 345 LGDGTTTNSS-TPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLGDGTTT 403
Query: 162 AKVIPI 167
PI
Sbjct: 404 NSSTPI 409
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 65/172 (37%), Gaps = 21/172 (12%)
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-----VLSWGAGGSGRLGHGQE 214
+A +V+ T CL+ T L +VA G + VL+WG G LG G
Sbjct: 34 RAGRVV---TGAFCLALAVTLAQTLSVSPTVAQNGPSRDASDTVLAWGDNKDGELGDGT- 89
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+T TP + G + AAG HS + G +G+ ++
Sbjct: 90 --------TTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQLGDGS 141
Query: 275 GNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P + LP V G H+ +TS G WG N+ G LG G
Sbjct: 142 TTDSSTPIAV-DLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDG 192
>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
Length = 882
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 141/301 (46%), Gaps = 36/301 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKM--LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ L +G RP L+ SE V+ CG YH VLTS E++TWG NG LG
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384
Query: 323 G 323
G
Sbjct: 385 G 385
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG+++ + G H+A I G+++ FGD + + + P + L
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHG 282
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E+R +P ++ + +ACG + T+ LT +G V+ G + +GQ
Sbjct: 271 WGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQ 330
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N+ P + + V+QI+ G +H + +T E++ WGK +NG+LG G
Sbjct: 331 LG---NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDI 387
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT VE L + A G + A+
Sbjct: 388 EDR--KVPTTVEALRDRAVRHIACGANFTAAI 417
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 135/265 (50%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKNGGVFTFGAGSCGQLG 275
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VTAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L + GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T +G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT+ G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 145/285 (50%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG +G+ G+GS P V ++K +ACGG H++FL E G VY GLN
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E+ G +P I L + +V ++ G HS A++ G+++ WG S+GQLGL
Sbjct: 64 GQLG-HESEGS--KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ +K L+G+ + AAG HS + +G V+ +G + ++ +
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL S++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 130/267 (48%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P + A + +ACG +H++ L++ G V++ G GQLG++ P I
Sbjct: 74 KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++QIS G H A+ DG+ + WG+NS GQLGLGK+ P +V+ L GI
Sbjct: 134 LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS-PQRVKSLDGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG SG+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER---------DRESPCHVKLLRSQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGR 303
Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIG 323
+HT + S G +Y +G G LG G
Sbjct: 304 HHTLAFVPSSGMIYAFGCGTRGQLGTG 330
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG S+ P + + L +A GGAH+ L+ +G V+ G N G
Sbjct: 161 WGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDERDRE-SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNV 335
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G HH+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 133/265 (50%), Gaps = 17/265 (6%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A +WG G G LG+ + P A + + ACG A TLF+ E+G VYA G N+
Sbjct: 265 AYVWGRGIDGSLGVEG-DKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNE 323
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLGI N S EP ++ L + +V+I+ G H+ A++ G LY WG +S+GQLG+G+
Sbjct: 324 HGQLGIGSNEAMS-EPTLVTNLPERIVRIACGNSHAVALSETGRLYAWGAHSSGQLGVGE 382
Query: 160 KAAKVIPIPTKVECLSGIFTKQAA---LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ P +VE S + A G ++ ++ G + ++G+G G+LG
Sbjct: 383 PLEDRLS-PVRVE--SNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLG------ 433
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG L + ++ TP + EG K + G SA + + G++Y +G A + + +G
Sbjct: 434 -LGPLATKNQATPAALPNPEGRKYTAISCGQDISAAVSDRGKIYTWGSGASNALGLPDGR 492
Query: 277 HARRPSLISKLP--YSEEVVCGGYH 299
P+LI + V CG +H
Sbjct: 493 TKYAPTLIESMADKRCRTVACGFFH 517
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 110/210 (52%), Gaps = 12/210 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN ++G+LG+GS E+ P + + + ++ +ACG +H + L+ETG +YA G + GQL
Sbjct: 320 GNNEHGQLGIGSNEAMSEPTLVTNLPERIVR-IACGNSHAVALSETGRLYAWGAHSSGQL 378
Query: 104 GISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G+ E + L P+R+ ++ +V + G +H+ ++ G LY +G + GQLGLG A
Sbjct: 379 GVGEPLEDRLSPVRVESNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLGLGPLA 438
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K P + G + G + S AV+ GK+ +WG+G S+ LG
Sbjct: 439 TKNQATPAALPNPEGRKYTAISCGQDISAAVSDRGKIYTWGSGA---------SNALGLP 489
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++Y P LI+ + + + A GF H A
Sbjct: 490 DGRTKYAPTLIESMADKRCRTVACGFFHMA 519
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 133/288 (46%), Gaps = 23/288 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA-TGLNDFG 101
WG G G LG G + P V A H +K L G HT+ L +G VY+
Sbjct: 164 WGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGLGGR 223
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
E ++ PLR++GL+ ++ I+ +HS A+ +GE Y+WG+ +G LG+ G
Sbjct: 224 LGQGRERDRFT--PLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGRGIDGSLGVEGD 281
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K PT++ L G AA G ++ V G+V + G G+LG G ++
Sbjct: 282 KHVS----PTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAM-- 335
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P L+ L V+I A G H+ + E GR+Y +G + ++ E R
Sbjct: 336 -------SEPTLVTNLPERIVRI-ACGNSHAVALSETGRLYAWGAHSSGQLGVGEPLEDR 387
Query: 280 -RPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + ++V CGG HT +L++ G LY +GS G LG+G
Sbjct: 388 LSPVRVESNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLGLG 435
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 65/172 (37%), Gaps = 46/172 (26%)
Query: 197 KVLSWGAGGSGRLGHGQES---------SILGF--------------------------- 220
V +WG G G LGHG+E ++LG
Sbjct: 160 DVYTWGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLG 219
Query: 221 -------LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
R +TP + L G + A HS + +NG Y++G R +D L
Sbjct: 220 LGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWG-RGIDGSLGV 278
Query: 274 EGNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
EG+ P+ I L V CG T + GE+Y G+NE+G LGIG
Sbjct: 279 EGDKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIG 330
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 138/283 (48%), Gaps = 22/283 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS+ + R V + ++A G AH+L L V+ G N+ GQ
Sbjct: 72 WGGNGSGQLGTGSVSFQ-RVVAQQVPGLTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQ 130
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G N+ P ++ GL +VV ++ G HS A+ DG ++ WG N GQLG G +
Sbjct: 131 VGDGTNVDRP-TPQKVPGLS-DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGH--S 186
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P +V L+G+ A GF+ S+AV G V +WGA GSG+LG G L
Sbjct: 187 QPGPSPAQVVGLTGVVALAA--GFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRL---- 240
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + +L+GV AG H+ + +G V+ +G + +M +G RPS
Sbjct: 241 -----APTQVSQLQGVSA--VTAGLYHALALRSDGTVWAWGSNSSGQM--GDGTWTDRPS 291
Query: 283 --LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + ++ V + VL G ++ WG N G LGIG
Sbjct: 292 PVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIG 334
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 41/291 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ ESR P+ + ++ A+A HTL L G V+A G N FGQ
Sbjct: 1128 WGGNADGQLGDGTTESRATPITVAGLG--AMVAVAPAARHTLALRSDGTVWAWGDNTFGQ 1185
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N +L P+++ GL+K V I+ G +HS A+ DG ++ WG N GQLG G A
Sbjct: 1186 LGDGSNTRRTL-PVQVVGLEK-VTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDA 1243
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG----------GKVLSWGAGGSGRLGHG 212
+ +PT++ LG + +VAV GG G + + G G+LG G
Sbjct: 1244 RA--VPTRM------------LGLDGAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEG 1289
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
T+ +P + EL+ +V+ AG HS + E+G V+ +G ++
Sbjct: 1290 T---------FTNRLSPFQVVELD--QVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGD 1338
Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R P+ + L V G HT + G E + WG N +G LG G
Sbjct: 1339 GTVTTRRVPAPVPGLTAIASVGAGTSHTFAV--GSETWAWGRNSHGQLGTG 1387
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 124/264 (46%), Gaps = 20/264 (7%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P S + +A G H+L++T+ G V+A G N GQLG + ++ GL
Sbjct: 39 PAARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGL 98
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+V I+ G HS A+ D ++ WG N+ GQ+G G + P P KV LS +
Sbjct: 99 -TDVTSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDR--PTPQKVPGLSDVVA-- 153
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G S+A+ G V +WG+ G+LG G S +P + L GV
Sbjct: 154 VAAGEFHSLALRADGTVWAWGSNFYGQLGRGH---------SQPGPSPAQVVGLTGVVAL 204
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYH 299
AAGF S + +G V+ +G ++ +G + +R P+ +S+L V G YH
Sbjct: 205 --AAGFDFSLAVRSDGTVWAWGANGSGQL--GDGTYIQRLAPTQVSQLQGVSAVTAGLYH 260
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
L S G ++ WGSN +G +G G
Sbjct: 261 ALALRSDGTVWAWGSNSSGQMGDG 284
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G S+ P + ALA G +L + G V+A G N GQ
Sbjct: 173 WGSNFYGQLGRG--HSQPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAWGANGSGQ 230
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I L P ++S L+ V ++ G +H+ A+ DG ++ WG NS+GQ+G G
Sbjct: 231 LGDGTYI-QRLAPTQVSQLQG-VSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTD 288
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V+ S K A S+ + G V +WG G+LG G
Sbjct: 289 R----PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIG---------- 334
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ +P ++ V AAG H+ + +G ++ +G A ++ P
Sbjct: 335 -TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPE 393
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++++L V G +H+ S G ++TWG N NG LG G
Sbjct: 394 VVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDG 434
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG GS R PV EK + A+A G H+L + E G V+A G N FGQ
Sbjct: 1178 WGDNTFGQLGDGSNTRRTLPVQVVGLEK--VTAIAAGSYHSLAVREDGTVWAWGYNVFGQ 1235
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P R+ GL V ++ G +HS + DG L+ G NS+GQLG G
Sbjct: 1236 LGDGTMDARAV-PTRMLGLDGAVA-VAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTN 1293
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P +V L + T +A G SVA+ G V +WG G G+LG G
Sbjct: 1294 RLSPF--QVVELDQVRTVRA--GGYHSVALREDGTVWTWGHNGQGQLGDGT--------- 1340
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ P + L + AG H+ + + +G + ++ + + P+
Sbjct: 1341 VTTRRVPAPVPGL--TAIASVGAGTSHTFAVGS--ETWAWGRNSHGQLGTGDSSDRLEPT 1396
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L+ L + V+ GG + + G +WG+N +G LGIG
Sbjct: 1397 LVKGLHGVKSVLAGGDFSVAQGADGSAMSWGTNVHGTLGIG 1437
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G G+LG GS E P V + + ++A G H++ G V+ G N GQ
Sbjct: 373 WGHGATGQLGHGSSERMLSPEVVTRLSN--VASVASGSFHSVAALSDGSVWTWGRNTNGQ 430
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+R+ GL VV +S HHS A+ DG ++ WG+N+ GQ+G G
Sbjct: 431 LGDGTTTERHL-PVRVPGLSG-VVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKD 488
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +VE LS + K A G VA+ G V +WG G+G+LG G
Sbjct: 489 RASP--ARVEGLSSV--KALASGGSHMVALRTDGTVWTWGYNGAGQLGDGT--------- 535
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P + L GV AAG S + +G V+ +GD ++ G P
Sbjct: 536 TTDRRAPVQVTGLSGVTS--VAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRASPV 593
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L ++ G H + G ++ WG N G +G G
Sbjct: 594 QVTGLTRVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDG 634
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 128/290 (44%), Gaps = 32/290 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLND 99
WG G+LG G+L R S E L +A G AH L +++ G V+A G N
Sbjct: 873 WGANGSGQLGDGTLGDR-----ASPLEVKGLAGIATGVMGEAHALVVSQDGTVWAWGANG 927
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG S P+R++GL + +S G +S A+ DG ++ WG N +GQLG G
Sbjct: 928 RGQLGDGTTT-SSASPVRVAGLSA-AMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGT 985
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A+ P P V+ L+ + K G VAV G V WGA G++G G
Sbjct: 986 NVARTTPKP--VQDLADV--KAVTAGAHHVVAVRHDGTVWGWGANAFGQVGDGTH----- 1036
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F R L+ +E +AG HS + + R +G ++ E +
Sbjct: 1037 FWRFRPVRVEGLLNAVE------TSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSL 1090
Query: 280 RPSLISKLPYSEEVVCG------GYHTCVLTSGGELYTWGSNENGCLGIG 323
P + KLP S+ +V H L + G + TWG N +G LG G
Sbjct: 1091 EPVGV-KLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDG 1139
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG+ PV + + L+ G AH+L + G V A G N GQ
Sbjct: 723 WGYNRFGQLGLGAAGWSSLPVQVRGLGQG--RRLSAGRAHSLLVRADGTVLAWGQNTSGQ 780
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+ L S G HS + DG ++ WG NS GQLG G +
Sbjct: 781 LGDGSTT-HRASPVLARNLPCARA-ASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTS 838
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P KVE L G+ A G + S+ + G V +WGA GSG+LG G LG
Sbjct: 839 RA--YPAKVEGLWGVVAVLA--GGDSSMVLRADGTVWTWGANGSGQLGDG----TLG--- 887
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+P +K L G+ + G H+ + ++G V+ +G ++ + P
Sbjct: 888 --DRASPLEVKGLAGIATGV--MGEAHALVVSQDGTVWAWGANGRGQLGDGTTTSSASPV 943
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + V G ++ + G +++WG+N++G LG G
Sbjct: 944 RVAGLSAAMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDG 984
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 124/283 (43%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P S + + A+ G H L L G V+A G N GQ
Sbjct: 223 WGANGSGQLGDGTYIQRLAPTQVSQLQ--GVSAVTAGLYHALALRSDGTVWAWGSNSSGQ 280
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+G P++++ + K V G S + DG ++ WG NS GQLG+G
Sbjct: 281 MGDGTWTDRP-SPVQVTSIARAKAVAAQDAG---SLVLLDDGGVFAWGLNSQGQLGIGTT 336
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A P+P +V L G T AA G + +V + G + +WG G +G+LGHG +L
Sbjct: 337 ADS--PLPVRVRGL-GAVTSLAA-GTQHAVVLRADGTLWTWGHGATGQLGHGSSERML-- 390
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+P ++ L V A+G HS +G V+ +G ++
Sbjct: 391 -------SPEVVTRLS--NVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHL 441
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V G+H+ L S G ++ WG N G +G G
Sbjct: 442 PVRVPGLSGVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDG 484
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 134/330 (40%), Gaps = 67/330 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G++G G+ R PV ++ + KA+A A +L L + G V+A GLN GQ
Sbjct: 273 WGSNSSGQMGDGTWTDRPSPVQVTSIAR--AKAVAAQDAGSLVLLDDGGVFAWGLNSQGQ 330
Query: 103 LGISENIGYSLEPLRISGL----------------------------------------- 121
LGI L P+R+ GL
Sbjct: 331 LGIGTTADSPL-PVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERM 389
Query: 122 -KKEVV-------QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
EVV +++G HS A DG ++ WG+N+NGQLG G + +P+ +V
Sbjct: 390 LSPEVVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPV--RVPG 447
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
LSG+ + A+ S A+ G V WG G++G G + +P ++
Sbjct: 448 LSGVVSVSAS--GHHSFALRSDGTVWGWGRNAQGQMGDGT---------TKDRASPARVE 496
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
L VK A+G H + +G V+ +G ++ R P ++ L V
Sbjct: 497 GLS--SVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV 554
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G Y + L + G ++ WG G LG G
Sbjct: 555 AAGAYFSLALRTDGTVWAWGDGFEGQLGDG 584
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 26/287 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDF 100
WG +G++G G+ R+RPV L A+ + G H+L L + G +++
Sbjct: 1023 WGANAFGQVGDGTHFWRFRPVRVEGL----LNAVETSAGEQHSLALLGDERALSWGSHEY 1078
Query: 101 GQLGISENIGYSLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQLG +E+ G SLEP+ + S + V +S + H++A+ DG + WG N++GQLG
Sbjct: 1079 GQLGDAES-GPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLG 1137
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ PI V L + A ++A+ G V +WG G+LG G
Sbjct: 1138 DGTTESRATPI--TVAGLGAMVAVAPAA--RHTLALRSDGTVWAWGDNTFGQLGDGS--- 1190
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+T P + LE KV AAG HS + E+G V+ +G ++ +
Sbjct: 1191 ------NTRRTLPVQVVGLE--KVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMD 1242
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L + V G YH+ +L G L+ G+N +G LG G
Sbjct: 1243 ARAVPTRMLGLDGAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEG 1289
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 25/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G G+LG G+ R PV + + + LA G AH L + + G V+A G N GQ
Sbjct: 573 WGDGFEGQLGDGAGVQRASPVQVTGLTR--VVKLAAGAAHGLAVRDDGTVWAWGDNTEGQ 630
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + +++ GL V + G +HS A+ DG L WG N+ GQ G G
Sbjct: 631 MG-DGSWSDRFRAVQVYGLTG-VSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTP 688
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--SSILGF 220
+V+ V LSGI K + +AV G +L+WG G+LG G SS+
Sbjct: 689 RVVA--GAVPGLSGI--KLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL--- 741
Query: 221 LRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P ++ L +G ++ +AG HS + +G V +G ++ H
Sbjct: 742 --------PVQVRGLGQGRRL---SAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRA 790
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L LP + G H+ VL G +++WG N G LG G
Sbjct: 791 SPVLARNLPCARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDG 834
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TETGCVYATGLNDFG 101
WG+ G+LG G++ +R P ++ ++ G +HT + +ET +A G N G
Sbjct: 1328 WGHNGQGQLGDGTVTTRRVPAPVPGLT--AIASVGAGTSHTFAVGSET---WAWGRNSHG 1382
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ LEP + GL V + G S A DG WG N +G LG+G
Sbjct: 1383 QLGTGDS-SDRLEPTLVKGLHG-VKSVLAGGDFSVAQGADGSAMSWGTNVHGTLGIGLPG 1440
Query: 162 AKVIP 166
+ +P
Sbjct: 1441 QRTVP 1445
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 10/270 (3%)
Query: 47 DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS 106
D+ LE P E + ++CG H+L + G V+A G GQLG
Sbjct: 22 DFMPPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTG 81
Query: 107 ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
E G + P +I L +++Q+S G +HS A++ G+++ WGKNS GQLGLGK+
Sbjct: 82 EVKGINFTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQ- 140
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P +V L GI Q A G S A++ G WG +G+L + G
Sbjct: 141 DSPQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLA------LSGNNVPVQ 194
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
Y PR I L + V + G+ H+A + +NG+V+ FGD + ++ R P L+
Sbjct: 195 SYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVE 254
Query: 286 KLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
++ ++ CG YHT + + G++ ++G
Sbjct: 255 RIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 284
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 21/215 (9%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+LE LR+S +S G HS A+ G ++ WG S GQLG G+ + P K+
Sbjct: 42 TLETLRVS-------LVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGE-VKGINFTPKKI 93
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ L+GI Q + G S+A++ GG+V SWG G+LG G+E S+ +P+
Sbjct: 94 KTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFP--------SQDSPQR 145
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP 288
++ LEG+ + AAG HS + +G + +G+ + ++ N + +P I L
Sbjct: 146 VRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALR 205
Query: 289 Y--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ CG HT VLT G+++T+G N G LG
Sbjct: 206 NLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLG 240
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 26/246 (10%)
Query: 24 LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAH 82
L +C R R FA WG G G+LG G ++ + P + ++CG H
Sbjct: 59 LAVCHR------GRVFA--WGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYH 110
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD 141
+L L+E G V++ G N GQLG+ + P R+ L+ + Q++ G HS A++V
Sbjct: 111 SLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVS 170
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
G + WG NS GQL L + +P+ P + L + + G+E + +T GK
Sbjct: 171 GTSFGWGNNSAGQLAL---SGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGK 227
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V ++G G+LGH + G P+L++ ++G+ +I + A + G
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRG---------PQLVERIDGLVSQIDCGSYHTLAYVYTTG 278
Query: 258 RVYIFG 263
+V FG
Sbjct: 279 QVVSFG 284
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P + L + + G E S+AV G+V +WGAG G+LG G+ I +
Sbjct: 37 PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGI--------NF 88
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSL 283
TP+ IK L G+K+ + G HS + E G+V+ +G + ++ F + +R
Sbjct: 89 TPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRS 148
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +P ++ V GG H+ L+ G + WG+N G L +
Sbjct: 149 LEGIPLAQ-VAAGGAHSFALSVSGTSFGWGNNSAGQLALS 187
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLTVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN +G L +
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALS 216
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN---KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G++ S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ ++ P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 EDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HGREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 DFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGHG+E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHGREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL E R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLTVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN +G L +
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALS 216
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 142/285 (49%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+ G+G+ P C S+K +ACGG H +FL E G VY GLN
Sbjct: 4 WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTK 63
Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E G +P +I L + ++ ++ G HS A++ G+L+ WG S+GQLGL
Sbjct: 64 GQLG-HEREGN--QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMT 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
V +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 121 TEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFP--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S+ +P+ ++ LEG+ + AAG HS + +G V+ +G ++ +
Sbjct: 177 -----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL +++VV CG HT VLT G ++T+G+ G LG
Sbjct: 232 SPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WGKNS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIG 323
HT + S G +Y +G G LG G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 136/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P ++S K+V++++ G +HS +T DGE+Y WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQA- 169
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
IP +V CL A G SVAV G+V WG G+G+LG G S
Sbjct: 170 -IPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A GF H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + +LE
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGNAGNEVLYTTINDEIFVLGTNCSGCLGLGD-VQSTLE 64
Query: 115 PLRISGL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N QLG G ++P
Sbjct: 65 PRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGS---------TANQAIPRRV 174
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + + G VY++G ++ + P ++ L
Sbjct: 175 TGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 235 VQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 150/290 (51%), Gaps = 24/290 (8%)
Query: 44 GNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGA---HTLFLTETGCVYATGLN 98
G G YGRLG G+ + R RP+ +A + + LA H+L LTETG V++ G
Sbjct: 3462 GEGSYGRLGQGNSDDLPRLRPI--TALQGFVVTELATSTGLEGHSLALTETGEVFSWGDG 3519
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
D+G+LG N P +I L+ ++V+ ++ G+ HS+ +TVDG+L+ +G + G+LGL
Sbjct: 3520 DYGKLG-HGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGL 3578
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
G + K +P +V L I + A G +V VT + V ++G G G+LG G
Sbjct: 3579 GNTSNK--KLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLG---- 3632
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
R+T++ TP+ + + +K G + + + G+VY G + + +
Sbjct: 3633 -----RTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQ 3687
Query: 277 HARR-PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
HA P + L + E++ G H LT G++++WG++ +G LG+G
Sbjct: 3688 HADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLG 3737
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 31/290 (10%)
Query: 46 GDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDFGQ 102
G+YGRLGLG ++ RP + + +K L HTL + G +Y+ G D+G+
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGK 500
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ L + ++ +VV QI+ GY HS+AIT +G LY WG G+LG G
Sbjct: 501 LGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNH 560
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ IPT V+ ++G+ + F ++ V S+GAG +G+LGHG S +
Sbjct: 561 SR--SIPTLVKDITGVGSVSCGSSFTVVIS-QDATTVWSFGAGDNGKLGHGDTSRV---- 613
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI--------FGDRAVDKMLFQ 273
Y P++I L+G+ ++ S + G+V++ +G ++ +
Sbjct: 614 -----YRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQADATFLVPK 668
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + +I ++ G H LT ++Y+WG+N +G G+G
Sbjct: 669 RLDEFQDLQII-------DIAVGDNHCLALTCDNDVYSWGNNASGQCGLG 711
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 13/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ E + RP A + +ACG H+ +T G ++ G +D G+
Sbjct: 3516 WGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGR 3575
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG+ L P +++ L+ +V+ I+ G +H+ +T D E ++ +G+ GQLGLG+
Sbjct: 3576 LGLGNTSNKKL-PAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLGRT 3634
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK+ P V+ S + K+ G ++A+T GKV S GH + + I
Sbjct: 3635 TAKM--TPQYVDAFSKLNIKKICCGARFTLALTKEGKVYS--------CGHNRCNGIFEV 3684
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
++Y P+ + L ++ AAG+ H+ + + G V+ +G+ ++ + R
Sbjct: 3685 DTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQRE 3744
Query: 281 PSLISKL 287
P LIS L
Sbjct: 3745 PCLISSL 3751
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 34 TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
T R +G G+YG+LGLG ++ P AF K ++K + CG TL LT+ G VY
Sbjct: 3612 TTDRESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVY 3671
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN 152
+ G N + + P ++ L ++ ++ I+ GY H+ A+T +G+++ WG +++
Sbjct: 3672 SCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTD 3731
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLGLG+ + P + L G +Q + G S A T A S R
Sbjct: 3732 GQLGLGQTLPQ--REPCLISSLQGKGIRQISAGHNHSAAWT--------VAPASIRKAMA 3781
Query: 213 QESSI-LGFLRSTSEYTPRLIKELEGVKVKI 242
SS+ LG E P + L G+ +++
Sbjct: 3782 TSSSLELGL----PERIPEIYGSLAGIDIQL 3808
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 22/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + ++ +A G H+ +T G +Y G D+G
Sbjct: 493 WGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYG 552
Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDG-ELYMWGKNSNGQLGL 157
+LG +N S I L K++ +S G + I+ D ++ +G NG+LG
Sbjct: 553 RLGHGDNHSRS-----IPTLVKDITGVGSVSCGSSFTVVISQDATTVWSFGAGDNGKLGH 607
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P + L G+ ++ + S+A+T G+V WG+G LG+GQ +
Sbjct: 608 GDTSR--VYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPC--LGYGQADA- 662
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
FL P+ + E + +++ A G H + + VY +G+ A
Sbjct: 663 -TFL------VPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNA 704
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G +RP V S + ++ + C +L LT G V+ G
Sbjct: 597 FGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPC-- 654
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + L P R+ + +++ I+ G +H A+T D ++Y WG N++GQ GLG
Sbjct: 655 LGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNN 714
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ V+ +P KV Q ++G S+A T
Sbjct: 715 SPVL-LPRKVTGFDNHVIYQISVGTSHSIAWTA 746
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 24/229 (10%)
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QL S L P ++ + +E+++ T ++ E Y WG +GQL ++
Sbjct: 3368 QLITSTKENEILPPWKL-AMDREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLA---ES 3423
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+++ PT S KQ G + + G VL+ G G GRLG G
Sbjct: 3424 GRLVLQPTLTSSFSK--AKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGN-------- 3473
Query: 222 RSTSEYTPRL--IKELEG-VKVKIAAAGFL--HSACIDENGRVYIFGDRAVDKMLFQEGN 276
S+ PRL I L+G V ++A + L HS + E G V+ +GD K+
Sbjct: 3474 ---SDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNSE 3530
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP I L + V CG H+ ++T G+L+T+G+++ G LG+G
Sbjct: 3531 RQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLG 3579
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 9/214 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG+GDYGRLG G SR P + + +++CG + T+ +++ V++ G D G
Sbjct: 546 WGDGDYGRLGHGDNHSRSIPTLVKDIT--GVGSVSCGSSFTVVISQDATTVWSFGAGDNG 603
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P IS L+ ++ ++ S A+T G++++WG S LG G+
Sbjct: 604 KLGHGDT-SRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWG--SGPCLGYGQA 660
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + +P +++ + A+G +A+T V SWG SG+ G G +S +
Sbjct: 661 DATFL-VPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLL 719
Query: 221 LRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACI 253
R + + +I ++ G IA CI
Sbjct: 720 PRKVTGFDNHVIYQISVGTSHSIAWTALPTDRCI 753
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGIC--KRWISSTLQRRFAALWGNGDYGRLGLGSLESR 59
LGR+ MT Y+ KL K C + ++ T + + + N G + + +
Sbjct: 3631 LGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHAD 3690
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+ P A + ++ +A G H L LT+ G V++ G + GQLG+ + + EP IS
Sbjct: 3691 YYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQR-EPCLIS 3749
Query: 120 GLK-KEVVQISTGYHHSSAITV 140
L+ K + QIS G++HS+A TV
Sbjct: 3750 SLQGKGIRQISAGHNHSAAWTV 3771
>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
Length = 907
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 141/301 (46%), Gaps = 36/301 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKM--LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ L +G RP L+ SE V+ CG YH VLTS E++TWG NG LG
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384
Query: 323 G 323
G
Sbjct: 385 G 385
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E+R +P ++ + +ACG + T+ LT +G V+ G + +GQ
Sbjct: 271 WGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQ 330
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N+ P + + V+QI+ G +H + +T E++ WGK +NG+LG G
Sbjct: 331 LG---NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDI 387
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT VE L + A G + A+
Sbjct: 388 EDR--KVPTTVEALRDRAVRHIACGANFTAAI 417
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG+++ + G H+A I G+++ FGD + + + P + L
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHG 282
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 26/284 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG G E + PV + + A+A G H+L L + G ++A G N++GQ
Sbjct: 271 WGNNYYGQLGNGKSEDSYDPVQVKNLK--DVVAIAAGENHSLALKKDGTIWAWGDNEWGQ 328
Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ISE + P++ LK +VV I+ G HS A+ DG ++ WG N GQLG G
Sbjct: 329 LGNSISEKL---CVPVQFKSLK-DVVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNS 384
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P+ +V L + A G S+A+ G V +WG G+LG+G
Sbjct: 385 IDSYVPV--QVRGLKDVVA--IATGNAHSLALKKDGTVWAWGNNEFGQLGNG-------- 432
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ S + P +K L+ V V IAA G HS ++G V+ +G+ ++ G + +
Sbjct: 433 -TNKSSFVPVQVKGLKDV-VAIAA-GSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQY 489
Query: 281 ---PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P + L V G H+ L G ++ WGSN +G LG
Sbjct: 490 YAVPVQVKGLKDVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLG 533
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 135/278 (48%), Gaps = 23/278 (8%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--I 105
Y +L G+ E PV + + A+A G H+L L + G V+A G N +GQLG
Sbjct: 226 YEQLRRGADEYSPVPVQVEGLK--DVVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGK 283
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
SE+ S +P+++ LK +VV I+ G +HS A+ DG ++ WG N GQLG ++ +
Sbjct: 284 SED---SYDPVQVKNLK-DVVAIAAGENHSLALKKDGTIWAWGDNEWGQLG--NSISEKL 337
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
+P + + L + A G E S+A+ G V SWG G+LG+G S
Sbjct: 338 CVPVQFKSLKDVVA--IAAGCEHSLALKKDGTVWSWGNNYYGQLGNG---------NSID 386
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
Y P ++ L+ V V IA G HS + ++G V+ +G+ ++ + P +
Sbjct: 387 SYVPVQVRGLKDV-VAIAT-GNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVPVQVK 444
Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + G H+ G ++ WG+NE G LG G
Sbjct: 445 GLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNG 482
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 143/287 (49%), Gaps = 29/287 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLND 99
WG+ ++G+LG S+ + +C + SLK A+A G H+L L + G V++ G N
Sbjct: 321 WGDNEWGQLG-NSISEK----LCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSWGNNY 375
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+GQLG +I S P+++ GLK +VV I+TG HS A+ DG ++ WG N GQLG G
Sbjct: 376 YGQLGNGNSID-SYVPVQVRGLK-DVVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGT 433
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P+ +V+ L + A G + S+A G V +WG G+LG+G G
Sbjct: 434 NKSSFVPV--QVKGLKDVVA--IAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSG----G 485
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + + P +K L+ V AAG +HS + ++G ++ +G +L + +
Sbjct: 486 YGQYYA--VPVQVKGLKDVVA--VAAGSVHSLALKKDGTIWAWGSN-YHGLLGNDIERSF 540
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS------NENGCL 320
P + L + G H+ VL G ++ WG NEN L
Sbjct: 541 VPVQVKGLKDVVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRL 587
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 136/280 (48%), Gaps = 20/280 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+ G + ES PV + + A+A G H+L L + G V+A G N GQ
Sbjct: 70 WGWNHWGQCG--TEESSIIPVKVKGLK--DVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQ 125
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + YS+ P+++ GL K+VV I+ G +S + DG ++ WG N + Q+ G +
Sbjct: 126 LGNRDAGEYSIVPVQVKGL-KDVVAIAAGDGYSLGLKKDGTVWCWGLNESIQVIDG--SN 182
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K +P +++ L + A G + S+A+ G V W + + ++ R
Sbjct: 183 KDFSVPFQIKGLKDVVA--IAAGKDYSLALKKDGTVWMW----EYKYNYYEQ-----LRR 231
Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
EY+P + ++EG+K +A AAG HS + ++G V+ +G+ ++ + + P
Sbjct: 232 GADEYSPVPV-QVEGLKDVVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDP 290
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L + G H+ L G ++ WG NE G LG
Sbjct: 291 VQVKNLKDVVAIAAGENHSLALKKDGTIWAWGDNEWGQLG 330
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 149/331 (45%), Gaps = 62/331 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN ++G+LG G+ +S + PV + + A+A G H+L + G V+A G N+FGQ
Sbjct: 421 WGNNEFGQLGNGTNKSSFVPVQVKGLK--DVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQ 478
Query: 103 LGI-SENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S G Y P+++ GLK +VV ++ G HS A+ DG ++ WG N +G LG +
Sbjct: 479 LGNGSGGYGQYYAVPVQVKGLK-DVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLGNDIE 537
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG------------------ 202
+ V P +V+ L + A G S+ + G V +WG
Sbjct: 538 RSFV---PVQVKGLKDVVA--IAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSV 592
Query: 203 --------------AGGSGRLGHGQESSI-------LGFLRSTSEYTPRLIK-ELEGVKV 240
AG LG ++ ++ G L ++ L+ +++G+K
Sbjct: 593 PVQIKGLKDVVAIAAGEHHSLGLKKDGTVWAWGDNFFGQLGNSPREKYSLVPVQVKGLKD 652
Query: 241 KIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE------- 292
+A A G HS I ++G V+ +G+ + ++ GN S +P +
Sbjct: 653 ILAIATGEWHSLAIKKDGTVWAWGENSTGQL----GNETSGKDKYSYVPVQVKGIKDVLA 708
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G YH+ L G ++ WG+N G LG G
Sbjct: 709 ISAGSYHSLALKKDGTVWGWGANARGQLGNG 739
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 121/255 (47%), Gaps = 27/255 (10%)
Query: 75 ALACGGAHTLFLTETGCVYA--TGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQIST 130
A+A G ++L L + G V+ N + QL G E YS P+++ GLK +VV I+
Sbjct: 199 AIAAGKDYSLALKKDGTVWMWEYKYNYYEQLRRGADE---YSPVPVQVEGLK-DVVAIAA 254
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G +HS A+ DG ++ WG N GQLG GK P+ +V+ L + A G S+
Sbjct: 255 GRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPV--QVKNLKDVVA--IAAGENHSL 310
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY--TPRLIKELEGVKVKIAAAGFL 248
A+ G + +WG G+LG+ S SE P K L+ V V I AAG
Sbjct: 311 ALKKDGTIWAWGDNEWGQLGN-----------SISEKLCVPVQFKSLKDV-VAI-AAGCE 357
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
HS + ++G V+ +G+ ++ + P + L + G H+ L G
Sbjct: 358 HSLALKKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKDVVAIATGNAHSLALKKDGT 417
Query: 309 LYTWGSNENGCLGIG 323
++ WG+NE G LG G
Sbjct: 418 VWAWGNNEFGQLGNG 432
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
E +S L+ ++QI+ G +HS A+ DG ++ WG N GQ G + + IP KV+
Sbjct: 37 ETTLLSKLENNIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTEESSI----IPVKVKG 92
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L + A G S+ + G V +WG+ G+LG+ R EY+ +
Sbjct: 93 LKDVVA--IAAGRYHSLTLKKDGTVWAWGSNKDGQLGN----------RDAGEYSIVPV- 139
Query: 234 ELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
+++G+K +A AAG +S + ++G V+ +G +++ P I L
Sbjct: 140 QVKGLKDVVAIAAGDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKDVVA 199
Query: 293 VVCGGYHTCVLTSGGELYTW 312
+ G ++ L G ++ W
Sbjct: 200 IAAGKDYSLALKKDGTVWMW 219
>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
Length = 907
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 141/301 (46%), Gaps = 36/301 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + ++ +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P + L A G + + +G+V+ G+
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328
Query: 268 DKM--LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ L +G RP L+ SE V+ CG YH VLTS E++TWG NG LG
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384
Query: 323 G 323
G
Sbjct: 385 G 385
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E+R +P ++ + +ACG + T+ LT +G V+ G + +GQ
Sbjct: 271 WGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVYGQ 330
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N+ P + + V+QI+ G +H + +T E++ WGK +NG+LG G
Sbjct: 331 LG---NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGDI 387
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT VE L + A G + A+
Sbjct: 388 EDR--KVPTTVEALRDRAVRHIACGANFTAAI 417
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H+S +T +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + PR
Sbjct: 126 LAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTD---------VGHWIPRR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG+++ + G H+A I G+++ FGD + + + P + L
Sbjct: 177 ISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHG 282
>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
GTPase regulator, partial [Callithrix jacchus]
Length = 817
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 155/321 (48%), Gaps = 27/321 (8%)
Query: 11 KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
K++ K D+ + G + + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 29 KFWFKNDVAVHLSCGDEHSAVVTGNNKLY--VFGSNNWGQLGLGSKSAVSKPTCVKALKP 86
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
+K ACG HTL TE G VYATG ND GQLG+ + + + + ++ Q+S
Sbjct: 87 EKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLS 146
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G + S+A+T DG L+MWG NS GQ+GL +P + G + G+ S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTI----GKPVSWISCGYYHS 202
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VT G++ +G +G+LG E +L R P+L+ E+ +++A G H
Sbjct: 203 AFVTTDGELYIFGESENGKLGLPNE--LLSNHR-----IPQLVPEIPEKVIQVACGG-EH 254
Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCV 302
S + E+ VY FG + +LF+ P ++ + + CG H +
Sbjct: 255 SVVLTEDA-VYTFGLGQFGQLGLGTLLFE----TSEPKVVENIGNKTISYISCGENHAAL 309
Query: 303 LTSGGELYTWGSNENGCLGIG 323
LT G +YT+G +G LG+G
Sbjct: 310 LTDNGLMYTFGDGRHGKLGLG 330
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ I+ENI P + V +S G HS+ +T + +LY++G N+ GQLGLG
Sbjct: 17 FGKSKIAENI-----PGKFWFKNDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+A + PT V+ L K AA G ++ T GG V + G G+LG G
Sbjct: 72 KSA--VSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTT 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F R + + IK+L +AG SA + E+GR++++GD + ++ +A
Sbjct: 130 FHRVSFFTSQHKIKQL--------SAGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNAC 181
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P ++ + CG YH+ +T+ GELY +G +ENG LG+
Sbjct: 182 VPHQVTIGKPVSWISCGYYHSAFVTTDGELYIFGESENGKLGL 224
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +C F K +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGCHMVVF 364
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 135/289 (46%), Gaps = 25/289 (8%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+LGLG ++ + H++K ++CG HT+ L + G +Y+ G ND+
Sbjct: 4 WGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGSNDY 63
Query: 101 GQLGISENIGY-----SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQ G N + E +RI+ + S G +H+ AI +Y WG NS+GQL
Sbjct: 64 GQTGRQRNNKRFARIDAFESMRITNVS------SNGANHNLAINDKNCIYAWGDNSDGQL 117
Query: 156 GLGKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ + K P +++ LS Q A G S+AV G V SWG+ G+LG
Sbjct: 118 GVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS- 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ S P+ I +L G + AAG HS I +G + +G + ++
Sbjct: 177 --------NVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGT 228
Query: 275 GNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ P+ +S L + CG HT VLT G ++T+G+ +G LG
Sbjct: 229 NDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLG 277
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 19/262 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFGQ 102
G+ DYG+ G R+ + AFE + ++ GA H L + + C+YA G N GQ
Sbjct: 59 GSNDYGQTGRQRNNKRFARI--DAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQ 116
Query: 103 LGISE-NIG-YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+++ N+ + P +I L K VVQ++ G HS A+ DG ++ WG N GQLG+
Sbjct: 117 LGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ V P ++ LSG + Q A G S+A+T G +L+WG G+LG G +L
Sbjct: 177 NVSSV--EPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVL- 233
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+P + L + AA G H+A + + G V+ FG + ++ +H
Sbjct: 234 --------SPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHC 285
Query: 280 RPSLISKLP--YSEEVVCGGYH 299
P ++ L ++ CG ++
Sbjct: 286 SPQMVVDLMGIVVTQITCGRFY 307
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGF 186
IS G +H+ + DG++Y G N GQ G + + +++ + T ++ G
Sbjct: 39 ISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKRF----ARIDAFESMRITNVSSNGA 94
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
++A+ + +WG G+LG + ++ F R TPR IK L V A G
Sbjct: 95 NHNLAINDKNCIYAWGDNSDGQLG-VTDQNLKQFYR-----TPRQIKSLSKFAVVQVACG 148
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLT 304
HS + +G V+ +G ++ + P I KL Y ++ GG H+ +T
Sbjct: 149 QSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAIT 208
Query: 305 SGGELYTWGSNENGCLGIG 323
+ G L TWG N G LG+G
Sbjct: 209 NSGALLTWGKNSFGQLGLG 227
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG+ S S P + +A GGAH+L +T +G + G N FGQ
Sbjct: 164 WGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQ 223
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N G L P +S L+ + + + G H++ +T +G ++ +G S+GQLG +
Sbjct: 224 LGLGTNDGV-LSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLS 282
Query: 162 AKVIPIPTKVECLSGIFTKQAALG 185
P V L GI Q G
Sbjct: 283 HHC--SPQMVVDLMGIVVTQITCG 304
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WGK GQLGLG I T V+ + K + G ++ + G++ S G+
Sbjct: 1 MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGS 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIF 262
G+ G + + F R I E +++ +++ G H+ I++ +Y +
Sbjct: 61 NDYGQTGRQRNNK--RFAR---------IDAFESMRITNVSSNGANHNLAINDKNCIYAW 109
Query: 263 GDRA------VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
GD + D+ L Q R+ +SK +V CG H+ + + G +++WGSN
Sbjct: 110 GDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVV-QVACGQSHSLAVINDGTVFSWGSNR 168
Query: 317 NGCLGI 322
G LGI
Sbjct: 169 YGQLGI 174
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 19/272 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 92 GCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG-NG 150
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P ++S + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A +
Sbjct: 151 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-- 208
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 209 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SG 259
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+G++V+ A G H+ + + G++Y +G + ++ ++ P+ +
Sbjct: 260 NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV 319
Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G++Y WG
Sbjct: 320 TVDKDRVVEIAACHSAHTSAAKTQSGQVYMWG 351
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 117/250 (46%), Gaps = 16/250 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L++TE V+ G+N G LG + I ++EP R+ L K++ +S G H
Sbjct: 70 AGNEVLYVTENDEVFVLGMNCSGCLGTGD-IQSTIEPKRLDSLCGKKIACLSYGSGPHVV 128
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE+Y WG N+ QLG G ++P L + A G S+ +T G
Sbjct: 129 LATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTN-LVNKKVIEVACGSHHSMVLTSDG 187
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + KV + A G + S + E
Sbjct: 188 EVYTWGYNNSGQVGSGS---------TANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVE 238
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
NG VY++G ++ + P I+ L + V CG HT VLT G++Y WG
Sbjct: 239 NGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG 298
Query: 314 SNENGCLGIG 323
+N G LG G
Sbjct: 299 ANSYGQLGTG 308
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 244 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYG 303
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 304 QLGTGNKSNQSY-PTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 356
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 357 --SVVLPHLTHFACTDDVF 373
>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 447
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 138/286 (48%), Gaps = 16/286 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG LG G+ E+ PV + +KA++ G +L L G V+A G N +GQ
Sbjct: 94 WGSNSYGELGDGTNENSIEPVQVAGLT--GVKAISAGKGFSLALKGDGSVWAWGSNTYGQ 151
Query: 103 LGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + SL P+++ GL+ VV IS G H A+ +G L+ WG+NS+G LG G
Sbjct: 152 LGKNPLSFMGSLTPIQVEGLEG-VVSISCGGSHCFALQENGVLWAWGENSHGILGDGTNE 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG----QESSI 217
++ P+ K++ + + ++AV G V +WG G+LG G +
Sbjct: 211 SQFKPVKPKIKDVKAFDAGE----LSHALAVKEDGSVWAWGFNYKGQLGTGGVSLSDQGR 266
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
+ R Y P +++ + K AAG HS + +G V+ +G + ++ G
Sbjct: 267 ISLGREADNYNPDIVRGVS--DAKAVAAGGSHSVALASDGSVWAWGSNSDGQLGLGHAGG 324
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ P+ + + + G YHT L G ++ WGSN +G LG
Sbjct: 325 SDVTSPTRVQGIEGVTAIAAGMYHTLALKGDGSVWAWGSNSDGQLG 370
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG-AHTLFLTETGCVYATGLNDFG 101
WG +G LG G+ ES+++PV + +KA G +H L + E G V+A G N G
Sbjct: 196 WGENSHGILGDGTNESQFKPV---KPKIKDVKAFDAGELSHALAVKEDGSVWAWGFNYKG 252
Query: 102 QLG-----ISENIGYSL-------EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
QLG +S+ SL P + G+ + ++ G HS A+ DG ++ WG
Sbjct: 253 QLGTGGVSLSDQGRISLGREADNYNPDIVRGVS-DAKAVAAGGSHSVALASDGSVWAWGS 311
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
NS+GQLGLG + PT+V+ + G+ A G ++A+ G G V +WG+ G+L
Sbjct: 312 NSDGQLGLGHAGGSDVTSPTRVQGIEGV--TAIAAGMYHTLALKGDGSVWAWGSNSDGQL 369
Query: 210 GHGQESS 216
G+ S+
Sbjct: 370 GNASFSA 376
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 47 DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS 106
D GR+ LG + P + KA+A GG+H++ L G V+A G N GQLG+
Sbjct: 263 DQGRISLGREADNYNPDIVRGVSD--AKAVAAGGSHSVALASDGSVWAWGSNSDGQLGLG 320
Query: 107 ENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G + P R+ G++ V I+ G +H+ A+ DG ++ WG NS+GQLG +A
Sbjct: 321 HAGGSDVTSPTRVQGIEG-VTAIAAGMYHTLALKGDGSVWAWGSNSDGQLGNASFSAASS 379
Query: 166 PIP 168
P+P
Sbjct: 380 PVP 382
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 88/206 (42%), Gaps = 27/206 (13%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
L + V I+ S A+ DG ++ WG+ +G P +V+ +SG+ +
Sbjct: 26 LSPQAVAIAASNCTSVALLEDGSVWQWGRVCDG---------VEWSAPQRVD-ISGV--R 73
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G +A+ G G V +WG+ G LG G E+SI P + L GVK
Sbjct: 74 QIAAGSGHVLALKGDGTVWAWGSNSYGELGDGTNENSI----------EPVQVAGLTGVK 123
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGG 297
A GF S + +G V+ +G ++ + + P + L + CGG
Sbjct: 124 AISAGKGF--SLALKGDGSVWAWGSNTYGQLGKNPLSFMGSLTPIQVEGLEGVVSISCGG 181
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
H L G L+ WG N +G LG G
Sbjct: 182 SHCFALQENGVLWAWGENSHGILGDG 207
>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
Length = 667
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 140/282 (49%), Gaps = 20/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
WG+ + G+LG+G+ + P S +KA++ G G H++ LTE G V+ G ND G
Sbjct: 108 WGSNENGQLGIGTTADKNVPTPVSGLS--GIKAISGGLGYHSMALTENGTVWTWGKNDNG 165
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + + P+ + GL +V I+ G ++S A+ DG ++ WG N NG+LG G
Sbjct: 166 ELGNGTTVQQN-SPVLVIGLS-DVTAIAAGGYYSLALKSDGTIWAWGANGNGELGDGTIV 223
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K P+ +V LS + A G S+A+ G V +WG G LG G
Sbjct: 224 DKHTPV--QVSGLSDVIAITA--GGSHSLAIKQDGTVWAWGINMYGTLGDGTR------- 272
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P ++ L+ +K A G HS +D+ G V+ +GD + ++ + P
Sbjct: 273 --TNRTIPVKVRNLQ--HIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRTTP 328
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + ++ GG+H+ L G ++ WG N +G +G G
Sbjct: 329 EQLTGIEHVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDG 370
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 139/285 (48%), Gaps = 24/285 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD G++G + +R PV + + + G T+ L G V+ G N+ G
Sbjct: 57 VWGQGDRGQIGDAAWNARNTPVQARGL--NDVMDIHTGVRSTMALRSDGTVWTWGSNENG 114
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLGI ++ P +SGL + IS G +HS A+T +G ++ WGKN NG+LG G
Sbjct: 115 QLGIGTTADKNV-PTPVSGLSG-IKAISGGLGYHSMALTENGTVWTWGKNDNGELGNGTT 172
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V LS + T AA G+ S+A+ G + +WGA G+G LG G
Sbjct: 173 VQQNSPV--LVIGLSDV-TAIAAGGY-YSLALKSDGTIWAWGANGNGELGDGT------- 221
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
++TP + L V + I A G HS I ++G V+ +G + +G R
Sbjct: 222 --IVDKHTPVQVSGLSDV-IAITAGGS-HSLAIKQDGTVWAWGINMYGTL--GDGTRTNR 275
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + + + GG+H+ L G ++ WG N G LG+G
Sbjct: 276 TIPVKVRNLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLG 320
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 118/248 (47%), Gaps = 16/248 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
L G HT L +G VY G D GQ+G + + P++ GL +V+ I TG +
Sbjct: 39 LVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARN-TPVQARGLN-DVMDIHTGVRST 96
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N NGQLG+G A K +P P V LSGI LG+ S+A+T
Sbjct: 97 MALRSDGTVWTWGSNENGQLGIGTTADKNVPTP--VSGLSGIKAISGGLGY-HSMALTEN 153
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG +G LG+G + + +P L+ L V IAA G+ +S +
Sbjct: 154 GTVWTWGKNDNGELGNGT---------TVQQNSPVLVIGLSDV-TAIAAGGY-YSLALKS 202
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G ++ +G ++ P +S L + GG H+ + G ++ WG N
Sbjct: 203 DGTIWAWGANGNGELGDGTIVDKHTPVQVSGLSDVIAITAGGSHSLAIKQDGTVWAWGIN 262
Query: 316 ENGCLGIG 323
G LG G
Sbjct: 263 MYGTLGDG 270
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK-VECLSGIFTKQAALG 185
++ GY+H++++ G++Y+WG+ GQ+G A+ P+ + + + I T G
Sbjct: 38 KLVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLNDVMDIHT-----G 92
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
++A+ G V +WG+ +G+LG G + + P + L G+K
Sbjct: 93 VRSTMALRSDGTVWTWGSNENGQLGIGT---------TADKNVPTPVSGLSGIKAISGGL 143
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
G+ HS + ENG V+ +G ++ P L+ L + GGY++ L S
Sbjct: 144 GY-HSMALTENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSDVTAIAAGGYYSLALKS 202
Query: 306 GGELYTWGSNENGCLGIG 323
G ++ WG+N NG LG G
Sbjct: 203 DGTIWAWGANGNGELGDG 220
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG LG G+ +R PV + +KA+A GG H+L L + G V+ G N GQ
Sbjct: 259 WGINMYGTLGDGTRTNRTIPVKVRNLQH--IKAIAGGGHHSLALDQEGNVWGWGDNSRGQ 316
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ N + P +++G++ V+ I+ G HS+A+ DG ++ WG NS+GQ+G G +
Sbjct: 317 LGLGHNSSRT-TPEQLTGIE-HVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRND 374
Query: 163 KVIPIPTK 170
+ P TK
Sbjct: 375 RNAPALTK 382
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 29/277 (10%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLG 104
G LGLG ++S P + S K +AC G H + T G V+ G N + QLG
Sbjct: 76 GCLGLGDIQSTIEP---RKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG 132
Query: 105 ISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+ + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A
Sbjct: 133 -NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN 191
Query: 163 KVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 192 Q--PIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGS-------- 241
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
S ++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 242 -SGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQS 298
Query: 281 ---PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 299 YPTPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 27/295 (9%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
NG+ G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 NGESGKPIRATLSSLKMLDVGKWPMFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + I ++EP ++ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-IQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + KV + A G + S + + G V+++G ++
Sbjct: 187 GS---------TANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P I+ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 238 GLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPYLTHFSCTDDVF 357
>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
Length = 432
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 144/288 (50%), Gaps = 26/288 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA ++H + ++ CG HT+ +++ VY+ G DFG
Sbjct: 35 WGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFG 94
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L ++ QI+ G H A+T+DGE+ WG+N NGQLGLG
Sbjct: 95 RLG-HGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNT 153
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + W G + G + L F
Sbjct: 154 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWD-GKIWKFGISDRNDRL-F 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
L+ EY +++++G ++ + L S +Y++ ++ ++ G
Sbjct: 210 LK---EYLC-CVRDVDGAVMQPHISFLLWSI-------IYLWMEQIWPTRTWRLGG---S 255
Query: 281 PSLISKLPYSEEV----VCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P ++ S + GG+ HT LTS G+LY WG N+ G +G+G
Sbjct: 256 PCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVG 303
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 64/263 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ E P AFE +K +A G HT +TE G +Y +
Sbjct: 140 WGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWD-GKIWK 198
Query: 103 LGISE------------------------NIGYSL---------------------EPLR 117
GIS+ +I + L P
Sbjct: 199 FGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYLWMEQIWPTRTWRLGGSPCF 258
Query: 118 ISGLKKEVV----QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
++ K+ QIS G+ H+ +T DG+LY WG N GQ+G+G + P+ +
Sbjct: 259 LTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD 318
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ Q + G+ ++AVT V +WG G +G+LG G+ S +P +I
Sbjct: 319 DQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE---------SLDRNSPNII- 366
Query: 234 ELEGVKVKIAAAGFLHSACIDEN 256
E + V A+ + S+ D +
Sbjct: 367 --EALSVDGASGQHIESSSFDPS 387
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 14/199 (7%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ ++V+ IS G HS A+ + WG+ +GQLG G A+ PT++ L
Sbjct: 5 EVTPPPRKVLIISAGASHSVALLSGEVVCSWGRGEDGQLGHGD--AEDRSSPTQLSALDE 62
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + +VA + +V SWG G GRLGHG S + +TP IK L
Sbjct: 63 HQIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 113
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
GV +K A G H + +G V +G ++ + P I + V
Sbjct: 114 HGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMV 173
Query: 294 VCGGYHTCVLTSGGELYTW 312
G HT +T G+LY W
Sbjct: 174 AAGAEHTAAVTEDGDLYGW 192
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+V P P KV +S G SVA+ G V SWG G G+LGHG
Sbjct: 5 EVTPPPRKVLIISA--------GASHSVALLSGEVVCSWGRGEDGQLGHGD--------- 47
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG-RVYIFGDRAVDKMLFQEGNHARRP 281
+ +P + L+ ++ G H+ ++ VY +G ++ H
Sbjct: 48 AEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRL-----GHGNSS 102
Query: 282 SLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + LP +++ CG H +T GE+ +WG N+NG LG+G
Sbjct: 103 DLFTPLPIKALHGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLG 151
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 146/288 (50%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLGLG ++ P +++ ++ HTL +T G V++ G D+
Sbjct: 426 GKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDY 485
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG N P I G L K VV +S GY HS+A+T DGELY WG+ G+LG
Sbjct: 486 GKLGHG-NSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHS 544
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSI 217
++ +PT V+ +SG+ Q A G ++AV G+++ S+G G +G+LGHG + +
Sbjct: 545 DSHSRN--VPTLVKDISGV--GQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRV 600
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L G ++ AG S + G+V+ +G + E
Sbjct: 601 ---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT- 650
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ RP LI +L ++ ++ CG H L+ E++ WG+N G G G
Sbjct: 651 SLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQG 698
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 41/239 (17%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + + P + SA + + + L H+L LTETG V++ G D+
Sbjct: 3915 GEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDY 3974
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I GL+ +EVVQ++ G+ HS+ +T DG+L+ +G +G+LG
Sbjct: 3975 GKLGHG-NSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRS 4033
Query: 160 KAAKVIP---------------------------IPTKVECLSGIFTKQAALGFEQSVAV 192
+ K+IP P + L G+F + A+G E +A+
Sbjct: 4034 TSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHILAL 4093
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G V +WG +LG G + + P L+ L+G ++ +AG HS+
Sbjct: 4094 SNTGDVYAWGCNCEAQLGLGHSNPV---------KEPILVTTLQGKNIRQISAGRCHSS 4143
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 129/292 (44%), Gaps = 52/292 (17%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWGNG +G+L + P + + + + + CG T + G V A G +G
Sbjct: 3864 LWGNGRHGQLADAGTSAS-VPTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVGEGSYG 3920
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGY---HHSSAITVDGELYMWGKNSNGQLGL 157
+LG N P IS L+ VV Q+ T Y HS A+T GE++ WG G+LG
Sbjct: 3921 RLG-QGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKLGH 3979
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P ++E L G Q A GF+ S VT GK+ ++G+G SGRLG
Sbjct: 3980 GNSERQR--RPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQ------ 4031
Query: 218 LGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV---DKMLFQ 273
RSTS + P + L+G + G R + D ML
Sbjct: 4032 ----RSTSNKMIPERVTALDG----------------------HHIGQRLIGLPDAML-- 4063
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
NH RP +I L + E++ G H L++ G++Y WG N LG+G
Sbjct: 4064 -KNH-NRPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLG 4113
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + ++ G H+ +T G +Y G DFG
Sbjct: 480 WGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFG 539
Query: 102 QLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLG 158
+LG S++ ++ L ISG V Q++ G H+ A+ DG + + +G NG+LG G
Sbjct: 540 RLGHSDSHSRNVPTLVKDISG----VGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHG 595
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P +E L G ++ G + S+A+T G+V +WG G LG G
Sbjct: 596 D--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS---- 647
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
T+ PRLI+EL K+ + G H + V+ +G+ A+
Sbjct: 648 ----ETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAM 692
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 18/242 (7%)
Query: 87 TETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+T VY G N QL G E I L+P G + I G + + +++ DG +
Sbjct: 367 NDTVMVYVWGSNSSHQLAEGTLEKI---LQPKLAQGFS-DAQMIEAGQYCTFSVSADGAV 422
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGA 203
GK S G+LGLG + +P +E + ++ G + ++AVT G+V SWG
Sbjct: 423 KACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGD 482
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G G+LGHG S ++ P++I+ L G V +AG+ HSA + +G +Y +
Sbjct: 483 GDYGKLGHGN---------SATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTW 533
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL-YTWGSNENGCLG 321
G+ ++ + + P+L+ + +V CG HT + G + +++G +NG LG
Sbjct: 534 GEGDFGRLGHSDSHSRNVPTLVKDISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLG 593
Query: 322 IG 323
G
Sbjct: 594 HG 595
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E+Y+WG +GQL +A V PT LS T+Q G + V G VL+ G
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASV---PTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVG 3915
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF---LHSACIDENGRV 259
G GRLG G + YTP +I L+G V + HS + E G V
Sbjct: 3916 EGSYGRLGQGNSDDL---------YTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEV 3966
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
+ +GD K+ RRP I L EEVV CG H+ V+T+ G+L+T+GS +
Sbjct: 3967 FSWGDGDYGKLGHGNSERQRRPKQIEGL-QGEEVVQLACGFKHSAVVTADGKLFTFGSGD 4025
Query: 317 NGCLG 321
+G LG
Sbjct: 4026 SGRLG 4030
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 85/190 (44%), Gaps = 11/190 (5%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
R +G GD G+LG G +RP V A ++ + G +L LT G V+A G
Sbjct: 579 RIVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGC 638
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G SE SL P I L +++ IS G H A++ + E++ WG N+ GQ G
Sbjct: 639 GSCLGCGSSETT--SLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCG 696
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSWGAGGSGRLGHGQ 213
G + V P KV L G+ +Q G S+ AV ++++W L
Sbjct: 697 QGHTSTPVTK-PKKVIGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCVDL---- 751
Query: 214 ESSILGFLRS 223
E S +LRS
Sbjct: 752 EESTFTYLRS 761
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 16/210 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG SR P + + +ACG +HT+ + + G V++ G D G
Sbjct: 533 WGEGDFGRLGHSDSHSRNVPTLVKDIS--GVGQVACGSSHTIAVAQDGRIVWSFGGGDNG 590
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P I L ++ ++ G S A+T G+++ WG S LG G
Sbjct: 591 KLGHGDT-NRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS 647
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E LS + G +A++ +V +WG G+ G G
Sbjct: 648 ETTSL-RPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHT------ 700
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
ST P+ + LEGV ++ AG HS
Sbjct: 701 --STPVTKPKKVIGLEGVSIQQITAGTSHS 728
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 22/254 (8%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L V + G N GQLG L P I L+ V +S G HS
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 88 LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSGG 307
G + +G + ++ N + +P I L Y + CG HT VL G
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLIQDG 255
Query: 308 ELYTWGSNENGCLG 321
+++T+G N +G LG
Sbjct: 256 KVFTFGDNSSGQLG 269
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 36/279 (12%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P + L + + G E + + GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG------- 313
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
H PS SK P E + G + L S +L
Sbjct: 314 ------HG--PSDTSK-PTHPEALTGNFDIRCLISAEDL 343
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1139
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 138/305 (45%), Gaps = 44/305 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 370 WGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 429
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G +
Sbjct: 430 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 488
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G R
Sbjct: 489 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 546
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 547 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 593
Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+ Q GN P K+P + EE+ CG YH VLTS E+YTWG NG
Sbjct: 594 PVYGQLGN----PHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 649
Query: 319 CLGIG 323
LG G
Sbjct: 650 RLGHG 654
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 137/289 (47%), Gaps = 37/289 (12%)
Query: 55 SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENI 109
SLE + ++ A E ++ +ACGG H + +T+ G ++ G G+L G+ N+
Sbjct: 327 SLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNV 386
Query: 110 GYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
+ P I L ++ ++ G +HS A+T+ G+LY WGK G LG G + + +P
Sbjct: 387 QH---PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKR 443
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+ GI A G + VT G++ ++G G G LGHG S+ +
Sbjct: 444 VNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV---------FI 493
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGN 276
PR + L+G++ AA G H+A + E +G+++ +GD DK G+
Sbjct: 494 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKSRLGHGD 551
Query: 277 HARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ P+ ++ L P +V CG T LT+ G +YT GS G LG
Sbjct: 552 KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG 600
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 539 WGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 598
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG G P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 599 LGNPHADGKV--PTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD- 655
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
A PT VE L K A G + AV
Sbjct: 656 -ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ N ++G + +P +E + + A G + +V VT
Sbjct: 303 GDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 362
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+ SWG GRLGHG +S++ P+LI L +++ A G HS +
Sbjct: 363 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALNTTNIELVACGEYHSCAV 413
Query: 254 DENGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
+G +Y +G D + GN +R + + + + + CG YHT V+TS G+
Sbjct: 414 TLSGDLYTWG--KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 471
Query: 309 LYTWGSNENGCLGIG 323
L+T+G G LG G
Sbjct: 472 LFTFGDGTFGVLGHG 486
>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 608
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT G++ ++G +G+LG + I + +P+ + + ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285
Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
+A G H+ + E VY FG + LF+ P +I ++ + +
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG HT ++T G +YT+G +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F K +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVF 402
>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1105
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 138/305 (45%), Gaps = 44/305 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 336 WGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 395
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G +
Sbjct: 396 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 454
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G R
Sbjct: 455 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 512
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 513 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 559
Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+ Q GN P K+P + EE+ CG YH VLTS E+YTWG NG
Sbjct: 560 PVYGQLGN----PHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 615
Query: 319 CLGIG 323
LG G
Sbjct: 616 RLGHG 620
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 137/289 (47%), Gaps = 37/289 (12%)
Query: 55 SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENI 109
SLE + ++ A E ++ +ACGG H + +T+ G ++ G G+L G+ N+
Sbjct: 293 SLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNV 352
Query: 110 GYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
+ P I L ++ ++ G +HS A+T+ G+LY WGK G LG G + + +P
Sbjct: 353 QH---PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKR 409
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+ GI A G + VT G++ ++G G G LGHG S+ +
Sbjct: 410 VNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV---------FI 459
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGN 276
PR + L+G++ AA G H+A + E +G+++ +GD DK G+
Sbjct: 460 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD--GDKSRLGHGD 517
Query: 277 HARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ P+ ++ L P +V CG T LT+ G +YT GS G LG
Sbjct: 518 KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG 566
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 505 WGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 564
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG G P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 565 LGNPHADGKV--PTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD- 621
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
A PT VE L K A G + AV
Sbjct: 622 -ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 652
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ N ++G + +P +E + + A G + +V VT
Sbjct: 269 GDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 328
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+ SWG GRLGHG +S++ P+LI L +++ A G HS +
Sbjct: 329 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALNTTNIELVACGEYHSCAV 379
Query: 254 DENGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
+G +Y +G D + GN +R + + + + + CG YHT V+TS G+
Sbjct: 380 TLSGDLYTWG--KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 437
Query: 309 LYTWGSNENGCLGIG 323
L+T+G G LG G
Sbjct: 438 LFTFGDGTFGVLGHG 452
>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
Length = 879
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 139/297 (46%), Gaps = 29/297 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ + ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 102 WGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNA 161
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG V +S G H++ IT G+LY +G + G LG G
Sbjct: 162 GLLGHGSNVSHWI-PKRVSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHG 220
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
+A+ P +VE L G+ T + G + AV GK+ +WG G RL
Sbjct: 221 NRAS--CSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRL 278
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P I L AA G + + +G ++ G +V
Sbjct: 279 GHGDRSSKL---------KPTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGS-SVYG 328
Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L N R P L+ + EV CG YH VLT+ GE+YTWG NG LG G
Sbjct: 329 QLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRLGHG 385
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G S+ +P + ++ ACG T+ LT +G ++ G + +GQ
Sbjct: 270 WGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSVYGQ 329
Query: 103 LGISENIGYSLEPLRISGLKKE------VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LG N G R L +E VV+++ G +H + +T GE+Y WGK +NG+LG
Sbjct: 330 LGNPNNDG------RYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRLG 383
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G A + +PT VE L K+ A G + A+
Sbjct: 384 HGDIADR--KVPTLVEALRDRSVKRVACGSSFTAAI 417
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 24/196 (12%)
Query: 142 GELYMWGK---NSNGQLGLGKKA-----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ + G + A + +P +E + A G + + VT
Sbjct: 35 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 94
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +++ + PRL++ L V++ A G H+ +
Sbjct: 95 RQSEVFTWGEECSGRLGHGTGTNV---------FQPRLVESLSICNVELIACGEFHTCAV 145
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS----KLPYSEEVVCGGYHTCVLTSGG 307
G +Y +GD + L G++ P +S LP S V CG +HT ++TS G
Sbjct: 146 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVS-TVSCGTWHTALITSSG 204
Query: 308 ELYTWGSNENGCLGIG 323
+LYT+G G LG G
Sbjct: 205 QLYTFGDGTFGVLGHG 220
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 30/226 (13%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + +V ++ G H++ +T E++ WG+ +G+LG G + P VE
Sbjct: 70 KPLE-SNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHG--TGTNVFQPRLVES 126
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
LS + A G + AVT G + +WG G +G LGHG + S + P+
Sbjct: 127 LSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS---------NVSHWIPKR 177
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--RRPSLISKLP 288
+ L+G+ V + G H+A I +G++Y FGD + GN A P + L
Sbjct: 178 VSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFG--VLGHGNRASCSYPKEVESLK 235
Query: 289 --YSEEVVCGGYHTCVLT---------SGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 236 GLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHG 281
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGG---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-- 282
++ TP + L+G++V+ AA G+ H+ + + G+VY++G + ++ GN + +P
Sbjct: 244 NQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQL--GTGNKSNQPYPT 301
Query: 283 --LISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
++ K E C HT T GG +Y WG
Sbjct: 302 PIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K+V +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + + G VY++G ++ + P ++ L
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCRVAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ CG HT VLT G++Y WG+N G LG G
Sbjct: 259 VQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTG 292
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG ++ P +A + ++ ACG AHTL LT+ G VY G N +G
Sbjct: 228 VWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG N P I K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTG-NKSNQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357
>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
Length = 1100
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 138/305 (45%), Gaps = 44/305 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G + P + A +++ +ACG H+ +T +G +Y G DFG
Sbjct: 331 WGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 390
Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P R++ L + V I+ G +H++ +T G+L+ +G + G LG G +
Sbjct: 391 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 449
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
K + IP +V+ L G+ T +AA G + AV GK+ +WG G R
Sbjct: 450 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 507
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + L P + L A G + + +G VY G
Sbjct: 508 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 554
Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+ Q GN P K+P + EE+ CG YH VLTS E+YTWG NG
Sbjct: 555 PVYGQLGN----PHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 610
Query: 319 CLGIG 323
LG G
Sbjct: 611 RLGHG 615
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 140/294 (47%), Gaps = 38/294 (12%)
Query: 50 RLGLGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQL--G 104
R+G SLE + ++ A E ++ +ACGG H + +T+ G ++ G G+L G
Sbjct: 284 RVG-SSLEIKMDSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHG 342
Query: 105 ISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ N+ + P I L ++ ++ G +HS A+T+ G+LY WGK G LG G + +
Sbjct: 343 VDSNVQH---PKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSH 399
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P + GI A G + VT G++ ++G G G LGHG S+
Sbjct: 400 WVPKRVNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV------ 452
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKML 271
+ PR + L+G++ AA G H+A + E +G+++ +GD DK
Sbjct: 453 ---FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKSR 507
Query: 272 FQEGNHARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
G+ + P+ ++ L P +V CG T LT+ G +YT GS G LG
Sbjct: 508 LGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG 561
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E + P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 500 WGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 559
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG G P R+ G K V +I+ G +H + +T E+Y WGK SNG+LG G
Sbjct: 560 LGNPHADGKV--PTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGD- 616
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
A PT VE L K A G + AV
Sbjct: 617 -ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + +V VT G+ SWG GRLGHG +S++
Sbjct: 297 LPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNV--------- 347
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-----ARRP 281
P+LI L +++ A G HS + +G +Y +G D + GN +R
Sbjct: 348 QHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWG--KGDFGILGHGNEVSHWVPKRV 405
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + + CG YHT V+TS G+L+T+G G LG G
Sbjct: 406 NFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHG 447
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 137/288 (47%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG+ E+ PV H +K + GG H+L +T G V++ G G
Sbjct: 2927 GEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDG 2986
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + + L P I L+ K +V+I+ G HS+A+T DGELY WG G+LG G
Sbjct: 2987 KLGHGD-VTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGD- 3044
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+K + IP +V+ L A G Q++A+T V SWG G G+LG G
Sbjct: 3045 -SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGG----- 3098
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P+ I L G V A G S + G+V+ +G ++ +H
Sbjct: 3099 ----SEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHY 3154
Query: 279 RRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R P LI K E+ G H +T GE+Y+WG N++G G G
Sbjct: 3155 RSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNG 3202
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 124/269 (46%), Gaps = 19/269 (7%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
PV+ + ++ L+ GG H + LT V++ G + G+LG + + S P +I
Sbjct: 3846 PVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLS-SETPRKIE 3904
Query: 120 GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L K++V IS G HS+AIT GELY WGK G+LG G + P +E L
Sbjct: 3905 ALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCL--KPKLLEALKSYK 3962
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G Q++A+T V SWG G G+LG G LR I+ L
Sbjct: 3963 VIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLR---------IESLI 4013
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
G+ V G S + +NG +Y +G ++ +H RRP ++ L + V
Sbjct: 4014 GMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVA 4073
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H T GE++TWG N+ G LG G
Sbjct: 4074 AGSLHCVACTDAGEVFTWGDNDEGQLGNG 4102
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G + SR P + A E + +ACG +H+ +T G +Y GL D+G+
Sbjct: 2980 WGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGR 3039
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG ++ + P ++ L+ +V+ I+ G + A+T + ++ WG G+LG G
Sbjct: 3040 LGHGDSKTLHI-PKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRG- 3097
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP K++ L G + A G + S+A++ GKV +WG G RLGHG +S
Sbjct: 3098 -GSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHY-- 3154
Query: 220 FLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+P+LI+ L+ ++ A G LH + + G VY +GD
Sbjct: 3155 -------RSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGD 3193
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 114/216 (52%), Gaps = 23/216 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG GDYGRLG G ++ P A + + + +ACG A TL LT+ CV++ G DF
Sbjct: 3032 WGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDF 3091
Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G ++ P +I L ++V +I+ G S A++ G+++ WGK +LG G
Sbjct: 3092 GKLGRGGSEGCNI-PQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGN 3150
Query: 160 ----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
++ ++I P K + ++ I A+G +AVT G+V SWG G+ G+G
Sbjct: 3151 DSHYRSPQLIEGPLKKKRITEI-----AVGALHCLAVTDTGEVYSWGDNDHGQQGNGN-- 3203
Query: 216 SILGFLRSTSEYTPRL-IKELEGVKVKIAAAGFLHS 250
+T P++ + EL+GVK+ A G HS
Sbjct: 3204 -------TTVNKRPQICLGELDGVKISHIACGSSHS 3232
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 123/263 (46%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG G S P A + ++CG +H+ +T G +Y G +G+
Sbjct: 3881 WGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGR 3940
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG + L+P + LK +V+ ++ +G + AIT D ++ WG G+LG G
Sbjct: 3941 LGHGDG-DDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRG- 3998
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++E L G+ + G + SVA+T G + +WG G RLGHG +
Sbjct: 3999 -GSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHV-- 4055
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G ++ AAG LH + G V+ +GD ++ N
Sbjct: 4056 -------RRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIP 4108
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
P+L++ L + V CG H+
Sbjct: 4109 EPTLVTVLENVKLNRVGCGSAHS 4131
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 23/263 (8%)
Query: 62 PVVCSAFEKHSLKALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
PV+ + +K +A G H L L+ GCVY+ G D G+LG + EP +
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGD---IRREPELVK 558
Query: 120 GL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L K++ QI+ G +S+A+T +GELY WG+ S G+LG G ++ +PT V LSG
Sbjct: 559 ELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRL--LPTLVAGLSGSH 616
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G ++A+ G V SWG G G+LG G S P++++ L+
Sbjct: 617 VVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGG---------SDCCKVPKVVETLK 667
Query: 237 GVKVKIAAA--GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEE 292
I G S + ++G V+ +G ++ +H R P ++ L + +
Sbjct: 668 HHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD 727
Query: 293 VVCGGYHTCVLTSGGELYTWGSN 315
+ G H LT +++TWGS+
Sbjct: 728 IAVGPSHCLALTDNCQIFTWGSD 750
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 136/291 (46%), Gaps = 23/291 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYA--TGLN 98
+WG+ G+LG PV+ A+A GG TLF LT G VYA G +
Sbjct: 3774 VWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVA-GGEQTLFILTSEGKVYASGLGGS 3832
Query: 99 DFGQLGISENI--GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+G S+NI +EPL+ LK E + + +G H+ +T + E++ WG +G+LG
Sbjct: 3833 GRLGIGRSDNIVTPVIIEPLQ--HLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLG 3890
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G K + P K+E L G + G S A+T G++ +WG G GRLGHG
Sbjct: 3891 HGDKLSS--ETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDD 3948
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
L P+L++ L+ KV A +G + I ++ V+ +GD K+
Sbjct: 3949 CL---------KPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGG 3999
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++P I L +V CG + LT G+LYTWG + LG G
Sbjct: 4000 SDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHG 4050
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 115/240 (47%), Gaps = 21/240 (8%)
Query: 92 VYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
V+ GLND GQLG + E I+ L+ V I+ G +T DG++Y+ G+
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRP--VSIAGGSKTVFIVTYDGKVYVSGE 2928
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
+NG+LGLG + I IP +++ L+ F K+ + G S+ +T GKV SWG G G
Sbjct: 2929 GANGRLGLGN--TENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDG 2986
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LGHG TS +P LI+ LE + A G HSA + +G +Y +G
Sbjct: 2987 KLGHGD---------VTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDY 3037
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
++ + P + L + ++ CG T LT +++WG + G LG G
Sbjct: 3038 GRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRG 3097
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 22/274 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G + R P + + +ACG ++ +T G +Y G +G+
Sbjct: 537 WGSGDGGRLGHGDI--RREPELVKELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGR 594
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N L P ++GL VV ++ +G H+ AI DG ++ WG G+LG G
Sbjct: 595 LG-HGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRG- 652
Query: 160 KAAKVIPIPTKVECLS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ +P VE L + G + SVA+ G V +WG RLGHG
Sbjct: 653 -GSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHG----T 707
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L +R P++++ L + A G H + +N +++ +G V K N+
Sbjct: 708 LDHVR-----YPKMVEGLINYHIVDIAVGPSHCLALTDNCQIFTWGS-DVQKYALSSDNY 761
Query: 278 ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGEL 309
P+ IS + + V CG + TSGG+L
Sbjct: 762 NMEPTCISAINKEFIAGVACGPAQNFLWTSGGKL 795
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 113/257 (43%), Gaps = 27/257 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+K + C + + LT G VY+ N + + + SL ++I + V G
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNARCEAPV---LLDSLIDIKIKKIAANV----EGE 523
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A++ DG +Y WG G+LG G + P V+ L Q A G S AV
Sbjct: 524 HYL-ALSSDGCVYSWGSGDGGRLGHGDIRRE----PELVKELVNKKITQIACGSTYSAAV 578
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHS 250
T G++ +WG G GRLGHG S P L+ L G V A +G H+
Sbjct: 579 TSNGELYTWGRGSYGRLGHGN---------SEDRLLPTLVAGLSGSHVVDVACGSGDAHT 629
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP----YSEEVVCGGYHTCVLTSG 306
ID++G V+ +GD K+ + + P ++ L Y V+CG + L
Sbjct: 630 LAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKD 689
Query: 307 GELYTWGSNENGCLGIG 323
G ++TWG ++ LG G
Sbjct: 690 GTVWTWGKSDGYRLGHG 706
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 89/188 (47%), Gaps = 15/188 (7%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+D +++WG N GQLG G K +KV PT+++ ++ + A G + VT GKV
Sbjct: 2867 IDSRVFVWGLNDKGQLG-GCKGSKV-KSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVY 2924
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG--VKVKIAAAGFLHSACIDENG 257
G G +GRLG G +I P + L VK G HS CI G
Sbjct: 2925 VSGEGANGRLGLGNTENI---------SIPVQLDTLNMHFVKKVTVHPGGRHSLCITREG 2975
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
+V+ +G+ K+ + P+LI L E+ CG H+ +T+ GELYTWG
Sbjct: 2976 KVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLG 3035
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 3036 DYGRLGHG 3043
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + +P+ + ++ + CG ++ LT+ G +Y G D+ +
Sbjct: 3987 WGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYR 4046
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N + P +++ L+ K++V ++ G H A T GE++ WG N GQLG G
Sbjct: 4047 LGHGTN-DHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNG--T 4103
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
IP PT V L + + G S A
Sbjct: 4104 LNPIPEPTLVTVLENVKLNRVGCGSAHSFA 4133
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P A + +ACG +L L+ TG V+ G D+ +
Sbjct: 3086 WGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYR 3145
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + Y P I G KK + +I+ G H A+T GE+Y WG N +GQ G G
Sbjct: 3146 LGHGNDSHYR-SPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNT 3204
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
P E L G+ A G S+A G
Sbjct: 3205 TVNKRPQICLGE-LDGVKISHIACGSSHSIAWCGN 3238
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 91/238 (38%), Gaps = 67/238 (28%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKV-------------------------------------- 164
+ Y+WG N GQLG G + KV
Sbjct: 3771 KFYVWGHNHRGQLG-GVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGL 3829
Query: 165 -------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
I P +E L + ++ ++ G ++ +T +V SWG G G+L
Sbjct: 3830 GGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKL 3889
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG + S TPR I+ L G ++ + G HSA I G +Y +G +
Sbjct: 3890 GHGDK---------LSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGR 3940
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ +G+ +P L+ L + +V CG T +T +++WG + G LG G
Sbjct: 3941 LGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRG 3998
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 136/277 (49%), Gaps = 29/277 (10%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLG 104
G LGLG ++S P + S K +AC G H + T G ++ G N + QLG
Sbjct: 146 GCLGLGDIQSTIEP---RRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLG 202
Query: 105 ISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+ + L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A
Sbjct: 203 -NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN 261
Query: 163 KVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ PIP +V CL A G SVAV G+V WG G+G+LG G
Sbjct: 262 Q--PIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGS-------- 311
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
S ++ TP I L+G+ V+ A G+ H+ + + G+VY++G + ++ GN + +
Sbjct: 312 -SGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQL--GTGNKSNQS 368
Query: 281 ---PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 369 YPTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 405
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+ T ++ G N G LG+ + I ++EP R+ L K++ S G H
Sbjct: 124 AGNEVLYSTVNDEIFVLGTNCCGCLGLGD-IQSTIEPRRLDSLSGKKIACFSYGSGPHVI 182
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE++ WG N+ QLG G ++P LS + A G S+ +T G
Sbjct: 183 LATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDG 241
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + KV + A G + S + +
Sbjct: 242 EVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVD 292
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
NG VY++G ++ + P I+ L + V CG HT VLT G++Y WG
Sbjct: 293 NGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWG 352
Query: 314 SNENGCLGIG 323
+N G LG G
Sbjct: 353 ANSYGQLGTG 362
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VY G N +G
Sbjct: 298 VWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYG 357
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 358 QLGTGNKSNQSY-PTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 410
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 411 --SVILPHLTSFSCTDDVF 427
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 130/286 (45%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 4011 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4070
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4071 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4130
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +E L A G Q++ VT V SWG G G+LG G
Sbjct: 4131 DQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4182
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4183 ---SDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4239
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP ++ L + + G H T GE++TWG N+ G LG G
Sbjct: 4240 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4285
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 137/287 (47%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K ++ GG H L LT+ G V++ G + G
Sbjct: 2992 GEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDG 3051
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +I +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3052 KLGHGNSISLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3110
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A + P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3111 ATQ--SKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG----- 3163
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3164 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3219
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+L+ L + V G H +T G++Y WG N++G G G
Sbjct: 3220 RKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNG 3266
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + + ++ +ACG H+ +T +G +Y GL ++G+
Sbjct: 3045 WGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3104
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + S L S + + ++QI+ G + A+T DG +Y WG G+LG G
Sbjct: 3105 LGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGS 3164
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ ++ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3165 DGCYTPL--LIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3219
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G KV A G LH + + G+VY +GD Q+GN
Sbjct: 3220 ------RKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHG----QQGNGTTI 3269
Query: 279 --RRPSLISKLPYS--EEVVCGGYHT 300
++PSL+ +L + V CG H+
Sbjct: 3270 VNKKPSLVHELDDARVNRVSCGSSHS 3295
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4064 WGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 4123
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P I L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4124 LGHGDSED-QLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4181
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K+E L+G+ + G + SVA+T G + +WG G RLGHG + +
Sbjct: 4182 -GSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHV-- 4238
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4239 -------RRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQ 4291
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4292 RPRLVHALQGKKITRVACGSAHT 4314
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 142/316 (44%), Gaps = 28/316 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+ +Y +LG K C +R L NG+ + GS E+++ P F
Sbjct: 451 SPFYYDTIAELGIKQLCCT-------ERALMILSVNGNVYMMYYGS-ETQY-PQRVYGFS 501
Query: 70 KHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVV 126
+ + +A G H L LT+ VY+ G D G+LG + Y EP I L +K +
Sbjct: 502 EKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYD-EPKLIEALVEKNIT 560
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
I+ G +S+A++ +GELY WG+ + G+LG G + + IPT V L+G A G
Sbjct: 561 FIACGSTYSAALSSNGELYTWGRGNYGRLGHGN--SDNVMIPTLVTALNGHMVVYVACGS 618
Query: 187 --EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
Q++ VT G V SWG G G+LG G TP+++ +L + V
Sbjct: 619 GDSQTLCVTASGIVFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVY 669
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS--KLPYSEEVVCGGYHTCV 302
G SA + G VY +G ++ +H R P +I K +E+ G H
Sbjct: 670 CGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLA 729
Query: 303 LTSGGELYTWGSNENG 318
LT +Y WG N+ G
Sbjct: 730 LTEDQLIYGWGRNDYG 745
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 136/290 (46%), Gaps = 23/290 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV+C + L GG TLF +T G VYATG G
Sbjct: 3958 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 4016
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 4017 RLGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4074
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4075 GNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4128
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + TP+LI+ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4129 -----SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4183
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4184 DGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4233
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 143/297 (48%), Gaps = 23/297 (7%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGCVY 93
Q +WG D +LG G S+ + PV K +A GG+ TLF+ ++ G +Y
Sbjct: 2932 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSKLKPVHIA-GGSKTLFVVSQEGKLY 2989
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKN 150
A G G+LG+ ++ EP I L + V++ + +G H+ A+T DG+++ WG+
Sbjct: 2990 ACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEG 3048
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+LG G + + P +E L + A G S A+T G++ +WG G GRLG
Sbjct: 3049 EDGKLGHGNSIS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 3106
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVD 268
HG + ++ P+L++ L G ++ A G + + +G VY +GD
Sbjct: 3107 HGD---------TATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFG 3157
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
K+ + P LI +L ++ CG + LT GE++TWG + LG G
Sbjct: 3158 KLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3214
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 118/243 (48%), Gaps = 21/243 (8%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYM 146
+G +Y G N GQLG E L L +S L+ VQ++ G A+T DG++Y
Sbjct: 3952 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLFAVTADGKVYA 4009
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G + G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 4010 TGYGAVGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEG 4067
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 4068 DDGKLGHGNR---LSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGK 4118
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
++ + P LI L + +V CG T +T +++WG + G L
Sbjct: 4119 GRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4178
Query: 321 GIG 323
G G
Sbjct: 4179 GRG 4181
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 113/258 (43%), Gaps = 29/258 (11%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTG 131
+K L C + L+ G VY Q P R+ G +K ++ I++
Sbjct: 463 IKQLCCTERALMILSVNGNVYMMYYGSETQY-----------PQRVYGFSEKPIIMIASH 511
Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
H A+T D +Y WG G+LG G +A P +E L A G S
Sbjct: 512 SDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAW--YDEPKLIEALVEKNITFIACGSTYS 569
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
A++ G++ +WG G GRLGHG +++ P L+ L G V A +G
Sbjct: 570 AALSSNGELYTWGRGNYGRLGHGNSDNVM---------IPTLVTALNGHMVVYVACGSGD 620
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTS 305
+ C+ +G V+ +GD K+ + ++ P ++ KL +V CGG + LT+
Sbjct: 621 SQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTA 680
Query: 306 GGELYTWGSNENGCLGIG 323
GE+YTWG E LG G
Sbjct: 681 YGEVYTWGKGEAYRLGHG 698
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+YG+LG G + P + ++ + CGG + LT G VY G + +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYR 694
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N + P I LK K+V ++ G H A+T D +Y WG+N GQ +
Sbjct: 695 LG-HGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQ--IDPAL 751
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V+P PT LSG A G QS A
Sbjct: 752 GTVVPEPTLCPTLSGKNVIGLACGPTQSFA 781
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + T+ G V+ G ND GQ
Sbjct: 4222 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4281
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4282 LGDGTTSALQ-RPRLVHALQGKKITRVACGSAHTLA 4316
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 19/272 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG G ++S P + + L+ G G H + TE G VY G N + QLG +
Sbjct: 93 GCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG-NG 151
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P ++S + K+V++++ G HHS +T DGE+Y WG N++GQ+G G A +
Sbjct: 152 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-- 209
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 210 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SG 260
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+G++V+ A G H+ + + G++Y +G + ++ ++ P+ +
Sbjct: 261 NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV 320
Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G++Y WG
Sbjct: 321 TVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 352
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 117/250 (46%), Gaps = 16/250 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L++TE V+ G+N G LG + + ++EP R+ L K++ +S G H
Sbjct: 71 AGNEVLYVTENDEVFVLGMNCSGCLGTGD-VQSTIEPKRLDSLCGKKIACLSYGSGPHVV 129
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE+Y WG N+ QLG G ++P L + A G S+ +T G
Sbjct: 130 LATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTN-LVNKKVIEVACGSHHSMVLTSDG 188
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + KV + A G + S + E
Sbjct: 189 EVYTWGYNNSGQVGSGS---------TANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVE 239
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
NG VY++G ++ + P I+ L + V CG HT VLT G++Y WG
Sbjct: 240 NGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG 299
Query: 314 SNENGCLGIG 323
+N G LG G
Sbjct: 300 ANSYGQLGTG 309
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 245 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYG 304
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K V++I+ + H S+A T G++YMWG+ GQ
Sbjct: 305 QLGTGNKSNQSY-PTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 357
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 358 --SVVLPHLTHFACTDDVF 374
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 22/254 (8%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L V + G N GQLG L P I L+ V +S G HS
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 88 LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSGG 307
G + +G + ++ N + +P I L Y + CG HT VL G
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLIQDG 255
Query: 308 ELYTWGSNENGCLG 321
+++T+G N +G LG
Sbjct: 256 KVFTFGDNSSGQLG 269
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 36/279 (12%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P + L + + G E + + GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG------- 313
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
H PS SK P E + G + L S +L
Sbjct: 314 ------HG--PSDTSK-PTHPEALTGNFDIRCLISAEDL 343
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 22/254 (8%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L V + G N GQLG L P I L+ V +S G HS
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 88 LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSGG 307
G + +G + ++ N + +P I L Y + CG HT VL G
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLIQDG 255
Query: 308 ELYTWGSNENGCLG 321
+++T+G N +G LG
Sbjct: 256 KVFTFGDNSSGQLG 269
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 22/254 (8%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L V + G N GQLG L P I L+ V +S G HS
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 88 LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSGG 307
G + +G + ++ N + +P I L Y + CG HT VL G
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLIQDG 255
Query: 308 ELYTWGSNENGCLG 321
+++T+G N +G LG
Sbjct: 256 KVFTFGDNSSGQLG 269
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQ LG++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
Length = 1099
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 139/300 (46%), Gaps = 32/300 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG HT +T +G +Y G ++
Sbjct: 329 WGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNY 388
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 389 GLLGHGNQVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 447
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P ++E L G+ T QAA G + AV GK+ +WG G
Sbjct: 448 DR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 505
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S L P + L+ A G + + G VY G
Sbjct: 506 GRLGHGDKESKL---------VPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGS-C 555
Query: 267 VDKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V L + P+ + KL S EE+ CG YH VLTS E++TWG NGCLG G
Sbjct: 556 VYGHLGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHG 615
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ES+ P ++ + +ACG + T+ L+ G VY G +G
Sbjct: 500 WGDGDKGRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGH 559
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ G P+ K V +I+ G +H + +T E++ WGK +NG LG G
Sbjct: 560 LGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTND 619
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K A G + A+
Sbjct: 620 RN--TPTLVEALKDKQVKSIACGTNFTAAI 647
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G E + VT G+V SWG GRLGHG +S +
Sbjct: 295 LPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVP-------- 346
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI+ L +++ A G H+ + +G +Y +GD + L GN P +
Sbjct: 347 -HPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRV 405
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT V+TS G+L+T+G G LG G
Sbjct: 406 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 447
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 135/265 (50%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G+N GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL + +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-MTIEDSVAVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL ++E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q+ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISPNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LF 272
++ S + PRLI++L + + G H + +G+ + +G + ++ F
Sbjct: 118 LMTIEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEF 175
Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+R + +P ++ VV GG H+ L+ G ++ WG N G LG+
Sbjct: 176 PSQASPQRVRSLEGIPLAQ-VVAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L + GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLG 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
Length = 590
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
Length = 1104
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 137/307 (44%), Gaps = 46/307 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 334 WGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV------------TGGGKVLSWGAGGS 206
+ K I +P +VE L G+ T QAA G + AV GK+ +WG G
Sbjct: 453 DR--KSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + +G VY G
Sbjct: 511 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGS-- 559
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 560 --PVYGQLGN----PLADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGA 613
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 614 NGRLGHG 620
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E++ P +A + + +ACG + T+ T +G VY G +GQ
Sbjct: 505 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQ 564
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + P R+ G K V +I+ G +H + +T E+Y WGK +NG+LG G
Sbjct: 565 LG--NPLADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDT 622
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ P+ VE L K A G + A+
Sbjct: 623 DDRN--SPSLVEALKDKQVKSIACGTSFTAAI 652
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P +E + + A G + + VT G++ SWG GRLGHG +S ++
Sbjct: 300 FPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVM-------- 351
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L +++ A G H+ + +G +Y +GD + L GN P +
Sbjct: 352 -HPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 410
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT V+TS G+L+T+G G LG G
Sbjct: 411 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 452
>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
Length = 233
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 122/237 (51%), Gaps = 15/237 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 100 FGQLG---ISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+GQLG I E I LEP R + K+V + G H+ + DG +Y G N GQL
Sbjct: 9 YGQLGLGGIDEEI--VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQL 66
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQE 214
G K K P +V L A G ++A+ G+V +WG G+LG G E
Sbjct: 67 GHEKSRKK----PEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE 122
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQ 273
I PR IK L +++ A G+ HS + + V+ +G ++ L
Sbjct: 123 ECI---------RVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI 173
Query: 274 EGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ P LI L P+ + V GG H+ VLT G ++ WG N+ G LG+
Sbjct: 174 DCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 14/183 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ WG S GQLGLG +++ P + + + G +V V G V + G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH S P + L+ + A G H+ +++ G+VY +G
Sbjct: 61 NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109
Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+ ++ Q R P I L + +V CG YH+ L+ E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169
Query: 321 GIG 323
G+G
Sbjct: 170 GLG 172
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIG 110
QLG+++ G
Sbjct: 221 QLGLNDENG 229
>gi|336116892|ref|YP_004571659.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
gi|334684671|dbj|BAK34256.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
Length = 508
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 143/295 (48%), Gaps = 35/295 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+ +LG G+ E+R PV + +KA+A GG +L L + G V++ G ND+ Q
Sbjct: 202 WGRNDWAQLGDGTKETRHAPVDVMHLARFGVKAIAAGGWTSLALLKDGTVWSWGANDWRQ 261
Query: 103 LGISENIGYSLE--PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-- 158
LG + G++ P+++ GL V + G HS A+ DG ++ WG GQLG G
Sbjct: 262 LGAGD-TGFNAHTIPVKVEGLSG-VTAVDIGGWHSLALREDGTVWSWGHGHQGQLGDGTN 319
Query: 159 --KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
AA V+P LSG+ K + G+ S+A+ G V SWG G+LG G
Sbjct: 320 SDHNAAAVVP------GLSGV--KAVSAGYRHSLALLRDGTVWSWGYNAQGQLGDGT--- 368
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLH----SACIDENGRVYIFGDRAVDKM 270
+T+ TP + L G IAA + H S + E+G V+ +G D
Sbjct: 369 ------NTNRNTPVKVASLGGRVKAIAASSSNVFHDPSFSLALLEDGTVWSWGTN--DWH 420
Query: 271 LFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+G + R P +S L + + GG H+ L G ++ WG+N++G +G G
Sbjct: 421 QLGDGTNTSRNTPVKVSDLSGVKAIAPGGRHSLALLKDGTVWGWGANDHGQVGTG 475
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAH-------TLFLTETGCVYAT 95
WG G+LG G+ +R PV ++ +KA+A ++ +L L E G V++
Sbjct: 356 WGYNAQGQLGDGTNTNRNTPVKVASLGGR-VKAIAASSSNVFHDPSFSLALLEDGTVWSW 414
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G ND+ QLG N + P+++S L V I+ G HS A+ DG ++ WG N +GQ+
Sbjct: 415 GTNDWHQLGDGTNTSRNT-PVKVSDLSG-VKAIAPGGRHSLALLKDGTVWGWGANDHGQV 472
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G G P K+E +S + K A G S+A
Sbjct: 473 GTGDGTPDRYAAPVKIEGISHV--KAIAAGGWHSIAA 507
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+ +LG G+ SR PV S +KA+A GG H+L L + G V+ G ND GQ
Sbjct: 414 WGTNDWHQLGDGTNTSRNTPVKVSDLS--GVKAIAPGGRHSLALLKDGTVWGWGANDHGQ 471
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAI 138
+G + P++I G+ + G+H +A+
Sbjct: 472 VGTGDGTPDRYAAPVKIEGISHVKAIAAGGWHSIAAL 508
>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
musculus]
gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
Length = 557
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHML 400
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 136/281 (48%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG G R P + + + + G H++ +TE G V+ G N +GQ
Sbjct: 169 WGNNPSGQLGNGQRTQRNAPTRVRGLNQ--VVSASAGAEHSVAVTEDGSVWTWGSNAYGQ 226
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N ++ P+++ G+ +VV ++ + A+ DG ++ WG NS+G+LG G
Sbjct: 227 LGDGTNTLRAV-PVQVPGM-SDVVAVAAAGSRTVALKADGTVWTWGINSSGELGDGTTTH 284
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++PI +V LSG+ A G ++AV G SWG G+LG G + L LR
Sbjct: 285 SLLPI--QVPNLSGV--TNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDG---TTLNRLR 337
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P L+ L GV+ + G +H+ + +G + +G + ++ ++ P
Sbjct: 338 ------PVLVAGLTGVRAL--SGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPV 389
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + E+ GGYHT G LY WG N G LG G
Sbjct: 390 QVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTG 430
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 137/281 (48%), Gaps = 24/281 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ G LG G+ R P VV S K A G AH++ L G V+ G N +
Sbjct: 474 WGHNTNGELGDGTTTQRTSPTAVVVSGIVK-----TAGGSAHSVALGAGGAVWTWGYNAY 528
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG + + P ++ G+ V+ ++ G +H+ A++ DG + WG N+ GQLG G
Sbjct: 529 GQLG-NGTTTQVVTPTQLPGMSG-VIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTT 586
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A ++ P V L G+ A G +VA+ G V +WG+ G+LG G
Sbjct: 587 ANQL--TPQSVPELDGVTAISA--GSTHTVALKADGTVWAWGSNLYGQLGDG-------- 634
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T +P + LE V V I AAG H+ + +G ++++G ++ +
Sbjct: 635 -TFTHRSSPVQVPSLENV-VSI-AAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSV 691
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P +S L ++ + GGYHT L + G+++TWG N +G LG
Sbjct: 692 PVQVSGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLG 732
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 114/242 (47%), Gaps = 17/242 (7%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
HTL + G ++A G N GQLG + + P R+ GL +VV S G HS A+T D
Sbjct: 156 HTLEVKSGGSLWAWGNNPSGQLGNGQRTQRN-APTRVRGLN-QVVSASAGAEHSVAVTED 213
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G ++ WG N+ GQLG G + +P+ +V +S + AA ++VA+ G V +W
Sbjct: 214 GSVWTWGSNAYGQLGDGTNTLRAVPV--QVPGMSDVVAVAAA--GSRTVALKADGTVWTW 269
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G SG LG G +T P + L G V AAG H+ + ++G +
Sbjct: 270 GINSSGELGDG---------TTTHSLLPIQVPNLSG--VTNIAAGLWHTLAVKKDGSAWS 318
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+G+ A ++ + RP L++ L + G HT L G + WG N G LG
Sbjct: 319 WGNNAYGQLGDGTTLNRLRPVLVAGLTGVRALSGGVVHTVALKWDGTAWGWGYNSAGQLG 378
Query: 322 IG 323
G
Sbjct: 379 NG 380
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 118/224 (52%), Gaps = 21/224 (9%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
A WG YG+LG G+ ++ P S E + A++ G HT+ L G V+A G N +
Sbjct: 571 AAWGYNAYGQLGNGTTANQLTP--QSVPELDGVTAISAGSTHTVALKADGTVWAWGSNLY 628
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG + P+++ L+ VV I+ G+ H+ A+ DG L++WG GQLGLG
Sbjct: 629 GQLG-DGTFTHRSSPVQVPSLEN-VVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTT 686
Query: 161 AAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P+ +SG+ A A G +VA+ G+V +WG SG+LG +++I+
Sbjct: 687 TNQSVPVQ-----VSGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLG---DATII- 737
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
Y+P L+ L V + +AA G+ +A + +G V+ FG
Sbjct: 738 -----QRYSPVLVPGLTNV-IALAAGGYT-TAVLKRDGTVWAFG 774
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 143/375 (38%), Gaps = 103/375 (27%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG G+ +R RPV+ + ++AL+ G HT+ L G + G N GQ
Sbjct: 319 WGNNAYGQLGDGTTLNRLRPVLVAGLT--GVRALSGGVVHTVALKWDGTAWGWGYNSAGQ 376
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S+ P++++ L + V+I G +H+ A DG LY WG N G LG G +
Sbjct: 377 LGNGTTTNSSI-PVQVAALT-QAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTS 434
Query: 163 KVIPI-----------------------------------------------------PT 169
+P+ PT
Sbjct: 435 SSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPT 494
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI------------ 217
V +SGI + A G SVA+ GG V +WG G+LG+G + +
Sbjct: 495 AV-VVSGIV--KTAGGSAHSVALGAGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMSGV 551
Query: 218 -----------------------------LGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
LG + ++ TP+ + EL+GV +AG
Sbjct: 552 IDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELDGVTA--ISAGST 609
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
H+ + +G V+ +G ++ H P + L + G +HT + G
Sbjct: 610 HTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSLENVVSIAAGHFHTVAVKGDGT 669
Query: 309 LYTWGSNENGCLGIG 323
L+ WG G LG+G
Sbjct: 670 LWVWGYGPQGQLGLG 684
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 30/289 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ R PV + A+A G+ T+ L G V+ G+N G+
Sbjct: 219 WGSNAYGQLGDGTNTLRAVPVQVPGMSD--VVAVAAAGSRTVALKADGTVWTWGINSSGE 276
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +SL P+++ L V I+ G H+ A+ DG + WG N+ GQLG G
Sbjct: 277 LGDGTTT-HSLLPIQVPNLSG-VTNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLN 334
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ V L+G+ + + G +VA+ G WG +G+LG+G
Sbjct: 335 RLRPV--LVAGLTGV--RALSGGVVHTVALKWDGTAWGWGYNSAGQLGNG---------T 381
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ P + L V+I A G+ H+ ++G +Y +GD + GN S
Sbjct: 382 TTNSSIPVQVAALT-QAVEIDAGGY-HTLARRQDGTLYAWGDNFYGAL--GTGNTTSS-S 436
Query: 283 LISKLPYSEEVVCG-GYHTCV-------LTSGGELYTWGSNENGCLGIG 323
+ ++P S G GY+ V + L+ WG N NG LG G
Sbjct: 437 VPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDG 485
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 120 GLKKEVVQ--------ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
G+ +EV++ +S G +H+ + G L+ WG N +GQLG G++ + PT+V
Sbjct: 134 GITREVLRNFVQFCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQR--NAPTRV 191
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G E SVAVT G V +WG+ G+LG G + LR+ P +
Sbjct: 192 RGLNQVVSASA--GAEHSVAVTEDGSVWTWGSNAYGQLGDGTNT-----LRAVPVQVPGM 244
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
V +AAAG + + +G V+ +G + ++ H+ P + L
Sbjct: 245 SD-----VVAVAAAGS-RTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVT 298
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G +HT + G ++WG+N G LG G
Sbjct: 299 NIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDG 330
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG ++ R+ PV+ + ALA GG T L G V+A G N GQ
Sbjct: 723 WGYNSSGQLGDATIIQRYSPVLVPGLTN--VIALAAGGYTTAVLKRDGTVWAFGYNPNGQ 780
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S + L VV +S+G +H + D + G NS GQLG G
Sbjct: 781 LGDGTTTSRSSP---TATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQ 837
Query: 163 KVIPIPTKVECLSG 176
+ P P +V L G
Sbjct: 838 R--PTPVQVTNLPG 849
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 259 VYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
V+ F +A ++ GN A+ R L + + + V G YHT + SGG L+ WG+
Sbjct: 112 VHSFVVKASPMIIDSNGNRAKCGITREVLRNFVQFCPSVSPGVYHTLEVKSGGSLWAWGN 171
Query: 315 NENGCLGIG 323
N +G LG G
Sbjct: 172 NPSGQLGNG 180
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 130/286 (45%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3842 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 3901
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 3902 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 3961
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +E L A G Q++ VT V SWG G G+LG G
Sbjct: 3962 DQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4013
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4014 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4070
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP ++ L + + G H T GE++TWG N+ G LG G
Sbjct: 4071 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4116
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 137/287 (47%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT+ G V++ G + G
Sbjct: 2848 GEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2907
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +I +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 2908 KLGHGNSISLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 2966
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A + P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2967 ATQ--SKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG----- 3019
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP LI L G+ V G S + + G V+ +G ++ +H
Sbjct: 3020 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3075
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+L+ L + V G H +T G++Y WG N++G G G
Sbjct: 3076 RKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNG 3122
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + + ++ +ACG H+ +T +G +Y GL ++G+
Sbjct: 2901 WGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 2960
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + S L S + + V+QI+ G + A+T DG +Y WG G+LG G
Sbjct: 2961 LGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGS 3020
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ ++ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3021 DGCYTPL--LIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3075
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3076 ------RKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHG----QQGNGTTI 3125
Query: 279 --RRPSLISKLPYS--EEVVCGGYHT 300
++PSL+ +L + V CG H+
Sbjct: 3126 VNKKPSLVHELDDARVNRVSCGSSHS 3151
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 3895 WGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 3954
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P I L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 3955 LGHGDSED-QLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4012
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K+E L+G+ + G + SVA+T G + +WG G RLGHG + +
Sbjct: 4013 -GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHV-- 4069
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4070 -------RRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQ 4122
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4123 RPRLVHALQGKKITRVACGSAHT 4145
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 117/245 (47%), Gaps = 17/245 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
G H L LT+ VY+ G + G+LG N+ + EP I L +K + I+ G +S+A+
Sbjct: 511 GTHYLALTQDNSVYSWGNGECGRLG-HGNMTWYDEPKLIEALVEKNITFIACGSTYSAAL 569
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG---FEQSVAVTGG 195
+ +GELY WG+ + G+LG G V+ IPT V L+G A G Q++ VT
Sbjct: 570 SSNGELYTWGRGNYGKLGHGNSDKDVM-IPTLVTALNGHMVVYVACGGGRDPQTLCVTAS 628
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G G+LG G TP+++ +L + V G SA +
Sbjct: 629 GIVFSWGDGNHGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGQQFSAALTA 679
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
G VY +G K+ +H R P +I L +++ G H LT +Y WG
Sbjct: 680 YGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739
Query: 314 SNENG 318
N++G
Sbjct: 740 RNDHG 744
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 136/290 (46%), Gaps = 23/290 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV+C + L GG TLF +T G VYATG G
Sbjct: 3789 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 3847
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3848 RLGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 3905
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 3906 GNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 3959
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + TP+LI+ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 3960 -----SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4014
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4015 DGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4064
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 143/297 (48%), Gaps = 23/297 (7%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGCVY 93
Q +WG D +LG G S+ + PV K +A GG+ TLF+ ++ G +Y
Sbjct: 2788 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSKLKPVHIA-GGSKTLFVVSQEGKLY 2845
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKN 150
A G G+LG+ ++ EP I L + V++ + +G H+ A+T DG+++ WG+
Sbjct: 2846 ACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEG 2904
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+LG G + + P +E L + A G S A+T G++ +WG G GRLG
Sbjct: 2905 EDGKLGHGNSIS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 2962
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVD 268
HG + ++ P+L++ L G +V A G + + +G VY +GD
Sbjct: 2963 HGD---------TATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFG 3013
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
K+ + P LI +L ++ CG + LT GE++TWG + LG G
Sbjct: 3014 KLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3070
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 118/243 (48%), Gaps = 21/243 (8%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYM 146
+G +Y G N GQLG E L L +S L+ VQ++ G A+T DG++Y
Sbjct: 3783 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLFAVTADGKVYA 3840
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G + G+LG+G + +PT +E + +F K+ A+ G + +A++ G V SWG G
Sbjct: 3841 TGYGAVGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEG 3898
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGHG L + R P+LI+EL G ++ A G HSA I G +Y +G
Sbjct: 3899 DDGKLGHGNR---LSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGK 3949
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
++ + P LI L + +V CG T +T +++WG + G L
Sbjct: 3950 GRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4009
Query: 321 GIG 323
G G
Sbjct: 4010 GRG 4012
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 23/229 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG+ GRLG G++ P + A + ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 526 WGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGK 585
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTG---YHHSSAITVDGELYMWGKNSNGQLGL- 157
LG + + P ++ L VV ++ G + +T G ++ WG ++G+LG
Sbjct: 586 LGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRG 645
Query: 158 ---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G K K+ V+ L I + G + S A+T G+V +WG G +LGHG E
Sbjct: 646 GCDGSKTPKI------VDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNE 699
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P++I L+ K+K G LH + E+ VY +G
Sbjct: 700 DHV---------RYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 110/280 (39%), Gaps = 52/280 (18%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV + +K L C + L+ G VY + Y E R+ G
Sbjct: 452 PVYYDTISELGIKQLCCTERAVIILSVNGNVYM--------------MYYGSETQRVYGF 497
Query: 122 KKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
++ + + + H A+T D +Y WG G+LG G P +E L
Sbjct: 498 SEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTW--YDEPKLIEALVEKN 555
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G S A++ G++ +WG G G+LGHG + P L+ L G
Sbjct: 556 ITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDV--------MIPTLVTALNGH 607
Query: 239 KVKIAAAG---FLHSACIDENGRVYIFGDRAVDKMLFQEGNH----------ARRPSLIS 285
V A G + C+ +G V+ +GD GNH ++ P ++
Sbjct: 608 MVVYVACGGGRDPQTLCVTASGIVFSWGD----------GNHGKLGRGGCDGSKTPKIVD 657
Query: 286 KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
KL +V CG + LT+ GE+YTWG E+ LG G
Sbjct: 658 KLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHG 697
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G++G+LG G + P + ++ + CG + LT G VY G + +
Sbjct: 634 WGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYK 693
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N + P I LK K++ + G+ H A+T D +Y WG+N +GQ +
Sbjct: 694 LG-HGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQ--IDPAL 750
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
++P PT SG A G QS A
Sbjct: 751 GTIVPEPTLCPTFSGKNVIGLACGPTQSFA 780
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + T+ G V+ G ND GQ
Sbjct: 4053 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4112
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4113 LGDGTTSALQ-RPRLVHALQGKKITRVACGSAHTLA 4147
>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 555
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 125/286 (43%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G LG G+ R PV ++ A+A G HTL LT TG + A G N FG+
Sbjct: 111 WGNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNGFGE 170
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + EP+ ++ + I+ G HS A+T G + WGKN+ GQLG G A
Sbjct: 171 LGDGTTTARN-EPVPVNVPAGTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNA 229
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ V+ G A G S A+T G VL+WG SG++G G
Sbjct: 230 NSTTPV--DVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDGT-------- 279
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T TP + G V A G HS + G V +G + ++ + P
Sbjct: 280 -TTDRSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTP 338
Query: 282 SLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ LP + G H+ LTS G + WG N +G LG G
Sbjct: 339 VDV-NLPPDTTITAITAHDGSHSLALTSTGTILAWGLNSSGELGDG 383
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 124/283 (43%), Gaps = 19/283 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LG G+ PV ++ A+A A++ LT TG V A G N G+
Sbjct: 59 WGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTSTGAVLAWGNNTGGE 118
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N + P+ + V I+ G H+ A+T G L WG N G+LG G
Sbjct: 119 LGDGTNTDRT-TPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNGFGELGDGTTT 177
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A+ P+P V G A G S+A+T G VL+WG G+LG G +
Sbjct: 178 ARNEPVPVNVPA--GTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNA------ 229
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP + G V A G +S + G V +G + ++ +G R
Sbjct: 230 ---NSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQV--GDGTTTDRS 284
Query: 282 SLIS-KLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCL 320
+ + LP V + GG H+ LTS G + WG N +G L
Sbjct: 285 TPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQL 327
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 19/233 (8%)
Query: 96 GLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G NDFGQLG I S P+ + + I+ +S A+T G + WG N+ G+
Sbjct: 60 GENDFGQLGDGTTIDSS-TPVDVDLPAGTTITAIAGSDANSFALTSTGAVLAWGNNTGGE 118
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P+ V+ +G A+G ++A+T G +L+WG G G LG G
Sbjct: 119 LGDGTNTDRTTPV--AVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNGFGELGDGT- 175
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+T+ P + G + A G HS + G V +G ++ +
Sbjct: 176 --------TTARNEPVPVNVPAGTTITAIAGGRGHSLALTSTGTVLAWGKN--NEGQLGD 225
Query: 275 GNHARRPSLIS-KLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G +A + + LP V GG ++ LTS G + WG N +G +G G
Sbjct: 226 GTNANSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDG 278
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G++G G+ R PV ++ A+A G H++ LT G V A GLN GQ
Sbjct: 267 WGLNSSGQVGDGTTTDRSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQ 326
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+ ++ + T + HS A+T G + WG NS+G+LG G
Sbjct: 327 LGDGTTT-DSTTPVDVNLPPDTTITAITAHDGSHSLALTSTGTILAWGLNSSGELGDGTT 385
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ P+ V G G + S+A+T
Sbjct: 386 TNRSTPV--DVNLPPGTTVTAIDNGDDHSMALT 416
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 53 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 112
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 113 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 172
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L S+
Sbjct: 173 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 225
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ H+ R
Sbjct: 226 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 280
Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
P LI + + ++ CG YHT V T+G
Sbjct: 281 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 312
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 125/248 (50%), Gaps = 19/248 (7%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 31 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 88
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S+A
Sbjct: 89 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 147
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG HS
Sbjct: 148 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 199
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
+ G + +G+ ++ GN A+ +P I L V CG HT VLT
Sbjct: 200 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 258
Query: 306 GGELYTWG 313
G+++T+G
Sbjct: 259 DGQVFTFG 266
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 22/218 (10%)
Query: 114 EPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+P R+ +GLK +++ ++G HS + + +Y G NS GQLG +K+ + P
Sbjct: 18 QPRRLEAGTGLK--LLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEP 73
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
++ LS + + G E SVAV G+V +WGAG G+LG G+ I + P
Sbjct: 74 IQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEI--------SFMPT 125
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLIS 285
I L G+K+ + G HS + E+G+V+ +G ++ L + + + SL
Sbjct: 126 KINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-E 184
Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+P ++ V GG H+ L+ G + WG+N +G L +
Sbjct: 185 GIPLAQ-VAAGGTHSFALSLMGTSFGWGNNRSGQLALS 221
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 104 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 163
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 164 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
A + I P + L + + G+E + +T G+V ++G S +L H S
Sbjct: 224 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 279
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 130/286 (45%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3954 GYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4013
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V ++ G HHS+AIT G LY WGK G+LG G
Sbjct: 4014 KLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4073
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4074 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4125
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I+ L G+ V G S + +G +Y +G ++ +H R
Sbjct: 4126 ---SDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVR 4182
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP ++ L + + G H + GE++TWG N+ G LG G
Sbjct: 4183 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG 4228
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 136/287 (47%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT+ G V++ G + G
Sbjct: 2967 GEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDG 3026
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N +P I LK K + ++ G HS+AIT GELY WG G+LG G
Sbjct: 3027 KLG-HGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3085
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3086 NTQLKP--KLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3138
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP L+ L G+ V G S + + G V+ +G ++ +H
Sbjct: 3139 ----SDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3194
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+L+ L + V G H +T G++Y WG N++G G G
Sbjct: 3195 RKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3241
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 25/267 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + + ++ +ACG H+ +T +G +Y GL ++G+
Sbjct: 3020 WGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGK 159
LG + L+P + L + V+Q++ G + A+T DG +Y WG G+LG G
Sbjct: 3080 LGHGDT-NTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3138
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+ V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3139 SDGCYTPL--LVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV-- 3194
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P L++ L G KV A G LH + + G+VY +GD Q+GN +
Sbjct: 3195 -------RKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGST 3243
Query: 279 ---RRPSLISKLPYS--EEVVCGGYHT 300
++PSL+ +L + V CG H+
Sbjct: 3244 IVNKKPSLVHELDDARVNRVSCGSSHS 3270
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 126/265 (47%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4007 WGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGR 4066
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4067 LGHGDSED-QLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4124
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G + +WG G RLGHG + +
Sbjct: 4125 -GSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHV-- 4181
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
PR + L+G K+ A G LH + G V+ +GD D+ +G
Sbjct: 4182 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDN--DEGQLGDGTTCA 4232
Query: 279 -RRPSLISKLPYSE--EVVCGGYHT 300
+RP L+ L + V CG HT
Sbjct: 4233 LQRPRLVHALQGKKITRVACGSAHT 4257
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 136/290 (46%), Gaps = 23/290 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG PV+C + L GG TLF +T G VYATG G
Sbjct: 3901 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 3959
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3960 RLGIGGTDSVMMPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4017
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L G A G S A+T G + +WG G GRLGHG
Sbjct: 4018 GNRLS--YDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4071
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + TP+L++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4072 -----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4126
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4127 DGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHG 4176
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 158/325 (48%), Gaps = 24/325 (7%)
Query: 8 AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCS 66
A + +L D ++ + +R + T Q +WG D +LG G S+ + PV
Sbjct: 2880 ATSVSFLASDWEIVQEQASSQRGVE-TPQHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSE 2937
Query: 67 AFEKHSLKALACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV 125
+ K +A GG+ TLF+ ++ G +YA G G+LG+ ++ G + EP I L + V
Sbjct: 2938 SLSKLKPVHIA-GGSKTLFVVSQEGKLYACGEGTNGRLGLGDD-GNACEPKPIPFLSQYV 2995
Query: 126 VQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
++ + +G H+ A+T DG ++ WG+ +G+LG G ++ + P +E L +
Sbjct: 2996 IKKVAVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSS--LDKPRLIESLKSKRIRDV 3053
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G S A+T G++ +WG G GRLGHG + ++ P+L++ L G +V
Sbjct: 3054 ACGSGHSAAITSSGELYTWGLGEYGRLGHGD---------TNTQLKPKLVQSLVGQRVIQ 3104
Query: 243 AAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
A G + + +G VY +GD K+ + P L+ +L ++ CG
Sbjct: 3105 VACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQ 3164
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
+ LT GE++TWG + LG G
Sbjct: 3165 FSLALTKYGEVWTWGKGDYFRLGHG 3189
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G H L LTE VY+ G D G+LG + Y L S + K + I+ G +S+A++
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALS 574
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
+GELY WG+ + G+LG G + + +PT V L+G A G Q++ VT G
Sbjct: 575 SNGELYTWGRGNYGRLGHGN--SDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGI 632
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G TP+++ +L + V G SA + G
Sbjct: 633 VFSWGDGDYGKLGRGG---------CNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG 683
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G ++ H R P I L +E+ G H LT +Y WG N
Sbjct: 684 EVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRN 743
Query: 316 ENG 318
+ G
Sbjct: 744 DYG 746
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 126/299 (42%), Gaps = 38/299 (12%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
S TLQ A WG+ +G G GS P C A + +K L C + L+ +G
Sbjct: 432 SQTLQEVLA--WGSVKFG--GTGS-----SPFYCDAIAELGIKQLCCTERALMILSTSGN 482
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY---HHSSAITVDGELYMWG 148
VY Q P R+ G + V + + H A+T D +Y WG
Sbjct: 483 VYMMYYGSETQY-----------PQRVYGFSDKFVAMIASHPDGKHYLALTEDSSVYSWG 531
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G+LG G + P +E L A G S A++ G++ +WG G GR
Sbjct: 532 NGDGGRLGHGDRTW--YEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGR 589
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRA 266
LGHG ++ P L+ L G + A +G + C+ +G V+ +GD
Sbjct: 590 LGHGNSDDVM---------VPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGD 640
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
K+ N ++ P ++ KL +V CGG + LT+ GE+YTWG E LG G
Sbjct: 641 YGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHG 699
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 21/249 (8%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITV 140
TL +G +Y G N GQLG E L L +S L+ VQ++ G A+T
Sbjct: 3889 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP--VQLTGGEQTLFAVTA 3946
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG++Y G + G+LG+G + +PT +E + +F K+ A+ G + +A++ G V
Sbjct: 3947 DGKVYATGYGAVGRLGIG--GTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4004
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG L + R P+LI+EL G ++ A G HSA I G
Sbjct: 4005 YSWGEGDDGKLGHGNR---LSYDR------PKLIEELLGTEIVDVACGGHHSAAITSAGW 4055
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGS 314
+Y +G ++ + P L+ L + +V CG T +T +++WG
Sbjct: 4056 LYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD 4115
Query: 315 NENGCLGIG 323
+ G LG G
Sbjct: 4116 GDYGKLGRG 4124
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 111/252 (44%), Gaps = 23/252 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G P + + ++ +ACG ++ L+ G +Y G ++G+
Sbjct: 530 WGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGR 589
Query: 103 LGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGL-- 157
LG N + P +S L + V +G + +T G ++ WG G+LG
Sbjct: 590 LG-HGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG 648
Query: 158 --GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K K+ V+ L I + G + S A+T G+V +WG G + RLGHG E
Sbjct: 649 CNGSKTPKI------VDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEE 702
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ P+ I+ L+ KVK G LH + E+ VY +G ++ G
Sbjct: 703 HV---------RYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQIDPALG 753
Query: 276 NHARRPSLISKL 287
P+L L
Sbjct: 754 TIVSEPTLCPTL 765
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + A + + +ACG AHTL
Sbjct: 4217 WGDNDEGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHTL 4258
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 135/280 (48%), Gaps = 19/280 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +YG+ PV E ++ A+A G +L + G V+A G+N+ G
Sbjct: 115 IWGHTNYGQRKSDVYRDFTTPVKVK--ELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHG 172
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LGI + S P+++ GLK +VV +S G +HS A+ DG ++ WG N +G+LG
Sbjct: 173 ELGIGS-LKPSAVPVKVKGLK-DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTE 230
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P +V+ LS + A GF S+A+ G V WG G + G S
Sbjct: 231 DYTVSVPVRVKGLSDVIAISAG-GF-HSIALNKDGAVWIWGGGIIEKNGKIDNS------ 282
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
Y P I+ L KV AAG+ HS + ++G V+++G + + G H+ P
Sbjct: 283 -----YIPVRIRWLN--KVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLP 335
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L V G H+ LT G ++ WG+N G LG
Sbjct: 336 VQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLG 375
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 148/328 (45%), Gaps = 59/328 (17%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ YG LG E + PV + ++ A+A G H++ LT+ G ++A G N FG
Sbjct: 315 VWGHNSYGVLGSNVGEHSFLPVQVKGLK--NVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372
Query: 102 QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG EN +SL P ++ L VV I+ G H+ AI DG ++ WG N+ GQLG G
Sbjct: 373 QLG-RENNSFSLNLPYKVKWLD-NVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTY 430
Query: 161 AAKVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWG--------------- 202
+ IP C+ G+ +A L G + S+AV G V WG
Sbjct: 431 KSSYIP-----TCVKGL--NKAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDIL 483
Query: 203 ----------------AGGSGRL----------GHGQESSILGFLRSTSEYTPRLIKELE 236
AGG + G G + F S+ +LI+ L+
Sbjct: 484 SPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIR-LD 542
Query: 237 GVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
+K V+ AAG+ HS + +G V+ +GD +D + N + +P I L +V
Sbjct: 543 NIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKE-KYLNFSEKPVKIKGLSGVVKVAA 601
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G YH+ L G +++WG N G LG G
Sbjct: 602 GKYHSLALKKDGTVWSWGYNAYGQLGNG 629
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 139/282 (49%), Gaps = 25/282 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ + PV + + A++ G H+L L + G V+ G ++GQ
Sbjct: 66 WGYNGFGQLGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQ 123
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
++ P+++ L K +V I+ G+ S A+ DG ++ WG N++G+LG+G +
Sbjct: 124 RKSDVYRDFT-TPVKVKEL-KNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIG--SL 179
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K +P KV+ L + A G S+A+ G V SWG G LG+ R
Sbjct: 180 KPSAVPVKVKGLKDVVAVSA--GLYHSLALKRDGTVWSWGYNEDGELGN----------R 227
Query: 223 STSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T +YT P +K L V + I+A GF HS ++++G V+I+G ++K + +++
Sbjct: 228 PTEDYTVSVPVRVKGLSDV-IAISAGGF-HSIALNKDGAVWIWGGGIIEKN--GKIDNSY 283
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P I L + G H+ L G ++ WG N G LG
Sbjct: 284 IPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLG 325
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 133/321 (41%), Gaps = 68/321 (21%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G LG+GSL+ PV + + A++ G H+L L G V++ G N+ G+
Sbjct: 166 WGINNHGELGIGSLKPSAVPVKVKGLK--DVVAVSAGLYHSLALKRDGTVWSWGYNEDGE 223
Query: 103 LGISENIGYSLE-PLRISGLK--------------------------------------- 122
LG Y++ P+R+ GL
Sbjct: 224 LGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSY 283
Query: 123 --------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
+VV I+ GY HS A+ DG +++WG NS G LG +P+ +V+ L
Sbjct: 284 IPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPV--QVKGL 341
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
+ A G SVA+T G + +WG G+LG S L P +K
Sbjct: 342 KNVVA--VAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNL--------PYKVKW 391
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEE 292
L+ V V IAA G H+ I +G V+ +G A +K G + P+ + L +
Sbjct: 392 LDNV-VAIAAGGS-HTLAIKRDGTVWSWG--ANNKGQLGNGTYKSSYIPTCVKGLNKAVL 447
Query: 293 VVCGGYHTCVLTSGGELYTWG 313
V G H+ + G ++ WG
Sbjct: 448 VEAGSQHSLAVDKDGTVWVWG 468
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 25/207 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
+++++A G H+L + G V++ G D + + +S +P++I GL VV+++ G
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWG--DTNLDNKEKYLNFSEKPVKIKGLSG-VVKVAAG 602
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+HS A+ DG ++ WG N+ GQLG G + +P+ +V+ L+ + A G S+A
Sbjct: 603 KYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPV--RVKGLNNVVA--IAAGDYHSMA 658
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLH 249
+ G V WG+ G+LG R E++ P +++L+ V V I AAG H
Sbjct: 659 LKKDGTVWVWGSNIRGQLG-----------RRNIEFSTVPLKVEKLDNV-VAI-AAGDTH 705
Query: 250 SACIDENGRVYIFG---DRAVDKMLFQ 273
S + ++G V+++G DR + K +
Sbjct: 706 SVALKKDGTVWVWGIECDRDLSKEILS 732
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 135/338 (39%), Gaps = 85/338 (25%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +G+LG + S P + ++ A+A GG+HTL + G V++ G N+ G
Sbjct: 366 WGNNAFGQLGRENNSFSLNLPYKVKWLD--NVVAIAAGGSHTLAIKRDGTVWSWGANNKG 423
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--------KNSNG 153
QLG + S P + GL K V+ + G HS A+ DG +++WG KN+
Sbjct: 424 QLG-NGTYKSSYIPTCVKGLNKAVL-VEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKD 481
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L P+P K+ L+ I + A G + + + G + WG G
Sbjct: 482 ILS---------PLPIKIGKLNDI--TEIAGGLDYILVLRKDGNI--WGCG--------N 520
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDK--- 269
+ F S+ +LI+ L+ +K V+ AAG+ HS + +G V+ +GD +D
Sbjct: 521 DFYFRKFTDSSVSSVTKLIR-LDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKEK 579
Query: 270 -MLFQE-----------------------------------------GNHARR----PSL 283
+ F E GN R P
Sbjct: 580 YLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVR 639
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L + G YH+ L G ++ WGSN G LG
Sbjct: 640 VKGLNNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLG 677
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ E+ + PV +++ A+A G H++ L + G V+ G N GQ
Sbjct: 618 WGYNAYGQLGNGTRETSFVPVRVKGL--NNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQ 675
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG NI +S PL++ L VV I+ G HS A+ DG +++WG + L ++
Sbjct: 676 LG-RRNIEFSTVPLKVEKLD-NVVAIAAGDTHSVALKKDGTVWVWGIECDRDLSKEILSS 733
Query: 163 KVIPIPTK 170
IP+ K
Sbjct: 734 SSIPVQIK 741
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ G +V+ G H+ AI DG ++ WG N GQLG G IP+ +V+ L
Sbjct: 36 ELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPV--RVKGLKD 93
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ A G S+A+ G V W G +GQ S R + TP +KEL+
Sbjct: 94 VVAVSA--GTFHSLALKKDGSVWIW-----GHTNYGQRKS--DVYRDFT--TPVKVKELK 142
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
+ V I AAG+ S + +G V+ +G ++ + P + L V G
Sbjct: 143 NI-VAI-AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAG 200
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
YH+ L G +++WG NE+G LG
Sbjct: 201 LYHSLALKRDGTVWSWGYNEDGELG 225
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
++A+ G V +WG G G+LG+G ++S I P +K L+ V +A
Sbjct: 53 HTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCI-----------PVRVKGLKDVVA--VSA 99
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
G HS + ++G V+I+G + P + +L + G + + S
Sbjct: 100 GTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKVKELKNIVAIAAGWDFSLAVGS 159
Query: 306 GGELYTWGSNENGCLGIG 323
G ++ WG N +G LGIG
Sbjct: 160 DGSVWAWGINNHGELGIG 177
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
Length = 514
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 139/292 (47%), Gaps = 34/292 (11%)
Query: 44 GNGDYGRLGLGSLES--------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
G G G LGLG+ + + PV+ + H GG H + LT G VY+
Sbjct: 182 GKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHP------GGRHAMALTAEGKVYSW 235
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G D GQLG +GY L+P I LK KEV +I+ G HS A+ DG+++ WG SNG
Sbjct: 236 GCGDRGQLGHGNTLGY-LDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGA 294
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G A++ +P K+ L+G A G ++AV G V SWG GG+G LG+G E
Sbjct: 295 LGHGNNLAQL--LPKKIMSLNGKHIMAVACGECYTIAV-AGDDVWSWGLGGNGELGYGVE 351
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S Y P I+ L + A G+ S + NG+V+ +G + D+
Sbjct: 352 MP--------SYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWG--SGDRFRLGL 401
Query: 275 GNHA--RRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
GN +P I K + VV +H + G++Y WGS E G +G
Sbjct: 402 GNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVG 453
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 116/227 (51%), Gaps = 14/227 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ P + + + +ACG H++ + G +++ G G
Sbjct: 235 WGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGA 294
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N+ L P +I L K ++ ++ G ++ A+ D +++ WG NG+LG G +
Sbjct: 295 LGHGNNLA-QLLPKKIMSLNGKHIMAVACGECYTIAVAGD-DVWSWGLGGNGELGYGVEM 352
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+PTK+E L A G+ S AV+ GKV +WG+G RLG G E I+
Sbjct: 353 PSYY-MPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIV--- 408
Query: 222 RSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
PR I+ +L+G K+K A H+ IDENG+VYI+G + +
Sbjct: 409 ------KPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEI 449
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 5/175 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G G LG G+ ++ P + + A+ACG +T+ + V++ GL G+
Sbjct: 287 WGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGDD-VWSWGLGGNGE 345
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + P +I L K + ++ GY S A++ +G+++ WG +LGLG +
Sbjct: 346 LGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNE- 404
Query: 162 AKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
KVI P +++ L G K+ ++A+ G+V WG+ G +G+ +++
Sbjct: 405 -KVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGNDEDA 458
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 22/188 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
E+Y+WG N L +K P+ P K + L + A G++ V+ G + +
Sbjct: 126 EVYVWGSKRNLLLAADEKN----PLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFAC 181
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G G LG G + PR I +L V V A G H+ + G+V
Sbjct: 182 GKGHMGCLGLGNCDDV---------NVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKV 232
Query: 260 YIFGDRAVDKMLFQEGNHA--RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
Y +G D+ GN P+LI +L E ++ CG H+ + S G++++WG
Sbjct: 233 YSWG--CGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDG 290
Query: 316 ENGCLGIG 323
NG LG G
Sbjct: 291 SNGALGHG 298
>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
catus]
Length = 993
Score = 117 bits (292), Expect = 9e-24, Method: Composition-based stats.
Identities = 98/326 (30%), Positives = 157/326 (48%), Gaps = 35/326 (10%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI G + + ++ + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPTVLSCGDEHTAVVTGNKKLY--MFGSNNWGQLGLGSKSTVSKPTCVKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
+K ACG HTL TE G VYA G N+ GQLG+ E + L S + ++
Sbjct: 86 PEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTS--QHKIK 143
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q+S G + S+A+T DGEL+MWG NS GQ+GL K + +P +V G + G+
Sbjct: 144 QLSAGSNTSAALTEDGELFMWGDNSEGQIGL--KDVTNVCVPQQVTV--GKPISWISCGY 199
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AA 244
S VT G++ ++G SG+LG L + R+ + + G+ K+ A
Sbjct: 200 YHSAFVTTEGELYTFGEPESGKLG----------LPNQLLCNHRMPQPVPGIPEKVVQVA 249
Query: 245 AGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
G H+ + E VY FG + LF+ P +I + + + CG
Sbjct: 250 CGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFE----TSVPKVIEHVKDQKISSISCGE 304
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
HT ++T G +YT+G G LG+G
Sbjct: 305 NHTALITDIGLMYTFGDGRYGKLGLG 330
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 25/228 (10%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTRFAENI-----PSKFWFKNDIPTVLSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS--- 216
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNT 129
Query: 217 --ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
++ F TS++ K+K +AG SA + E+G ++++GD + ++ ++
Sbjct: 130 FHLISFF--TSQH-----------KIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKD 176
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ P ++ + CG YH+ +T+ GELYT+G E+G LG+
Sbjct: 177 VTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGL 224
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G YG+LGLG + +++ P +CS F + + ++CGG H L
Sbjct: 319 FGDGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCGGCHML 362
>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1100
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 138/307 (44%), Gaps = 46/307 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG HT +T +G +Y G +F
Sbjct: 328 WGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNF 387
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 388 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 446
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + IP +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 447 DR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 504
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 505 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS-- 553
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 554 --PVYGQLGN----PQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGA 607
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 608 NGRLGHG 614
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E++ P +A + + +ACG + T+ LT +G VY G +GQ
Sbjct: 499 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQ 558
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G P R+ G K V +I+ G +H + +T E+Y WGK +NG+LG G
Sbjct: 559 LGNPQADGKL--PNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDT 616
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ P+ VE L K A G + A+
Sbjct: 617 DDRN--FPSLVEALKDKQVKSIACGTNFTAAI 646
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 29/208 (13%)
Query: 131 GYHHSSAITVDGELYMWGKNSNGQL----------GLGKKAAKVIPIPTKVECLSGIFTK 180
G+ S A+ G++++WG+ + + G G K ++P +E + +
Sbjct: 253 GHDDSDAL---GDVFIWGEGTGDGVLGGGAHRAGSGFGVKLDSLLP--KALESTVVLDVQ 307
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G + VT G+V SWG GRLGHG +S +L P+LI L + +
Sbjct: 308 NIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIDSLSNINI 358
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVC 295
++ A G H+ + +G +Y +GD + L GN P ++ + + + C
Sbjct: 359 ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 418
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G +HT V+TS G+L+T+G G LG G
Sbjct: 419 GPWHTAVVTSSGQLFTFGDGTFGVLGHG 446
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG HT + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 18/258 (6%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
S + +G + +G + ++ GN+A +P I L + CG HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Query: 304 TSGGELYTWGSNENGCLG 321
T G+++T+G N G LG
Sbjct: 252 TQDGKVFTFGDNSYGQLG 269
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
G HS + E+G+V+ +G + ++ F +R + +P ++ V GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L+ G + WGSN G L +
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALS 216
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG--SGRLGH-GQE 214
A K P VE + G+ + Q G + ++A + G+V+S+G G + R H G E
Sbjct: 272 PTAEKR--GPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SS + L S K+L V+VK AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352
>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
musculus]
gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 746
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 138/274 (50%), Gaps = 12/274 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +P A + ++CG H+L + G V+A G+ GQL
Sbjct: 54 GDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQL 113
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + P +I L +++QIS GY+HS A++ DG+++ WGKNS+GQLGLG++
Sbjct: 114 GTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFP 173
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG +G+L + ++
Sbjct: 174 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLV---- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y PR + L+ + V + G+ H+A + +N +V+ FGD + ++ + P
Sbjct: 229 --QSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTGPQ 286
Query: 283 LISKL--PYSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ + P S ++ CG YHT + + G++ ++G
Sbjct: 287 LVEGIGGPVS-QIDCGSYHTLAYVYTTGQVVSFG 319
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 16/251 (6%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHS 135
A G H L L V+A G N GQLG G EP++ + + V +S G HS
Sbjct: 35 ASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQ-ALVNLPVDLVSCGKEHS 93
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S+GQLG GK ++ IP K++ L+GI Q + G+ S+A++
Sbjct: 94 LAVCHKGKVFAWGVGSDGQLGTGK-FEEICFIPQKIKALTGIKIIQISCGYYHSLALSKD 152
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V SWG G+LG GQE S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 153 GQVFSWGKNSHGQLGLGQEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 204
Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
+G + +G+ + ++ F N + +P + L + CG HT VLT +++
Sbjct: 205 SGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVF 264
Query: 311 TWGSNENGCLG 321
T+G N G LG
Sbjct: 265 TFGDNSFGQLG 275
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 21/256 (8%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG G E + P A + ++CG H+L L++ G V++ G N G
Sbjct: 105 WGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHG 164
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQL
Sbjct: 165 QLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGN 224
Query: 161 AAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
V P V L + + G+E + +T +V ++G G+LGH S G
Sbjct: 225 NVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTG 284
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+L++ + G +I + A + G+V FG +E +H
Sbjct: 285 ---------PQLVEGIGGPVSQIDCGSYHTLAYVYTTGQVVSFG---------REPSHTS 326
Query: 280 RPSLISKLPYSEEVVC 295
P+ + ++ C
Sbjct: 327 NPTHPETPSENSDISC 342
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G H+ + + ++ G NS GQ LG++ A P ++ L + +
Sbjct: 31 LLQAASGERHALLLLTNQVVHACGDNSGGQ--LGRRGAPSGKQPEPIQALVNLPVDLVSC 88
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV GKV +WG G G+LG G+ I + P+ IK L G+K+ +
Sbjct: 89 GKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEIC--------FIPQKIKALTGIKIIQIS 140
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHT 300
G+ HS + ++G+V+ +G + ++ L QE P + L P + +V GG H+
Sbjct: 141 CGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLA-QVAAGGAHS 199
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L+ G + WG+N G L
Sbjct: 200 FALSLSGTSFGWGNNSAGQLAFS 222
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V++ G N +GQLG +
Sbjct: 76 GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
I + L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQA- 193
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
IP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 194 -IPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG G++ P + + + +ACG H+L LT G V+A G N+ G
Sbjct: 123 WGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G ++ P R++G K VV I+ G S A+ GE+Y+WG N NGQLGLG
Sbjct: 183 QVGSGSTANQAI-PRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P +V L GI ++ A G+ ++ +T G+V +WGA G+LG G
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+S Y ++ E + + ++IAA H SA + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 21/269 (7%)
Query: 64 VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+CS E ++ AC G L+ T ++ G N G LG+ + + +LEP R+
Sbjct: 36 LCSEEELQVIRQ-ACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGD-VQSTLEPRRLD 93
Query: 120 GL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
L K++ +S G H T +GE++ WG N+ GQLG G ++P LS
Sbjct: 94 SLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTN-LSNK 152
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 153 QVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQAIPRRVTGCLQ 203
Query: 238 VKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
KV + A G + S + + G VY++G ++ + P ++ L + V
Sbjct: 204 NKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVA 263
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG HT VLT G++Y WG+N G LG G
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 341 --SVTLPHLTHFSCTDDVF 357
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 39/297 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+ G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N G
Sbjct: 144 MLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDG 203
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + ++ Q+S G + S+A+T DGELYMWG NS GQ+GL +
Sbjct: 204 QLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASE 263
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P + G + G+ S VT G++ ++G +G+LG L
Sbjct: 264 SNVCVP----CRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKLG-------LSS 312
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------------DRA 266
+ + P+L+ + G KV A G H+ + E VY FG + +
Sbjct: 313 EQLKNHRIPQLVPGISG-KVNQVACGGGHTVALTEED-VYTFGLGEFGQLGLGTCIFETS 370
Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V K++ H R+ K+ Y V CG HT +++ G +YT+G +G LG+G
Sbjct: 371 VPKVV----EHLRK----QKIHY---VACGENHTALISDTGLMYTFGDGRHGKLGLG 416
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 126/262 (48%), Gaps = 30/262 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST- 130
+L L+CG HT F+T +Y G N++GQLG+ + +P + LK E V+ +
Sbjct: 122 TLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVN-KPTCVKALKPEKVKFAAC 180
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALG 185
G +H+ T G +Y G NS+GQLGLG + T +S FT KQ + G
Sbjct: 181 GRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEER-----TTFHQIS-FFTSRYKIKQLSAG 234
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S A+T G++ WG G++G ES++ R + G V +
Sbjct: 235 SNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRV-----------VIGKPVSWVSC 283
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLP-YSEEVVCGGYHTC 301
G+ HSA + +G +Y FG+ K+ Q NH R P L+ + +V CGG HT
Sbjct: 284 GYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNH-RIPQLVPGISGKVNQVACGGGHTV 342
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LT ++YT+G E G LG+G
Sbjct: 343 ALTE-EDVYTFGLGEFGQLGLG 363
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 113/224 (50%), Gaps = 17/224 (7%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + + Q+S G H++ +T + +LYM G N+ GQLGLG
Sbjct: 103 FGKSKFAENI-----PSKFWLRNDTLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGS 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + PT V+ L K AA G ++ T GG V + G G+LG G
Sbjct: 158 KT--TVNKPTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTT 215
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHA 278
F S +T R K+K +AG SA + E+G +Y++GD + ++ L E N
Sbjct: 216 F-HQISFFTSRY-------KIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVC 267
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ P S V CG YH+ ++T+ GELYT+G ENG LG+
Sbjct: 268 VPCRVVIGKPVS-WVSCGYYHSALVTTDGELYTFGEPENGKLGL 310
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+G G++G+LGLG+ + P V K + +ACG HT +++TG +Y G G
Sbjct: 352 FGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHG 411
Query: 102 QLGISE 107
+LG+ E
Sbjct: 412 KLGLGE 417
>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1096
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG GS +R P+ + S+ A+ G H+L L G V++ G N GQ
Sbjct: 71 WGGNNYGQLGTGS--TRQNPMPARVWRLFSITAIGAGELHSLALKSDGTVWSWGANTNGQ 128
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I S+ P + GL VV I+ G+ HS + DG ++ WG N+ GQLG G
Sbjct: 129 LGDGTLISRSV-PAPVPGLTN-VVAIAAGFSHSMVLKADGTVWAWGLNAAGQLGDGTPTR 186
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+G+ K A G S+A+T G++ +WG G+LG G ++G R
Sbjct: 187 RLTPV--QVLGLTGV--KDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGD---LVG--R 237
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
ST+ P + V + G HS + +G V+ +G ++ P+
Sbjct: 238 STAAALPGM------TGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPT 291
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L V GG H+ L G ++ WGSN LG G
Sbjct: 292 QVPGLTEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDG 332
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 132/283 (46%), Gaps = 22/283 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV +K +A G H+L LT G ++ G N GQ
Sbjct: 171 WGLNAAGQLGDGTPTRRLTPVQVLGLT--GVKDIAAGNVHSLALTADGRLWTWGGNVDGQ 228
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +G S + G+ VV +S G HS + +DG ++ WGKN GQLGLG +
Sbjct: 229 LGTGDLVGRSTA-AALPGMTG-VVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVS 286
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P PT+V L+ + G + SVA+ G V +WG+ +LG G +
Sbjct: 287 T--PTPTQVPGLTEMVAVTG--GGQHSVALRVDGTVWAWGSNARAQLGDGTQ-------- 334
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
T +P + L VK +AA G LHS + NG V+ +G + ++ +G + +
Sbjct: 335 -TQRLSPCQVTGLTQVK-GVAAGGGLHSVAVKGNGEVWAWGSNSEGQV--GDGTYLMKLV 390
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ L +V GG HT L G + WG N LG G
Sbjct: 391 PTTARVLVERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDG 433
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 121/245 (49%), Gaps = 23/245 (9%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
H+L L G V++ G N++GQLG + P R+ L + I G HS A+ D
Sbjct: 58 HSLVLKADGTVWSWGGNNYGQLGTGSTRQNPM-PARVWRLF-SITAIGAGELHSLALKSD 115
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G ++ WG N+NGQLG G ++ +P P V L+ + A GF S+ + G V +W
Sbjct: 116 GTVWSWGANTNGQLGDGTLISRSVPAP--VPGLTNVVAIAA--GFSHSMVLKADGTVWAW 171
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G +G+LG G T TP + L G VK AAG +HS + +GR++
Sbjct: 172 GLNAAGQLGDGTP---------TRRLTPVQVLGLTG--VKDIAAGNVHSLALTADGRLWT 220
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENG 318
+G VD L G+ R S + LP VV GG H+ +L G +++WG N+ G
Sbjct: 221 WGGN-VDGQL-GTGDLVGR-STAAALPGMTGVVALSGGGSHSLILKMDGSVWSWGKNDAG 277
Query: 319 CLGIG 323
LG+G
Sbjct: 278 QLGLG 282
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 18/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLGS+ S P + + A+ GG H++ L G V+A G N Q
Sbjct: 271 WGKNDAGQLGLGSVVSTPTPTQVPGLTE--MVAVTGGGQHSVALRVDGTVWAWGSNARAQ 328
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P +++GL + + G HS A+ +GE++ WG NS GQ+G G
Sbjct: 329 LGDGTQT-QRLSPCQVTGLTQVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTYLM 387
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K++P +V + + G ++A+ G WG +LG G
Sbjct: 388 KLVPTTARVL----VERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDG---------- 433
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ P ++ L +V +AG HS + E+G V+ +G + + +P
Sbjct: 434 -TTTARPLPVQVLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQPV 492
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S + V G +H+ L+ G ++ WG N G LG G
Sbjct: 493 KVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQLGDG 533
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 132/277 (47%), Gaps = 23/277 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG G+L R PV + +A+A G H L L G V + G N G+LG
Sbjct: 778 GQLGDGTLFPRAEPVPVIGLSE--CRAIAGGATHGLALKTDGRVLSWGANAEGELGDGTT 835
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
+ + G V+ I+ G HS A+ DG + WG N GQLG G ++V+P+
Sbjct: 836 VARRAP--AVVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPV- 892
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+V+ L+G+ A GF S+A+ G V +WG G+LG LRS
Sbjct: 893 -RVQGLTGVAAIAAGDGF--SLALKHDGTVWAWGGNTLGQLGDNTT------LRS---LV 940
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK 286
P + L GV AAG HS + +G ++ +G ++ +G AR+ P ++
Sbjct: 941 PVRTQALTGVTA--VAAGRNHSLALKGDGTLWAWGSNTYGEL--GDGTQARKLAPVQVTS 996
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + G +H+ +TSGG+++ WG N+ G +G G
Sbjct: 997 LTGVSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKG 1033
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG G+ +R P V + ++A G H+L L G V A G N GQ
Sbjct: 822 WGANAEGELGDGTTVARRAPAVVGPLA--GVLSIAVGARHSLALLGDGSVQAWGSNIQGQ 879
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+R+ GL V I+ G S A+ DG ++ WG N+ GQLG
Sbjct: 880 LGDGTTVSRVL-PVRVQGLTG-VAAIAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLR 937
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++P+ + + L+G+ A G S+A+ G G + +WG+ G LG G ++ L
Sbjct: 938 SLVPV--RTQALTGV--TAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKL---- 989
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRP 281
P + L GV AG HS + G+V+ +G ++ + N P
Sbjct: 990 -----APVQVTSLTGVSAL--DAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLP 1042
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + L + V GG H+ L S ++ WG + G LG G
Sbjct: 1043 AQVPGLTSAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTG 1084
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 131/289 (45%), Gaps = 35/289 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLND 99
WG+ G+LG G++ P + F +L+ +LA GG H+L L G V+ G D
Sbjct: 522 WGDNSLGQLGDGTVT----PTRNAPFRVPNLEGVVSLAAGGEHSLALKADGTVWVWGRQD 577
Query: 100 FGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
EN+G L P ++ GL + V + G HS + DG L+ WG+N+ GQL G
Sbjct: 578 --TCADPENVGRVLRVPEQVQGLT-DAVAVRAGRCHSVVLRADGTLWAWGRNAEGQLADG 634
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +V+ L+G+ + ++G EQ++A+ G +WG G+LG G L
Sbjct: 635 TFTDRM--TPARVDGLTGVISF--SVGSEQTLALKADGTAWAWGPNAQGQLGGG-----L 685
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
R+ P L V+ A G +H+ + ++ ++ +G A D L +
Sbjct: 686 SVPRTRPTQVPTL------TDVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALDWQ 739
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S L S + ++ + G + + G+N +G LG G
Sbjct: 740 AAPVR-----SGLAASRGLAAATQYSLGIALDGSVQSTGANASGQLGDG 783
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 125/324 (38%), Gaps = 56/324 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G R RP ++ +A G H L L + ++A G N GQ
Sbjct: 673 WGPNAQGQLGGGLSVPRTRPTQVPTLTD--VRTVAMGAVHALVLKDDLTLWAWGSNAEGQ 730
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + + P+R SGL ++ +S I +DG + G N++GQLG G
Sbjct: 731 VGDGA-LDWQAAPVR-SGLAASR-GLAAATQYSLGIALDGSVQSTGANASGQLGDGTLFP 787
Query: 163 KVIPIPT--KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-----QES 215
+ P+P EC + A G +A+ G+VLSWGA G LG G +
Sbjct: 788 RAEPVPVIGLSEC------RAIAGGATHGLALKTDGRVLSWGANAEGELGDGTTVARRAP 841
Query: 216 SILGFL------------------------------------RSTSEYTPRLIKELEGVK 239
+++G L + S P ++ L GV
Sbjct: 842 AVVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQGLTGVA 901
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
A GF S + +G V+ +G + ++ + P L V G H
Sbjct: 902 AIAAGDGF--SLALKHDGTVWAWGGNTLGQLGDNTTLRSLVPVRTQALTGVTAVAAGRNH 959
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L G L+ WGSN G LG G
Sbjct: 960 SLALKGDGTLWAWGSNTYGELGDG 983
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG LG G+ + PV ++ + AL G H+L +T G V+ G N FGQ
Sbjct: 972 WGSNTYGELGDGTQARKLAPVQVTSLT--GVSALDAGDHHSLAVTSGGKVWGWGRNQFGQ 1029
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G + L P ++ GL V ++ G HS A+ D ++ WG GQLG G
Sbjct: 1030 VGKGVKSNWQLLPAQVPGLTSAVA-VAGGGEHSLALLSDRSVWAWGHGDMGQLGTGMSNL 1088
Query: 163 KVIPI 167
++ P+
Sbjct: 1089 RLSPV 1093
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P A + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++++ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 16/249 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSA 137
G L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H
Sbjct: 55 GNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDALSGKKIACLSYGSGPHIVL 113
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
T +GE++ WG N+ QLG G ++P LS + A G S+ +T G+
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNKQVTEVACGSYHSLVLTSDGE 172
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDEN 256
V +WG SG++G G + ++ PR + KV + A G + S +
Sbjct: 173 VFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNT 223
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
G VY++G ++ + P I+ L + V CG HT VLT G++Y WG+
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGA 283
Query: 315 NENGCLGIG 323
N G LG G
Sbjct: 284 NSYGQLGTG 292
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +V+I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PAPVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 156/311 (50%), Gaps = 30/311 (9%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+ T ++ WG G++G+LGL + +++ P ++ + + ++ L++ G
Sbjct: 36 FTDTPPQKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDG 95
Query: 91 CVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWG 148
VY G N G LG + +++ +P + L+ ++ QIS G H +AI+ DGELY WG
Sbjct: 96 KVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWG 155
Query: 149 KNSNGQLG--LGKKAAKV--------------IPIPTKVECLSGIFTKQAALGFEQSVAV 192
+G+LG + +K+ KV +PTKV+ L+GI KQ + G + +V +
Sbjct: 156 NKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVL 215
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V S+G G+LG+ E T + P+ I +L+ + + I G SA
Sbjct: 216 TENGEVYSFGNSMKGQLGYQSE--------ETGNFQPKKIPDLQNI-INI-DCGQQFSAA 265
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ +G+VY +G+ ++ + + RP+ ++ ++ + CG L++ G+L+
Sbjct: 266 VSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLF 325
Query: 311 TWGSNENGCLG 321
TWG +G LG
Sbjct: 326 TWGYGNDGQLG 336
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 108/215 (50%), Gaps = 13/215 (6%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+GN G+LG S E+ ++P + ++ + CG + ++ +G VY G ND G
Sbjct: 224 FGNSMKGQLGYQSEETGNFQPKKIPDLQ--NIINIDCGQQFSAAVSSSGKVYTWGNNDHG 281
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG +++I Y P +++G +++ IS G + +A++ +G+L+ WG ++GQLG +
Sbjct: 282 QLGNNQSI-YQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNR 340
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P ++E I + G + +T ++ +G G G+LG G+
Sbjct: 341 ND--LYAPKQIEFKEKII--KVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAA 396
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+R+ TP++++ + +KV G ++ I E
Sbjct: 397 IRT----TPKIVEFFKKMKVVDVTCGGEYTLAITE 427
>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
Length = 677
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT G++ ++G +G+LG + I + +P+ + + ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285
Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
+A G H+ + E VY FG + LF+ P +I ++ + +
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG HT ++T G +YT+G +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F K +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVF 402
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 138/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P ++ + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 64 VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
+CS E S++ AC G L+ T ++ G N G LGI + I ++EP R++
Sbjct: 36 LCSEEELQSIRQ-ACVFGSAGNEVLYTTVDDEIFVLGTNCSGCLGIGD-IQSTIEPRRLN 93
Query: 120 GLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
L K++ +S G H T DGE++ WG N+ QLG G ++P LS
Sbjct: 94 SLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNK 152
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LE 236
+ A G S+ +T G+V +WG SG++G G + ++ PR + L+
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQ 203
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
V A G + S + + G VY++G ++ + P ++ L + V
Sbjct: 204 NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVA 263
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG HT VLT G++Y WG+N G LG G
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFCCTDDVF 357
>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
Length = 681
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G + G+
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E +L RS P+ + + +++A G
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402
>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
Length = 477
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 155/330 (46%), Gaps = 37/330 (11%)
Query: 7 TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
A +K+++++D L G + + R F +G+ +G+LGLG + +P
Sbjct: 15 NAPSKFWIREDKVLHISCGDEHTSLLAGDGRVFT--FGDNAWGQLGLGHTKPVTKPTRIK 72
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
+ + + +ACG +HTL TE+G +Y+ G N+ QLG+ + P I GL+ V
Sbjct: 73 SLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAV 132
Query: 127 Q-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-----VIPIPTKVECLSGIFTK 180
+ +S G +HS +T G +Y+WG GQLG G+ K + + +V C+
Sbjct: 133 KMLSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDEVVCI------ 186
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G+ + VT GGK+L++G G+LG G ++ P+++ +EG V
Sbjct: 187 --ACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTG--------DNCLPKVVDGIEGHVV 236
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDK-----MLFQEGNHARRPSLI--SKLPYSEEV 293
+A G H+ I VY FG+ + + ML Q A P I K
Sbjct: 237 SVACGG-AHTVAI-TGWLVYTFGNGSSGQLGHGNMLLQ----ADTPHKIVWQKPTKVRSA 290
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG HT ++T G+L+T G +G L +G
Sbjct: 291 SCGENHTALVTDRGQLWTCGDGRHGKLALG 320
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P I L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 122/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGTHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P I L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNCSGQLG 269
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 14/235 (5%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L G+ P + L + + G E + +T GKV ++G SG+LG+
Sbjct: 213 LALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
G P+L++ ++G+ +I + A + G+V FG D
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGTH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY G N GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + +V ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 126/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG+ P I
Sbjct: 74 KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++ ++Q+S G H A+ DG+ + WG+NS+GQLGLGK+ P +V L GI
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q G S A++ G V WG +G+LG E +P +K L K
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303
Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIG 323
HT + S G +Y +G G LG G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTG 330
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L + GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 139/287 (48%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + ++ +K +A GG H L LT+ G V++ G + G
Sbjct: 3009 GEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3068
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 3069 KLG-HGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3127
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V+ LSG Q A G Q++++T G V +WG G G+LG G
Sbjct: 3128 ATQMKP--KLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGG----- 3180
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP L+ L G+ V G S + + G V+ +G ++ +H
Sbjct: 3181 ----SDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3236
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+L+ L + V G H +T G++Y WG N++G G G
Sbjct: 3237 RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3283
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 129/286 (45%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G D G
Sbjct: 3990 GYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4049
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4050 KLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4109
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4110 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4161
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I L G+ V G S + +G VY +G ++ +H R
Sbjct: 4162 ---SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4218
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP ++ L + + G H + GE++TWG N+ G LG G
Sbjct: 4219 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG 4264
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 117/243 (48%), Gaps = 15/243 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G H L LT+ GCVY+ G D G+LG +NI + L + L+K ++ I+ G +S+A++
Sbjct: 518 GKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALS 577
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
GELY WG+ + G+LG G + +PT V L G A G Q++ VT G
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDD--VTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGI 635
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V SWG G G+LG G S TP+++ +L + V G SA + G
Sbjct: 636 VFSWGDGDYGKLGRGG---------SDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARG 686
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G ++ H R P LI L +++ GG H LT +Y WG N
Sbjct: 687 EVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRN 746
Query: 316 ENG 318
+ G
Sbjct: 747 DYG 749
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 133/267 (49%), Gaps = 25/267 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + + + ++ +ACG H+ + G +Y GL ++G+
Sbjct: 3062 WGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3121
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGK 159
LG + ++P + L + VVQ++ G + ++T DG +Y WG G+LG G
Sbjct: 3122 LGHGDT-ATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGG 3180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+ V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3181 SDGCYTPL--LVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV-- 3236
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P L++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3237 -------RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3285
Query: 279 ---RRPSLISKLPYS--EEVVCGGYHT 300
R+PSL+ +L + V CG H+
Sbjct: 3286 IVNRKPSLVHELDDTRMNRVSCGSSHS 3312
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4043 WGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 4102
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4103 LGHGDS-DDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4160
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4161 -GSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 4217
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4218 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQ 4270
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4271 RPRLVHALQGKKITRVACGSAHT 4293
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 27/322 (8%)
Query: 13 YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
+L D ++ + +R + Q+ +WG D +LG G S+ + PV K
Sbjct: 2926 FLASDWEVLQEQVTAQRSTDAPPQQSAVYVWGLNDKDQLG-GLKGSKIKIPVRSEVLSK- 2983
Query: 72 SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQ- 127
LK + GG+ TLF+ ++ G +YA G G+LG+ ++ Y++ EP I L + V++
Sbjct: 2984 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD--YNMCEPKLIPFLSQYVIKK 3040
Query: 128 --ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ +G H+ A+T DG+++ WG+ +G+LG G + P +E L + A G
Sbjct: 3041 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN--CTTLDKPRLIESLKSKRIRDIACG 3098
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S A+ G++ +WG G GRLGHG + ++ P+L++ L G +V A
Sbjct: 3099 SGHSAAIASNGELYTWGLGEYGRLGHGD---------TATQMKPKLVQALSGQRVVQVAC 3149
Query: 246 GF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTC 301
G + + +G VY +GD K+ + P L+ +L +V CG +
Sbjct: 3150 GSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSL 3209
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LT GE++TWG + LG G
Sbjct: 3210 ALTKYGEVWTWGKGDYFRLGHG 3231
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 135/290 (46%), Gaps = 23/290 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C + LA GG TLF +T G VY+TG G
Sbjct: 3937 WGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKVYSTGYGAAG 3995
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE ++ +KK V +++G H A++ +G +Y WG+ +G+LG
Sbjct: 3996 RLGIGGTDSVMVPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4053
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L GI A G S A+T G + +WG G GRLGHG
Sbjct: 4054 GNRLS--YDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4107
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P++++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4108 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4162
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4163 DGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4212
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 15/248 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G S P + + ++ +ACG ++ L+ +G +Y G ++G+
Sbjct: 533 WGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGR 592
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG N ++ P ++ LK VV ++ G S +T G ++ WG G+LG G
Sbjct: 593 LGHGSNDDVTV-PTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG 651
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P V+ L I + G + S A+T G+V +WG G + RLGHG E +
Sbjct: 652 SDGS--KTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHV-- 707
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+LI+ L K+K + G H + E+ VY +G ++ G
Sbjct: 708 -------RYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVS 760
Query: 280 RPSLISKL 287
PSL L
Sbjct: 761 EPSLCPTL 768
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 123/249 (49%), Gaps = 21/249 (8%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITV 140
TL +G +Y G N GQLG E L P +S L+ +Q++ G A+T
Sbjct: 3925 TLSWDGSGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRP--IQLAGGEQTLFAVTA 3982
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG++Y G + G+LG+G + +PT +E + +F K+ A+ G + +A++ G V
Sbjct: 3983 DGKVYSTGYGAAGRLGIG--GTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4040
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG L + R P+L+++L G+++ A G HSA I G
Sbjct: 4041 YSWGEGDDGKLGHGNR---LSYDR------PKLVEDLLGIEIVDIACGGHHSAAITSAGW 4091
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGS 314
+Y +G ++ + + RP ++ L + +V CG T +T +++WG
Sbjct: 4092 LYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD 4151
Query: 315 NENGCLGIG 323
+ G LG G
Sbjct: 4152 GDYGKLGRG 4160
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 112/269 (41%), Gaps = 29/269 (10%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P C A + +K L C L L+ +G VY Q P R+
Sbjct: 456 PFYCDAIAELGIKHLCCTERALLILSLSGNVYIMYYGSETQY-----------PQRMHSF 504
Query: 122 KKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ V + + H A+T DG +Y WG G+LG G + P +E L
Sbjct: 505 SDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISH--DEPKLIETLLEKN 562
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G S A++ G++ +WG G GRLGHG + P L+ L+G
Sbjct: 563 IIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDV---------TVPTLVTTLKGH 613
Query: 239 KVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
V A +G + C+ +G V+ +GD K+ + ++ P ++ KL V
Sbjct: 614 MVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVF 673
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CGG + LT+ GE+YTWG + LG G
Sbjct: 674 CGGQFSAALTARGEVYTWGKGDAYRLGHG 702
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ +P + + +A G H L +T+TG VYA G ND GQ
Sbjct: 3220 WGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3279
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA-ITVDGE--------LYMWGKNSN 152
G I + +P + L + ++S G HS A I VD + ++
Sbjct: 3280 QGNGTTI-VNRKPSLVHELDDTRMNRVSCGSSHSIAWILVDQPTNGNQEPVTFQTARDPL 3338
Query: 153 GQ--LGLGKKAAK 163
GQ LGLG A +
Sbjct: 3339 GQMCLGLGNAAEQ 3351
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + ++ G V+ G ND GQ
Sbjct: 4201 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQ 4260
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4261 LGDGTTSALQ-RPRLVHALQGKKITRVACGSAHTLA 4295
>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2131
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 158/325 (48%), Gaps = 54/325 (16%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 1177 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1236
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQI-----------------------STGYHHSS 136
G+LG N P +I L+ +EVVQ+ S G+ HS+
Sbjct: 1237 GKLG-HGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSA 1295
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVT 193
+T DG+L+ +G G+LGLG + K +P +V L G Q A G ++ V+
Sbjct: 1296 VVTADGKLFTFGNGDYGRLGLGNTSNKK--LPERVAALEGYQIGQVANVACGLNHTLVVS 1353
Query: 194 GGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEY------TPRLIKELE-----GVKVK 241
G V ++G G G+LG G ++ +S+ + +P L +EL+ G+ +K
Sbjct: 1354 ADGMMVWAFGDGDYGKLGLGNSTA-----KSSPQVWAVILQSPTLCQELKVDVLCGISIK 1408
Query: 242 IAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
A G S + ++GRV+ FG DR + + NH RP + L + ++V G
Sbjct: 1409 KVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNH-NRPQQLPALSGVHVQDVAVGAE 1467
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
HT L+S G++Y WGSN G LG+G
Sbjct: 1468 HTLALSSTGDVYAWGSNSEGQLGLG 1492
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 53/306 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----------------------KHSLKALACG 79
WG+GDYG+LG G+ + + RP A + H ++CG
Sbjct: 1231 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCG 1290
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK----EVVQISTGYHHS 135
H+ +T G ++ G D+G+LG+ L P R++ L+ +V ++ G +H+
Sbjct: 1291 FKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL-PERVAALEGYQIGQVANVACGLNHT 1349
Query: 136 SAITVDGEL-YMWGKNSNGQLGLGKKAAKVIP--------IPT-----KVECLSGIFTKQ 181
++ DG + + +G G+LGLG AK P PT KV+ L GI K+
Sbjct: 1350 LVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKVDVLCGISIKK 1409
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G + SVA+T G+V ++G RL ES R+ + P+ + L GV V+
Sbjct: 1410 VACGTQFSVALTKDGRVFTFG---QDRLIGLPES------RARNHNRPQQLPALSGVHVQ 1460
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYH 299
A G H+ + G VY +G + ++ NH R P++++ L + +V G H
Sbjct: 1461 DVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHIHQVSAGRCH 1520
Query: 300 TCVLTS 305
+ T+
Sbjct: 1521 SAAWTA 1526
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
SGL ++++ +T + ++++WG +GQL +A + I +PT S
Sbjct: 1099 SGLDEQIMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNILVPTTAPSFSQ-- 1153
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 1154 AQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQGF 1204
Query: 239 KVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 1205 VVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQ 1263
Query: 295 -------------------------CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+T+ G+L+T+G+ + G LG+G
Sbjct: 1264 VGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLG 1317
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3701 WGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3760
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3761 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3818
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +PTK++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3819 -GSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3875
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3876 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3928
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 3929 RPRLVAALQGKKVNRVACGSAHT 3951
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 193 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKAISAFSGKQAGKHVVHIACGSTY 251
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 252 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 309
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 310 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 360
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 361 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 420
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 421 SWGSNDQ 427
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2709 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2768
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2769 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2826
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2827 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2883
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 2884 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2932
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2933 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2964
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 126/278 (45%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ +G VY N +L P + GL
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYN-----------SDTLAPQLVQGL 179
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 180 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKAISAFSG 235
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 236 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 283
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 284 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 343
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 344 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 381
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 2655 GEATNGRLGLG-LSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGD 2713
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2714 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 2772
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2773 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 2827
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 2828 ------SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2881
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 2882 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 2930
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 120/274 (43%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG
Sbjct: 3661 ESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD-R 3719
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3720 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3777
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 3778 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPTK 3828
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3829 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3888
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 3889 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3922
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P SAF KH + +ACG ++ +T G +Y G
Sbjct: 208 WGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 266
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 267 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 325
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 326 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 383
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 384 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 423
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3595 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3652
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3653 GRLGIGGTESVSSPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3710
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3711 HGSRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3765
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3766 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3819
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P+ I L +V CG + LT G +YTWG + LG G
Sbjct: 3820 SDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3870
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L +V+ + +G H
Sbjct: 2637 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRH 2696
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2697 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2754
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2755 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2805
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2806 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2865
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2866 TWGKGDYFRLGHG 2878
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2591 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2648
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G L S + PR I L VK A +G H+ +
Sbjct: 2649 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYMVKKVAVHSGGRHATAL 2700
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYT
Sbjct: 2701 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 2760
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 2761 WGLGEYGRLGHG 2772
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 264 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 323
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 324 GKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 382
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 383 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 425
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 95/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPI--------------------------------- 167
G +Y WG N GQLG G + AKV +P
Sbjct: 3590 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3648
Query: 168 -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3649 YGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3708
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3709 LGHGSRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3759
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3760 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3818
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 318 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 377
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 378 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 429
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 135/286 (47%), Gaps = 23/286 (8%)
Query: 49 GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
G+ G G+ E R PV + ++ A A G H L + G VY+ G ND GQLG+
Sbjct: 532 GQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGL 591
Query: 106 SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
I S P I L+++ + + YHHS+ ++ +GEL M+G N GQLGL +
Sbjct: 592 GSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQ 651
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P V+ LS + A G ++A+T GG+V S+G G+LG LG R+
Sbjct: 652 HTP--QLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLG-------LGHARN 702
Query: 224 TSEYTPRLIKELEGV---KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P L+K G K+ + G+ H+ I E G++ +G ++ +H
Sbjct: 703 MK--VPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNS 760
Query: 281 PSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ LP S ++ CG YHT +L S G + +G N G LG G
Sbjct: 761 AQYV-PLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAG 805
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 133/291 (45%), Gaps = 23/291 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +YG L LG S + F +++ +A G + + G V+ GLN GQ
Sbjct: 475 GQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKDGAVFTCGLNKSGQC 534
Query: 104 G---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G E + + +SG+ +V + G H A+ DG +Y WG N GQLGLG
Sbjct: 535 GNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGST 594
Query: 161 AAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
+K P ++ L + AA+ + S V+ G++L +G G+LG H Q
Sbjct: 595 ISKSH-TPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQH--- 650
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
++TP+L+ L + A G H+ I G VY FG ++ +
Sbjct: 651 --------QHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARN 702
Query: 278 ARRPSLI-SKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P+L+ + L S+E V CG YHT ++ G+L TWG N+ G LGIG
Sbjct: 703 MKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 753
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 118/238 (49%), Gaps = 16/238 (6%)
Query: 92 VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+++ G N++G+L + N LE + K + I+ G + + DG ++ G N
Sbjct: 471 LFSCGQNNYGELCLGHCNSTSKLEHVPFFS-AKAIRDIAGGNEVLAVVMKDGAVFTCGLN 529
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGGSGR 208
+GQ G G +VI I T V LSGI AA G E +AV G V SWG G+
Sbjct: 530 KSGQCGNGTFEERVI-IATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQ 588
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG G S+I + +TPR+I L E + AA + HSA + NG + +FG
Sbjct: 589 LGLG--STI------SKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDC 640
Query: 268 DKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ H P L+ L EV CG YHT +TSGGE+Y++G N+ G LG+G
Sbjct: 641 GQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLG 698
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 123/227 (54%), Gaps = 18/227 (7%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+LGLGS +S ++ S EK+ + A H+ ++ G + G+ND
Sbjct: 581 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDC 640
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ + P + L +V+ +++ G +H+ AIT GE+Y +GKN GQLGLG
Sbjct: 641 GQLGL-DHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGH 699
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
A+ + +PT V+ G ++ + G+ +V ++ GK+++WG G+LG G +
Sbjct: 700 --ARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDH 757
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+++++Y P + K+K A+ G H+ + NGRV +FG
Sbjct: 758 -----KNSAQYVPLPLSS----KIKTASCGCYHTLILMSNGRVMVFG 795
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G D G+LGL + + P + + + +ACG HT+ +T G VY+ G ND+G
Sbjct: 634 MFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYG 693
Query: 102 QLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ + L + L +++V +S GY+H+ I+ G+L WG+N GQLG+G
Sbjct: 694 QLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 753
Query: 159 ----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
K +A+ +P+P + K A+ G ++ + G+V+ +G G+LG G
Sbjct: 754 SKDHKNSAQYVPLPLSSK------IKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSR 807
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+ L S P L +V AAGF S
Sbjct: 808 T-----LPSADLPLPVPSNSLANDEVVRIAAGFYSS 838
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG HT + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 18/258 (6%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
S + +G + +G + ++ GN+A +P I L + CG HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Query: 304 TSGGELYTWGSNENGCLG 321
T G+++T+G N G LG
Sbjct: 252 TQDGKVFTFGDNSYGQLG 269
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
G HS + E+G+V+ +G + ++ F +R + +P ++ V GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L+ G + WGSN G L +
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALS 216
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG--SGRLGH-GQE 214
A K P VE + G+ + Q G + ++A + G+V+S+G G + R H G E
Sbjct: 272 PTAEKR--GPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SS + L S K+L V+VK AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 204 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 263
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 264 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 323
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L S+
Sbjct: 324 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 376
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ H+ R
Sbjct: 377 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 431
Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
P LI + + ++ CG YHT V T+G
Sbjct: 432 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 463
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 125/248 (50%), Gaps = 19/248 (7%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 182 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 239
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S+A
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 298
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG HS
Sbjct: 299 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 350
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
+ G + +G+ ++ GN A+ +P I L V CG HT VLT
Sbjct: 351 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 409
Query: 306 GGELYTWG 313
G+++T+G
Sbjct: 410 DGQVFTFG 417
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 22/218 (10%)
Query: 114 EPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+P R+ +GLK +++ ++G HS + + +Y G NS GQLG +K+ + P
Sbjct: 169 QPRRLEAGTGLK--LLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEP 224
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
++ LS + + G E SVAV G+V +WGAG G+LG G+ I + P
Sbjct: 225 IQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEI--------SFMPT 276
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLIS 285
I L G+K+ + G HS + E+G+V+ +G ++ L + + + SL
Sbjct: 277 KINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-E 335
Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+P ++ V GG H+ L+ G + WG+N +G L +
Sbjct: 336 GIPLAQ-VAAGGTHSFALSLMGTSFGWGNNRSGQLALS 372
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 255 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 314
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 315 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 374
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
A + I P + L + + G+E + +T G+V ++G S +L H S
Sbjct: 375 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 430
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG HT + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 129/258 (50%), Gaps = 18/258 (6%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
S + +G + +G + ++ GN+A +P I L + CG HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Query: 304 TSGGELYTWGSNENGCLG 321
T G+++T+G N G LG
Sbjct: 252 TQDGKVFTFGDNSYGQLG 269
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
G HS + E+G+V+ +G + ++ F +R + +P ++ V GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L+ G + WGSN G L +
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALS 216
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG--SGRLGH-GQE 214
A K P VE + G+ + Q G + ++A + G+V+S+G G + R H G E
Sbjct: 272 PTAEKR--GPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SS + L S K+L V+VK AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + G VY++G ++ + P I+ L
Sbjct: 199 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 131 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 190
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 191 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 248
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 249 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 305
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 306 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 358
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 359 RPRLVAALQGKKVNRVACGSAHT 381
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 91 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 149
Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 150 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 207
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 208 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 258
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 259 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 318
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 319 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 352
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 25 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 82
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 83 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 140
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 141 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 195
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 196 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 249
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 300
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 94/187 (50%), Gaps = 21/187 (11%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA--LGFEQSV-AVTGGGKV 198
G +Y WG N GQLG G + AKV +PT E L+ T + +G EQ++ AVT GK+
Sbjct: 20 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALA---TLRPVQLIGGEQTLFAVTADGKL 74
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDEN 256
+ G G GRLG G S+ TP L++ ++ V +K A +G H +
Sbjct: 75 YATGYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
G VY +G+ K+ + RP +I L E +V GG H+ +T+ G+LYTWG
Sbjct: 126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 185
Query: 315 NENGCLG 321
G LG
Sbjct: 186 GRYGRLG 192
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAA-LWGNGDYGRLGLGSL 56
LGR + K +K D G LG+ C S L + A WG GDY RLG GS
Sbjct: 245 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 302
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
+ RP + + A+A G H + TE G VY G ND GQLG P
Sbjct: 303 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 361
Query: 117 RISGLK-KEVVQISTGYHHSSA 137
++ L+ K+V +++ G H+ A
Sbjct: 362 LVAALQGKKVNRVACGSAHTLA 383
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG S +S RP A + ++CG H++ + G V+ G GQL
Sbjct: 204 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 263
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E+ S P +I+ L +++Q+S G++HS A++ DG+++ WG N GQLGLG
Sbjct: 264 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 323
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P KV+ L GI Q A G S A++ G WG SG+L S+
Sbjct: 324 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 376
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
Y P I L+ + V + G+ H++ + E+G+V+ FG + +++ H+ R
Sbjct: 377 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 431
Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
P LI + + ++ CG YHT V T+G
Sbjct: 432 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 463
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 125/248 (50%), Gaps = 19/248 (7%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
LKA A G H+L L VY+ G N GQLG ++ + P I L + +S G
Sbjct: 182 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 239
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ + ++ +PTK+ L+GI Q + G S+A
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 298
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG+ G+LG G S+ +P+ +K LEG+ + AAG HS
Sbjct: 299 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 350
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
+ G + +G+ ++ GN A+ +P I L V CG HT VLT
Sbjct: 351 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 409
Query: 306 GGELYTWG 313
G+++T+G
Sbjct: 410 DGQVFTFG 417
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 22/218 (10%)
Query: 114 EPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+P R+ +GLK +++ ++G HS + + +Y G NS GQLG +K+ + P
Sbjct: 169 QPRRLEAGTGLK--LLKAASGERHSLLLFSNHRVYSCGDNSRGQLG--QKSPQSTKRPEP 224
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
++ LS + + G E SVAV G+V +WGAG G+LG G+ I + P
Sbjct: 225 IQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEI--------SFMPT 276
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLIS 285
I L G+K+ + G HS + E+G+V+ +G ++ L + + + SL
Sbjct: 277 KINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-E 335
Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+P ++ V GG H+ L+ G + WG+N +G L +
Sbjct: 336 GIPLAQ-VAAGGTHSFALSLMGTSFGWGNNRSGQLALS 372
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G S E + P ++ + ++CG H+L L+E G V++ G N G
Sbjct: 255 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 314
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ N+ P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 315 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 374
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
A + I P + L + + G+E + +T G+V ++G S +L H S
Sbjct: 375 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 430
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 128/270 (47%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGEL+ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L GV V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K+VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 567
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 131/302 (43%), Gaps = 19/302 (6%)
Query: 19 KLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
+G + + ST F WG D G+LG GS P+ S ++ A+A
Sbjct: 36 AIGVSPALAQHKPGSTAVSEFLLAWGKNDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAA 95
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSA 137
G H+L LT G V A G N FGQLG I S P+ +S V ++ G HS A
Sbjct: 96 GRFHSLALTSAGTVLAWGTNHFGQLGDGTLIDRS-APVEVSLPPGTTVTAVAAGGVHSMA 154
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T G + WG N GQLG G + P+ + SG+ A S+AVT G
Sbjct: 155 LTSVGTVLAWGGNGVGQLGDGSTTRRTTPV--EAILPSGVTVTAVAAAESHSLAVTSAGA 212
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
L+WG G+G+LG G + + TP + G +V AAG LHS + G
Sbjct: 213 ALAWGLNGTGQLGDGS---------TINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVG 263
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPYSEE---VVCGGYHTCVLTSGGELYTWG 313
+G ++ +G R + +S LP E VV G H+ LT+ G WG
Sbjct: 264 AALAWGYNGTGQL--GDGTTINRSTPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWG 321
Query: 314 SN 315
N
Sbjct: 322 DN 323
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 124/287 (43%), Gaps = 20/287 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+L R PV S ++ A+A GG H++ LT G V A G N GQ
Sbjct: 112 WGTNHFGQLGDGTLIDRSAPVEVSLPPGTTVTAVAAGGVHSMALTSVGTVLAWGGNGVGQ 171
Query: 103 LGISENI--GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +E + SG+ V ++ HS A+T G WG N GQLG G
Sbjct: 172 LGDGSTTRRTTPVEAILPSGVT--VTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDGST 229
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V G A G S+AVT G L+WG G+G+LG G
Sbjct: 230 INRSTPV--SVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQLGDGT------- 280
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ + TP + G +V AG LHSA + G +GD ++ G+++
Sbjct: 281 --TINRSTPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGSNSSE 338
Query: 281 PSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S LP + HT + G WGSN G LG G
Sbjct: 339 AVEVS-LPTGTTLAAIASRDSDHTIAIAGDGTALAWGSNIFGQLGDG 384
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS +R PV + + A+A G H+L +T G A G N GQ
Sbjct: 216 WGLNGTGQLGDGSTINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQ 275
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
LG I S P+ ++ L EV + G HS+A+T G WG N GQLG
Sbjct: 276 LGDGTTINRS-TPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGS 334
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + +PT L+ I ++ + + ++A+ G G L+WG+ G+LG G
Sbjct: 335 NSSEAVEVSLPTG-TTLAAIASRDS----DHTIAIAGDGTALAWGSNIFGQLGDGT---- 385
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T+ TP + G+ + AAG H+
Sbjct: 386 -----TTNPSTPVPVALPTGITLLTTAAGSDHT 413
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 78/195 (40%), Gaps = 17/195 (8%)
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H + V L WGKN NGQLG G +PI V G A G S+A+
Sbjct: 46 HKPGSTAVSEFLLAWGKNDNGQLGNGSTTGSNVPI--AVSLPLGTTVTAVAAGRFHSLAL 103
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G VL+WG G+LG G P + G V AAG +HS
Sbjct: 104 TSAGTVLAWGTNHFGQLGDGTL---------IDRSAPVEVSLPPGTTVTAVAAGGVHSMA 154
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----EEVVCGGYHTCVLTSGGE 308
+ G V +G V ++ +G+ RR + + + S V H+ +TS G
Sbjct: 155 LTSVGTVLAWGGNGVGQL--GDGSTTRRTTPVEAILPSGVTVTAVAAAESHSLAVTSAGA 212
Query: 309 LYTWGSNENGCLGIG 323
WG N G LG G
Sbjct: 213 ALAWGLNGTGQLGDG 227
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 141/286 (49%), Gaps = 17/286 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ YG LGLG +E P + +++ +ACG HT+ +T+ G V++ G ND
Sbjct: 31 WGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGNNDS 90
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL + Q + G HS A+ G+L+ WG N++GQLGLG
Sbjct: 91 GQLG-HEKPTKRLQ--MIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGT 147
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P V+ L Q A G + ++A+T G++ +WG+ G+LG GQ+ I
Sbjct: 148 PLT-IAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKI-- 204
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E P+LI L + + A G HS + ++G V+ +G ++ + +
Sbjct: 205 ------ETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKY 258
Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L+ L + + V CG + LT G ++T G+ G LG G
Sbjct: 259 VPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHG 304
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 129/276 (46%), Gaps = 22/276 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN D G+LG R + + + K ACG +H++ + G ++ G N GQL
Sbjct: 86 GNNDSGQLGHEKPTKRLQMI--PGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQL 143
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + + P + L VVQI+ G H+ A+T +GELY WG NS+GQLGLG+
Sbjct: 144 GLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQD-- 201
Query: 163 KVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ I T+ + ++G+ T A G S+ V+ G V WG G+LG S
Sbjct: 202 --VKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDIS---- 255
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+Y P L+K L KVK A G S + +G V+ G ++ ++
Sbjct: 256 -----DKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEI 310
Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTW 312
P I +L S ++ CG HT L S G++Y W
Sbjct: 311 LPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
S K+ ++ T + I D +Y WG G+LGLG + I +P +++
Sbjct: 3 SAPKRLCIKADTFHLPLKLIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATA 62
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+Q A G +V +T G+V S G SG+LGH + + L ++I L+
Sbjct: 63 VEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRL-----------QMIPGLDAF 111
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVC 295
K AA G HS ++ G+++ +G A ++ L A P ++ L S ++ C
Sbjct: 112 IFKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIAC 171
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT LT+ GELY WGSN +G LG+G
Sbjct: 172 GKKHTLALTNNGELYAWGSNSDGQLGLG 199
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGLG ++ RP + + + +ACGG H++ ++++G V+ G N FG
Sbjct: 188 WGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFG 247
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+++ I P + L+ V+ ++ G S +T+DG ++ G GQLG G
Sbjct: 248 QLGMND-ISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGAN 306
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG 205
+ +++P ++ L G Q + G ++A V GKV +WG GG
Sbjct: 307 SNEILP--RQIIELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGG 350
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H
Sbjct: 30 AGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDCLSGKKIACLSYGSGPHVV 88
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE++ WG N+ QLG G ++P LS + A G S+ +T G
Sbjct: 89 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDG 147
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + KV + A G + S + +
Sbjct: 148 EVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVD 198
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
G VY++G ++ + P +S L + V CG HT VLT G++Y WG
Sbjct: 199 TGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWG 258
Query: 314 SNENGCLGIG 323
+N G LG G
Sbjct: 259 ANSYGQLGTG 268
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P SA + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 137/275 (49%), Gaps = 25/275 (9%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 111
Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
N G L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 112 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 168
Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 -PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 218
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 276
Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 277 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 16/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N+ QLG G A ++P LS + A G S+ +T G+V +W
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 152
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
G SG++G G + ++ PR + KV + A G + S + G V+
Sbjct: 153 GYNNSGQVGSGS---------TANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVF 203
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
++G ++ + P ++ L + V CG HT VLT G++Y WG+N G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 CLGIG 323
LG G
Sbjct: 264 QLGTG 268
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + +ACG ++ + TG V+ G N G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 211
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G P R++ L+ VQ ++ GY H+ +T +G++Y WG NS GQLG G K
Sbjct: 212 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
+ + P P VE I A S A T GG V WG G S L H
Sbjct: 271 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 322
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 312
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 137/275 (49%), Gaps = 25/275 (9%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 111
Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
N G L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 112 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 168
Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 -PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 218
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 276
Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 277 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 16/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T +
Sbjct: 35 LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTE 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N+ QLG G A ++P LS + A G S+ +T G+V +W
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 152
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
G SG++G G + ++ PR + KV + A G + S + G V+
Sbjct: 153 GYNNSGQVGSGS---------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVF 203
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
++G ++ + P ++ L + V CG HT VLT G++Y WG+N G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 319 CLGIG 323
LG G
Sbjct: 264 QLGTG 268
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + +ACG ++ + TG V+ G N G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 211
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G P R++ L+ VQ ++ GY H+ +T +G++Y WG NS GQLG G K
Sbjct: 212 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
+ + P P VE I A S A T GG V WG G S L H
Sbjct: 271 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 322
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 312
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V IS G H +++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G ++++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 144/296 (48%), Gaps = 17/296 (5%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA-FEKHS-LKALACGGAHTLFLTETG 90
S L++ WGN +G LGLG +E V C F+K S ++ +ACG +T+ +T G
Sbjct: 42 SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDG 101
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGK 149
+Y+ G ND+GQLG + G L I GL V + + G +H+ A+ G+L+ WG
Sbjct: 102 KIYSCGNNDYGQLGHEQ--GRKRLQL-ILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGS 158
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
NS GQLGL K P V+ L Q A G + ++A+T G++ SWG+ G+L
Sbjct: 159 NSEGQLGLNSKNFMECS-PRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQL 217
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + E P+LI L GV + A G HS I ++G ++ +G +
Sbjct: 218 GLGVDIR--------CEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQ 269
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + P + L ++ CG + LT G ++T G+ G LG G
Sbjct: 270 LGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHG 325
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 128/282 (45%), Gaps = 16/282 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG + R R + + K ACG HT+ + E G +++ G N GQL
Sbjct: 107 GNNDYGQLG--HEQGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQL 164
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P + L +VQI+ G H+ A+T +GELY WG NS GQLGLG
Sbjct: 165 GLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR 224
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P + L+G+ A G S+A++ G + WG G+LG
Sbjct: 225 CEMK-PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND--------- 274
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + P ++ L KV AA G S + +G V+ G ++ N+ P
Sbjct: 275 TQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPR 334
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
+ +L S ++ CG HT L S G +Y WG G LG
Sbjct: 335 QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 376
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 21/197 (10%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGLG + +P + + + +ACGG H++ ++++G ++ G N FG
Sbjct: 209 WGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFG 268
Query: 102 QLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+++ N+ Y L+ LR +V + G S +TVDG ++ G GQLG
Sbjct: 269 QLGLNDTQNRNLPYQLQTLR----NAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGH 324
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
G +++P +V L G Q + G ++A V G+V +WG GG+G+LG+
Sbjct: 325 GSNNNEILP--RQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNST-- 380
Query: 217 ILGFLRSTSEYTPRLIK 233
RST+ TP++++
Sbjct: 381 -----RSTT--TPQVVR 390
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 278 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + G VY++G ++ + P I+ L
Sbjct: 175 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 --SVVLPHLTHFSCTDDVF 333
>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Saimiri boliviensis boliviensis]
Length = 988
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 15/272 (5%)
Query: 46 GDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G GR G RW P A + ++CG H+L + G V+A G GQLG
Sbjct: 53 GQLGRRG----APRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 105 ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ E + P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 109 VGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPS 168
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 169 Q-PSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNVQ 221
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P L
Sbjct: 222 VQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQL 281
Query: 284 ISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
+ ++ ++ CGG HT + + G++ ++G
Sbjct: 282 VERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 126/255 (49%), Gaps = 24/255 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLR-ISGLKKEVVQISTGYHH 134
A G H L L V++ G N GQLG + L EP++ + LK ++V S G H
Sbjct: 29 ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLV--SCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGVGE-LKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQPSPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSG 306
G + +G + ++ N + +P I L Y + CG HT VL+
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLSQD 254
Query: 307 GELYTWGSNENGCLG 321
G+++T+G N +G LG
Sbjct: 255 GKVFTFGDNSSGQLG 269
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L + +V P + L + + G E + ++ GKV ++G SG+LG+
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
G P+L++ ++G+ +I G A + G+V FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG---------- 313
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
R PS SK P E + + L S +L
Sbjct: 314 -----RGPSATSK-PTHPEALKENFDIRCLISADDL 343
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G H+ + + ++ G+NS GQLG ++ A +P V+ L + +
Sbjct: 24 ELLQAASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TPR I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEI--------NFTPRKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 388
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 16/279 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + F S+ +LACGGAH + LT G + G + GQ
Sbjct: 23 WGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQ 82
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E + +L P ++ L + +S G+ HS ++ G ++ G S GQLG G A
Sbjct: 83 LGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNA 142
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ KV C + Q A G S+ + G +V +G+G G+LG +
Sbjct: 143 SHCSPV--KVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSND------- 193
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R S P+++ EGV++ AA HSA + +G VY +G F+ A P
Sbjct: 194 RVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRG------FKGFEDAHVP 247
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ +V G H ++ GE+Y G N G L
Sbjct: 248 QCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVL 286
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 16/229 (6%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
F G+G +G+LG G S PV S F + +ACG H+L L + VY G
Sbjct: 124 FVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSG 183
Query: 99 DFGQLGISENIGYSLE-PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQLG+S + S+ P +SG + E+V + HS+A++VDG +Y WG+
Sbjct: 184 KRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGR------- 236
Query: 157 LGKKAAKVIPIPTKVECLSGI--FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G K + +P +CL+ FTK ALG+ ++A++G G+V G G L Q
Sbjct: 237 -GFKGFEDAHVP---QCLNSSLNFTK-VALGWNHALAMSGEGEVYMLGGNHLGVLSDLQN 291
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E+ + L+G K+ AAG HS + E+G + +G
Sbjct: 292 IGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWG 340
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG + GQLG + P LS I A G +A+T GK LSWG
Sbjct: 20 VWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSI--SSLACGGAHVIALTSAGKALSWGR 77
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G SG+LGHG+ + S + Y P+ + L+G + +AG+ HS + + G V+ G
Sbjct: 78 GNSGQLGHGE-------VVSNTLY-PKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCG 129
Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
D + ++ + P +S + +V CG H+ VL G ++Y +GS + G LG
Sbjct: 130 DGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLG 189
Query: 322 I 322
+
Sbjct: 190 V 190
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS--LEPLRISGLKK------ 123
+ +A G H L ++ G VY G N G L +NIG + LR L+K
Sbjct: 255 NFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDG 314
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
++ I+ G HS +T GE+ WG +GQLGLG + P+ ++
Sbjct: 315 TKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLD 364
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 130/286 (45%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K A++ GG H + L+ G VY+ G D G
Sbjct: 4052 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDG 4111
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E+V I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4112 KLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4171
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4172 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I L G+ V G S + +G VY +G ++ +H R
Sbjct: 4224 ---SDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4280
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP ++ L + + G H + GE++TWG N+ G LG G
Sbjct: 4281 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG 4326
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 133/287 (46%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + +K +A GG H L LT+ G V++ G + G
Sbjct: 3070 GEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3129
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG I +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 3130 KLGHGNCISLD-KPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3188
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3189 ITQTRP--KLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGG----- 3241
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP L+ L + V G S + + G V+ +G ++ +H
Sbjct: 3242 ----SDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3297
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+L+ L + V G H +T G++Y WG N++G G G
Sbjct: 3298 RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3344
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + ++ +ACG H+ + G +Y GL ++G+
Sbjct: 3123 WGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3182
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG + I + L + + VVQ++ G + A+T DG +Y WG G+LG G
Sbjct: 3183 LGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGS 3242
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ V+ L+ + Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3243 DGCYTPL--LVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3297
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3298 ------RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTS 3347
Query: 279 --RRPSLISKLPYS--EEVVCGGYHT 300
R+PSL+ L + V CG H+
Sbjct: 3348 VNRKPSLVHDLEDARVNRVSCGSSHS 3373
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 142/315 (45%), Gaps = 26/315 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
T +Y +LG K C +R L NG+ + GS E+++ P F
Sbjct: 514 TPFYCDAIAELGIKQLCCT-------ERALMILSLNGNVYNMYHGS-ETQY-PQRVHGFS 564
Query: 70 KHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
+ +A G H L LT+ GCVY+ G D G+LG + I Y L + L+K ++
Sbjct: 565 DKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIF 624
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
I+ G +S+A++ +GELY WG+ + G+LG G + PT V L G A G
Sbjct: 625 IACGSTYSAALSANGELYTWGRGNYGRLGHGN--FDDVMTPTLVTTLKGHTVVHVACGSG 682
Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
Q++ VT G V SWG G G+LG G + TP+++ +L + V
Sbjct: 683 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 733
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
G SA + +G VY +G ++ H R P +I L +++ G H L
Sbjct: 734 GSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILAL 793
Query: 304 TSGGELYTWGSNENG 318
T +Y WG N+ G
Sbjct: 794 TEDQFVYGWGRNDYG 808
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4105 WGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 4164
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4165 LGHGDS-DDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4222
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4223 -GSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 4279
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ +
Sbjct: 4280 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALH 4332
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4333 RPRLVHALQGKKITRVACGSAHT 4355
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 135/290 (46%), Gaps = 23/290 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C + LA GG TLF +T G +Y+TG G
Sbjct: 3999 WGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKIYSTGYGAAG 4057
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S I LE ++ +KK V +S+G H A++ +G +Y WG+ +G+LG
Sbjct: 4058 RLGIGGTDSVMIPTLLESIQHVFIKK--VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH 4115
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G K + P +E L G+ A G S A+T G + +WG G GRLGHG
Sbjct: 4116 GNKVS--YDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4169
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P++++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4170 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4224
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4225 DGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4274
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 154/321 (47%), Gaps = 25/321 (7%)
Query: 13 YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
+L D ++ K +R + + Q+ +WG D +LG G S+ + PV K
Sbjct: 2987 FLASDWEVLQKQIAIQRSVDTPPQQSAVYVWGLNDKDQLG-GLKGSKIKLPVYSETLSK- 3044
Query: 72 SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
LK + GG+ TLF+ ++ G +YA G G+LG+ ++ EP I L + V++
Sbjct: 3045 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNMCEPKAIPFLSQFVIKKV 3102
Query: 128 -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ +G H+ A+T DG+++ WG+ +G+LG G + + P +E L + A G
Sbjct: 3103 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCIS--LDKPKLIEVLKSKRIRDIACGS 3160
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S A+ G++ +WG G GRLGHG + ++ P+L++ L G +V A G
Sbjct: 3161 GHSAAIASNGELYTWGLGEYGRLGHGD---------TITQTRPKLVQALIGHRVVQVACG 3211
Query: 247 F--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCV 302
+ + +G VY +GD K+ + P L+ +L +V CG +
Sbjct: 3212 SRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLA 3271
Query: 303 LTSGGELYTWGSNENGCLGIG 323
LT GE++TWG + LG G
Sbjct: 3272 LTKYGEVWTWGKGDYFRLGHG 3292
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 21/249 (8%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITV 140
TL +G +Y G N GQLG E L P +S L+ +Q++ G A+T
Sbjct: 3987 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRP--IQLAGGEQTLFAVTA 4044
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG++Y G + G+LG+G + IPT +E + +F K+ A+ G + +A++ G V
Sbjct: 4045 DGKIYSTGYGAAGRLGIG--GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHV 4102
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG + S P+LI++L GV++ A G HSA I G
Sbjct: 4103 YSWGEGDDGKLGHGNK---------VSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGW 4153
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGS 314
+Y +G ++ + + RP ++ L + +V CG T +T +++WG
Sbjct: 4154 LYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD 4213
Query: 315 NENGCLGIG 323
+ G LG G
Sbjct: 4214 GDYGKLGRG 4222
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ + P + + + H++ +ACG + TL +T +G V++ G D+
Sbjct: 644 WGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 703
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G + L VV++ G S+A+T GE+Y WGK +LG G +
Sbjct: 704 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSE 763
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +E L K ++G +A+T V W GR +GQ LG
Sbjct: 764 --EHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGW-----GRNDYGQIDPTLGP 816
Query: 221 LRSTSEYTPRL 231
+ S P L
Sbjct: 817 IISEPTLCPTL 827
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 117/272 (43%), Gaps = 35/272 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
P C A + +K L C + L+ G VY N+ + E P R+
Sbjct: 515 PFYCDAIAELGIKQLCCTERALMILSLNGNVY--------------NMYHGSETQYPQRV 560
Query: 119 SGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
G + + + + H A+T DG +Y WG G+LG G + P +E L
Sbjct: 561 HGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTIS--YDEPKLIEALL 618
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
A G S A++ G++ +WG G GRLGHG ++ TP L+ L
Sbjct: 619 EKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVM---------TPTLVTTL 669
Query: 236 EGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
+G V A +G + C+ +G V+ +GD K+ + ++ P ++ KL
Sbjct: 670 KGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV 729
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG + LT+ GE+YTWG + LG G
Sbjct: 730 KVFCGSQFSAALTAHGEVYTWGKGDAYRLGHG 761
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + A + + +ACG AHTL
Sbjct: 4315 WGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTL 4356
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 137/275 (49%), Gaps = 25/275 (9%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 69 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 128
Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
N G L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 129 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 185
Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 186 -PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 235
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 236 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 293
Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 294 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 328
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 16/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T +
Sbjct: 52 LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 110
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N+ QLG G A ++P LS + A G S+ +T G+V +W
Sbjct: 111 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 169
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
G SG++G G + ++ PR + KV + A G + S + G V+
Sbjct: 170 GYNNSGQVGSGS---------TANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVF 220
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
++G ++ + P ++ L + V CG HT VLT G++Y WG+N G
Sbjct: 221 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 280
Query: 319 CLGIG 323
LG G
Sbjct: 281 QLGTG 285
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + +ACG ++ + TG V+ G N G
Sbjct: 169 WGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 228
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G P R++ L+ VQ ++ GY H+ +T +G++Y WG NS GQLG G K
Sbjct: 229 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 287
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
+ + P P VE I A S A T GG V WG G S L H
Sbjct: 288 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 339
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 221 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 280
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 281 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 329
>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
Length = 396
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 140/292 (47%), Gaps = 20/292 (6%)
Query: 44 GNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
G+G GRLGL +R P+ + +K+LACGG H L L+ G VY+ G ND
Sbjct: 10 GHGAGGRLGLNDERARTAFTGPL--GTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYNDS 67
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q G EP I L+ +VVQI+ G HS A+T E++ WG+ +GQLG G
Sbjct: 68 RQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGD 127
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P V+ L G K G+E + A+TG GKVL +G+ SG+LG+G +G
Sbjct: 128 VSD--VWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIG 185
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--LFQEGNH 277
+ Y P +K L + A G S + G++Y G A ++ F+E
Sbjct: 186 ----GNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVES 241
Query: 278 ARRP------SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + K + + V CG H+ L+ G +Y+WGS N LG G
Sbjct: 242 LNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHG 293
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 18/255 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G + W P + + +K++ CG +T +T TG V G G+
Sbjct: 115 WGRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGK 174
Query: 103 LG---ISENIGYSLE-PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG + IG ++ P+++ L K ++Q + G + S ++ G+LY G +NGQLG+
Sbjct: 175 LGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGI 234
Query: 158 GKKAAKVIPIP----TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ + + +P + G+F K + G S+A++ G V SWG+G + LGHG
Sbjct: 235 PFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGG 294
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ +TP+++ LE +AG HSA + GR+Y +G V ++
Sbjct: 295 ---------TEDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTG 345
Query: 274 EGNHARRPSLISKLP 288
+ + +LP
Sbjct: 346 QNIDDHSADHVQRLP 360
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
VY+ G G+LG+++ + + L+ EV ++ G H+ ++ G++Y WG N
Sbjct: 6 VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYN 65
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ Q G G + P + L + Q A G + SVA+T +V +WG G G+LG
Sbjct: 66 DSRQTGHGVEDLSDWE-PRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLG 124
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG S + + P L+K L+G +K G+ ++ I G+V FG A K+
Sbjct: 125 HGDVSDV---------WFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKL 175
Query: 271 LFQE------GNHARRPSLISKLPYSEEVVCGGYH-TCVLTSGGELYTWGSNENGCLGI 322
+ GN L S ++ GG + + L+ G+LY+ G NG LGI
Sbjct: 176 GNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGI 234
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 11/120 (9%)
Query: 73 LKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQIS 129
+K ++CG +H+L L+E G VY+ +G+N G +E+ + P ++ L+ + V +S
Sbjct: 260 VKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTED---TFTPKMVAMLEADPCVSVS 316
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKK-----AAKVIPIPTKVECLSGIFTKQAAL 184
G +HS+A++ G +Y WG+N GQLG G+ A V +PT+V + + + A+
Sbjct: 317 AGGYHSAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRVILKGSVDSSEMAM 376
>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1166
Score = 116 bits (290), Expect = 2e-23, Method: Composition-based stats.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 22/281 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLND 99
+WG+ YG+LGL S E + F S ++ +ACG HT F+ + G VY+ G N+
Sbjct: 38 VWGSDTYGQLGLASREFG-KSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYVYSMGNNN 96
Query: 100 FGQLGIS-ENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG+S + Y P + GLK + VQIS G +H++ + +G+L+ WG+N GQLG+
Sbjct: 97 QGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTWGQNCEGQLGI 156
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
GK P ++ +F + G ++ +T K+ +G G G+LG G E
Sbjct: 157 GKSDNMTTPQIVDLKNNLAVFV---SCGKRNTMVITQTQKIFGFGDGKCGQLGLGNE--- 210
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQ 273
+EY PR + +++ + + G H+ ++E G + G+ +++ Q
Sbjct: 211 ------CNEYKPRQL-QIQMQNIVAISCGDRHTLFLNEEGEAFSCGNNTYNQLGCANNSQ 263
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
N + S L + + + + L+S G LY WG+
Sbjct: 264 SSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGT 304
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 12/232 (5%)
Query: 92 VYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
VY G + +GQLG+ S G S R + + I+ G H+S I +G +Y G N
Sbjct: 36 VYVWGSDTYGQLGLASREFGKSCPSPRFTSFSVVIEDIACGEEHTSFIAQNGYVYSMGNN 95
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+ GQLG+ + PT VE L G Q + G + V G++ +WG G+LG
Sbjct: 96 NQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTWGQNCEGQLG 155
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G +S + TP+++ +L+ + G ++ I + +++ FGD ++
Sbjct: 156 IG---------KSDNMTTPQIV-DLKNNLAVFVSCGKRNTMVITQTQKIFGFGDGKCGQL 205
Query: 271 -LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
L E N + L ++ + CG HT L GE ++ G+N LG
Sbjct: 206 GLGNECNEYKPRQLQIQMQNIVAISCGDRHTLFLNEEGEAFSCGNNTYNQLG 257
Score = 74.7 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 14 LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
LK ++ + G + + Q+ F +G+G G+LGLG+ + ++P + ++
Sbjct: 170 LKNNLAVFVSCGKRNTMVITQTQKIFG--FGDGKCGQLGLGNECNEYKPRQLQ-IQMQNI 226
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI--SGLKKEVVQISTG 131
A++CG HTLFL E G ++ G N + QLG + N S P+++ K V I+
Sbjct: 227 VAISCGDRHTLFLNEEGEAFSCGNNTYNQLGCANNSQSSNIPVKVKQKSTLKFVKVIAAN 286
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL----GFE 187
S+A++ +G LY+WG GQ PT+ E F + L G +
Sbjct: 287 TPMSAALSSEGYLYLWGTGFFGQFDR----------PTRCE-----FAPKDLLDICIGNQ 331
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHG 212
+ G GKV SWG+ G LG G
Sbjct: 332 FICLLDGEGKVYSWGSNMFGELGQG 356
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V WG+ G+LG F +S +PR V ++ A G H++ I +NG
Sbjct: 36 VYVWGSDTYGQLGLASRE----FGKSCP--SPRFTSF--SVVIEDIACGEEHTSFIAQNG 87
Query: 258 RVYIFGDRAVDKM--LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
VY G+ ++ E + P+L+ L + ++ CG YHT + G+L+TWG
Sbjct: 88 YVYSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTWG 147
Query: 314 SNENGCLGIG 323
N G LGIG
Sbjct: 148 QNCEGQLGIG 157
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 17/296 (5%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
ST+ + WG+ +G LGLG +E P + ++ +ACG +T+ +T G
Sbjct: 71 STVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDG 130
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGK 149
VY+ G ND+GQLG E L+ I GL V +++ G HH+ A+ G+L+ WG
Sbjct: 131 QVYSCGNNDYGQLG-HEKGRKRLQ--LIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGS 187
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N+ GQLGL K + +P V L Q A G +A+T GK+ SWG+ G+L
Sbjct: 188 NAEGQLGLNSKNL-IECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQL 246
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + +E P+LI L GV + G HS I ++G V+ +G +
Sbjct: 247 GLGTDVK--------NEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQ 298
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + P + L ++ CG + LT G ++T G+ G LG G
Sbjct: 299 LGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHG 354
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 16/282 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG + R R + + K +ACG HTL + E G +++ G N GQL
Sbjct: 136 GNNDYGQLG--HEKGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQL 193
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P + L VVQ++ G +H A+T +G+LY WG NS+GQLGLG
Sbjct: 194 GLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVK 253
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
I P + L+G+ G S+A++ G V WG G+LG
Sbjct: 254 NEIK-PKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLND--------- 303
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + PR ++ L+ KV AA G S + +G V+ G ++ ++ P
Sbjct: 304 TRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEILPR 363
Query: 283 LISKLPYS--EEVVCGGYHTC-VLTSGGELYTWGSNENGCLG 321
+ +L S ++ CG HT ++ S G +Y WG G LG
Sbjct: 364 QVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLG 405
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 99/178 (55%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGLG+ +++ +P + S+ + + CGG H++ ++++G V+ G N FG
Sbjct: 238 WGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFG 297
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+++ +L P ++ L+ +V + G S +TVDG ++ G GQLG G
Sbjct: 298 QLGLNDTRNRNL-PRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNT 356
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+ +++P +V L G Q + G ++ V G+V +WG GG+G+LG+ S+
Sbjct: 357 SNEILP--RQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSV 412
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ + P ++ L
Sbjct: 175 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 235 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 268
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHHTHFCCTDDVF 333
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 136/284 (47%), Gaps = 25/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G LG G+ R RPV + + +A+A G H+L + G V+A G N GQ
Sbjct: 106 WGHNGSGELGDGTTFRRTRPVQVTGLSE--AEAVAAGDGHSLVVRSDGTVWAWGWNSDGQ 163
Query: 103 LGISENIGYSLE---PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG G + E P++++GL V+++ G HS A+ +DG ++ WG+N +GQLG G
Sbjct: 164 LG----DGTTRERHVPVQVAGLSGG-VKVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGT 218
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ +V LSG+ A G S+AV G V +WG G+LG G S+ L
Sbjct: 219 TVQRSAPV--QVAGLSGVVA--VAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSARL- 273
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TP + L G V + AAG HS + +G V+ +G ++ +
Sbjct: 274 --------TPVQVTGLSG-GVAV-AAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASL 323
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L E V G H+ V S G ++ WG+N G G G
Sbjct: 324 TPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDG 367
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 133/281 (47%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV + A+A G H+L L G V+A G N GQ
Sbjct: 406 WGQNLFGQLGDGTRMQRTAPVQVTGLSGG--VAVAAGDDHSLGLCLDGTVWAWGQNTSGQ 463
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P++++ L VV ++ G HS A++ DG ++ WG N++GQLG G A
Sbjct: 464 LG-DGTTAQRPAPVQVTELSG-VVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRA 521
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V LSG+ A G+ S+AV G V +WG +LG G
Sbjct: 522 RLTPV--QVAGLSGVVA--VAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTN-------- 569
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T TP + L G AAAG+ HS + +G V+ +G+ A ++ N + P
Sbjct: 570 -TQRPTPVRVPGLSGGVA--AAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPV 626
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L V G + + + S G + WG N G LG G
Sbjct: 627 QVTGLSGGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGDG 667
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 136/283 (48%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + E + A+A G +H+L ++ G V+A G N GQ
Sbjct: 456 WGQNTSGQLGDGTTAQRPAPVQVT--ELSGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQ 513
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P++++GL VV ++ GY HS A+ DG ++ WG NS QLG G
Sbjct: 514 LGDGTTRAR-LTPVQVAGLSG-VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQ 571
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P +V LSG AA G+ S+ + G V WG G+LG+G
Sbjct: 572 R--PTPVRVPGLSGGVA--AAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGT--------- 618
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+ + ++P + L G V +AA F S + +G V +GD ++ +G R
Sbjct: 619 ANASFSPVQVTGLSG-GVAVAAGDF-QSLAVRSDGTVRAWGDNIYGQL--GDGTVTTRLA 674
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ L V G + + SGG L+ WG N +G LG G
Sbjct: 675 PVGVNGLSGGMAVAAGNGFSLAVHSGGMLHAWGYNTDGQLGHG 717
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 134/282 (47%), Gaps = 21/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + +K +A G H+L + G V+A G ND GQ
Sbjct: 156 WGWNSDGQLGDGTTRERHVPVQVAGLSG-GVK-VAAGDGHSLAVCLDGTVWAWGRNDSGQ 213
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P++++GL VV ++ G HS A+ DG ++ WG+NS+GQLG G +A
Sbjct: 214 LGDGTTVQRS-APVQVAGLSG-VVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSA 271
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V LSG A G S+AV G V +WG G+LG G
Sbjct: 272 RLTPV--QVTGLSGGVA--VAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSM-------- 319
Query: 223 STSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ TP + I EG V AAG HS +G V+ +G+ + + P
Sbjct: 320 -TASLTPVQAIGLSEGEAV---AAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAP 375
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L V G H + S G ++ WG N G LG G
Sbjct: 376 VQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDG 417
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 127/281 (45%), Gaps = 21/281 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG G+ R P L +A G +H+L + G +A G N G+L
Sbjct: 57 GSNTSGQLGDGTTSERRVPAQVVGLSDAVL--VAAGSSHSLAIRSDGTAWAWGHNGSGEL 114
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G P++++GL E ++ G HS + DG ++ WG NS+GQLG G +
Sbjct: 115 GDGTTF-RRTRPVQVTGL-SEAEAVAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRER 172
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+P+ +V LSG + A G S+AV G V +WG SG+LG G +
Sbjct: 173 HVPV--QVAGLSGGV--KVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGT---------T 219
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RPS 282
P + L GV AAG HS + +G V+ +G R D L AR P
Sbjct: 220 VQRSAPVQVAGLSGVVA--VAAGSSHSLAVRSDGTVWAWG-RNSDGQLGDGTTSARLTPV 276
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L V G +H+ + S G ++ WG N G LG G
Sbjct: 277 QVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDG 317
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 141/333 (42%), Gaps = 73/333 (21%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS+ + PV + +A+A G H+L G V+A G N GQ
Sbjct: 306 WGQNTRGQLGDGSMTASLTPVQAIGLSEG--EAVAAGETHSLVARSDGTVWAWGNNIEGQ 363
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + S P++++ L ++ G H+ A+ DG ++ WG+N GQLG G +
Sbjct: 364 RG-DGSAKTSTAPVQVTALSGGFT-VAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQ 421
Query: 163 KVIPI------------------------------------------------PTKVECL 174
+ P+ P +V L
Sbjct: 422 RTAPVQVTGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPAPVQVTEL 481
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
SG+ A G S+AV+ G V +WG+ SG+LG G + L TP +
Sbjct: 482 SGVVA--VAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARL---------TPVQVAG 530
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ--EGNHARRPSLISKLPYSEE 292
L GV AAG+ HS + +G V+ +G+ + FQ +G + +RP+ + S
Sbjct: 531 LSGVVA--VAAGYFHSLAVRSDGTVWAWGNNS----FFQLGDGTNTQRPTPVRVPGLSGG 584
Query: 293 V--VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V G +H+ VL S G ++ WG+N G LG G
Sbjct: 585 VAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNG 617
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 116/250 (46%), Gaps = 21/250 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
LA GG+H+L + G V+A G N GQLG + P ++ GL V+ ++ G HS
Sbjct: 37 LAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRV-PAQVVGLSDAVL-VAAGSSHS 94
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
AI DG + WG N +G+LG G + P+ +V LS + A G S+ V
Sbjct: 95 LAIRSDGTAWAWGHNGSGELGDGTTFRRTRPV--QVTGLS--EAEAVAAGDGHSLVVRSD 150
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G + + P + L G VK+ AAG HS +
Sbjct: 151 GTVWAWGWNSDGQLGDGT---------TRERHVPVQVAGLSG-GVKV-AAGDGHSLAVCL 199
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+G V+ +G D +G +R P ++ L V G H+ + S G ++ WG
Sbjct: 200 DGTVWAWGRN--DSGQLGDGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGTVWAWG 257
Query: 314 SNENGCLGIG 323
N +G LG G
Sbjct: 258 RNSDGQLGDG 267
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN + +LG G+ R PV A A G H+L L G V+ G N +GQ
Sbjct: 556 WGNNSFFQLGDGTNTQRPTPVRVPGLSGG--VAAAAGYFHSLVLRSDGTVWGWGNNAYGQ 613
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P++++GL V ++ G S A+ DG + WG N GQLG G
Sbjct: 614 LG-NGTANASFSPVQVTGLSGGVA-VAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTT 671
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
++ P+ V LSG A GF S+AV GG + +WG G+LGHG S
Sbjct: 672 RLAPV--GVNGLSGGMAVAAGNGF--SLAVHSGGMLHAWGYNTDGQLGHGGPS 720
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+++ G HS AI DG ++ G N++GQLG G + + +P +V LS A G
Sbjct: 36 RLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSER--RVPAQVVGLSDAVL--VAAGS 91
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A+ G +WG GSG LG G R T + E E V AAG
Sbjct: 92 SHSLAIRSDGTAWAWGHNGSGELGDGTT------FRRTRPVQVTGLSEAEAV-----AAG 140
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCVLTS 305
HS + +G V+ +G + D L R P ++ L +V G H+ +
Sbjct: 141 DGHSLVVRSDGTVWAWGWNS-DGQLGDGTTRERHVPVQVAGLSGGVKVAAGDGHSLAVCL 199
Query: 306 GGELYTWGSNENGCLGIG 323
G ++ WG N++G LG G
Sbjct: 200 DGTVWAWGRNDSGQLGDG 217
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG +P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E + P +I L +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQL------ALSGNNA 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + ++G+V+ FGD + ++ R P
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG HT + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 18/258 (6%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
++L A G H+L L G V + G N GQLG + +P RI L+ V +S
Sbjct: 23 NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLHVALVS 81
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS A+ G ++ WG S GQLG+G+ IP K++ L+GI Q A G S
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA++ G+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
S + +G + +G ++ GN+A +P I L + CG HT VL
Sbjct: 193 SFALSLSGTSFGWGSNNAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Query: 304 TSGGELYTWGSNENGCLG 321
T G+++T+G N G LG
Sbjct: 252 TQDGKVFTFGDNSYGQLG 269
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
++Q ++G HHS + DG + G NS GQLG +K P ++ L + +
Sbjct: 25 LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLHVALVSC 82
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E S+AV G+V +WGA G+LG G+ F +T + P+ IK L G+K+ A
Sbjct: 83 GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
G HS + E+G+V+ +G + ++ F +R + +P ++ V GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L+ G + WGSN G L +
Sbjct: 194 FALSLSGTSFGWGSNNAGQLALS 216
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 21/214 (9%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GG H+ L+ +G + G N+ G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAG 211
Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N +P+ I LK VV IS GY H++ +T DG+++ +G NS GQLG
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG-----SGRLGHG 212
A K P VE + G+ + Q G + ++A + G+V+S+G G S G
Sbjct: 272 PTAEKR--GPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAL 328
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
ESS + L S K+L V+VK AG
Sbjct: 329 AESSDISCLVSA--------KDLADVQVKHIFAG 354
>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1024
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 15/272 (5%)
Query: 46 GDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G GR G RW P A + ++CG H+L + G V+A G GQLG
Sbjct: 53 GQLGRRG----APRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 105 ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
+ E + P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 109 VGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPS 168
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 169 Q-PSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNVQ 221
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
P I L+ + V + G H+A + ++G+V+ FGD + ++ + R P L
Sbjct: 222 VQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGPQL 281
Query: 284 ISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
+ ++ ++ CGG HT + + G++ ++G
Sbjct: 282 VERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 126/255 (49%), Gaps = 24/255 (9%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLR-ISGLKKEVVQISTGYHH 134
A G H L L V++ G N GQLG + L EP++ + LK ++V S G H
Sbjct: 29 ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLV--SCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGVGE-LKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQPSPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVLTSG 306
G + +G + ++ N + +P I L Y + CG HT VL+
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIY---ISCGDEHTAVLSQD 254
Query: 307 GELYTWGSNENGCLG 321
G+++T+G N +G LG
Sbjct: 255 GKVFTFGDNSSGQLG 269
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L + +V P + L + + G E + ++ GKV ++G SG+LG+
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
G P+L++ ++G+ +I G A + G+V FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG---------- 313
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
R PS SK P E + + L S +L
Sbjct: 314 -----RGPSATSK-PTHPEALKENFDIRCLISADDL 343
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G H+ + + ++ G+NS GQLG ++ A +P V+ L + +
Sbjct: 24 ELLQAASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TPR I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEI--------NFTPRKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 145/291 (49%), Gaps = 22/291 (7%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVC-----SAFEKHSLKALACGGAHTLFLTETGCVYATG 96
GN D+G+LG L +L ++ RP + ++ E + + ++CG AH+L LT G V++ G
Sbjct: 61 GNNDHGQLGHDLDTLPNK-RPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 119
Query: 97 LNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
N GQLG G P I + K VVQI++G +H A+T +GELY WG NS GQL
Sbjct: 120 SNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQL 179
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+G + KV P+PT ++ L+G+ A G S AV+ G + WG G+LG
Sbjct: 180 GIGTTSEKV-PMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND-- 236
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S P ++ L + V+ + G S + G V+ G ++
Sbjct: 237 -------LNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSC 289
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
++ P + +L S+ ++ CG HT + S G++Y +G G LGIG
Sbjct: 290 SNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 340
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 19/291 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E P + + + CG +HTLFLT+ G +YA G ND
Sbjct: 6 WGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDH 65
Query: 101 GQLGISENIGYSLEPL-----RISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG + + P R++ L+ ++ IS G HS A+T G+++ WG N+ GQ
Sbjct: 66 GQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ 125
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG + + P P ++ + Q A G +A+T G++ +WG+ G+LG G
Sbjct: 126 LGHDAENGRQ-PTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTT 184
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P LI+ L GV + A G HS + ++G ++ +G ++ +
Sbjct: 185 SEKVPM--------PTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND 236
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N P+ + L + CG + LT+ G ++T G+ G LG G
Sbjct: 237 LNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHG 287
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG ++G+LGLG + + +P K++ + G ++ +T GK+ + G
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRL-----IKELEGVKVKIAAAGFLHSACIDENGR 258
G+LGH L + PR+ + LE + + G HS + G+
Sbjct: 63 NDHGQLGHD--------LDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQ 114
Query: 259 VYIFGDRAVDKMLFQEGNHARRPS--LISKL--PYSEEVVCGGYHTCVLTSGGELYTWGS 314
V+ +G AV + L + + R+P+ +I + + ++ G YH LT+ GELY WGS
Sbjct: 115 VFSWGSNAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGS 173
Query: 315 NENGCLGIG 323
N G LGIG
Sbjct: 174 NSYGQLGIG 182
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L SR P ++ ++CG ++FLT G V+ G FGQ
Sbjct: 224 WGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQ 283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLG 158
LG + + P ++ L ++ QI+ G H+ A + G++Y +G GQLG+G
Sbjct: 284 LG-HGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 340
>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 445
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 139/289 (48%), Gaps = 19/289 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182
Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ ++ I+T H++AIT GELYMWG+
Sbjct: 183 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241
Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 298
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ + P + LEGV++ A G HS + E G+V +G ++
Sbjct: 299 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 351
Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ + P+ I L + V GG + +T GGEL+ WG+ ++ LG+
Sbjct: 352 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGV 400
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
+ IS G HS +T+DG+L++WGK G+LG G++ + +P L+ +F + +
Sbjct: 104 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 156
Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
ALG SVA+T G V +WG GG G LGH T E PR + + K+
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGHKV---------YTRELVPRRVDDSWDCKIS 207
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVD-------KMLFQEGNHARRPSLISKLPYS-EEV 293
A H+A I E+G +Y++G D EG PS + L V
Sbjct: 208 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 267
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CGG+ T LT G+L+ WG+N N LG G
Sbjct: 268 SCGGFFTMALTKEGQLWNWGANSNYELGRG 297
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G +G+LG SL ++ P A + +A GG+ + +T+ G ++ G Q
Sbjct: 338 WGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQ 397
Query: 103 LGISENIGYSLEPLRISGLKKE-------VVQISTGYHHS 135
LG+ P+ ++ L +E V+ IS G H+
Sbjct: 398 LGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHA 437
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 137/297 (46%), Gaps = 29/297 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 287 WGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNA 346
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG V +S G H++ IT G+LY +G + G LG G
Sbjct: 347 GLLGHGSNVSHWI-PKRVSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHG 405
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
+A+ P +VE L G+ T + G + AV GK+ +WG G RL
Sbjct: 406 NRAS--CSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRL 463
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P + L AA G + + +G ++ G V
Sbjct: 464 GHGDRSSKL---------KPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGS-PVYG 513
Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L N R P L+ + EV CG YH VLT+ GE+YTWG NG LG G
Sbjct: 514 QLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHG 570
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G S+ +P + ++ ACG T+ LT +G ++ G +GQ
Sbjct: 455 WGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQ 514
Query: 103 LGISENIGYSLEPLRISGLKKE------VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LG N G R L +E VV+++ G +H + +T GE+Y WGK +NG+LG
Sbjct: 515 LGNPNNDG------RYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLG 568
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G A + +PT VE L K+ A G + A+
Sbjct: 569 HGDIADR--KVPTLVEALKDRSVKRVACGSSFTAAI 602
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 24/196 (12%)
Query: 142 GELYMWGK---NSNGQLGLGKKA-----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ + G + A + +P +E + A G + + VT
Sbjct: 220 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 279
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +G T+ + PRL++ L V++ A G H+ +
Sbjct: 280 RQAEVFTWGEECSGRLGHG-----IG----TNVFQPRLVESLSTCNVELIACGEFHTCAV 330
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS----KLPYSEEVVCGGYHTCVLTSGG 307
G +Y +GD + L G++ P +S LP S V CG +HT ++TS G
Sbjct: 331 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVS-AVSCGTWHTALITSSG 389
Query: 308 ELYTWGSNENGCLGIG 323
+LYT+G G LG G
Sbjct: 390 QLYTFGDGTFGVLGHG 405
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 30/226 (13%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + +V ++ G H++ +T E++ WG+ +G+LG G + P VE
Sbjct: 255 KPLE-SNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHG--IGTNVFQPRLVES 311
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
LS + A G + AVT G + +WG G +G LGHG + S + P+
Sbjct: 312 LSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS---------NVSHWIPKR 362
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--RRPSLISKLP 288
+ L+G+ V + G H+A I +G++Y FGD + GN A P + L
Sbjct: 363 VSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFG--VLGHGNRASCSYPKEVESLK 420
Query: 289 --YSEEVVCGGYHTCVLT---------SGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 421 GLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHG 466
>gi|302847903|ref|XP_002955485.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
nagariensis]
gi|300259327|gb|EFJ43556.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
nagariensis]
Length = 1660
Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 6/180 (3%)
Query: 38 RFAALWGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
R A +G GRLGLG L+S++ P + ++ +S+K +ACGGAHT +T+ G ++ G
Sbjct: 7 RVLATFGTAADGRLGLGFPLKSQFYPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFG 66
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LN +GQLG S + PL + GL VV ++ G +H+ A+T GE++ WG GQLG
Sbjct: 67 LNSWGQLGHSRQDKFVASPLEV-GLPDPVVAVAAGGYHTLALTSAGEVWCWGMAGEGQLG 125
Query: 157 LGKKAAKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+G+ + P V LSG A G S+A+T G++ SWG G G LGHG
Sbjct: 126 IGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRGDQGALGHG 185
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 23/224 (10%)
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG+ + P ++ L + Q++ G H++ +T DG L+ +G NS GQLG +
Sbjct: 18 GRLGLGFPLKSQFYPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFGLNSWGQLGHSR 77
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ K + P +V + A G ++A+T G+V WG G G+LG G+ S
Sbjct: 78 QD-KFVASPLEVGLPDPVVA--VAAGGYHTLALTSAGEVWCWGMAGEGQLGIGEPSEGAT 134
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
R + PRL+ L G V AAG HS + +G ++ +G D+ G A
Sbjct: 135 GGR---QVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRG--DQGALGHGTVA- 188
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G Y + + S G Y WG LG G
Sbjct: 189 -------------ITAGPYSSGAVDSRGNAYVWGYGTGYQLGTG 219
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 19/130 (14%)
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
++G GRLG LGF S++ PR++ L G +K A G H+A + ++G +
Sbjct: 11 TFGTAADGRLG-------LGF-PLKSQFYPRIVASLAGYSIKQVACGGAHTAVVTDDGAL 62
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISK-----LPYSE-EVVCGGYHTCVLTSGGELYTWG 313
+ FG + ++ H+R+ ++ LP V GGYHT LTS GE++ WG
Sbjct: 63 FTFGLNSWGQL-----GHSRQDKFVASPLEVGLPDPVVAVAAGGYHTLALTSAGEVWCWG 117
Query: 314 SNENGCLGIG 323
G LGIG
Sbjct: 118 MAGEGQLGIG 127
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 19/188 (10%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
L +G ++G+LGLG P V L+G KQ A G + VT G + ++G
Sbjct: 9 LATFGTAADGRLGLGFPLKSQF-YPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFGL 67
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH ++ F+ S E L V +AA G+ H+ + G V+ +G
Sbjct: 68 NSWGQLGHSRQDK---FVASPLEVG------LPDPVVAVAAGGY-HTLALTSAGEVWCWG 117
Query: 264 DRAVDKMLFQE------GNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSN 315
++ E G P L+ L + V G +H+ LT GEL++WG
Sbjct: 118 MAGEGQLGIGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRG 177
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 178 DQGALGHG 185
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 14/286 (4%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E P + +++ ACGG+HTL LT+ G +Y G ND
Sbjct: 6 WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N + P IS L+ +V Q+S G HS A+T G+L+ WG N+ GQLG
Sbjct: 66 GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL 125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P P ++ ++ Q + G +A+T G++ +WGA G+LG G +
Sbjct: 126 DMVSY-PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVP 184
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T L+K L G+ + A G HS + ++G ++ +G ++ + +
Sbjct: 185 --------TATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRC 236
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L + CG + LT G ++T G G LG G
Sbjct: 237 YPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHG 282
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 133/275 (48%), Gaps = 21/275 (7%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG +L ++ RP SA E + + ++CG +H+L LT G +++ G N G
Sbjct: 61 GNNDHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ P I + K VVQIS G+ H A+T GEL+ WG N GQLGLG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
KV P T V+ L+GI A G S AV+ G + WG G+LG
Sbjct: 180 GKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD----- 233
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P +K L + V+ + G S + + G V+ G ++ G H
Sbjct: 234 ----SRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQL--GHGTHGNE 287
Query: 281 --PSLISKLPYSE--EVVCGGYHT-CVLTSGGELY 310
P ++ +L S+ ++ CG HT + S G++Y
Sbjct: 288 ILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 11/183 (6%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY WG +G+LGLG + + P +++ +QAA G ++ +T GK+ + G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + P+ I LE V + G HS + G+++ +G
Sbjct: 63 NDHGQLGHDT--------NNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114
Query: 264 DRAVDKMLFQ-EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
A ++ + P +I + ++ CG H LT+ GEL+ WG+NE G L
Sbjct: 115 SNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQL 174
Query: 321 GIG 323
G+G
Sbjct: 175 GLG 177
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 43 WGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +YG+LGLG+ + + + + +ACGG H+ ++++G ++ G N FG
Sbjct: 166 WGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 225
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+++ + P ++ L+ V+ IS G S +T +G ++ G + GQLG G
Sbjct: 226 QLGLND-LDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTH 284
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKV 198
++ +P V L G Q A G + ++A V GKV
Sbjct: 285 GNEI--LPRMVFELMGSKITQIACGRKHTLAFVPSRGKV 321
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L+SR P ++ ++CG ++FLT+ G V+ GL FGQ
Sbjct: 219 WGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQ 278
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELY 145
LG + L + + ++ QI+ G H+ A + G++Y
Sbjct: 279 LGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ + P ++ L
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 14/241 (5%)
Query: 26 ICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
IC +++ + WG G +GRLG E+ P + +ACG HTL
Sbjct: 110 ICDGHMAAVTEDGSVWTWGRGTFGRLGHEVHETGI-PEKVPGLDGMRFVKVACGHVHTLA 168
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL 144
LT+ G V+A G N G +G+S+ + P I L+ K+++ IS G S+A++ + E+
Sbjct: 169 LTDDGRVFAWGNNKTGCVGVSDR--GTCAPQEIESLRGKKIIDISAGMESSAALSAEHEV 226
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y WG ++ GQLGLG + A+ I PT++ L + Q A G +A++ G+V +WG G
Sbjct: 227 YTWGADNYGQLGLG-QGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQG 285
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+ + + P +I L+ +VK+ AAG HSA +D+ GR++ G+
Sbjct: 286 LQGQTAN---------EKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336
Query: 265 R 265
Sbjct: 337 E 337
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 22/285 (7%)
Query: 42 LW--GNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
LW G GD +LG G V V AF+ S+ + H +TE G V+
Sbjct: 68 LWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTW 127
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G FG+LG + + P ++ GL V+++ G+ H+ A+T DG ++ WG N G
Sbjct: 128 GRGTFGRLG--HEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGC 185
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G+ + P ++E L G + G E S A++ +V +WGA G+LG GQ
Sbjct: 186 VGVSDRGTCA---PQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQG 242
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ + P I+ L V + A G H + G VY +G + ++
Sbjct: 243 ARYIS--------QPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEK 294
Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
P +I L S + + GG H+ V+ G L+T G E+
Sbjct: 295 KVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGEEED 339
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 24/281 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G +G+LG+G+ P + + A G T +T+ G ++ G D Q
Sbjct: 19 WGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQGDSNQ 78
Query: 103 LGISENIGYSLEPL------RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LG + S + L GL VV S H +A+T DG ++ WG+ + G+LG
Sbjct: 79 LGHGDTGDCSNQVLPREVEDAFDGLS--VVNCSICDGHMAAVTEDGSVWTWGRGTFGRLG 136
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
IP KV L G+ + A G ++A+T G+V +WG +G +G
Sbjct: 137 ---HEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGCVG------ 187
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEG 275
+ P+ I+ L G K+ +AG SA + VY +G ++ L Q
Sbjct: 188 ----VSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGA 243
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
+ +P+ I L ++ CG YH L++ GE+Y WG
Sbjct: 244 RYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQ 284
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G LY WG GQLG+G + + +P K + A G + A+T GG + ++
Sbjct: 14 GYLYTWGSGQFGQLGIGTQNDESLPQIAKE--IDNEICTFTAAGANTTAAITQGGVLWTF 71
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVY 260
G G S +LGHG +++ PR +++ +G+ V + H A + E+G V+
Sbjct: 72 GQGDSNQLGHGDTGDC------SNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSN 315
+G ++ G+ + K+P + +V CG HT LT G ++ WG+N
Sbjct: 126 TWGRGTFGRL----GHEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNN 181
Query: 316 ENGCLGI 322
+ GC+G+
Sbjct: 182 KTGCVGV 188
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 23/244 (9%)
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-ELYM 146
E G +Y G FGQLGI SL P + E+ + +++A G L+
Sbjct: 12 EGGYLYTWGSGQFGQLGIGTQNDESL-PQIAKEIDNEICTFTAAGANTTAAITQGGVLWT 70
Query: 147 WGKNSNGQLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+G+ + QLG G + +V+P + + G+ ++ AVT G V +WG
Sbjct: 71 FGQGDSNQLGHGDTGDCSNQVLPREVE-DAFDGLSVVNCSICDGHMAAVTEDGSVWTWGR 129
Query: 204 GGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGH E+ I P + L+G++ A G +H+ + ++GRV+ +
Sbjct: 130 GTFGRLGHEVHETGI-----------PEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAW 178
Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
G+ + + G A P I L + ++ G + L++ E+YTWG++ G
Sbjct: 179 GNNKTGCVGVSDRGTCA--PQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQ 236
Query: 320 LGIG 323
LG+G
Sbjct: 237 LGLG 240
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 141/297 (47%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LGLG +E W+P ++ +ACG HTLFLT +G VY
Sbjct: 6 WGNASHGQLGLGGIEDEQILTPSKMPWQP-------DSAVNQIACGHRHTLFLTASGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
A G ND+ QLG + S PL+I L V+ QI+ G HS A+T G++ WG N
Sbjct: 59 ACGSNDYAQLGHELS---SKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNEC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG V+ +P V L Q A G S+A+T G++ +WG+ G+LG
Sbjct: 116 GQLGHASD-QDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLG-- 172
Query: 213 QESSILGFLRSTSEY----TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+++ SE P L+ L G+ V+ A G HS I ++ V+ +G
Sbjct: 173 --------VKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCG 224
Query: 269 KMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 225 QLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 281
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 130/284 (45%), Gaps = 18/284 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L S+ RP+ + +ACG H++ LTE G V + G N+ GQL
Sbjct: 61 GSNDYAQLG-HELSSK-RPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+ K +
Sbjct: 119 GHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGV-KTPS 177
Query: 163 KV--IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P + L GI + A G S ++ V WG G+LG E
Sbjct: 178 ELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE------ 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T+ P +K L + V+ A G S + G V+ G A ++ +
Sbjct: 232 ---TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEML 288
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSG-GELYTWGSNENGCLG 321
P ++ +L S +V CG HT + G +Y +G +G LG
Sbjct: 289 PRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLG 332
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+K+ Q A G ++ +T GKV + G
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH S P I EL + A G HS + E G+V +
Sbjct: 62 SNDYAQLGH-----------ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSW 110
Query: 263 GD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A D+ + Q R +L+SK ++ CG H+ LT GELY WGSN
Sbjct: 111 GDNECGQLGHASDQDVVQLPKTVR--ALVSKTVV--QIACGNNHSLALTCCGELYAWGSN 166
Query: 316 ENGCLGI 322
G LG+
Sbjct: 167 IYGQLGV 173
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 43 WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ + + P++ + ++A+ACGG H+ ++++ V+ G N+
Sbjct: 163 WGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNN 222
Query: 100 FGQLGISE--NIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG+++ N Y L+ LR G++ ++ G S +T +G ++ G + GQL
Sbjct: 223 CGQLGLNDETNRAYPTQLKTLRTLGVRF----VACGDEFSVFLTNEGGVFTCGAGAYGQL 278
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQE 214
G G +++P V L G Q A G ++A V G++ +G G SG+LG
Sbjct: 279 GHGFCGNEMLP--RMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNT 336
Query: 215 SSI 217
S+
Sbjct: 337 KSL 339
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 85 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 143
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 144 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 201
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 202 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 252
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 253 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 310
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 311 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 344
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 39 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 97
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 98 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 157
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 158 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 207
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ + P ++ L
Sbjct: 208 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 267
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 268 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 301
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 237 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 296
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 297 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 349
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 350 --SVILPHHTHFCCTDDVF 366
>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
Length = 376
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 139/289 (48%), Gaps = 19/289 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 54 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 113
Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ ++ I+T H++AIT GELYMWG+
Sbjct: 114 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172
Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 173 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 229
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ + P + LEGV++ A G HS + E G+V +G ++
Sbjct: 230 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 282
Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ + P+ I L + V GG + +T GGEL+ WG+ ++ LG+
Sbjct: 283 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGV 331
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
+ IS G HS +T+DG+L++WGK G+LG G++ + +P L+ +F + +
Sbjct: 35 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 87
Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
ALG SVA+T G V +WG GG G LGH T E PR + + K+
Sbjct: 88 IALGGLHSVALTHQGDVFTWGYGGFGALGHK---------VYTRELVPRRVDDSWDCKIS 138
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVD-------KMLFQEGNHARRPSLISKLPYS-EEV 293
A H+A I E+G +Y++G D EG PS + L V
Sbjct: 139 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 198
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CGG+ T LT G+L+ WG+N N LG G
Sbjct: 199 SCGGFFTMALTKEGQLWNWGANSNYELGRG 228
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G +G+LG SL ++ P A + +A GG+ + +T+ G ++ G Q
Sbjct: 269 WGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQ 328
Query: 103 LGISENIGYSLEPLRISGLKKE-------VVQISTGYHHS 135
LG+ P+ ++ L +E V+ IS G H+
Sbjct: 329 LGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHA 368
>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_a [Mus musculus]
Length = 531
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 128/269 (47%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L G+ V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 283 KERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G ++ +G ++ + P ++ +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLG 216
>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 146/320 (45%), Gaps = 46/320 (14%)
Query: 34 TLQRRFAAL---------WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+L R+ AAL WG G G+LG P + + + +K++ACG T
Sbjct: 311 SLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTC 370
Query: 85 FLTETGCVYATGLNDFG-QLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVD 141
LT++G +YA G N +G LG E P RISG V + ++ G H++ ++
Sbjct: 371 ALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSS 430
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG------- 194
G+L+ +G S G LG G + + P +VE L G+ K A G + A+
Sbjct: 431 GQLFTYGDGSFGVLGHGNLLS--VSQPKEVESLKGLLVKSVACGSWHTAAIVDIIVDRFK 488
Query: 195 ----GGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
GGK+ +WG G GRLGH E +L P + +L + + G +
Sbjct: 489 FNGVGGKLFTWGDGDKGRLGHADLEKKLL----------PTCVAQLVELDFDQVSCGRML 538
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGN-HARRPSLIS-----KLPYSEEVVCGGYHTCVL 303
+ + G+VY G ++ GN HA+ S++ K + +E+ G YH L
Sbjct: 539 TVALTNTGKVYTMGSSVHGQL----GNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAAL 594
Query: 304 TSGGELYTWGSNENGCLGIG 323
TS G LYTWG NG LG+G
Sbjct: 595 TSSGSLYTWGKGTNGQLGLG 614
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG LE + P + + ++CG T+ LT TG VY G + GQ
Sbjct: 499 WGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQ 558
Query: 103 LGISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S+ + + G LK+E V +IS+G +H +A+T G LY WGK +NGQLGLG
Sbjct: 559 LGNPHAKDKSI--VIVEGKLKEEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNV 616
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L + + A G + A+
Sbjct: 617 EDR--NFPTLVEALRDMQVQSIACGSNLTAAI 646
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 115/249 (46%), Gaps = 34/249 (13%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
GCV N FG ++ + L L S + +V IS G H++ IT GE++ WG+
Sbjct: 277 GCVD----NQFGYHN-TKQVDALLPKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGE 331
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG-R 208
S G+ LG K + P VE L G+ K A G Q+ A+T G++ +WG G
Sbjct: 332 GSRGK--LGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGAN 389
Query: 209 LGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG + RS S++ PR I L GV + A G H+A + +G+++ +GD +
Sbjct: 390 LGCEE--------RSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSF 441
Query: 268 DKMLFQEGN--HARRPSLISKLP--YSEEVVCGGYHTCVLTS-----------GGELYTW 312
+ GN +P + L + V CG +HT + GG+L+TW
Sbjct: 442 G--VLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTW 499
Query: 313 GSNENGCLG 321
G + G LG
Sbjct: 500 GDGDKGRLG 508
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 133/254 (52%), Gaps = 17/254 (6%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
S+K +ACGG H++FL E G VY GLN GQLG E G +P +I L + ++ ++
Sbjct: 36 SIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGALADQHIIHVAC 92
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A++ G+L+ WG S+GQLG + IP ++ L+ Q + G +
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCM 151
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ G+ +WG G+LG G+E S+ +P+ +K LEG+ + AAG HS
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKEFP--------SQASPQRVKSLEGIPLAQVAAGGAHS 203
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
+ +G V+ +G ++ + + P + KL +++VV CG HT VLT G
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHV-KLLRTQKVVYISCGEEHTAVLTKSG 262
Query: 308 ELYTWGSNENGCLG 321
++T+G+ G LG
Sbjct: 263 GVFTFGAGSFGQLG 276
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 128/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG + P I
Sbjct: 75 KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134
Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++++ Q+S G H A+ DG+ + WG+N +GQLGLGK+ P +V+ L GI
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-PQRVKSLEGIPL 193
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E T +P +K L K
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDE---------TDRQSPCHVKLLRTQK 244
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 245 VVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 304
Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIG 323
HT + S G +Y +G G LG G
Sbjct: 305 QHTLAFVPSSGLIYAFGCGARGQLGTG 331
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G N+ G
Sbjct: 162 WGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAG 221
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 222 QLGLSDETDRQ-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSM 280
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 281 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 336
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL R P + ++CG HT LT++G V+ G FGQ
Sbjct: 215 WGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 275 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 333
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 334 CNVKCPSPVK 343
>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 1
gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Mus musculus]
Length = 531
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 128/269 (47%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L G+ V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 283 KERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G ++ +G ++ + P ++ +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLG 216
>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_b [Mus musculus]
Length = 563
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 128/269 (47%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 86 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 145
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 146 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 203
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 204 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 254
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L G+ V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 255 TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE 314
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 315 KERVIEIAACHSTHTSAAKTQGGHVYMWG 343
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 131 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 190
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 191 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 249
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 250 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 307
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 308 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 343
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 237 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 296
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 297 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 348
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 349 -SVILPHLTHFCCTDDVF 365
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L + G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA------LSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 130/286 (45%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K A++ GG H L L+ G VY+ G D G
Sbjct: 4001 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDG 4060
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + Y L L E++ I+ G HHS+AIT G LY WGK G+LG G
Sbjct: 4061 KLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4120
Query: 162 AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P VE L A G Q++ VT V SWG G G+LG G
Sbjct: 4121 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P I L G+ V G S + +G VY +G ++ +H R
Sbjct: 4173 ---SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4229
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP ++ L + + G H + GE++TWG N+ G LG G
Sbjct: 4230 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG 4275
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 136/287 (47%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + +K +A GG H L LT+ G V++ G + G
Sbjct: 3019 GEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3078
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N+ +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 3079 KLGHGNNMSLD-KPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3137
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3138 VTQA--RPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG----- 3190
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP +++ L G+ V G S + + G V+ +G ++ +H
Sbjct: 3191 ----SDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3246
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+L+ L + V G H +T G++Y WG N++G G G
Sbjct: 3247 RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3293
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 131/266 (49%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + ++ +ACG H+ + G +Y GL ++G+
Sbjct: 3072 WGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + L + + VVQ++ G + A+T DG +Y WG G+LG G
Sbjct: 3132 LGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGS 3191
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ VE L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3192 DGCYTPL--VVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3246
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 ------RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTS 3296
Query: 279 --RRPSLISKLPYS--EEVVCGGYHT 300
R+PSL+ +L + V CG H+
Sbjct: 3297 VNRKPSLVHELEDARVNRVSCGSSHS 3322
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 144/315 (45%), Gaps = 26/315 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
T +Y +LG K C +R L NG+ + GS E+++ P F
Sbjct: 455 TPFYCDAIAELGIKQLCCT-------ERALMILSLNGNVYNMYHGS-ETQY-PQRVHGFS 505
Query: 70 KHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
+ +A G H L LT+ GCVY+ G D G+LG + + Y L + L+K +V
Sbjct: 506 DKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVF 565
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
I+ G +S+A++V GELY WG+ + G+LG G + IPT V L G A G
Sbjct: 566 IACGSTYSAALSVSGELYTWGRGNYGRLGHGN--FDDVMIPTLVTTLKGHTVVHVACGSG 623
Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
Q++ VT G V SWG G G+LG G + TP+++ +L + V
Sbjct: 624 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 674
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
G SA + +G VY +G ++ H R P +I L +++ G H VL
Sbjct: 675 GSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVL 734
Query: 304 TSGGELYTWGSNENG 318
T +Y WG N+ G
Sbjct: 735 TEDQFVYGWGRNDYG 749
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 4054 WGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGR 4113
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4114 LGHGDS-DDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 4171
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4172 -GSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 4228
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ +
Sbjct: 4229 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALH 4281
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 4282 RPRLVHALQGKKITRVACGSAHT 4304
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 135/290 (46%), Gaps = 23/290 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C + LA GG TLF +T G VY+TG G
Sbjct: 3948 WGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKVYSTGYGAAG 4006
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S I LE ++ +KK V +S+G H A++ +G +Y WG+ +G+LG
Sbjct: 4007 RLGIGGTDSVMIPTLLESIQHVFIKK--VAVSSGGKHCLALSSEGHVYSWGEGDDGKLGH 4064
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G K + P +E L G+ A G S A+T G + +WG G GRLGHG
Sbjct: 4065 GNKMS--YDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4118
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P++++ L+ KV A +G + C+ ++ V+ +GD K+
Sbjct: 4119 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4173
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4174 DGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4223
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 118/252 (46%), Gaps = 37/252 (14%)
Query: 88 ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
+ VY GLND QLG + + L+P+ I+G K + +S
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQ------- 3011
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
+G+LY G+ +NG+LGLG P P + LS K+ A+ G + ++A+T
Sbjct: 3012 ---EGKLYACGEGTNGRLGLGDDNNVCEPKP--IPFLSQFVIKKVAVHSGGKHALALTQD 3066
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV SWG G G+LGHG S+ P+LI+ L+ +++ A G HSA I
Sbjct: 3067 GKVFSWGEGEDGKLGHGNNMSL---------DKPKLIETLKSKRIRDIACGSGHSAAIAS 3117
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYT 311
NG +Y +G ++ + RP L+ L +V CG T LT+ G +Y+
Sbjct: 3118 NGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYS 3177
Query: 312 WGSNENGCLGIG 323
WG + G LG G
Sbjct: 3178 WGDGDFGKLGRG 3189
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 26/322 (8%)
Query: 13 YLKQDIKLGSKLGICKRWISSTLQRRFAA-LWGNGDYGRLGLGSLESRWR-PVVCSAFEK 70
+L D ++ + +R I +T + A +WG D +LG G S+ + PV K
Sbjct: 2935 FLASDWEVLQEQVAVQRSIDATPPQESAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSK 2993
Query: 71 HSLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ- 127
LK + GG+ TLF+ ++ G +YA G G+LG+ ++ EP I L + V++
Sbjct: 2994 --LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNVCEPKPIPFLSQFVIKK 3050
Query: 128 --ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ +G H+ A+T DG+++ WG+ +G+LG G + + P +E L + A G
Sbjct: 3051 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMS--LDKPKLIETLKSKRIRDIACG 3108
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S A+ G++ +WG G GRLGHG + ++ P+L++ L G +V A
Sbjct: 3109 SGHSAAIASNGELYTWGLGEYGRLGHGD---------TVTQARPKLVQTLVGHRVVQVAC 3159
Query: 246 GF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTC 301
G + + +G VY +GD K+ + P ++ +L +V CG +
Sbjct: 3160 GSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSL 3219
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LT GE++TWG + LG G
Sbjct: 3220 ALTKYGEVWTWGKGDYFRLGHG 3241
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 124/249 (49%), Gaps = 21/249 (8%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITV 140
TL +G +Y G N GQLG E L P +S L+ +Q++ G A+T
Sbjct: 3936 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRP--IQLAGGEQTLFAVTA 3993
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG++Y G + G+LG+G + IPT +E + +F K+ A+ G + +A++ G V
Sbjct: 3994 DGKVYSTGYGAAGRLGIG--GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHV 4051
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG + + + R P+LI++L GV++ A G HSA I G
Sbjct: 4052 YSWGEGDDGKLGHGNK---MSYDR------PKLIEDLLGVEIIDIACGGHHSAAITSAGW 4102
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGS 314
+Y +G ++ + + RP ++ L + +V CG T +T +++WG
Sbjct: 4103 LYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD 4162
Query: 315 NENGCLGIG 323
+ G LG G
Sbjct: 4163 GDYGKLGRG 4171
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 119/273 (43%), Gaps = 37/273 (13%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
P C A + +K L C + L+ G VY N+ + E P R+
Sbjct: 456 PFYCDAIAELGIKQLCCTERALMILSLNGNVY--------------NMYHGSETQYPQRV 501
Query: 119 SGLKKEVVQI----STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
G ++V + S G HH A+T DG +Y WG G+LG G + P +E L
Sbjct: 502 HGFSDKLVTMIASHSDGKHHL-ALTQDGCVYSWGNGDGGRLGHGDTVS--YDEPKLIEAL 558
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
A G S A++ G++ +WG G GRLGHG ++ P L+
Sbjct: 559 LEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVM---------IPTLVTT 609
Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
L+G V A +G + C+ +G V+ +GD K+ + ++ P ++ KL
Sbjct: 610 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 669
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG + LT+ GE+YTWG + LG G
Sbjct: 670 VKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHG 702
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ + P + + + H++ +ACG + TL +T +G V++ G D+
Sbjct: 585 WGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 644
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G + L VV++ G S+A+T GE+Y WGK +LG G +
Sbjct: 645 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSE 704
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +E L K ++G + +T V W GR +GQ LG
Sbjct: 705 --EHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGW-----GRNDYGQIDPTLGS 757
Query: 221 LRSTSEYTPRL 231
+ S P L
Sbjct: 758 VISEPTLCPTL 768
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ + RP +A + + ++A G H + ++ G V+ G ND GQ
Sbjct: 4212 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQ 4271
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K++ +++ G H+ A
Sbjct: 4272 LGDGTTSALH-RPRLVHALQGKKITRVACGSAHTLA 4306
>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
Length = 837
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 127/289 (43%), Gaps = 19/289 (6%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
+ R A WG G+LG G+ E R PV S + ALA G +HT L +T V
Sbjct: 492 MNVRTAQCWGRNSSGQLGDGTTERRLTPVTVSGLSAAT--ALAAGDSHTCALLDTRRVRC 549
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P+ +SGL ++ G H+ + G + WG NS+GQ
Sbjct: 550 WGRNSSGQLGDGTRTDR-VTPVAVSGLSGATA-LAAGNSHTCTLLDTGTVQCWGWNSSGQ 607
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + +V P V LSG+ A G + A+ G V WG SG+LG G
Sbjct: 608 LGDGTRTDRVTPA--AVSGLSGV--TALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTR 663
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
T TP + L GV AAG H+ + ++G V +G + ++
Sbjct: 664 ---------TDRVTPAAVSGLSGVTAL--AAGANHTCALMDSGTVQCWGRNSSGQLGDGT 712
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ +S L +V G HTC L G + WG NE G LG G
Sbjct: 713 TTDRVTPAAVSGLSGVTALVAGANHTCALMPTGTVQCWGKNEFGQLGDG 761
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 124/288 (43%), Gaps = 19/288 (6%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
L R WG G+LG G+ R PV S + ALA G +HT L +TG V
Sbjct: 542 LDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVSGLSGAT--ALAAGNSHTCTLLDTGTVQC 599
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P +SGL V ++ G +H+ A+ G + WG+NS+GQ
Sbjct: 600 WGWNSSGQLGDGTRTDR-VTPAAVSGLSG-VTALAAGANHTCALMDSGTVQCWGRNSSGQ 657
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + +V P V LSG+ A G + A+ G V WG SG+LG G
Sbjct: 658 LGDGTRTDRVTPA--AVSGLSGV--TALAAGANHTCALMDSGTVQCWGRNSSGQLGDGT- 712
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+T TP + L GV +A A H+ + G V +G ++
Sbjct: 713 --------TTDRVTPAAVSGLSGVTALVAGAN--HTCALMPTGTVQCWGKNEFGQLGDGT 762
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P +S L + G HTC + + G WG N G LGI
Sbjct: 763 TTDRLTPVAVSGLSGITALAAGSEHTCAVLNTGAARCWGRNLFGRLGI 810
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 128/298 (42%), Gaps = 23/298 (7%)
Query: 28 KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
R + LQ R A WG G+LG G+ E R PV S + +LA G HT L
Sbjct: 435 DRHTCAVLQTRTAQCWGENSPGQLGDGTTERRLTPVTVSGLSGAT--SLAAGDGHTCALM 492
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
G N GQLG L P+ +SGL ++ G H+ A+ + W
Sbjct: 493 NVRTAQCWGRNSSGQLG-DGTTERRLTPVTVSGLSAATA-LAAGDSHTCALLDTRRVRCW 550
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+NS+GQLG G + +V P+ V LSG A G + + G V WG SG
Sbjct: 551 GRNSSGQLGDGTRTDRVTPV--AVSGLSGA--TALAAGNSHTCTLLDTGTVQCWGWNSSG 606
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G T TP + L GV AAG H+ + ++G V +G +
Sbjct: 607 QLGDGTR---------TDRVTPAAVSGLSGVTAL--AAGANHTCALMDSGTVQCWGRNSS 655
Query: 268 DKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ +G R P+ +S L + G HTC L G + WG N +G LG G
Sbjct: 656 GQL--GDGTRTDRVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRNSSGQLGDG 711
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 131/298 (43%), Gaps = 23/298 (7%)
Query: 28 KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
R + L R WG ++G+LG G+ RW PV S + ALA GG HT
Sbjct: 185 DRHTCALLDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLS--GVTALAAGGRHTCAAL 242
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
TG V G N GQLG L P+ +SGL ++ G+ H+ A+ G + W
Sbjct: 243 NTGTVQCWGGNGAGQLGDGTRTSR-LTPMAVSGLSGATA-LAAGFEHTCALLDTGTVRCW 300
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G NS+GQLG G ++ P+ V LSG+ T AA F + AV V WG SG
Sbjct: 301 GLNSSGQLGDGTTERRLTPV--AVSGLSGV-TALAAGDF-HTCAVLQTETVQCWGLNSSG 356
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G L TP + L G AAG +H+ + + G V +G
Sbjct: 357 QLGDGTTERRL---------TPVSVSGLSGSTAL--AAGGVHTCALLQTGTVQCWGRNEF 405
Query: 268 DKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ +G RR P ++S L + + G HTC + WG N G LG G
Sbjct: 406 GQL--GDGTTERRLTPVVVSGLSGATALTAGDRHTCAVLQTRTAQCWGENSPGQLGDG 461
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 127/283 (44%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV S + ALA G HT L TG V GLN GQ
Sbjct: 100 WGWNGSGQLGDGTTTDRAMPVAVSGLS--GVTALAAGRYHTCALLNTGTVQCWGLNSSGQ 157
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + P+ +SGL V+ ++ G H+ A+ + WG+N +GQLG G
Sbjct: 158 LG-DWTITNRVTPVAVSGLSG-VIALAAGDRHTCALLDTRTVRCWGENEHGQLGDGTTND 215
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V LSG+ A G + A G V WG G+G+LG G
Sbjct: 216 RWTPV--AVSGLSGV--TALAAGGRHTCAALNTGTVQCWGGNGAGQLGDGTR-------- 263
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
TS TP + L G AAGF H+ + + G V +G + ++ +G RR
Sbjct: 264 -TSRLTPMAVSGLSGATAL--AAGFEHTCALLDTGTVRCWGLNSSGQL--GDGTTERRLT 318
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S L + G +HTC + + WG N +G LG G
Sbjct: 319 PVAVSGLSGVTALAAGDFHTCAVLQTETVQCWGLNSSGQLGDG 361
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 127/283 (44%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG ++ +R PV S + ALA G HT L +T V G N+ GQ
Sbjct: 150 WGLNSSGQLGDWTITNRVTPVAVSGLS--GVIALAAGDRHTCALLDTRTVRCWGENEHGQ 207
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+ +SGL V ++ G H+ A G + WG N GQLG G + +
Sbjct: 208 LG-DGTTNDRWTPVAVSGLSG-VTALAAGGRHTCAALNTGTVQCWGGNGAGQLGDGTRTS 265
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ V LSG A GFE + A+ G V WG SG+LG G L
Sbjct: 266 RLTPM--AVSGLSGA--TALAAGFEHTCALLDTGTVRCWGLNSSGQLGDGTTERRL---- 317
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
TP + L GV AAG H+ + + V +G + ++ +G RR
Sbjct: 318 -----TPVAVSGLSGVTAL--AAGDFHTCAVLQTETVQCWGLNSSGQL--GDGTTERRLT 368
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S L S + GG HTC L G + WG NE G LG G
Sbjct: 369 PVSVSGLSGSTALAAGGVHTCALLQTGTVQCWGRNEFGQLGDG 411
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 125/291 (42%), Gaps = 23/291 (7%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
LQ WG G+LG G+ E R PV S + ALA GG HT L +TG V
Sbjct: 342 LQTETVQCWGLNSSGQLGDGTTERRLTPVSVSGLSGST--ALAAGGVHTCALLQTGTVQC 399
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N+FGQLG L P+ +SGL ++ G H+ A+ WG+NS GQ
Sbjct: 400 WGRNEFGQLG-DGTTERRLTPVVVSGLSGATA-LTAGDRHTCAVLQTRTAQCWGENSPGQ 457
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G ++ P+ V LSG + A G + A+ WG SG+LG G
Sbjct: 458 LGDGTTERRLTPV--TVSGLSGATSLAA--GDGHTCALMNVRTAQCWGRNSSGQLGDGTT 513
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
L TP + L AAG H+ + + RV +G + ++ +
Sbjct: 514 ERRL---------TPVTVSGLSAATAL--AAGDSHTCALLDTRRVRCWGRNSSGQL--GD 560
Query: 275 GNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G R P +S L + + G HTC L G + WG N +G LG G
Sbjct: 561 GTRTDRVTPVAVSGLSGATALAAGNSHTCTLLDTGTVQCWGWNSSGQLGDG 611
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 132/313 (42%), Gaps = 39/313 (12%)
Query: 15 KQDIKLGSKL--GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
K+ +KL L G+ WI ST G GRL ++ P+ S
Sbjct: 34 KRPVKLDRYLYPGVAHTWIDST-----------GSEGRLMTNPGKAPASPLPLS-----R 77
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ ALA G HT L TG V+ G N GQLG ++ P+ +SGL V ++ G
Sbjct: 78 VIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAM-PVAVSGLSG-VTALAAGR 135
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+H+ A+ G + WG NS+GQLG +V P+ V LSG+ A G + A+
Sbjct: 136 YHTCALLNTGTVQCWGLNSSGQLGDWTITNRVTPV--AVSGLSGVIALAA--GDRHTCAL 191
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
V WG G+LG G + +TP + L GV AAG H+
Sbjct: 192 LDTRTVRCWGENEHGQLGDGT---------TNDRWTPVAVSGLSGVTAL--AAGGRHTCA 240
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
G V +G ++ +G R P +S L + + G HTC L G +
Sbjct: 241 ALNTGTVQCWGGNGAGQL--GDGTRTSRLTPMAVSGLSGATALAAGFEHTCALLDTGTVR 298
Query: 311 TWGSNENGCLGIG 323
WG N +G LG G
Sbjct: 299 CWGLNSSGQLGDG 311
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LG G+ R PV S + ALA G HT + TG G N FG+
Sbjct: 750 WGKNEFGQLGDGTTTDRLTPVAVSGLS--GITALAAGSEHTCAVLNTGAARCWGRNLFGR 807
Query: 103 LGISENIGYSLEPLRISGLKKEVVQI 128
LGIS PL S L + VV I
Sbjct: 808 LGIS--------PLDYSPLPRTVVII 825
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 132/286 (46%), Gaps = 23/286 (8%)
Query: 49 GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
G+ G G+ E R PV + S+ A A G H L + G V++ G ND GQLG+
Sbjct: 527 GQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGL 586
Query: 106 SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
I S P I L+++ + + YHHS+ ++ +GEL +G N GQLGL +
Sbjct: 587 GSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQ 646
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P V+ LS +AA G +VA T G+V S+G G+LG G +I
Sbjct: 647 HTP--QVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNI------ 698
Query: 224 TSEYTPRLIKELEGV---KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TP L+K G K+ + G+ H+ I E G++ +G ++ H
Sbjct: 699 ---KTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNS 755
Query: 281 PSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ LP S ++ CG YH+ +L S G + +G N G LG G
Sbjct: 756 AQFV-PLPMSSKIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAG 800
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 133/291 (45%), Gaps = 23/291 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G +YG L LG S + F ++ +A G + G V+ GLN GQ
Sbjct: 470 GQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMNDGGVFTCGLNKSGQC 529
Query: 104 G---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G E + + +SG+ +V + G H A+ DG ++ WG N GQLGLG
Sbjct: 530 GNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGST 589
Query: 161 AAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
+K P ++ L + AA+ + S V+ G++L++G G+LG H Q
Sbjct: 590 ISKSH-TPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQH--- 645
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
++TP+++ L V AA G H+ +G VY FG ++ +
Sbjct: 646 --------QHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARN 697
Query: 278 ARRPSLI-SKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P+L+ + L S+E V CG YHT ++ G+L TWG N+ G LGIG
Sbjct: 698 IKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 748
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 18/227 (7%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG D G+LGLGS +S ++ S EK+ + A H+ ++ G + G+ND
Sbjct: 576 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC 635
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ ++ + P + L +VV + + G +H+ A T DGE+Y +GKN GQLGLG
Sbjct: 636 GQLGL-DHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGH 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
A+ I P V+ G ++ + G+ +V ++ GK+++WG G+LG G +
Sbjct: 695 --ARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEH 752
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
++++++ P + K+K A+ G HS + NGRV +FG
Sbjct: 753 -----KNSAQFVPLPMSS----KIKNASCGCYHSLILMSNGRVMVFG 790
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 27/234 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D G+LGL + + P V A + ACG HT+ T G VY+ G ND+GQ
Sbjct: 630 FGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQ 689
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG- 158
LG+ L + L +++V +S GY+H+ I+ G+L WG+N GQLG+G
Sbjct: 690 LGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGS 749
Query: 159 ---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
K +A+ +P+P + K A+ G S+ + G+V+ +G G+LG G +
Sbjct: 750 KEHKNSAQFVPLPMSSK------IKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGART 803
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
L S P L +V AAGF S YI R+ D
Sbjct: 804 -----LSSADLPLPVPSNSLANDEVVRIAAGFYSS---------YILTGRSSDN 843
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV S + AL+ ++TL L G V+A G N +GQ
Sbjct: 220 WGSNFSGQLGDGTATPRLSPVQVSGLTN--VVALSADDSYTLALRTDGTVWAWGYNSYGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL VV +S GY HS A+ DG ++ WG N NGQLG G
Sbjct: 278 LGDGTTT-PRLSPVQVPGLTN-VVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQ 335
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP V L + A G+ S+A+ G V +WG G+LG G
Sbjct: 336 RSPSIP--VFGLIDVVALSA--GYSHSLALRTDGTVWAWGYNSLGQLGDG---------- 381
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ P ++ + V +AG HS + +G V +G ++ H P
Sbjct: 382 -TTIPRPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPV 440
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + GG HT L + G ++ WGSN +G LG G
Sbjct: 441 QVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDG 481
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 134/283 (47%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + AL+ GG HTL L G V+A G N GQ
Sbjct: 420 WGVNYSGQLGDGTTTHRLSPVQVPDLTD--VVALSAGGNHTLALRTNGTVWAWGSNSDGQ 477
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL VV +S GY+HS A+ DG ++ WG NS+GQLG G
Sbjct: 478 LGDGTTT-PRLSPVQMLGLTN-VVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTH 535
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + A G S+A+ G V +WG+ S +LG G
Sbjct: 536 RLTPV--QVPGLTDVVALSA--GDSHSLALRTDGTVWAWGSNSSSQLGDGT--------- 582
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+T +P + L V +AG HS + +G V+ +G ++ +G R
Sbjct: 583 TTPRGSPVQVPGL--TDVVALSAGGAHSLALRTDGTVWAWGSNYYGQL--GDGTTTPRLF 638
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L+S L + + G H+ L + G WG+N G LG G
Sbjct: 639 PVLVSNLTGTSNLYAGAGHSLALRTDGTGRAWGNNYGGQLGDG 681
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 140/284 (49%), Gaps = 25/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + AL+ G +H+L L G V A G+N GQ
Sbjct: 370 WGYNSLGQLGDGTTIPRPSPVQVPDLTD--VVALSAGDSHSLALRTDGTVRAWGVNYSGQ 427
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++ L +VV +S G +H+ A+ +G ++ WG NS+GQLG G
Sbjct: 428 LGDGTTT-HRLSPVQVPDL-TDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTP 485
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ ++ L+ + A G+ S+AV G V +WG+ G+LG G
Sbjct: 486 RLSPV--QMLGLTNVVALSA--GYYHSLAVHTDGTVWAWGSNSDGQLGDGT--------- 532
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L V +AG HS + +G V+ +G + ++ +G R S
Sbjct: 533 TTHRLTPVQVPGL--TDVVALSAGDSHSLALRTDGTVWAWGSNSSSQL--GDGTTTPRGS 588
Query: 283 LISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++P +VV GG H+ L + G ++ WGSN G LG G
Sbjct: 589 PV-QVPGLTDVVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDG 631
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 129/253 (50%), Gaps = 27/253 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G +H+L L G V+A G N GQLG P+++ GL +VV +S G HH
Sbjct: 1 MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRG-SPVQVPGLT-DVVALSAGNHHC 58
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG NS+GQLG G ++ + +V L+ + A G ++A+
Sbjct: 59 LALRTDGTVWAWGSNSSGQLGDGTTTPRLSSV--QVPGLTDVVALSA--GSSYTLALRTD 114
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIA-AAGFLHSACI 253
G V +WG G+LG G TPRL ++ G+ +A ++G HS +
Sbjct: 115 GTVWAWGYNFYGQLGDGTT-------------TPRLAPVQVPGLTDVVALSSGIYHSLAL 161
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
+G V+ +GD A ++ +G RR S + ++P +VV GGYH+ + + G ++
Sbjct: 162 RTDGTVWAWGDNASGQL--GDGTATRRLSPV-QVPGLTDVVALSAGGYHSLAVRTDGTVW 218
Query: 311 TWGSNENGCLGIG 323
WGSN +G LG G
Sbjct: 219 AWGSNFSGQLGDG 231
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 143/286 (50%), Gaps = 29/286 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R V + AL+ G ++TL L G V+A G N +GQ
Sbjct: 70 WGSNSSGQLGDGTTTPRLSSVQVPGLTD--VVALSAGSSYTLALRTDGTVWAWGYNFYGQ 127
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL +VV +S+G +HS A+ DG ++ WG N++GQLG G
Sbjct: 128 LGDGTTT-PRLAPVQVPGLT-DVVALSSGIYHSLALRTDGTVWAWGDNASGQLGDGTATR 185
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + A G S+AV G V +WG+ SG+LG G
Sbjct: 186 RLSPV--QVPGLTDVVALSA--GGYHSLAVRTDGTVWAWGSNFSGQLGDGTA-------- 233
Query: 223 STSEYTPRLIK-ELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TPRL ++ G+ +A +A ++ + +G V+ +G + ++ +G R
Sbjct: 234 -----TPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQL--GDGTTTPR 286
Query: 281 PSLISKLPYSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIG 323
S + ++P VV GY H+ L + G ++ WG N NG LG G
Sbjct: 287 LSPV-QVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNG 331
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + AL+ G H L L G V+A G N GQ
Sbjct: 20 WGSNSSGQLGDGTTTPRGSPVQVPGLTD--VVALSAGNHHCLALRTDGTVWAWGSNSSGQ 77
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L +++ GL +VV +S G ++ A+ DG ++ WG N GQLG G
Sbjct: 78 LGDGTTT-PRLSSVQVPGL-TDVVALSAGSSYTLALRTDGTVWAWGYNFYGQLGDGTTTP 135
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + + G S+A+ G V +WG SG+LG G
Sbjct: 136 RLAPV--QVPGLTDVVALSS--GIYHSLALRTDGTVWAWGDNASGQLGDGT--------- 182
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T +P + L V V ++A G+ HS + +G V+ +G ++ P
Sbjct: 183 ATRRLSPVQVPGLTDV-VALSAGGY-HSLAVRTDGTVWAWGSNFSGQLGDGTATPRLSPV 240
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + +T L + G ++ WG N G LG G
Sbjct: 241 QVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGDG 281
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + AL+ G +H+L L G V+A G N Q
Sbjct: 520 WGSNSDGQLGDGTTTHRLTPVQVPGLTD--VVALSAGDSHSLALRTDGTVWAWGSNSSSQ 577
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+++ GL +VV +S G HS A+ DG ++ WG N GQLG G
Sbjct: 578 LGDGTTTPRG-SPVQVPGLT-DVVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTP 635
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P+ V L+G A G ++ G G+ +WG G+LG G + L
Sbjct: 636 RLFPV--LVSNLTGTSNLYAGAGHSLALRTDGTGR--AWGNNYGGQLGDGTSAFFL 687
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +LG G+ R PV + AL+ GGAH+L L G V+A G N +GQ
Sbjct: 570 WGSNSSSQLGDGTTTPRGSPVQVPGLTD--VVALSAGGAHSLALRTDGTVWAWGSNYYGQ 627
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+ +S L + G HS A+ DG WG N GQLG G A
Sbjct: 628 LGDGTTT-PRLFPVLVSNLTG-TSNLYAGAGHSLALRTDGTGRAWGNNYGGQLGDGTSAF 685
Query: 163 KVIPI 167
+ P+
Sbjct: 686 FLHPV 690
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 133/258 (51%), Gaps = 22/258 (8%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
L+ A G H+L L G +++ G N GQLG + + P RI L V +S G
Sbjct: 25 LRQAASGERHSLLLLSNGELHSCGDNSQGQLG-RKGVQRDEHPKRIRTLDNLRVDLVSCG 83
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
HS A+ G ++ WG S GQLG+G+ ++ IPTK++ L+GI Q + G S+A
Sbjct: 84 KEHSLAVCYKGRVFAWGAGSEGQLGVGE-FKEINLIPTKIKTLTGIKIIQVSCGHYHSLA 142
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ GG+V SWG+ G+LG G+E S+ +P+ ++ L+G+ + AAG HS
Sbjct: 143 LSEGGQVFSWGSNSHGQLGLGKECP--------SQASPQRVRSLDGIPLTQVAAGGAHSF 194
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP-----YSEEVVCGGYHTCVL 303
+ +G + +G ++ ++ N + +P I L Y + CG HT VL
Sbjct: 195 ALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIY---ISCGYEHTAVL 251
Query: 304 TSGGELYTWGSNENGCLG 321
T G+++T+G N G LG
Sbjct: 252 TQTGKVFTFGGNSYGQLG 269
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG ++ P + + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ E +L P +I L +++Q+S G++HS A++ G+++ WG NS+GQLGLGK+
Sbjct: 108 GVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L Q +
Sbjct: 168 SQAS-PQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNV------ 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ PR I L+ + V + G+ H+A + + G+V+ FG + ++ P
Sbjct: 221 PVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTC--VLTSG 306
L+ + ++ CG YHT V T+G
Sbjct: 281 LVEGIDGLVSQIDCGSYHTLAYVYTTG 307
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + +GEL+ G NS GQ LG+K + P ++ L + +
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSCGDNSQGQ--LGRKGVQRDEHPKRIRTLDNLRVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I P IK L G+K+
Sbjct: 82 CGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEI--------NLIPTKIKTLTGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + E G+V+ +G + ++ L +E P + L P + +V GG H
Sbjct: 134 SCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLT-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLSGASFGWGSNNAGQLAL 215
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E P + ++CG H+L L+E G V++
Sbjct: 95 RVFA--WGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L + Q++ G HS A+++ G + WG N+ GQ
Sbjct: 153 GSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + +P+ P + L + + G+E + +T GKV ++G G+LG
Sbjct: 213 LALRQNN---VPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
H + G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 HSPTAEKEG---------PQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 6/168 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +G+LGLG S+ P + + L +A GGAH+ L+ +G + G N+ G
Sbjct: 152 WGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAG 211
Query: 102 QLGISEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL + +N S +P I LK V+ IS GY H++ +T G+++ +G NS GQLG
Sbjct: 212 QLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
A K P VE + G+ ++ + V GKV+S+G G S
Sbjct: 272 PTAEK--EGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFGRGPS 317
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 16/149 (10%)
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+QAA G S+ + G++ S G G+LG G R + P+ I+ L+ ++
Sbjct: 26 RQAASGERHSLLLLSNGELHSCGDNSQGQLGRK------GVQR---DEHPKRIRTLDNLR 76
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVV 294
V + + G HS + GRV+ +G + ++ F+E N P+ I L + +V
Sbjct: 77 VDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLI--PTKIKTLTGIKIIQVS 134
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG YH+ L+ GG++++WGSN +G LG+G
Sbjct: 135 CGHYHSLALSEGGQVFSWGSNSHGQLGLG 163
>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
distachyon]
Length = 1090
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 335 WGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNEVSHWM-PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKDTRL---------VPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 621
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 32/269 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
++ ++CGG H +T+ G VY+ G G+LG + +P + L ++ ++
Sbjct: 312 DVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP-QPKLVEALAHMNIELVAC 370
Query: 131 GYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
G +H+ A+T+ G+LY WG + G LG G + + +P L GI + G
Sbjct: 371 GEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGP-LEGIHVSSISCGPWH 429
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA G
Sbjct: 430 TAVVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAACGVW 480
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
H+A + E +G+++ +GD DK G+ R P+ ++ L P +
Sbjct: 481 HTAAVVEVMVGNSSTSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVASLVEPNFCQ 538
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS+ G LG
Sbjct: 539 VACGHCFTVALTTSGHVYTMGSSVYGQLG 567
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL +G + +V IS G H++ +T GE+Y WG+ S G+LG G +P P VE
Sbjct: 303 KPLEFAG-RLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD--VPQPKLVEA 359
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTP-R 230
L+ + + A G + AVT G + +WG G G LGHG E S + P R
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNE---------VSHWMPKR 410
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
L LEG+ V + G H+A + G+++ FGD + + + P + L
Sbjct: 411 LNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGL 470
Query: 289 YSEEVVCGGYHTCVLT------------SGGELYTWGSNENGCLGIG 323
+ CG +HT + S G+++TWG + G LG G
Sbjct: 471 RTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHG 517
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ++R P ++ + + +ACG T+ LT +G VY G + +GQ
Sbjct: 506 WGDGDKGRLGHGDKDTRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQ 565
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G + P R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 566 LGNPQADG--MVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 623
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L + G + A+
Sbjct: 624 DDRN--SPTLVEALKDKQVRSVVCGINFTAAI 653
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 22/195 (11%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G+++MWG+ + N + G A +P +E + + + G + VT
Sbjct: 268 GDVFMWGEGTGEGILGGGNSRFGNSSGAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVT 327
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG GRLGHG + + P+L++ L + +++ A G H+ +
Sbjct: 328 KQGEVYSWGEESGGRLGHGVDCDVP---------QPKLVEALAHMNIELVACGEYHTCAV 378
Query: 254 DENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
+G +Y +G+ + L GN H L L + + CG +HT V+TS G+
Sbjct: 379 TLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQ 438
Query: 309 LYTWGSNENGCLGIG 323
L+T+G G LG G
Sbjct: 439 LFTFGDGSFGVLGHG 453
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 135/290 (46%), Gaps = 27/290 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG GD GRLG + R+ P V + ++ +ACGG+HT+ L G V++ G G
Sbjct: 166 LWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQG 225
Query: 102 QLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N+ PL I G ++ VV ++ +HS+ I+ DG LY WGK + LG
Sbjct: 226 CLG-HGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGK-AGPFLGYMD 283
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P V+ L G Q A G ++ + G+V S+G G LG G + +I
Sbjct: 284 DSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAIT- 342
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P ++ L V + + G HSA IDE+G ++++G A ++
Sbjct: 343 --------KPTMVPNL--VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQL-----GQGE 387
Query: 280 RPSLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
SL S P + E+V CG HT +T+ G Y WG N + G+
Sbjct: 388 PKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGV 437
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 106/264 (40%), Gaps = 49/264 (18%)
Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG--ELYMWGKNSNGQLGLGKKAAKV 164
E + L +R S + ++ +++ G + + D +LY+WG G+LG K K
Sbjct: 125 EAVSAKLVEMRGSIVSEDRLEVQLGTIKTKVLLKDNSCDLYLWGGGDRGRLG--HKDDKP 182
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH------------- 211
+P VE L G A G ++A+ G+V SWGAG G LGH
Sbjct: 183 RFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDRYSPLMID 242
Query: 212 ------------------------------GQESSILGFLRS--TSEYTPRLIKELEGVK 239
G+ LG++ T + PRL+ L G +
Sbjct: 243 GPLRDVNVVHVACYENHSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTR 302
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ A G H+ IDE GRVY FG ++ +P+++ L +V CG +H
Sbjct: 303 IVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNLVSICKVSCGRHH 362
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ + G L+ WG G LG G
Sbjct: 363 SAAIDEDGVLFMWGWGARGQLGQG 386
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G +G LG G ++ +P + S+ ++CG H+ + E G ++ G GQ
Sbjct: 325 FGINKFGELGQGHDKAITKPTMVPNLV--SICKVSCGRHHSAAIDEDGVLFMWGWGARGQ 382
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E P ++G + ++ +S GY H++AIT +G Y WG N++ Q G+
Sbjct: 383 LGQGEPKSL-FSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSV 441
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P + SGI Q G +V VT G++ +WG SG+LG+G+
Sbjct: 442 YGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFS-- 499
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
P ++ L +VK+ A G H C+
Sbjct: 500 ------QPMPVESLSEKRVKMVACGEDHIGCL 525
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G G+LG G +S + P + F L+ ++CG HT +T G Y G N
Sbjct: 374 MWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASS 433
Query: 102 QLGISENIGYSLEPLR----ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
Q G+ ++ L R SG++ QI+ G + + +T G+L+ WG N +GQLG
Sbjct: 434 QCGVPSSVYGELSSPRGIVLPSGIRP--TQINCGANFTVLVTSIGQLFTWGCNMSGQLGN 491
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
G +A K P VE LS K A G + + G G V
Sbjct: 492 G-EAKKTFSQPMPVESLSEKRVKMVACGEDHIGCLVGHGWV 531
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 142/288 (49%), Gaps = 25/288 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-----FEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG Y G S +P++ + S+K +ACGG H++FL E G VY G+
Sbjct: 63 WG---YWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGV 119
Query: 98 NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG E G +P +I L + ++ ++ G HS A++ G L+ WG S+GQLG
Sbjct: 120 NTKGQLG-HEKEGS--KPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLG 176
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L V +P ++ L+ Q + G +A+ G+ +WG G+LG G+E
Sbjct: 177 LTTTEDSVA-VPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFP 235
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S+ +P+ +K L+G+ + AAG HS + +G V+ +G ++ +
Sbjct: 236 --------SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQ 287
Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P + KL +++VV CG HT VLT G ++T+G+ G LG
Sbjct: 288 DRESPCHV-KLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLG 334
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG++ P I
Sbjct: 133 KPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKK 192
Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L +E++ Q+S G H A+ DG+ + WG+NS+GQLGLGK+ P +V+ L GI
Sbjct: 193 LNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQAS-PQRVKSLDGIPL 251
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG SG+LG E +P +K L K
Sbjct: 252 AQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQ---------DRESPCHVKLLRTQK 302
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + + G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 303 VVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGR 362
Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIG 323
HT + S G +Y +G G LG G
Sbjct: 363 QHTLAFVPSSGLIYAFGCGIKGQLGSG 389
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + + L +A GGAH+ L+ +G V+ G N G
Sbjct: 220 WGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSG 279
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 280 QLGLSDEQDRE-SPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSF 338
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 339 NDEVNP--RRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHTCNL 394
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL + R P + ++CG HT LT+TG V+ G GQ
Sbjct: 273 WGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQ 332
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG ++ + P R+ L EV QI+ G H+ A + G +Y +G GQLG G
Sbjct: 333 LG-HDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHT 391
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 392 CNLKCPSPVK 401
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S G G +I P + K+ A G S+ + G+V + G
Sbjct: 63 WGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTK 122
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E S P I L + A G HS + + GR++ +G +
Sbjct: 123 GQLGHEKEGS-----------KPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGS 171
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ + WG N +G LG+G
Sbjct: 172 DGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLG 231
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 23/281 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LG G +S P + +L+ G G H + +T G VY+ G N +
Sbjct: 44 VMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + +L P ++S + K+ + ++ G HHS +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162
Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP KV CL A G S+AV G+V +WG G+G+LG G
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG----- 215
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP I L+G++V+ G+ H+ + + G +Y +G + ++ GN
Sbjct: 216 ----SSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQL--GTGNK 269
Query: 278 ARRPSLISKLPYSEEVV----CGGYHTCVLTS-GGELYTWG 313
+ + + + E +V C HT S G++Y WG
Sbjct: 270 SNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 116/253 (45%), Gaps = 22/253 (8%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+LT+ V+ G N G LG + LEP RI L K +V +S G H
Sbjct: 29 AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI-LEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
+T DGE+Y WG N+ QLG G + P + + K+A A G S+ +T
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAISVACGSHHSMVLT 143
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
G+V +WG SG++G G + ++ PR + L+ V A G + S
Sbjct: 144 CDGEVYAWGYNNSGQVGSG---------STANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ +NG VY +G ++ + P I+ L E+VVCG HT LT G +Y
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254
Query: 311 TWGSNENGCLGIG 323
WG+N G LG G
Sbjct: 255 AWGANSYGQLGTG 267
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLGS ++ P +A + ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ K+ +V+I+ + H S+A + G++YMWG+ GQ
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315
Query: 161 AAKVIPIPTKVECLSGIF 178
+ + P T C +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 22/257 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G +++ P V + + + CG HT+ LT+ G VY G +++GQ
Sbjct: 713 WGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQ 772
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + Y +P+ ++ L+K V+QI++G H + +T E+ ++G G A
Sbjct: 773 LGLGDTTRYC-KPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGN------GAAMGA 825
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A +I IPT V L + + G + A++ G V +WG G LGHG
Sbjct: 826 ASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTG--QELGHGN-------- 875
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ +E TP+L++ L ++ + G H+A + ++GR++ G + ++ Q G+ +P
Sbjct: 876 -NQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQAGDQ-NKP 933
Query: 282 SLISKLPYSE--EVVCG 296
I L + V CG
Sbjct: 934 KKIESLTKTTFISVSCG 950
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 27/284 (9%)
Query: 43 WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ +LG +S+ P F + +++ G ++ LTE G VY G
Sbjct: 603 WGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWGRGS 662
Query: 100 FGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
LGI + I L P+++ L ++V +S G++HS+A+ +GEL WG GQ
Sbjct: 663 VKNPPVPVLGIPQ-IEDQLLPIKLESLT-DIVVVSIGFYHSAAVRANGELLTWGVGEEGQ 720
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G +V P ++ L+ + Q G + ++ +T GKV +WG+ G+LG G
Sbjct: 721 LGHGDTQNQV--EPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGD- 777
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+T P + LE V A+G H A + + V +FG+ A
Sbjct: 778 --------TTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGAA----MGA 825
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ P+L+ L Y +++ CG Y T ++ G++YTWG+ +
Sbjct: 826 ASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQ 869
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 134 HSSAITVDGE--LYMWGKNSNGQLGLGKKAAK--VIPIPTKVECLSGIFTKQAALGFEQS 189
H SAI +D L WG SN +LG K A+K P P ++ + + G S
Sbjct: 588 HRSAIHLDTSRGLMTWGSASNCKLGF-KVASKEQSQPTPERLPNFNVSDICSISSGSYYS 646
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G V WG G +LG + + P ++ L + + + GF H
Sbjct: 647 AALTENGDVYMWGRGSV----KNPPVPVLGIPQIEDQLLPIKLESL--TDIVVVSIGFYH 700
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGG 307
SA + NG + +G ++ + + P +I L + +V CG HT LT G
Sbjct: 701 SAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNG 760
Query: 308 ELYTWGSNENGCLGIG 323
++YTWGS+E G LG+G
Sbjct: 761 KVYTWGSSEYGQLGLG 776
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 62 GCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLG-NG 120
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 121 TTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQ-- 178
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 179 PIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGS---------SG 229
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
+ TP I L+G++V+ A G+ H+ + ++G+VY +G + ++ GN + +
Sbjct: 230 NHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQL--GTGNKSNQSYPT 287
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 288 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 321
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 128/275 (46%), Gaps = 22/275 (8%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L++T ++ G N G LG+ + I ++E
Sbjct: 16 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYMTVNDEIFVLGTNCCGCLGLGD-IQSTIE 74
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G +P
Sbjct: 75 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTN 134
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 135 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGS---------TANQPIPRRV 184
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP-- 288
L+ V A G + S + ++G VY++G ++ L GNH+ P I+ L
Sbjct: 185 TGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHST-PCRIAALQGI 243
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 244 RVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTG 278
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS + P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 214 VWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYG 273
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 274 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 326
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T + C +F
Sbjct: 327 --SVILPHLTHLSCTDDVF 343
>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
Length = 685
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 135/299 (45%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327
Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + R P L+ E +V CG YH VLT E++TWG NG LG G
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHG 386
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G ESR +P ++ + +ACG + T+ LT +G V + G + +GQ
Sbjct: 271 WGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQ 330
Query: 103 LGISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G L RI+G + V+Q++ G +H + +T E++ WGK +NG+LG G
Sbjct: 331 LGNPNSDGRLPCLVEDRIAG--EHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDI 388
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT+VE L + A G + A+
Sbjct: 389 EDR--KVPTQVEALKDRAVRHIACGANFTAAI 418
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I L+G+ V + G H+A I G+++ FGD + + P + L
Sbjct: 177 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHG 282
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 19/284 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DYG+LG + RP V +A + S++ ++CG H L + + V++ G +D GQL
Sbjct: 59 GSNDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQL 116
Query: 104 GISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G + G S P + L ++VQ++ G HS A++ DG ++ WG NS+GQLG+G
Sbjct: 117 GHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIG-- 174
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ K P P ++ L+GI Q G S ++ G V +G G+LG G
Sbjct: 175 STKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGD------- 227
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ P +K L +KV + G H+A + +G V FG + ++ NH
Sbjct: 228 --TGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEAL 285
Query: 281 PSLISKLPYSE--EVVCGGYHTCV-LTSGGELYTWGSNENGCLG 321
P + +L E ++ CG HT + S G +Y++G NG LG
Sbjct: 286 PRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 140/288 (48%), Gaps = 24/288 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-----HSLKALACGGAHTLFLTETGCVYATGL 97
WG G LGLG +E V+ + E+ +++ ++CG HT+F+ G VY G
Sbjct: 4 WGAARNGELGLGGIEED---VILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
ND+GQLG ++ G+ P I+ L + + Q+S G +H+ + +++ WG + GQLG
Sbjct: 61 NDYGQLG--QDKGHK-RPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLG 117
Query: 157 LGKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+A P V+ LS + Q A G + S+A++ G++ SWG G+LG G
Sbjct: 118 HTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGS-- 175
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ ++ P+ + L G+ AG HS + ++G V+ FG ++ +
Sbjct: 176 -------TKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDT 228
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ P+ + L + + CG HT VLT G + T+G+ G LG
Sbjct: 229 GDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLG 276
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 5/170 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +G+LG+GS +++ +P ++ + GG+H+ L+++G V+ G N FGQ
Sbjct: 163 WGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQ 222
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + G P + L+ +V IS G H++ +T+DG + +G S GQLG
Sbjct: 223 LGLGDT-GDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNN 281
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLG 210
+ +P KV L G+ Q A G ++A V G++ S+G GG+G+LG
Sbjct: 282 HEA--LPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
G K + ++S G H+ + +G +Y G N GQLG K + PT + L
Sbjct: 31 GATKAMREVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKR----PTVITALDTQSI 86
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+Q + G ++ V +V SWG G+LGH E+ + PR++KEL ++
Sbjct: 87 QQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAG------GNNSRRPRMVKELSSLQ 140
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVCG 296
+ A G HS + +GR++ +G+ + ++ + +P ++ L P+ + +V G
Sbjct: 141 IVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQ-IVAG 199
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
G H+ VL+ G ++ +G N G LG+G
Sbjct: 200 GSHSFVLSKSGAVFGFGRNTFGQLGLG 226
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG NG+LGLG VI P + + ++ + G + +V V G V + G+
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG + G R P +I L+ ++ + G H+ +++ +V+ +G
Sbjct: 61 NDYGQLGQDK-----GHKR------PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWG 109
Query: 264 DRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
++ L GN++RRP ++ +L + +V CGG H+ L++ G +++WG+N +G
Sbjct: 110 YDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHG 169
Query: 319 CLGIG 323
LGIG
Sbjct: 170 QLGIG 174
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 133/289 (46%), Gaps = 15/289 (5%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G YG LGLG ++ R P F++ ++ +A G H LT G V G N G
Sbjct: 43 VFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSG 102
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG N S P +I LK + IS+ G + + I+ DG+LY G N+ GQLG G
Sbjct: 103 QLGHGNNKSIST-PKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHG 161
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG---GSGRLGHGQES 215
++ + PT V+ L + + S+ VT + S GR +GQ
Sbjct: 162 TQSN--LSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQ-- 217
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
LG + E TP++I+ L +V A G HS + +G V+ G ++ +
Sbjct: 218 --LGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDT 275
Query: 276 NHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+P LI L + + CG YHT V GE+Y +G N+ G LGI
Sbjct: 276 KSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGI 324
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 139/297 (46%), Gaps = 29/297 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET--------GCVYAT 95
G +YG+LG G+ + P + A + + ++C H+L +T+ VY+
Sbjct: 151 GYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSV 210
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G ND GQLG E+ + + P I L ++V+Q + G HHS +TV GE++ G N NGQ
Sbjct: 211 GRNDNGQLG-QEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQ 269
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG ++ P+ +E L F QAA G+ ++ G++ ++G G+LG
Sbjct: 270 LGHNDTKSRNQPVL--IESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETN 327
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG----FLHSACIDENGRVYIFGDR-AVDK 269
L P+ I+E V I +G LHS G+ A+ +
Sbjct: 328 GQAL--------IQPKQIQEFLTVS-NIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQ 378
Query: 270 MLFQEGN-HARRPSL--ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + N + ++P + +SK ++ CG YH+ L G+L+T+G +G LG G
Sbjct: 379 GLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQG 435
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 15/266 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG P + + + ACG H++F+T G V++ G ND GQL
Sbjct: 211 GRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQL 270
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G ++ + +P+ I LK K +VQ + GY+H+ GE+Y +G+N GQLG+
Sbjct: 271 GHNDTKSRN-QPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQ 329
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHG-QESSILGF 220
+I P +++ + Q + G + + + S G SG + G ES+ L
Sbjct: 330 ALIQ-PKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNN 388
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ +Y + V + A G HS + E+G+++ FG R L Q ++
Sbjct: 389 QQPQVQYLSK------KVNISKIACGCYHSIALCESGQLFTFG-RGNHGQLGQGNTEDQK 441
Query: 281 -PSLISKLPYSEEV-VCGG-YHTCVL 303
P ++ L + + + GG YHT VL
Sbjct: 442 LPKQVASLHDKKVIGIAGGFYHTIVL 467
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 23/190 (12%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++++G+NS G+LGLG + IP++V + Q A G E +T G VL+ G
Sbjct: 41 VFVFGQNSYGELGLGDVQER--SIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRVYI 261
GSG+LGHG SI TP+ I+ L+ +++ +A G + A I ++G++Y
Sbjct: 99 NGSGQLGHGNNKSI---------STPKKIESLKNIRITHISSANGCENLAIISQDGKLYT 149
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSG--------GELYT 311
G ++ ++ P+L+ L ++ V C YH+ ++T +Y+
Sbjct: 150 CGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYS 209
Query: 312 WGSNENGCLG 321
G N+NG LG
Sbjct: 210 VGRNDNGQLG 219
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 335
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + G VY++G ++ + P IS L
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P SA + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 135/286 (47%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG+G + P C+ F LK + CGG H++FL G VY G N G
Sbjct: 4 WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ + P + L +++ +S G HS A+ G+++ WG GQLGLG
Sbjct: 64 QLGHNKP---GITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTT 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
V IP ++ L Q G + +A++ G++ +WG SG+LG G+
Sbjct: 121 ETAV-RIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEP---- 175
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S+ P+ +K L G+ + AG HS + +G V+ +G ++ +
Sbjct: 176 ----SKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAV 231
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I K S++VV CG HT LT G L+T+G G LG G
Sbjct: 232 PCHI-KFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHG 276
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+ G+LGLG+ E+ R P + H + + CG H + L++ G ++ G N G
Sbjct: 107 WGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSG 166
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + L P + L + +I+ G HS A+++ G ++ WGKN GQLGL
Sbjct: 167 QLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDI 226
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P ++ L + G E + A+T G + ++G G G+LGHG
Sbjct: 227 QDRAVP--CHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGS------- 277
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
+ +E PR + EL G +V G H+ A +G VY FG
Sbjct: 278 --TANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFG 319
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGL ++ R P + ++CG HT LT+ G ++ G +GQ
Sbjct: 213 WGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQ 272
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
LG + L P R+ L EV QI+ G HH+ A G +Y +G NS+GQLG G
Sbjct: 273 LG-HGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVL 331
Query: 161 AAKVIPIPTKVECLSG 176
+A P P K LSG
Sbjct: 332 SADKSPYPLKTSFLSG 347
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 45/171 (26%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE----------------------- 234
+L WG G+LG G E + + R+ + +T R +KE
Sbjct: 1 MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSN 60
Query: 235 -------------------LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQE 274
L+ K+ + + G HS ++E G+V+ +G ++ L
Sbjct: 61 SCGQLGHNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTT 120
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R P LI +L +V+CG H L+ G+L+TWG N +G LG+G
Sbjct: 121 ETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLG 171
>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Takifugu rubripes]
Length = 726
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 159/326 (48%), Gaps = 35/326 (10%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++LK D+ L G + + R F ++G+ ++G+LGLGS + +P A +
Sbjct: 29 SKFWLKNDVPLKIACGDEHTALITKNGRLF--MFGSNNWGQLGLGSKRTVNKPTCVKALK 86
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKK--E 124
+ +ACG HTL T G V+++G N GQLG+ E + RI
Sbjct: 87 TEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQ----RIHAFDSLGP 142
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V ++ G + S+A+T G+L+MWG N+ GQ+GL K++ P P +V+ I +
Sbjct: 143 VKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESH--APSPQEVDVGGPI--SWVSC 198
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G+ S VT G + ++G SG+LG E + P+++K ++ ++A
Sbjct: 199 GYYHSAFVTADGALYTFGECDSGKLGLTTE-------QLPRHRVPQMVKSIKEPVTQVAC 251
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYSE--EVVCGG 297
G H+ + E R++ FG ++ +F+ +R P + +V CG
Sbjct: 252 GGG-HTVALTEE-RLFTFGLGQFGQLGHGTFIFE----SRLPRPVEHFKKGRVCQVACGE 305
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
HT V+T GG LYT+G +G LG+G
Sbjct: 306 NHTAVITDGGLLYTFGDGRHGKLGLG 331
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 12/209 (5%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ G++GL P + ++CG H+ F+T G +Y G D G
Sbjct: 164 MWGDNTEGQIGLAKESHAPSPQEVDV--GGPISWVSCGYYHSAFVTADGALYTFGECDSG 221
Query: 102 QLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG++ E + P + +K+ V Q++ G H+ A+T + L+ +G GQLG G
Sbjct: 222 KLGLTTEQLPRHRVPQMVKSIKEPVTQVACGGGHTVALTEE-RLFTFGLGQFGQLGHGTF 280
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P VE Q A G + +T GG + ++G G G+LG G+E+
Sbjct: 281 IFESR-LPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTFGDGRHGKLGLGEEN----- 334
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
T+++ P + V+ A G H
Sbjct: 335 --FTNQFKPTVCSRFLKYGVQAATCGGCH 361
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + ++++P VCS F K+ ++A CGG H + L
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATCGGCHMVVL 365
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats.
Identities = 69/225 (30%), Positives = 120/225 (53%), Gaps = 27/225 (12%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+ + PL+ +K+ +++S G+ H + IT DGELY WG N +GQLG G + K + +P +
Sbjct: 1113 FPMAPLKN---EKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKR 1169
Query: 171 VECLSG---IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
V+ G IF + G E ++AV V SWG+ G+LGHG ++ ++
Sbjct: 1170 VDFFRGKSPIFMVEC--GGEHTIAVDSNYFVYSWGSDKFGQLGHGT--------KAVNQS 1219
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR---P 281
P++I+EL G K++ AAGF H+ + ++G ++ FG ++ F N R
Sbjct: 1220 RPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEIN 1279
Query: 282 SLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+++ L + + ++ CG H+ + + GE+Y+WG + G LG
Sbjct: 1280 AIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLG 1324
Score = 107 bits (268), Expect = 6e-21, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 5/256 (1%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGL--KKEV 125
EK ++K ++CG H +T+ G +Y G N GQLG + +L P R+ K +
Sbjct: 1121 EKKAIK-VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPI 1179
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ G H+ A+ + +Y WG + GQLG G KA P +E L+G + A G
Sbjct: 1180 FMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQ-SRPKVIEELTGQKIQAIAAG 1238
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G++ S+G G G+LG G S R ++ +G K+ A
Sbjct: 1239 FAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIAC 1298
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
GF HS ENG VY +G ++ + + +P LI L ++ CG +HT T
Sbjct: 1299 GFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGVTKISCGHFHTVATTD 1358
Query: 306 GGELYTWGSNENGCLG 321
+Y+WGS E+ LG
Sbjct: 1359 LKNVYSWGSGEHMKLG 1374
Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 55/325 (16%)
Query: 39 FAALWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
F WG+ +G+LG G+ ++ RP V ++A+A G AH + L ++G +++ G
Sbjct: 1197 FVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGY 1256
Query: 98 NDFGQLGI----SENIGYSLEPLRI-SGLKK----EVVQISTGYHHSSAITVDGELYMWG 148
DFGQLG S+NI +E I GL+ ++ QI+ G+ HS + +GE+Y WG
Sbjct: 1257 GDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWG 1316
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
GQLG K + I P +E L G+ + + G +VA T V SWG+G +
Sbjct: 1317 LGKQGQLG--HKVFENISKPRLIETLRGV--TKISCGHFHTVATTDLKNVYSWGSGEHMK 1372
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI--------------D 254
LGH + E P+++ V G H+ I D
Sbjct: 1373 LGHSSDKD---------ESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDED 1423
Query: 255 E---NGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---------EVVCGGY 298
E NG+ +Y +G K+ G + P +P + ++ CG
Sbjct: 1424 EENMNGKSSSPIYAWGSAEHGKLGL--GGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSD 1481
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
+ ++TS +Y WG G +G G
Sbjct: 1482 FSAMITSNNAIYVWGCGRFGQIGNG 1506
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG E+ +P + + ++CG HT+ T+ VY+ G + +
Sbjct: 1315 WGLGKQGQLGHKVFENISKPRLIETLR--GVTKISCGHFHTVATTDLKNVYSWGSGEHMK 1372
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL------------------ 144
LG S + S+ + ++K V ++ G +H+ IT +L
Sbjct: 1373 LGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSS 1432
Query: 145 ---YMWGKNSNGQLGLGKKAAKVI---PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
Y WG +G+LGLG PIPT ++ ++ + + G + S +T +
Sbjct: 1433 SPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAMITSNNAI 1492
Query: 199 LSWGAGGSGRLGHGQESSI 217
WG G G++G+G+ +
Sbjct: 1493 YVWGCGRFGQIGNGKNDDV 1511
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 28/155 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT--------------- 87
WG+G++ +LG S + P V F + ++ + CG HT+ +T
Sbjct: 1365 WGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDE 1424
Query: 88 ------ETGCVYATGLNDFGQLGISENIGYSLE----PLRISGLKK-EVVQISTGYHHSS 136
+ +YA G + G+LG+ ++ P I G+ ++ IS G S+
Sbjct: 1425 ENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSA 1484
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
IT + +Y+WG GQ+G GK + +PT++
Sbjct: 1485 MITSNNAIYVWGCGRFGQIGNGKNDD--VWVPTRI 1517
Score = 44.3 bits (103), Expect = 0.084, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG H V+T GELYTWGSN++G LG G
Sbjct: 1126 KVSCGWDHIAVITDDGELYTWGSNQSGQLGHG 1157
>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 734
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 141/283 (49%), Gaps = 22/283 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LG G+L R RPV + + A++ G H+L L G V+A G N +GQ
Sbjct: 458 WGVNEHGQLGDGTLTDRTRPVQVAGLS--GVSAVSAGSYHSLALRSNGTVWAWGFNRYGQ 515
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N L+P++++GL VV ++ G HS A+ DG ++ WG N +GQ+G G +
Sbjct: 516 LGDGTNTD-RLQPVQVAGLSG-VVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSW 573
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P V+ + + G S+A+ G V +WG GSG+LG G +
Sbjct: 574 RFLP----VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGSTA------- 622
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
++ P + L GV V + + + HS + +G V+ +G D L +G+ R
Sbjct: 623 -INKPAPVQVAGLSGV-VSLGSGNY-HSLGLRSDGTVWAWGFN-FDGQL-GDGSLLNRST 677
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S L VV G YH+ S G ++ WG N G LG G
Sbjct: 678 PVRVSGLSGVVSVVAGDYHSLARRSDGTVWAWGYNGEGQLGDG 720
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 21/256 (8%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ S LA G H++ + G V+A G N GQLG + S P+R++ L VV ++
Sbjct: 35 RSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVD-SPTPVRVTNLSG-VVSVA 92
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+G +HS ++ DG ++ WG N+ GQLG G +A P+P +V+ LSG+ + + GF
Sbjct: 93 SGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASAS--PVPVRVQNLSGVVSLGS--GFSHG 148
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G V +WG + LG + +T P + L GV + + A G+ +
Sbjct: 149 LALRSDGTVWAWGD---------NRYNQLGNVGATRSNLPVQVPGLSGV-IAVVAGGY-Y 197
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGG 307
S + +G V+ +GD ++ +G +R P + L + G +HT L S G
Sbjct: 198 SLALRSDGTVWAWGDNRYGQL--GDGTTTQRAVPVQVLNLSGVMNLSAGSFHTVALRSDG 255
Query: 308 ELYTWGSNENGCLGIG 323
++ WG N G LG G
Sbjct: 256 SVWAWGFNAYGQLGDG 271
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 135/291 (46%), Gaps = 41/291 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ R PV + L+ G HT+ L G V+A G N +GQ
Sbjct: 210 WGDNRYGQLGDGTTTQRAVPV--QVLNLSGVMNLSAGSFHTVALRSDGSVWAWGFNAYGQ 267
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +P+++ GL +V+ + G +HS A+ DG ++ WG N QLG G +
Sbjct: 268 LGDGTTT-SRFQPVQV-GL-SDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTS 324
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+ + LSG T A G++ S+ + G V SWG G+LG G
Sbjct: 325 SRVPVQSG---LSGGVTLVA--GYKHSLVLRSDGTVWSWGDNVFGQLGDG---------- 369
Query: 223 STSEYTPRLIKELEGVKVKI-------AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ PR VKV ++G LHS +D NG V+ +GD ++ G
Sbjct: 370 ---TFNPR----SSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQL----G 418
Query: 276 NHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N SL++ L S V G HT VL + ++ WG NE+G LG G
Sbjct: 419 NGTGLDSLVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDG 469
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 25/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ + PV + +L G +H L L G V+A G N + Q
Sbjct: 110 WGDNTAGQLGNGTASAS--PVPVRVQNLSGVVSLGSGFSHGLALRSDGTVWAWGDNRYNQ 167
Query: 103 LGISENIGYSLE--PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N+G + P+++ GL + ++ GY +S A+ DG ++ WG N GQLG G
Sbjct: 168 LG---NVGATRSNLPVQVPGLSGVIAVVAGGY-YSLALRSDGTVWAWGDNRYGQLGDGTT 223
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P+ +V LSG+ A G +VA+ G V +WG G+LG G
Sbjct: 224 TQRAVPV--QVLNLSGVMNLSA--GSFHTVALRSDGSVWAWGFNAYGQLGDGT------- 272
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+TS + P + + V AG HS + +G V+ +GD ++ +R
Sbjct: 273 --TTSRFQPVQVGLSD---VLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRV 327
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + S L +V G H+ VL S G +++WG N G LG G
Sbjct: 328 P-VQSGLSGGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDG 369
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 126/281 (44%), Gaps = 20/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+L PV + + ++A G H+L L+ G V+A G N GQ
Sbjct: 60 WGFNRQGQLGDGTLVDSPTPVRVTNLS--GVVSVASGDYHSLGLSSDGTVWAWGDNTAGQ 117
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+R+ L VV + +G+ H A+ DG ++ WG N Q LG A
Sbjct: 118 LG-NGTASASPVPVRVQNLSG-VVSLGSGFSHGLALRSDGTVWAWGDNRYNQ--LGNVGA 173
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P +V LSG+ A G S+A+ G V +WG G+LG G
Sbjct: 174 TRSNLPVQVPGLSGVIAVVA--GGYYSLALRSDGTVWAWGDNRYGQLGDGT--------- 222
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P + L G V +AG H+ + +G V+ +G A ++ +P
Sbjct: 223 TTQRAVPVQVLNLSG--VMNLSAGSFHTVALRSDGSVWAWGFNAYGQLGDGTTTSRFQPV 280
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L +V G YH+ + S G ++ WG N LG G
Sbjct: 281 QVG-LSDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDG 320
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 25/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ R V ++ ++ G H++ L G V+A G N GQ
Sbjct: 358 WGDNVFGQLGDGTFNPR-SSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQ 416
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + P+ + G V +S G+ H+ + D ++ WG N +GQLG G
Sbjct: 417 LGNGTGLDSLVAAPVGLGG----SVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLT 472
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ +V LSG+ A G S+A+ G V +WG G+LG G
Sbjct: 473 DRTRPV--QVAGLSGVSAVSA--GSYHSLALRSNGTVWAWGFNRYGQLGDGTN------- 521
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
T P + L GV AAG HS + +G V+ +G ++ +G+++ R
Sbjct: 522 --TDRLQPVQVAGLSGVVA--VAAGDSHSLALRSDGTVWAWGYNFDGQI--GDGSYSWRF 575
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V GGYH+ L S G ++TWG N +G LG G
Sbjct: 576 LPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDG 619
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 34/288 (11%)
Query: 43 WGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG +G+ S PV + A+ GG ++L L G V+A G N +G
Sbjct: 160 WGDNRYNQLGNVGATRSN-LPVQVPGLS--GVIAVVAGGYYSLALRSDGTVWAWGDNRYG 216
Query: 102 QLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + ++ L +SG V+ +S G H+ A+ DG ++ WG N+ GQLG G
Sbjct: 217 QLGDGTTTQRAVPVQVLNLSG----VMNLSAGSFHTVALRSDGSVWAWGFNAYGQLGDGT 272
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ LS + T A G S+AV G V +WG +LG G
Sbjct: 273 TTSRFQPVQVG---LSDVLTLVA--GNYHSLAVRSDGAVWAWGDNRYRQLGDGT------ 321
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+TS P GV + AG+ HS + +G V+ +GD ++ +G
Sbjct: 322 ---TTSSRVPVQSGLSGGVTL---VAGYKHSLVLRSDGTVWSWGDNVFGQL--GDGTFNP 373
Query: 280 RPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S + K+ + +V G H+ VL S G ++ WG N +G LG G
Sbjct: 374 RSSAV-KVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNG 420
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
G + +++ G +HS + DG ++ WG N GQLG G P P +V LSG+ +
Sbjct: 33 GGRSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDS--PTPVRVTNLSGVVS 90
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G S+ ++ G V +WG +G+LG+G S+ P ++ L GV
Sbjct: 91 --VASGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASA---------SPVPVRVQNLSGV- 138
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
V + + GF H + +G V+ +GD +++ + P + L VV GGY+
Sbjct: 139 VSLGS-GFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNLPVQVPGLSGVIAVVAGGYY 197
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L S G ++ WG N G LG G
Sbjct: 198 SLALRSDGTVWAWGDNRYGQLGDG 221
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G++G GS R+ PV + +++ GG H+L L G V+ G N GQ
Sbjct: 558 WGYNFDGQIGDGSYSWRFLPV--QVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQ 615
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P++++GL VV + +G +HS + DG ++ WG N +GQLG G
Sbjct: 616 LGDGSTAINKPAPVQVAGLSG-VVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLN 674
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P+ +V LSG+ + A G S+A G V +WG G G+LG G + L
Sbjct: 675 RSTPV--RVSGLSGVVSVVA--GDYHSLARRSDGTVWAWGYNGEGQLGDGTRNDTL 726
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS +P + +L G H+L L G V+A G N GQ
Sbjct: 608 WGYNGSGQLGDGSTAIN-KPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQ 666
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+R+SGL VV + G +HS A DG ++ WG N GQLG G +
Sbjct: 667 LGDGSLLNRS-TPVRVSGLSG-VVSVVAGDYHSLARRSDGTVWAWGYNGEGQLGDGTRND 724
Query: 163 KVIPI 167
++P+
Sbjct: 725 TLVPV 729
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 139/284 (48%), Gaps = 17/284 (5%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG LE P +F + +ACG HTLF+ + G V + G ND+
Sbjct: 14 WGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDY 73
Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P I L ++ V+Q S+G HS+ +T G+++ WG N + QLG G+
Sbjct: 74 GQLGHEKPCK---RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQ 130
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP V L+ Q A G +V +T G++ +WG+ HGQ LG
Sbjct: 131 VDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSN-----NHGQ----LG 181
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T + P+ + + G+ + AAG H+ + +G ++ +G + ++ +
Sbjct: 182 LANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRG 241
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L + CG H+ LT G ++T+G+ G LG
Sbjct: 242 APTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLG 285
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ + +LG G ++S P + H + +ACG AHT+ LT TG +Y G N+
Sbjct: 118 WGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNH 177
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG++ + EP +S + +V+++ G H+ +T+ G L+ WG NS GQLG+G
Sbjct: 178 GQLGLANKTPQN-EPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGD 236
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ PT V+ L A G + S+A+T G V ++GAG G+LGH
Sbjct: 237 DQDR--GAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNT------ 288
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
S +E PR + EL G V A G HS A + +GRVY+FG
Sbjct: 289 ---SNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFG 330
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 135/285 (47%), Gaps = 18/285 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG + RP + + + ++ + G H+ LT+ G V+ G N+ QL
Sbjct: 69 GNNDYGQLG--HEKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQL 126
Query: 104 GISENIGYSLE-PLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G + S P + GL +VVQ++ G H+ +T G++Y WG N++GQLGL K
Sbjct: 127 GRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKT 186
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P V C+SG+ + A G + ++ +T G + +WG G+LG G +
Sbjct: 187 PQ--NEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQD----- 239
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P L+K L + A G HS + +G V+ FG ++ N+ P
Sbjct: 240 ----RGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLP 295
Query: 282 SLISKLPYSE--EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG H+ + S G +Y +G NG LG G
Sbjct: 296 RKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTG 340
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 91/203 (44%), Gaps = 15/203 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
EVV I+ G H+ + DG + G N GQLG K + P ++ L QA+
Sbjct: 45 EVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCKR----PALIDSLGERNVLQAS 100
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + S +T G+V +WG+ +LG GQ + S S PR+++ L KV
Sbjct: 101 SGTKHSTVLTDAGQVFTWGSNEDNQLGRGQ-------VDSASTSIPRMVRGLADHKVVQV 153
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP---SLISKLPYSEEVVCGGYHT 300
A G H+ + G++Y +G ++ P S IS LP V G H
Sbjct: 154 ACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVR-VAAGADHN 212
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
VLT G L+ WG N G LG+G
Sbjct: 213 LVLTISGALFAWGCNSFGQLGVG 235
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG ++GQLGLG + + +P ++ + A G + ++ V G+VLS G
Sbjct: 14 WGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDY 73
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + P LI L V A++G HS + + G+V+ +G
Sbjct: 74 GQLGHEKPCK-----------RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNE 122
Query: 267 VDKMLFQEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+++ + + A P ++ L + +V CG HT LT+ G++YTWGSN +G LG+
Sbjct: 123 DNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGL 182
Query: 323 G 323
Sbjct: 183 A 183
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG+G + R P + + ALACG H+L LT G V+ G +GQ
Sbjct: 224 WGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQ 283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + L P ++ L V QI+ G HS A + G +Y++G NGQLG G
Sbjct: 284 LGHNTS-NNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGST 342
Query: 161 AAKVIPIPTK 170
++ P K
Sbjct: 343 VNRMSPAMVK 352
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
VL WG+ G+LG LG L + PR I+ V+V A G H+ + ++G
Sbjct: 11 VLCWGSLTHGQLG-------LGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDG 63
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
RV G+ ++ ++ +RP+LI L + G H+ VLT G+++TWGSN
Sbjct: 64 RVLSCGNNDYGQLGHEKP--CKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSN 121
Query: 316 ENGCLGIG 323
E+ LG G
Sbjct: 122 EDNQLGRG 129
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 23/281 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LG G +S P + +L+ G G H + +T G VY+ G N +
Sbjct: 44 VMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + +L P ++S + K+ + ++ G HHS +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162
Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP KV CL A G S+AV G+V +WG G+G+LG G
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG----- 215
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP I L+G++V+ G+ H+ + + G +Y +G + ++ GN
Sbjct: 216 ----SSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQL--GTGNK 269
Query: 278 ARRPSLISKLPYSEEVV----CGGYHTCVLTS-GGELYTWG 313
+ + + + E +V C HT S G++Y WG
Sbjct: 270 SNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 116/253 (45%), Gaps = 22/253 (8%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+LT+ V+ G N G LG + +EP RI L K +V +S G H
Sbjct: 29 AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI-IEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
+T DGE+Y WG N+ QLG G + P + + K+A A G S+ +T
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAISVACGSHHSMVLT 143
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
G+V +WG SG++G G + ++ PR + L+ V A G + S
Sbjct: 144 CDGEVYAWGYNNSGQVGSG---------STANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ +NG VY +G ++ + P I+ L E+VVCG HT LT G +Y
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254
Query: 311 TWGSNENGCLGIG 323
WG+N G LG G
Sbjct: 255 AWGANSYGQLGTG 267
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLGS ++ P +A + ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ K+ +V+I+ + H S+A + G++YMWG+ GQ
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315
Query: 161 AAKVIPIPTKVECLSGIF 178
+ + P T C +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 311
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + G VY++G ++ + P IS L
Sbjct: 175 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P SA + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
Length = 531
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 128/269 (47%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
K+ CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L G+ V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 283 KERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +I+ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G ++ +G ++ + P I+ +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLG 216
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 130/266 (48%), Gaps = 23/266 (8%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P++ + + LA G H L L+ G V++ G D G+LG + Y EP I+
Sbjct: 447 PMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT-YLEEPTMIA 505
Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
K VV I+ G +S+AITVDGELY WG+ + G+LG G + P+ V L
Sbjct: 506 AFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPM--LVTAL 563
Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G+ A G Q++AVT G+V SWG G G+LG G S TP+L+
Sbjct: 564 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 614
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
++L+ + + G S + ++G+VY +G ++ H R P L+ L +
Sbjct: 615 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 674
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNE 316
+V G H LT GE+++WGSN+
Sbjct: 675 VDVAVGSTHCLALTDDGEVHSWGSND 700
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 2842 WGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 2901
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2902 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 2959
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2960 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3016
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3017 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTT 3066
Query: 279 --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3067 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3097
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 119/238 (50%), Gaps = 16/238 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2732 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 2791
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 2792 NGRLGLGLSSG-TIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 2850
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 2851 GH--------FSRMNCD-KPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 2901
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L +V CG T LT G +++WG + G LG G
Sbjct: 2902 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2959
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 134/289 (46%), Gaps = 22/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H + LT G V++ G D
Sbjct: 2788 GEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 2846
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 2847 DGKLGHFSRMNCD-KPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 2905
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2906 DNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 2960
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 2961 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3014
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3015 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3063
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 34/280 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 3868 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 3927
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 3928 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 3985
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3986 -GSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4042
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-----------------VYIF 262
PR ++ L+G KV A G LH C E+GR VY +
Sbjct: 4043 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTW 4095
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
GD ++ N +RP L++ L + V CG HT
Sbjct: 4096 GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4135
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + +AF KH + +ACG ++ +T G +Y G
Sbjct: 482 WGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVH-IACGSTYSAAITVDGELYTWGR 540
Query: 98 NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G+L G SE+ + + GLK V +G + A+T +G+++ WG G+L
Sbjct: 541 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 600
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P VE L + + G + SVA+T G+V +WG G + RLGHG +
Sbjct: 601 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 658
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L+ L+G KV A G H + ++G V+ +G
Sbjct: 659 HV---------RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWG 697
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + + + C L L+ +G VY +L P+ I L
Sbjct: 405 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK-----------STTLAPMLIHSL 453
Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ +GE++ WG G+LG G + PT + +G
Sbjct: 454 SSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT--YLEEPTMIAAFNG-- 509
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S A+T G++ +WG G GRLGHG S + TP L
Sbjct: 510 -KQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGS---------SEDQTTPML 559
Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+ L+G+KV A +G + + ENG+V+ +GD K+ + + P L+ KL
Sbjct: 560 VTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 619
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++YTWG +N LG G
Sbjct: 620 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 655
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G +YA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2770 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRH 2829
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2830 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKAKRIRDIACGSSHSAAITS 2887
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+L+K L G +V A G +
Sbjct: 2888 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 2938
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2939 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2998
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2999 TWGKGDYFRLGHG 3011
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 6/171 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ +A + + +ACG A TL +TE G V++ G D+
Sbjct: 538 WGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 597
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + G L ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 598 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 657
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ + P ++ L G A+G +A+T G+V SWG+ + +L H
Sbjct: 658 --EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGS--NDKLQH 704
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 22/254 (8%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ ++K V +++G
Sbjct: 3797 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 3854
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GE+Y WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 3855 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 3912
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L+ L+G +V A +G +
Sbjct: 3913 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 3963
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
C+ ++ V+ +GD K+ + + P I L +V CG + LT G +
Sbjct: 3964 CLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAV 4023
Query: 310 YTWGSNENGCLGIG 323
YTWG + LG G
Sbjct: 4024 YTWGKGDYHRLGHG 4037
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2724 SAGTIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2781
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GK+ + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 2782 GKIYACGEATNGRLGLGLSSGTIPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 2833
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+
Sbjct: 2834 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYS 2893
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 2894 WGLGEYGRLGHG 2905
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
G +Y WG N GQLG G + AKV +P PT+
Sbjct: 3757 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3815
Query: 171 --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+E + +F ++ A+ G + +A++ G+V SWG G+
Sbjct: 3816 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3875
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSACI +G ++ +G
Sbjct: 3876 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 3926
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 3927 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG 3985
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 592 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 651
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ + P + L+ K+VV ++ G H A+T DGE++ WG N Q L
Sbjct: 652 LGHGTDEHVRF---PKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTL 708
Query: 156 GLGKKAAKVIP 166
KK K +P
Sbjct: 709 FSNKKQPKALP 719
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 4095 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 132/254 (51%), Gaps = 17/254 (6%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
S+K +ACGG H++FL E G VY G N GQLG E G +P +I L + +V ++
Sbjct: 36 SIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLG-HEREGN--KPEQIGALADQHIVHVAC 92
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A++ G+L+ WG S+GQLG + IP ++ L+ Q + G +
Sbjct: 93 GESHSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCM 151
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ G+ +WG G+LG G+E S+ +P+ +K LEG+ + AAG HS
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKE--------FPSQASPQRVKSLEGIPLAQVAAGGAHS 203
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
+ +G V+ +G ++ + + P + KL +++VV CG HT VLT G
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHV-KLLRTQKVVYISCGEEHTAVLTKSG 262
Query: 308 ELYTWGSNENGCLG 321
++T+G+ G LG
Sbjct: 263 GVFTFGAGSFGQLG 276
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 128/267 (47%), Gaps = 14/267 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P A + +ACG +H+L L++ G +++ G GQLG + P I
Sbjct: 75 KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134
Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L ++++ Q+S G H A+ DG+ + WG+N +GQLGLGK+ P +V+ L GI
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-PQRVKSLEGIPL 193
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q A G S A++ G V WG +G+LG E T +P +K L K
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDE---------TDRQSPCHVKLLRTQK 244
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
V + G H+A + ++G V+ FG + ++ N P + +L SE ++ CG
Sbjct: 245 VVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 304
Query: 298 YHT-CVLTSGGELYTWGSNENGCLGIG 323
HT + S G +Y +G G LG G
Sbjct: 305 QHTLAFVPSSGLIYAFGCGARGQLGTG 331
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G N+ G
Sbjct: 162 WGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAG 221
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 222 QLGLSDETDRQ-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSM 280
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 281 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 336
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL R P + ++CG HT LT++G V+ G FGQ
Sbjct: 215 WGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 275 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 333
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 334 CNVKCPSPVK 343
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia stuttgartiensis]
Length = 1413
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 138/282 (48%), Gaps = 25/282 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G++ +R P + + A+A G HT+ L G V+A G N +GQ
Sbjct: 1113 WGSNSYGQLGDGTITNRSIPTPVTYLTN--IIAIAGGYVHTIALKSDGTVWAWGYNGYGQ 1170
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++SGL +V+ I+ Y H+ A+ DG ++ WG N GQLG G
Sbjct: 1171 LGDGSTTNRS-TPVQVSGLT-DVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTN 1228
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V L+ + A G+ ++A+ G V +WG SG+LG G
Sbjct: 1229 RSTPV--QVSGLTDVI--AIAGGYVHTIALKSDGTVWTWGWNNSGQLGDG---------T 1275
Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+ + TP ++ G+ IA A G H+ + + V+ +G + ++ +G R
Sbjct: 1276 TINRLTP---VQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQL--GDGTTINRL 1330
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P +S L + + G YHT L S ++ WGSN G LG
Sbjct: 1331 TPVQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG 1372
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN + G+LG GS R PV S + A+A G AHT+ L G V+A G N+ G+
Sbjct: 217 WGNNEGGQLGDGSTTDRSTPVQVSGLTD--VIAIAGGYAHTIALKSDGTVWAWGDNEGGR 274
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S+ P+++ GL +V+ I+ G H+ A+ DG ++ WG N GQLG G
Sbjct: 275 LGDGSTTNRSI-PVKVGGLS-DVIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTN 332
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ KV L+ + A G+ ++ + G V +WG G+LG G
Sbjct: 333 RSTPV--KVSGLADVI--AIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGS--------- 379
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V A G H+ + +G ++ +G ++ ++ P
Sbjct: 380 TTNRSTPVQVSGLA--DVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPV 437
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + G YHT + S G ++TWG N G LG G
Sbjct: 438 QVNGLTDVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDG 478
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 132/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG S +R PV S + A+A G HT+ L G V+A G N+ GQ
Sbjct: 167 WGANWNGQLGDESTTNRSTPVQVSGLTD--VIAIAGGAYHTIALKSDGTVWAWGNNEGGQ 224
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++SGL +V+ I+ GY H+ A+ DG ++ WG N G+LG G
Sbjct: 225 LGDGSTTDRS-TPVQVSGL-TDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTN 282
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP+ KV LS + A G ++A+ G V +WG G+LG G
Sbjct: 283 RSIPV--KVGGLSDVI--AIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGS--------- 329
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V A G+ H+ + +G V+ +G ++ + P
Sbjct: 330 TTNRSTPVKVSGL--ADVIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPV 387
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + G YHT + S G ++ WG N G LG G
Sbjct: 388 QVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDG 428
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 123/249 (49%), Gaps = 19/249 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G HTL L G V+A G N GQLG I S P+++SGL +V+ I+ G +H+
Sbjct: 1044 ISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRS-TPVQVSGLT-DVIAIAGGDYHT 1101
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ D ++ WG NS GQLG G + IP P V L+ I A G+ ++A+
Sbjct: 1102 IALKSDNTVWAWGSNSYGQLGDGTITNRSIPTP--VTYLTNII--AIAGGYVHTIALKSD 1157
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG-FLHSACID 254
G V +WG G G+LG G +T+ TP + L V IA AG ++H+ +
Sbjct: 1158 GTVWAWGYNGYGQLGDGS---------TTNRSTPVQVSGLTDV---IAIAGEYVHTVALK 1205
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
+G V+ +G ++ + P +S L + G HT L S G ++TWG
Sbjct: 1206 SDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDGTVWTWGW 1265
Query: 315 NENGCLGIG 323
N +G LG G
Sbjct: 1266 NNSGQLGDG 1274
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 129/274 (47%), Gaps = 19/274 (6%)
Query: 50 RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI 109
+LG GS PV S A+A G HT+ L G V+ G N+ GQLG I
Sbjct: 622 QLGDGSTTDSSTPVQVSGLTD--AIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTI 679
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
S P+++ GL +V+ I+ G +H+ A+ DG ++ WG N GQLG G + P+
Sbjct: 680 NRS-TPVQVIGLT-DVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPV-- 735
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+V+ L+ I A G+ S+A+ G V +WG G G+LG G +T TP
Sbjct: 736 QVKGLADII--AIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGS---------TTDHLTP 784
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+ L + A G++H+ + +G V+ +G ++ ++ P +S L
Sbjct: 785 VQVSGL--TDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTD 842
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V YHT L S G ++TWG N G LG G
Sbjct: 843 VIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDG 876
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 120/249 (48%), Gaps = 19/249 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G HTL L G V+ G N GQLG E+ P+++SGL +V+ I+ G +H+
Sbjct: 148 ISAGAYHTLTLKPDGAVWTWGANWNGQLG-DESTTNRSTPVQVSGLT-DVIAIAGGAYHT 205
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N GQLG G + P+ +V L+ + A G+ ++A+
Sbjct: 206 IALKSDGTVWAWGNNEGGQLGDGSTTDRSTPV--QVSGLTDVI--AIAGGYAHTIALKSD 261
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG GRLG G +T+ P + L V A G H+ +
Sbjct: 262 GTVWAWGDNEGGRLGDGS---------TTNRSIPVKVGGLS--DVIAIAGGNAHTIALKS 310
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGS 314
+G V+ +GD ++ + P +S L + GGY HT VL S G ++TWG
Sbjct: 311 DGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLA-DVIAIAGGYSHTIVLRSDGTVWTWGH 369
Query: 315 NENGCLGIG 323
NE G LG G
Sbjct: 370 NEGGQLGDG 378
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 131/277 (47%), Gaps = 23/277 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LG G+ +R PV S + A+A G HT+ L V+A G N +GQLG
Sbjct: 1069 GQLGDGTTINRSTPVQVSGLTD--VIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTI 1126
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
S+ P ++ L ++ I+ GY H+ A+ DG ++ WG N GQLG G + P+
Sbjct: 1127 TNRSI-PTPVTYLTN-IIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPV- 1183
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+V L+ + A + +VA+ G V +WG G G+LG G +T+ T
Sbjct: 1184 -QVSGLTDVI--AIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGS---------TTNRST 1231
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK 286
P + L V A G++H+ + +G V+ +G ++ +G R P +S
Sbjct: 1232 PVQVSGL--TDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQL--GDGTTINRLTPVQVSG 1287
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + + G YHT L S ++ WGSN G LG G
Sbjct: 1288 LTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDG 1324
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 23/281 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ +R PV + A+A G HT+ L G V+ G N +GQ
Sbjct: 665 WGWNNSGQLGDGTTINRSTPVQVIGLTD--VIAIAGGDYHTIALKSDGTVWTWGFNYYGQ 722
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++ GL +++ I+ GY HS A+ DG ++ WG N GQLG G
Sbjct: 723 LGGGATTNRS-TPVQVKGLA-DIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTD 780
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V L+ I A G+ ++A+ G V +WG G+LG G
Sbjct: 781 HLTPV--QVSGLTDII--AIAGGYIHTIALKSDGTVWAWGHNEGGQLGDG---------T 827
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP + L V A H+ + +G V+ +G ++ +G+ R
Sbjct: 828 TTNSSTPVQVSGL--TDVIAVTARLYHTIALKSDGTVWTWGRNIYGQL--GDGSTTERSL 883
Query: 283 LISKLPYSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
+ + ++ + G YHT L S G ++ WG N N LG
Sbjct: 884 PVQVIGLTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLG 924
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 128/281 (45%), Gaps = 25/281 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + GRLG GS +R PV + A+A G AHT+ L G V+A G N+ GQ
Sbjct: 267 WGDNEGGRLGDGSTTNRSIPVKVGGLSD--VIAIAGGNAHTIALKSDGTVWAWGDNEGGQ 324
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++SGL +V+ I+ GY H+ + DG ++ WG N GQLG G
Sbjct: 325 LGDGSTTNRS-TPVKVSGLA-DVIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTN 382
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V L+ + A G ++AV G + +WG G+LG G
Sbjct: 383 RSTPV--QVSGLADVI--AIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDG---------T 429
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----DRAVDKMLFQEGNHA 278
+ + TP + L V A G+ H+ + +G V+ +G + D + A
Sbjct: 430 TINSSTPVQVNGL--TDVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPA 487
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+R SL + V G TCV S L W N NG
Sbjct: 488 QR-SLSGMKSVATPTVTTGSATCVSLSSALLNGW-VNGNGV 526
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 17/248 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G HTL L G V+A G N QLG S P+++SGL + + I+ G +H+
Sbjct: 596 ISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSS-TPVQVSGL-TDAIAIAGGVYHT 653
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N++GQLG G + P+ +V L+ + A G ++A+
Sbjct: 654 IALKSDGTVWTWGWNNSGQLGDGTTINRSTPV--QVIGLTDVI--AIAGGDYHTIALKSD 709
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G +T+ TP +K L + A G++HS +
Sbjct: 710 GTVWTWGFNYYGQLGGGA---------TTNRSTPVQVKGL--ADIIAIAGGYVHSIALKS 758
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G V+ +G ++ P +S L + G HT L S G ++ WG N
Sbjct: 759 DGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHN 818
Query: 316 ENGCLGIG 323
E G LG G
Sbjct: 819 EGGQLGDG 826
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 139/329 (42%), Gaps = 67/329 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG GS PV S + A+A G HT+ L G V+A G N+ GQ
Sbjct: 765 WGYNGYGQLGDGSTTDHLTPVQVSGLTD--IIAIAGGYIHTIALKSDGTVWAWGHNEGGQ 822
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++SGL +V+ ++ +H+ A+ DG ++ WG+N GQLG G
Sbjct: 823 LGDGTTTNSS-TPVQVSGLT-DVIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTE 880
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ +V L+ + A G+ ++A+ G V +WG G+ +LG+ + +R
Sbjct: 881 RSLPV--QVIGLTDVI--AIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPVR 936
Query: 223 S-----TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S S TP +I G ++ + L + +D G+RA F G
Sbjct: 937 SLRYDMNSVTTPAVIT---GSTTCVSLSSVLLNGWVD--------GNRAATTAWFDYGTS 985
Query: 278 --------ARRP----------SLISKLPYS-------------------------EEVV 294
A P +L S P++ ++
Sbjct: 986 SGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQNSRGISYGSETIFLPRSQIS 1045
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G YHT L G ++ G+N NG LG G
Sbjct: 1046 AGAYHTLTLKPDGTVWACGANWNGQLGDG 1074
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QIS G +H+ + DG ++ WG N NGQLG + P+ +V L+ + A G
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPV--QVSGLTDVI--AIAGGA 202
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
++A+ G V +WG G+LG G +T TP + L V A G
Sbjct: 203 YHTIALKSDGTVWAWGNNEGGQLGDGS---------TTDRSTPVQVSGL--TDVIAIAGG 251
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
+ H+ + +G V+ +GD ++ + P + L + G HT L S
Sbjct: 252 YAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIAIAGGNAHTIALKSD 311
Query: 307 GELYTWGSNENGCLGIG 323
G ++ WG NE G LG G
Sbjct: 312 GTVWAWGDNEGGQLGDG 328
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ +R PV S A+A G HT+ L V+A G N +GQ
Sbjct: 1263 WGWNNSGQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDNTVWAWGSNSYGQ 1320
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I L P+++SGL + + I+ G +H+ A+ D ++ WG NS GQLG A
Sbjct: 1321 LGDGTTIN-RLTPVQVSGLT-DAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTAN 1378
Query: 163 KVIPIPTKVECL 174
+ P +CL
Sbjct: 1379 SLTP----AQCL 1386
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 135/304 (44%), Gaps = 35/304 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
WG G+ G+LG G E R P V +A + +A CG HT + E +Y+ G
Sbjct: 44 WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 103
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
DFG+LG N P I L+ + QI+ G H A+TV G ++ WG+N NGQLG
Sbjct: 104 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 162
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LG + +P K++ G+ K A G E + AVT G + WG G G LG G
Sbjct: 163 LGNTEDSL--LPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF--------GDRAVD 268
L P + + G K+ + A G+ H+ + +G +Y + G +
Sbjct: 221 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271
Query: 269 KMLFQEGNHARRPSLISKLPYSEEVV---------CGGYHTCVLTSGGELYTWGSNENGC 319
L A + + IS+ E + GG L + G+LY WG N+ G
Sbjct: 272 DHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQ 331
Query: 320 LGIG 323
+G+G
Sbjct: 332 VGVG 335
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 142/291 (48%), Gaps = 14/291 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P A + + +ACG +H L +T G V++ G N GQ
Sbjct: 101 WGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 160
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ N SL P +I + V I+ G H++A+T DG+LY WG G LGLG +
Sbjct: 161 LGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 219
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILG 219
++ IP KV ++G A G+ ++ V+ G + ++G G+LGHG ++ +
Sbjct: 220 DRL--IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID----ENGRVYIFGDRAVDKMLFQEG 275
L + + T + +E + + GF I +G++Y +G ++ +
Sbjct: 278 KLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDN 337
Query: 276 NHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ P ++VV CG HT LT +++WG +G LG G
Sbjct: 338 EDHCSPVQVN-FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHG 387
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 17/186 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG + R P S+ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 205 WGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQ 264
Query: 103 LGISEN----IGYSLEPLRISGL-KKEVVQI------STGYHHSS----AITVDGELYMW 147
LG + + + LE L+ + + ++E V++ G+ A+ DG+LY W
Sbjct: 265 LGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGW 324
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N GQ+G+G P+ + Q A G+ ++A+T V SWG G SG
Sbjct: 325 GWNKFGQVGVGDNEDHCSPVQVNFPNEQKVV--QVACGWRHTLALTEAKNVFSWGRGTSG 382
Query: 208 RLGHGQ 213
+LGHG+
Sbjct: 383 QLGHGE 388
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ VV IS G HS A+ G + WG+ +GQLG G A+ P+PT L+ F
Sbjct: 19 ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGD--AEDRPVPT---VLTAAFDD- 72
Query: 182 AALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
A G SV + G ++ SWG G GRLGHG S + + P+
Sbjct: 73 -APGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDV---------FNPQP 122
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
I+ L+GV++ A G H + G V+ +G ++ + P I
Sbjct: 123 IQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR 182
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + G HT +T G+LY WG G LG+G
Sbjct: 183 VKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 216
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSL---------------KALACGGAHTLFLTETGCV 92
YG+LG G E P A + ++ + GG L G +
Sbjct: 262 YGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKL 321
Query: 93 YATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
Y G N FGQ+G+ +N + P++++ +++VVQ++ G+ H+ A+T ++ WG+ +
Sbjct: 322 YGWGWNKFGQVGVGDNEDH-CSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGT 380
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
+GQLG G+ + IP G KQ E S AV KV
Sbjct: 381 SGQLGHGEIVDRNIPKMIDALSSDGSACKQ----LESSKAVPMSAKV 423
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 141/285 (49%), Gaps = 25/285 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ R P+ + S+ A++ G H+L L G V+A G N FGQ
Sbjct: 1139 WGDNTFGQLGDGTTTRRAVPLTV--YGLASVVAVSSGAWHSLALLSDGTVWAWGANGFGQ 1196
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P++++GL +VV I +G +H+ A+ DG ++ WG N+ GQLG G +
Sbjct: 1197 LGDGTSTPRT-RPVQVAGLG-DVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAES 1254
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +PT+VE L G+ A G S+A+ G + +WG SG+LG G
Sbjct: 1255 R--SLPTRVEGLEGVVA--VAGGDHYSLALHSDGTLSAWGNNASGQLGDGT--------- 1301
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
T+ Y+ + V AG H+ + +G V+ +GD A ++ +G R
Sbjct: 1302 GTTRYS--RVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQL--GDGASGTRMR 1357
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V G HT + G ++TWG N +G LG+G
Sbjct: 1358 LVPRPVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLG 1402
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 125/289 (43%), Gaps = 29/289 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKH--SLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+LG G+L R P A +H + A+A G H L + E G ++A G N
Sbjct: 883 WGGNASGQLGDGTLTDRALP----AHVEHLSNAVAVAVGETHALAVGEDGALWAWGANGS 938
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG SL P+R+ GL++ V ++ G S A+ DG + WG N +GQLG G
Sbjct: 939 GQLG-DGGTAPSLTPVRVKGLER-VASVAAGRAFSVAVRDDGTAWAWGTNPSGQLGDGTN 996
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ +P +V L GI A G VA++ G V +WG G+LG G S
Sbjct: 997 HAR--SVPNQVTSLKGIRAMSA--GAHHVVALSADGTVWTWGDNTLGQLGDGSSSP---- 1048
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY------IFGDRAVDKMLFQE 274
+ PR + EL GV+ A F + +D R + GD L
Sbjct: 1049 ----TGMWPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPM 1104
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + P V G H V S G + TWG N G LG G
Sbjct: 1105 AVKIEGPKI---RPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDG 1150
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 138/323 (42%), Gaps = 53/323 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG+ + W V + L+ G AHTL + G V A G N GQ
Sbjct: 733 WGYNRFGQLGLGA--AGWSAVPVQVRGIGRVDRLSVGRAHTLMVRADGTVMAWGENGSGQ 790
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P+ + G+ V +++G HS A+ DG ++ WG N+ GQLG G
Sbjct: 791 LGDGTST-HRTGPVSVPGVPC-VRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTP 848
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG---------- 212
+V P VE L G+ A G + SVA+ G V SWG SG+LG G
Sbjct: 849 RV--TPGLVEGLRGVVALAA--GGDASVALRADGSVWSWGGNASGQLGDGTLTDRALPAH 904
Query: 213 -------------------------------QESSILGFLRSTSEYTPRLIKELEGVKVK 241
S LG + TP +K LE +V
Sbjct: 905 VEHLSNAVAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKGLE--RVA 962
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
AAG S + ++G + +G + L NHAR P+ ++ L + G +H
Sbjct: 963 SVAAGRAFSVAVRDDGTAWAWGTNPSGQ-LGDGTNHARSVPNQVTSLKGIRAMSAGAHHV 1021
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L++ G ++TWG N G LG G
Sbjct: 1022 VALSADGTVWTWGDNTLGQLGDG 1044
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 129/263 (49%), Gaps = 21/263 (7%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV +A E + ++ G AH+L L G V+ G N GQLG + P+R++GL
Sbjct: 102 PVRLAALEN--IVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRA-TPMRVAGL 158
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
VV ++ G HS A+ DG ++ WG N +GQLG G + P +V L+G+
Sbjct: 159 DS-VVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGL--TPEQVPGLNGVVALA 215
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KV 240
A GF+ ++AV G V +WG+ GSG+LG G ST +P + EL G+ +V
Sbjct: 216 A--GFDFTLAVLEDGTVRAWGSNGSGQLGDGT---------STQRLSPVKVSELSGITEV 264
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
+ AG H+ + ++G V+ +G A ++ N P + L + V +
Sbjct: 265 R---AGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDS 321
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L G ++ WG+N +G LG G
Sbjct: 322 LALLDTGAVFAWGANGSGQLGDG 344
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P+ + + S+ A+A G H+L L E G V+A G N GQ
Sbjct: 133 WGGNSSGQLGDGTTTDRATPMRVAGLD--SVVAVAAGDFHSLALREDGTVWAWGTNFHGQ 190
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P ++ GL VV ++ G+ + A+ DG + WG N +GQLG G
Sbjct: 191 LGRGHTQ-PGLTPEQVPGLNG-VVALAAGFDFTLAVLEDGTVRAWGSNGSGQLGDGTSTQ 248
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ KV LSGI +A G ++A+ G V +WG+ SG+LG G +
Sbjct: 249 RLSPV--KVSELSGITEVRA--GTYHALALGKDGGVWTWGSNASGQLGDGTWN------- 297
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + LE +VK A+ S + + G V+ +G ++ + P
Sbjct: 298 --DRAVPMQVPGLE--RVKAVASMDSDSLALLDTGAVFAWGANGSGQLGDGDTTDRATPG 353
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L VV G H VL G L+ WG +G LG G
Sbjct: 354 PVPGLNAVASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHG 394
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 125/281 (44%), Gaps = 17/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R RPV + + A+ GG H L + G V+ G N FGQ
Sbjct: 1189 WGANGFGQLGDGTSTPRTRPVQVAGLGD--VVAIGSGGYHALAVCSDGSVWTWGYNAFGQ 1246
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG SL P R+ GL+ VV ++ G H+S A+ DG L WG N++GQLG G
Sbjct: 1247 LGDGTAESRSL-PTRVEGLEG-VVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTT 1304
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ ++V G +VA+ G G V +WG G+LG G + +
Sbjct: 1305 RY----SRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRM---- 1356
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
PR + L V AG H+ + G V+ +G + ++ + + P
Sbjct: 1357 ---RLVPRPVPNLS--SVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPL 1411
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +L V G + + G + +WGS+ G LG+G
Sbjct: 1412 RVRELSDVTVVSGGADFSLAMKRDGTVLSWGSSLYGSLGLG 1452
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G H+L+L+ G V+A G N GQLG +E L P+R++ L+ +V + +G HS
Sbjct: 63 IAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALEN-IVSVVSGDAHS 121
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG NS+GQLG G + P+ +V L + A G S+A+
Sbjct: 122 LALGADGSVWTWGGNSSGQLGDGTTTDRATPM--RVAGLDSVVA--VAAGDFHSLALRED 177
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G L TP + L GV AAGF + + E
Sbjct: 178 GTVWAWGTNFHGQLGRGHTQPGL---------TPEQVPGLNGVVAL--AAGFDFTLAVLE 226
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G V +G ++ P +S+L EV G YH L G ++TWGSN
Sbjct: 227 DGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWGSN 286
Query: 316 ENGCLGIG 323
+G LG G
Sbjct: 287 ASGQLGDG 294
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 131/330 (39%), Gaps = 67/330 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R RPV S+ A+A GG+H L L G V+A G N GQ
Sbjct: 483 WGRNAAGQLGDGTTLDRARPVAVPGLT--SVTAVAAGGSHVLALRSDGSVWAWGYNALGQ 540
Query: 103 LGISENIGYSLEPLRISGLKK--------------------------------------- 123
LG + L P+R+SGL
Sbjct: 541 LGDGTTV-DRLTPVRVSGLGAVVAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQR 599
Query: 124 ----------EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+ +++ G H+ A+ DG ++ WG N GQLG G A + P+ +V
Sbjct: 600 LSPVRVEGLANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPV--QVPG 657
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L GI G S+A+ G G V +WG G G+LG G TS P LI
Sbjct: 658 LQGITAVSG--GRSHSMALQGDGTVRAWGYNGYGQLGDGTL---------TSRVRPALIP 706
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
L G++ + LH + +G + +G ++ + P + + + +
Sbjct: 707 GLTGIQALHPS--HLHVLALHADGTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDRL 764
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT ++ + G + WG N +G LG G
Sbjct: 765 SVGRAHTLMVRADGTVMAWGENGSGQLGDG 794
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G + P + + ALA G TL + E G V A G N GQ
Sbjct: 183 WGTNFHGQLGRGHTQPGLTPEQVPGL--NGVVALAAGFDFTLAVLEDGTVRAWGSNGSGQ 240
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++S L + ++ G +H+ A+ DG ++ WG N++GQLG G
Sbjct: 241 LGDGTST-QRLSPVKVSELSG-ITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWND 298
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ +V L + K A S+A+ G V +WGA GSG+LG G
Sbjct: 299 RAVPM--QVPGLERV--KAVASMDSDSLALLDTGAVFAWGANGSGQLGDGD--------- 345
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L V + G H+ + ++G ++ +G ++ P+
Sbjct: 346 TTDRATPGPVPGLNAVASVV--GGAQHALVLRKDGTLWAWGGGLSGQLGHGGSERHVVPA 403
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +L + G +H+ G ++ WG N G LG G
Sbjct: 404 PVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGDG 444
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 19/284 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R P ++ + ++A++ G H + L+ G V+ G N GQ
Sbjct: 983 WGTNPSGQLGDGTNHARSVPNQVTSLK--GIRAMSAGAHHVVALSADGTVWTWGDNTLGQ 1040
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P ++ L+ V ++ G + A+ +DG WG N GQLG GK
Sbjct: 1041 LGDGSSSPTGMWPRQVPELRG-VEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGP 1099
Query: 163 KVIPIPTKVE---CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ K+E + T +A + +V G V +WG G+LG G
Sbjct: 1100 QLTPMAVKIEGPKIRPPVRTVRAW--GQHAVVQMSDGTVQTWGDNTFGQLGDGT------ 1151
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+T P + L V ++G HS + +G V+ +G ++
Sbjct: 1152 ---TTRRAVPLTVYGL--ASVVAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRT 1206
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP ++ L + GGYH + S G ++TWG N G LG G
Sbjct: 1207 RPVQVAGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDG 1250
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 21/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG G E R VV + + + + ++A G H+L G V+A G N +G
Sbjct: 383 WGGGLSGQLGHGGSE---RHVVPAPVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYG 439
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + +R+ GL V +++ HHS A+ +DG ++ WG+N+ GQLG G
Sbjct: 440 QLG-DGSTAERHAAVRVEGLGG-VRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTL 497
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V L+ + A G +A+ G V +WG G+LG G
Sbjct: 498 DRARPV--AVPGLTSV--TAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGT-------- 545
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP + L G V +AA + S + +G V+ +G+ ++ G P
Sbjct: 546 -TVDRLTPVRVSGL-GAVVAVAAGSYF-SMALQSDGTVWTWGEGFEGQLGDGGGVQRLSP 602
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L V G H + G ++ WG N G LG G
Sbjct: 603 VRVEGLANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDG 644
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ +R R V S+ A+ G HT + G V+ G N GQ
Sbjct: 1339 WGDNAFGQLGDGASGTRMRLVPRPVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQ 1398
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ +N + EPLR+ L +V +S G S A+ DG + WG + G LGLG
Sbjct: 1399 LGLGDNTNRT-EPLRVREL-SDVTVVSGGADFSLAMKRDGTVLSWGSSLYGSLGLGATGH 1456
Query: 163 KVIP 166
+ P
Sbjct: 1457 RSSP 1460
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 93 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 151
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 152 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 209
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 210 PIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------GG 260
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 261 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 318
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 319 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 352
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 47 KWPIFSLCSEEELQLVRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 105
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 106 PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 165
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 166 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 215
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ G + P I+ L
Sbjct: 216 TGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIR 275
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 276 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 309
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 245 VWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 304
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
QLG S P + K +++I+ + H S+A T G +YMWG+
Sbjct: 305 QLGTGNKSNQSY-PTPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 353
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 160/310 (51%), Gaps = 35/310 (11%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW- 60
+ R +T++++Y +K K+ G +T + F+ WG GD G+LG SRW
Sbjct: 3540 VPRQITSLSQYVIK---KVAVHSGGRHSLALTTDGKVFS--WGEGDDGKLGHF---SRWN 3591
Query: 61 --RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI 118
+P + A + ++ +ACG +H+ +T G +Y GL ++G+LG +N L+P ++
Sbjct: 3592 CDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNT-TQLKPKQV 3650
Query: 119 SGLKKE-VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
L E VVQ++ G + A+T +G++Y WG G+LG G ++ +P +V+ L
Sbjct: 3651 KALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRG--GSEGCNVPHEVDRLR 3708
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
Q G + S+A+T G+V +WG G RLGHG ++ + P++++ L
Sbjct: 3709 DQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHV---------RKPQIVEGL 3759
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYS- 290
+G K+ A G LH + ++G+V+ +GD Q+GN R+P+L+ Y
Sbjct: 3760 KGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHG----QQGNGTTTVNRKPALVVLEGYKI 3815
Query: 291 EEVVCGGYHT 300
+V CG H+
Sbjct: 3816 SKVACGSSHS 3825
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 126/274 (45%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + +K LA GG H L L+ G VY+ G + G+LG N
Sbjct: 4532 ESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHG-NRSPCDR 4590
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ KEVV I+ G HS+ IT +GELY WGK G+LG G + P P VE
Sbjct: 4591 PRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQ--PRPKLVEA 4648
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L A G Q++ +T V SWG G G+LG G S P
Sbjct: 4649 LKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG---------SDGCKVPMK 4699
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I+ L+G V G S + ++G VY +G ++ +H RRP +S L +
Sbjct: 4700 IETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNKK 4759
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG H T GE+++WG N+ G LG G
Sbjct: 4760 VIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDG 4793
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 118/245 (48%), Gaps = 13/245 (5%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G H + LT G V++ G D G+LG + + EP I+GL K+V +I G +S A+
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHE-EPALITGLSGKQVAKICCGSSYSVAL 686
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
T +GE+Y WGK + G+LG G + P+ K I G Q++AVT G V
Sbjct: 687 TSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAV 746
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LG G TP++I++L G V G S + ++G
Sbjct: 747 YSWGDGDYGKLGRGGNDGC---------KTPKVIEKLMGQDVVRVYCGNQFSMALTKSGA 797
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
VY +G ++ +HAR P I L + ++ G H +T GELY WG NE
Sbjct: 798 VYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNE 857
Query: 317 NGCLG 321
G LG
Sbjct: 858 QGQLG 862
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 136/288 (47%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG + + P ++ ++ +K +A GG H+L LT G V++ G D
Sbjct: 3522 GEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDD 3581
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG +P I LK K V I+ G HS+AIT +G+LY WG G+LG G
Sbjct: 3582 GKLGHFSRWNCD-KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGD 3640
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P +V+ L+ Q A G Q++A+T GKV SWG G G+LG G
Sbjct: 3641 NTTQLKP--KQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGG---- 3694
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P + L KV G S + ++G+V+ +G ++ H
Sbjct: 3695 -----SEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAH 3749
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G+++ WG N++G G G
Sbjct: 3750 VRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNG 3797
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 120/263 (45%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4572 WGEGEDGKLGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGR 4631
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ P + LK VV ++ +G + IT D ++ WG G+LG G
Sbjct: 4632 LGHGDSEDQP-RPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4689
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L G + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4690 -GSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHV-- 4746
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+ KV A G LH + G V+ +GD ++ N +
Sbjct: 4747 -------RRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAIQ 4799
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG H+
Sbjct: 4800 RPRLVASLLGKKINRVACGSAHS 4822
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 15/220 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G YGRLG G E + RP + A + + + +ACG A TL +T+ V++ G D+
Sbjct: 4624 WGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDY 4683
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G + P++I L+ + V+++ G S A+T G +Y WGK +LG G
Sbjct: 4684 GKLGRGGSDGCKV-PMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHG- 4741
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P KV L A G VA T G+V SWG G+LG G ++I
Sbjct: 4742 -SDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAI-- 4798
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
PRL+ L G K+ A G HS N V
Sbjct: 4799 -------QRPRLVASLLGKKINRVACGSAHSLAWSTNKAV 4831
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 21/273 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD G+LG G ++ P + + + + CG ++++ LT G VY+ G +FG+
Sbjct: 643 WGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGR 702
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
L G SE+ P+ + K +V ++ +G + A+T G +Y WG G+LG
Sbjct: 703 LGHGSSED---QTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGR 759
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G P +E L G + G + S+A+T G V +WG G + RLGHG E
Sbjct: 760 GGNDG--CKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHA 817
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
P+ I+ L KVK A G LH I E+G +Y +G ++ ++
Sbjct: 818 ---------RHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISN 868
Query: 278 ARRPSLISKLPYSEE--VVCGGYHTCVLTSGGE 308
P+LI + V CG T TSGG+
Sbjct: 869 FTEPTLIGGMEGKNIIGVACGPTQTFAWTSGGQ 901
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 115/238 (48%), Gaps = 16/238 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + L L + VQI G +T +G++Y G+ +
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEAT 3525
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG V +P ++ LS K+ A+ G S+A+T GKV SWG G G+L
Sbjct: 3526 NGRLGLGITTGTV-SVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKL 3584
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +V+ A G HSA I NG +Y +G +
Sbjct: 3585 GH--------FSRWNCD-KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGR 3635
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P + L + +V CG T LT G++Y+WG + G LG G
Sbjct: 3636 LGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRG 3693
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 139/294 (47%), Gaps = 30/294 (10%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC----GGAHTLF-LTETGCVYATG 96
WG D +LG G S+ + P + +L AL C GG+ +LF +T+ G VYA G
Sbjct: 3469 WGLNDKDQLG-GPKGSKIKLPTL-----NDNLSALRCVQIVGGSKSLFCVTQEGKVYACG 3522
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNG 153
G+LG+ G P +I+ L + V++ + +G HS A+T DG+++ WG+ +G
Sbjct: 3523 EATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDG 3582
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG + P +E L + A G S A+T G + +WG G GRLGHG
Sbjct: 3583 KLGHFSRWN--CDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGD 3640
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKML 271
+T++ P+ +K L +V A G + + + G+VY +GD K+
Sbjct: 3641 ---------NTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLG 3691
Query: 272 FQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +L + ++ CG + LT G+++TWG + LG G
Sbjct: 3692 RGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHG 3745
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 19/288 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATG--LND 99
WG+ G+LG +PV C A L GG TLF +T G V+ATG
Sbjct: 4466 WGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLV-GGEQTLFAVTAEGKVFATGYGAGG 4524
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G +E++ + + I + + + +++G H A++ +GE+Y WG+ +G+LG G
Sbjct: 4525 RLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGN 4584
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P ++ L G A G S +T G++ +WG G GRLGHG
Sbjct: 4585 RSP--CDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGD------ 4636
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S + P+L++ L+ +V A +G + CI ++ V+ +GD K+ +
Sbjct: 4637 ---SEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4693
Query: 278 ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P I L +V CG + LT G +YTWG + LG G
Sbjct: 4694 CKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHG 4741
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 29/258 (11%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++ +AC L L++ G VY + ++ +L+ L G +EV++I++
Sbjct: 577 VQQIACSERCCLILSKAGKVY---------MLYYTSLSPTLQQLNGFG-DREVIRIASHP 626
Query: 133 H--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
H +T DGE++ WG G+LG G P + LSG + G SV
Sbjct: 627 DGKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNH--EEPALITGLSGKQVAKICCGSSYSV 684
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFL 248
A+T G+V SWG G GRLGHG S + TP L+K +G ++ A +G
Sbjct: 685 ALTSNGEVYSWGKGNFGRLGHGS---------SEDQTTPMLLKFFKGHRIVDVACGSGDA 735
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTS 305
+ + ++G VY +GD K+ + + P +I KL ++VV CG + LT
Sbjct: 736 QTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKL-MGQDVVRVYCGNQFSMALTK 794
Query: 306 GGELYTWGSNENGCLGIG 323
G +YTWG +N LG G
Sbjct: 795 SGAVYTWGKGDNYRLGHG 812
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 10/186 (5%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+ ++ WG N QLG G K +K I +PT + LS + Q G + VT GKV
Sbjct: 3462 IQTNVFCWGLNDKDQLG-GPKGSK-IKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVY 3519
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+ G +GRLG G + + R + + +IK KV + + G HS + +G+V
Sbjct: 3520 ACGEATNGRLGLGITTGTVSVPRQITSLSQYVIK-----KVAVHSGG-RHSLALTTDGKV 3573
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +G+ K+ + +P LI L ++ CG H+ +TS G+LYTWG E
Sbjct: 3574 FSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEY 3633
Query: 318 GCLGIG 323
G LG G
Sbjct: 3634 GRLGHG 3639
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 96/239 (40%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVI------------PI---------------------- 167
G+++ WG N GQLG G AKV PI
Sbjct: 4461 GQIWGWGHNHRGQLG-GVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATG 4519
Query: 168 -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
PT++E + +F K+ A+ G + +A++ G+V SWG G G+
Sbjct: 4520 YGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGK 4579
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I L G +V AAG HSACI NG +Y +G
Sbjct: 4580 LGHGNRSPC---------DRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYG 4630
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + RP L+ L ++ CG T +T +++WG + G LG G
Sbjct: 4631 RLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4689
>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
Length = 994
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 135/299 (45%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 178 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 237
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 238 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 296
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 297 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 354
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 355 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 404
Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + R P L+ E +V CG YH VLT E++TWG NG LG G
Sbjct: 405 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHG 463
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G ESR +P ++ + +ACG + T+ LT +G V + G + +GQ
Sbjct: 348 WGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQ 407
Query: 103 LGISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G L RI+G + V+Q++ G +H + +T E++ WGK +NG+LG G
Sbjct: 408 LGNPNSDGRLPCLVEDRIAG--EHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDI 465
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT+VE L + A G + A+
Sbjct: 466 EDR--KVPTQVEALKDRAVRHIACGANFTAAI 495
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 146 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 202
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 203 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 253
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I L+G+ V + G H+A I G+++ FGD + + P + L
Sbjct: 254 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGL 313
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 314 KTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHG 359
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 868 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 927
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 928 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 985
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 986 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 1042
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 1043 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 1095
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 1096 RPRLVAALQGKKVNRVACGSAHT 1118
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 828 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 886
Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 887 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 944
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 945 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 995
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 996 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1055
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 1056 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 1089
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 762 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 819
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 820 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 877
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 878 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 932
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 933 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 986
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 987 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 1037
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P + A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P +
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKV 63
Query: 121 LK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
L V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 64 LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQ 121
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
Q G + S+A+T G V +W G HGQ+ G +T P L++ LEG
Sbjct: 122 GVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQ----GNGTTTVNRKPTLVQGLEG 177
Query: 238 VKVKIAAAGFLHS 250
K+ A G HS
Sbjct: 178 QKITRVACGSSHS 190
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G ++ +P + H + +ACG A TL LT+ G V++ G DF
Sbjct: 39 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 98
Query: 101 GQLGI--SE--NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-----ELYMWGKNS 151
G+LG SE NI ++E L G V QI G S A+T G ++Y WG N
Sbjct: 99 GKLGRGGSEGCNIPQNIERLNGQG----VCQIECGAQFSLALTKSGVVWTWQVYAWGDND 154
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+GQ G G V PT V+ L G + A G SVA T
Sbjct: 155 HGQQGNG--TTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 757 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 815
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 816 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 875
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 876 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 926
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 927 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 985
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 114 EPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+P I LK K + I+ G HS+A+T GELY WG G+LG G ++ P KV
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV- 63
Query: 173 CLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L G Q A G Q++A+T G V SWG G G+LG G S P+
Sbjct: 64 -LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---------SEGCNIPQ 113
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENG-----RVYIFGDRAVDKMLFQEGNHA----RRP 281
I+ L G V G S + ++G +VY +GD Q+GN R+P
Sbjct: 114 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHG----QQGNGTTTVNRKP 169
Query: 282 SLISKLPYSE--EVVCGGYHTCVLTS 305
+L+ L + V CG H+ T+
Sbjct: 170 TLVQGLEGQKITRVACGSSHSVAWTT 195
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +E L + A G S A+T G++ +WG G GRLGHG +T++
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD---------NTTQL 56
Query: 228 TPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
P+++K L G +V A G + + + G V+ +GD K+ P I
Sbjct: 57 KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE 116
Query: 286 KLPYSE--EVVCGGYHTCVLTSGG-----ELYTWGSNENGCLGIG 323
+L ++ CG + LT G ++Y WG N++G G G
Sbjct: 117 RLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNG 161
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 1026 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 1085
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 1086 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 1120
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+P LI L ++ CG H+ LTS GELYTWG E G LG G
Sbjct: 5 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 50
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 755 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 814
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 815 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 874
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 875 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 929
>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 551
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 129/285 (45%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+ G G+ S PV ++ A+A H+L LT G V A G N FGQ
Sbjct: 60 WGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWGGNSFGQ 119
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG P+R+ + V I+ G HS AIT G ++ WG N+ GQLG G
Sbjct: 120 LGDGTTASSRTPVPVRLP-VGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTT 178
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P+P ++ G A G S+AV G L+WG+ G+LG G
Sbjct: 179 DSSLPVPVRLPV--GTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGT-------- 228
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T TP + +L V AAG +HS + G VY +G + ++ + + P
Sbjct: 229 -TTGSSTPITVPQLP--TVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSDSSTP 285
Query: 282 SLISKLP---YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++P + VV G H+ LT+ G WG N G LG G
Sbjct: 286 IAV-RVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNG 329
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 100/236 (42%), Gaps = 13/236 (5%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
T + A G N FGQ G P+R+ + V I+ HS A+T G + W
Sbjct: 54 TDTILAWGDNSFGQFGNGTTASSRTPVPVRLP-VGTTVTAIAGSDTHSLALTSVGTVLAW 112
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G NS GQLG G A+ P+P ++ G A G S+A+T G V +WG G
Sbjct: 113 GGNSFGQLGDGTTASSRTPVPVRLPV--GTTVTAIAAGTSHSLAITATGAVFAWGDNAVG 170
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G +T P ++ G V A G HS + G +G A
Sbjct: 171 QLGDGT---------TTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAF 221
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + P + +LP V G H+ LTS G +Y WG+N G LG G
Sbjct: 222 GQLGDGTTTGSSTPITVPQLPTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDG 277
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 120/291 (41%), Gaps = 31/291 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ S PV ++ A+A G +H+L +T TG V+A G N GQ
Sbjct: 112 WGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQ 171
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG SL P+R+ + V I+ G HS A+ G WG N+ GQLG G
Sbjct: 172 LGDGTTTDSSLPVPVRLP-VGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTT 230
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
PI V L + A G S+A+T G V +WGA G+LG G S
Sbjct: 231 GSSTPI--TVPQLPTV--TAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTS------ 280
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TP ++ G +G HS + G +GD ++ GN A
Sbjct: 281 ---DSSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQL----GNGA--- 330
Query: 282 SLISKLPYSEEVVCGGY---------HTCVLTSGGELYTWGSNENGCLGIG 323
++ S P + V G H +TS W N G LG G
Sbjct: 331 TVGSSTPVAVRVPGGATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNG 381
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+ D + WG NS GQ G G A+ P+P ++ G A S+A+T
Sbjct: 49 TAAVATD-TILAWGDNSFGQFGNGTTASSRTPVPVRLPV--GTTVTAIAGSDTHSLALTS 105
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G VL+WG G+LG G + S TP ++ G V AAG HS I
Sbjct: 106 VGTVLAWGGNSFGQLGDGTTA---------SSRTPVPVRLPVGTTVTAIAAGTSHSLAIT 156
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGY-HTCVLTSGGELYT 311
G V+ +GD AV ++ + P + +LP V + GG H+ + S G
Sbjct: 157 ATGAVFAWGDNAVGQLGDGTTTDSSLPVPV-RLPVGTTVTAIAGGLGHSLAVASTGATLA 215
Query: 312 WGSNENGCLGIG 323
WGSN G LG G
Sbjct: 216 WGSNAFGQLGDG 227
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 65/151 (43%), Gaps = 4/151 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG GS P+ + A+ G H+L LT G A G N GQ
Sbjct: 266 WGANSFGQLGDGSTSDSSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQ 325
Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG +G S +R+ G + ++ H+ A+T W +N+ GQLG G
Sbjct: 326 LGNGATVGSSTPVAVRVPG-GATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGTTT 384
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
P+ V +G A+G + S+A+
Sbjct: 385 DSSEPV--AVSLPAGTAITAVAVGDDHSLAL 413
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTS-GGELYTWG 313
P ++ K E C HT S GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ + P ++ L
Sbjct: 199 TGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + ++ACG ++ + +TG VY G N G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNG 235
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G P R++ L+ VQ ++ GY H+ +T +G++Y WG NS GQLG G K
Sbjct: 236 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ + P P VE I A S A + GG V WG
Sbjct: 295 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A + G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFCCTDDVF 357
>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60474380|gb|EAL72317.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2044
Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 22/264 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G ++ P + + + + CG HT+ LT+ G VY+ G +++GQ
Sbjct: 828 WGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQ 887
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + +S P+++S L+K V+QI++G H + +T E+ ++G G A
Sbjct: 888 LGLGDVTQHS-SPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN------GAAMGA 940
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A V+ +PT V L + + G + A+T G V +WG G LGHG S
Sbjct: 941 ASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTG--QELGHGGNS------ 992
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+E +P+LI+ L ++ + G H+A + ++GR++ G + ++ G+ +P
Sbjct: 993 ---TETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQ-NKP 1048
Query: 282 SLISKLPYSE--EVVCGGYHTCVL 303
I L + V CG + L
Sbjct: 1049 KRIESLTKTTFISVSCGENYNVAL 1072
Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 111/238 (46%), Gaps = 24/238 (10%)
Query: 86 LTETGCVYATGLNDFGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
LTE G VY G LGI + I L P ++ L +VV +S G+ H +A+
Sbjct: 764 LTENGDVYLWGRGAVKTPAVPILGIPQ-IEDQLLPFKLESLS-DVVSVSIGFCHGAAVRA 821
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+GEL WG NGQLG G ++ P ++ L+ + Q G + ++ +T GKV S
Sbjct: 822 NGELLTWGVGENGQLGHGDTNNQI--EPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYS 879
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WGA G+LG G T +P + LE V A+G H A + + V
Sbjct: 880 WGASEYGQLGLGD---------VTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVL 930
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNE 316
+FG+ A + P+L+ L Y + + CG Y T +T G++YTWG+ +
Sbjct: 931 VFGNGAA----MGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ 984
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 134 HSSAITVDGE--LYMWGKNSNGQLGLGKKAA-KVIPIPTKVECLSGIFTKQAALGFEQSV 190
H SAI +D L WG SN +LG A + P P ++ + + G S
Sbjct: 703 HRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSS 762
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T G V WG G ILG + + P ++ L V V ++ GF H
Sbjct: 763 VLTENGDVYLWGRGAV----KTPAVPILGIPQIEDQLLPFKLESLSDV-VSVSI-GFCHG 816
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
A + NG + +G ++ + N+ P +I L + +V CG HT LT G+
Sbjct: 817 AAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGK 876
Query: 309 LYTWGSNENGCLGIG 323
+Y+WG++E G LG+G
Sbjct: 877 VYSWGASEYGQLGLG 891
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 43/299 (14%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + K CG HTL TE G VYA G N G
Sbjct: 53 MFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 112
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL +
Sbjct: 113 QLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADE 172
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A +P V G + G+ S +TG G++ ++G +G+LG E
Sbjct: 173 ACVSVPCQVDV----GKPVSSISCGYYHSALITGDGELYTFGEPENGKLGLLPEQ----- 223
Query: 221 LRSTSEYTPRLIKELEGV--KVKIAAAGFLHSACIDENGRVYIFG--------------D 264
L++ R+ + + G+ KV A G H+ + E VY FG +
Sbjct: 224 LKNN-----RVPQPVPGIMEKVNKVACGGEHTVVLTETD-VYTFGLGQYGQLGHGTFIFE 277
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V K + H RR + + + CG HT V+ G ++T+G +G LG+G
Sbjct: 278 TSVPKSV----KHLRRHKICN-------ITCGENHTAVVAENGLMFTFGDGRHGKLGLG 325
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 150/293 (51%), Gaps = 24/293 (8%)
Query: 22 SKLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALAC 78
+KL +C R + T + A GN + G+LGLG E R + S F +H +K LA
Sbjct: 84 TKLAVCGRNHTLVYTEKGNVYAAGGNSE-GQLGLGDTEERSTFHLISFFTNQHKIKQLAA 142
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
G + +TE G ++ G N GQ+G+++ S+ P ++ + K V IS GY+HS+ I
Sbjct: 143 GSYTSAAVTEDGQLFVWGDNSEGQIGLADEACVSV-PCQVD-VGKPVSSISCGYYHSALI 200
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGG 196
T DGELY +G+ NG+LGL + K +P V GI K + A G E +V +T
Sbjct: 201 TGDGELYTFGEPENGKLGLLPEQLKNNRVPQPV---PGIMEKVNKVACGGEHTVVLTET- 256
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V ++G G G+LGHG F+ TS P+ +K L K+ G H+A + EN
Sbjct: 257 DVYTFGLGQYGQLGHGT------FIFETS--VPKSVKHLRRHKICNITCGENHTAVVAEN 308
Query: 257 GRVYIFGDRAVDKMLFQEGNHARR--PSLISK-LPYSEEVV-CGGYHTCVLTS 305
G ++ FGD K+ E N+ + P+L L ++ +V CGG H V +
Sbjct: 309 GLMFTFGDGRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACGGCHMLVFAA 361
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 116/239 (48%), Gaps = 20/239 (8%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
L + E+G V+ FG+ +E+I P + + V IS G H++ +T +G+
Sbjct: 1 LCVLESGAVFT-----FGKSRFAEDI-----PSKFWFKNDKPVLISCGDEHTAIVTGNGK 50
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LYM+G N+ GQLGLG K + PT V+ L TK A G ++ T G V + G
Sbjct: 51 LYMFGSNNWGQLGLGSK--NTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGG 108
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG G RST + K+K AAG SA + E+G+++++G
Sbjct: 109 NSEGQLGLGDTEE-----RSTFHLISFFTNQH---KIKQLAAGSYTSAAVTEDGQLFVWG 160
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
D + ++ + P + + CG YH+ ++T GELYT+G ENG LG+
Sbjct: 161 DNSEGQIGLADEACVSVPCQVDVGKPVSSISCGYYHSALITGDGELYTFGEPENGKLGL 219
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 122/265 (46%), Gaps = 28/265 (10%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F+ ++CG HT +T G +Y G N++GQLG+ S +P + LK E +
Sbjct: 27 FKNDKPVLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVS-KPTCVKALKPEKTK 85
Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
++ G +H+ T G +Y G NS GQLGLG + L FT KQ
Sbjct: 86 LAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEER------STFHLISFFTNQHKIKQ 139
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G S AVT G++ WG G++G E+ + P + G V
Sbjct: 140 LAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACV---------SVPCQVD--VGKPVS 188
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPSLISK-LPYSEEVVCGGY 298
+ G+ HSA I +G +Y FG+ K +L ++ + R P + + +V CGG
Sbjct: 189 SISCGYYHSALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNKVACGGE 248
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
HT VLT ++YT+G + G LG G
Sbjct: 249 HTVVLTE-TDVYTFGLGQYGQLGHG 272
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 252 CIDENGRVYIFG-DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
C+ E+G V+ FG R + + + +P LIS CG HT ++T G+LY
Sbjct: 2 CVLESGAVFTFGKSRFAEDIPSKFWFKNDKPVLIS---------CGDEHTAIVTGNGKLY 52
Query: 311 TWGSNENGCLGIG 323
+GSN G LG+G
Sbjct: 53 MFGSNNWGQLGLG 65
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4003 WGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4062
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4063 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4121 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4177
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4178 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4230
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4231 RPRLVAALQGKKVNRVACGSAHT 4253
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3011 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3070
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3071 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3128
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3129 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3185
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3186 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3234
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3235 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3266
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 115/245 (46%), Gaps = 17/245 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 435 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 493
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S+AIT +GELY WG+ + +L G+ A I I K + F Q++A
Sbjct: 494 SAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYE 553
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V SWG G G+LG G S TP+LI++L+ + V G S +
Sbjct: 554 NGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 604
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
++G+VY +G ++ H R P L+ L + +V G H LT E+++W
Sbjct: 605 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 664
Query: 313 GSNEN 317
GSN+
Sbjct: 665 GSNDQ 669
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2957 GEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3016
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3017 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3075
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3076 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3129
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3130 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3184
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3185 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3232
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 120/274 (43%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG
Sbjct: 3963 ESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD-R 4021
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4022 PRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4079
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4080 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4130
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4131 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4190
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4191 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4224
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3897 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3954
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3955 GRLGIGGTESVSSPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4012
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G+ A G S VT G + +WG G GRLGH
Sbjct: 4013 HGSRSP--CDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4067
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4068 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4121
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4122 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4172
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L +V+ + +G H
Sbjct: 2939 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRH 2998
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2999 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3056
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3057 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3107
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3108 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3167
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3168 TWGKGDYFRLGHG 3180
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 119/278 (42%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ GCVY N +L P + GL
Sbjct: 373 PIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYN-----------SDTLAPQLVQGL 421
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 422 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 477
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G RL HG RS
Sbjct: 478 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHG---------RSAMNEIL 525
Query: 230 RLIKELEGVKVKIAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+I L+ K + G F + ENG+V+ +GD K+ + + P LI KL
Sbjct: 526 IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 585
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 586 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 623
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 450 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 508
Query: 98 NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTG--YHHSSAITVDGELYMWGKNSNGQ 154
++ +L + + + ISGL +++ + S G + + A +G+++ WG G+
Sbjct: 509 GNYXRLDHGRSAMNEIL-IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGK 567
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 568 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 625
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 626 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 665
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2893 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2950
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2951 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVK-----KVAVHSGG-RHATALTV 3004
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3005 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3064
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3065 LGEYGRLGHG 3074
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 95/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPI--------------------------------- 167
G +Y WG N GQLG G + AKV +P
Sbjct: 3892 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3950
Query: 168 -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3951 YGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4010
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSAC+ G +Y +G
Sbjct: 4011 LGHGSRSPC---------DRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4061
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4062 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4120
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 560 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 619
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 620 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4161 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4220
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4221 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4255
>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 138/300 (46%), Gaps = 32/300 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 339 WGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNF 398
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ ++ G+L+ +G + G LG G
Sbjct: 399 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHG 457
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K I +P +VE L G+ T QAA G + AV GK+ +WG G
Sbjct: 458 DR--KSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 515
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + +G VY G
Sbjct: 516 GRLGHGDKEAKL---------VPTCVSALVEPNFCQVACGHSLTIARTTSGHVYTMGS-P 565
Query: 267 VDKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V L + + P+ + KL S EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 566 VYGQLGNPQSDGKLPARVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHG 625
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E++ P SA + + +ACG + T+ T +G VY G +GQ
Sbjct: 510 WGDGDKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTIARTTSGHVYTMGSPVYGQ 569
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ G P R+ G + V +I+ G +H + +T E+Y WGK +NG+LG G
Sbjct: 570 LGNPQSDGKL--PARVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDT 627
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K +P+ VE L K A G + A+
Sbjct: 628 DDK--NLPSLVEALKDKQVKSIACGTNFTAAI 657
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + + VT G++ SWG GRLGHG +S +L
Sbjct: 305 LPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-------- 356
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI+ L ++ A G H+ + +G +Y +GD + L GN P +
Sbjct: 357 -HPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 415
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT V++S G+L+T+G G LG G
Sbjct: 416 NGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHG 457
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ + +V CG YHT + + G++ ++G
Sbjct: 281 LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLR-ISGLKKEVVQISTGYHH 134
A G H+L L V + G N GQLG G EP++ + L ++V S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLV--SCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-LKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G E + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ ++ + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
>gi|456861134|gb|EMF79839.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
weilii serovar Topaz str. LT2116]
Length = 506
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 141/301 (46%), Gaps = 37/301 (12%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRTAGNRQPPTLIPGIDDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S+ P+ + GL+ +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANNLNADSFSMNPVAVVGLR-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+N G LG G+ AA+ P+ KVE LSGI KQ A G + +A+ GK+ SWG
Sbjct: 319 RNQYGNLGNGRLSAANAAQSTPV--KVEGLSGI--KQIANGRDHILALASDGKIYSWGLN 374
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG- 263
SG+LG G S TP + L + AG S I ++G V +G
Sbjct: 375 ASGQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGA 426
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCL 320
+ + E N + + ++V+ CG H VL GE+Y WG N G L
Sbjct: 427 NGNTANLAIGETNTQKVYEPNKAVVGIDDVIHFGCGATHNFVLLGNGEIYGWGWNFKGSL 486
Query: 321 G 321
G
Sbjct: 487 G 487
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 124/263 (47%), Gaps = 26/263 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY TG N+FGQLG + G + + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSIRNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIPIPTKVECLSGIFTKQAALG 185
S AI +G +Y WG N+ GQLG+G + A P PT + + A G
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQP-PTLIPGIDDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAA 244
F ++ + G V+++G G+LG+G + L + S P + L V IA
Sbjct: 247 FNHALILKSDGTVVAFGQNNVGQLGNGANN-----LNADSFSMNPVAVVGLRDVIQVIA- 300
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
G HSA + ENG VY++G + N A+ P + L +++ G H
Sbjct: 301 -GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEGLSGIKQIANGRDHI 359
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L S G++Y+WG N +G LGIG
Sbjct: 360 LALASDGKIYSWGLNASGQLGIG 382
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ + P L
Sbjct: 178 RNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQPPTL 233
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
I ++ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 IPGID--DAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANNLNADSFSMNPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 292 LRDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNG 328
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 73/176 (41%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L ++ PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAAQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P+ L + G S +I GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + + P K V + + G + + G G++ WG G LG
Sbjct: 434 AIGETNTQKVYEPNKAVVGIDDVI--HFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487
>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
Length = 1199
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 160/324 (49%), Gaps = 31/324 (9%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 18 SKFWFKNDIPAFLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSTVNKPTCVKALK 75
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
+K ACG HTL TE G VYA+G N+ GQLG+ + + S + ++++ Q+
Sbjct: 76 PEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQL 135
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DGEL+MWG NS GQ+GL K + +P +V G + G+
Sbjct: 136 SAGSNTSAALTEDGELFMWGDNSEGQIGL--KNITNVCVPQQVTV--GKPISWISCGYYH 191
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAG 246
S VT G++ ++G SG+LG ++ + R+ + + G+ K+ A G
Sbjct: 192 SAFVTTEGELYTFGEPESGKLGLPKQLLV----------NHRMPQSVPGIPEKVVQVACG 241
Query: 247 FLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYH 299
H+ + E VY FG + LF+ P +I + + + CG H
Sbjct: 242 GGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFE----TPVPKVIEHIKDLKISSIFCGENH 296
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T ++T G +YT+G +G LG+G
Sbjct: 297 TALITDLGLMYTFGDGRHGKLGLG 320
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + ++ +ACGG HTL
Sbjct: 309 FGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVF 354
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 23/255 (9%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR-ISGLKKEVVQI 128
+ L A+ C L++TG V+ S + ++ L +SG+ V Q+
Sbjct: 79 EERLAAVGCTDDGVTLLSDTGVVFCVD---------SPHPPFTPRSLEALSGIT--VTQV 127
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G H+ ++ DG++Y WG+NS GQLGLGK+ I P V LS + Q + G +
Sbjct: 128 ACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDH 187
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S A++ G V WG G+LG G +T TP L+ L K AA G
Sbjct: 188 SFALSVSGSVFGWGRNDCGQLGLGD---------TTDRETPTLVHYLNMKKTVFAACGKD 238
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSG 306
H+A + +G V+ FG ++ +A P L+++L ++ CG YHT VLT
Sbjct: 239 HTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDH 298
Query: 307 GELYTWGSNENGCLG 321
++Y++G NE+G LG
Sbjct: 299 MKVYSFGCNEHGQLG 313
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG R P + ACG HT LT G V+ G +GQ
Sbjct: 200 WGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQ 259
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P ++ L +V +I+ G +H+ +T ++Y +G N +GQLG ++
Sbjct: 260 LG-HNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREET 318
Query: 162 AKVIPIPTKV 171
+P+P ++
Sbjct: 319 HPCVPLPVQL 328
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 43 WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G+LGLG S P + + ++ GG H+ L+ +G V+ G ND
Sbjct: 146 WGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDC 205
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG+ + L K+ V + G H++ +T+DG ++ +G GQLG
Sbjct: 206 GQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLG--HN 263
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ + P V L G + A G ++ +T KV S+G G+LG +E+
Sbjct: 264 SFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREET 318
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEG-NHARRPSLI 284
+TPR ++ L G+ V A G H+ + ++G+VY +G + ++ L +EG + P +
Sbjct: 111 FTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170
Query: 285 ---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S +P + V GG H+ L+ G ++ WG N+ G LG+G
Sbjct: 171 RSLSSMPVVQ-VSAGGDHSFALSVSGSVFGWGRNDCGQLGLG 211
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 120/255 (47%), Gaps = 16/255 (6%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
E S +A G H+LFLT TG V+A G N GQLG ++ L P R+ L +++V +
Sbjct: 64 EPLSPMRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVL-EDIVSV 122
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+G HS A+ DG ++ WG NS+GQLG G + P +VE + + A G
Sbjct: 123 VSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRA--EPQRVEGFTDVVA--VAAGDFH 178
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S+ + G V +WG G+LG G + L P+ + LEGV AAGF
Sbjct: 179 SLVLKSDGTVWAWGTNFHGQLGQGHTQTGL---------WPKPVPGLEGVVAL--AAGFD 227
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
+ + +G V +G + ++ P I L V G YH L G
Sbjct: 228 FTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIPTLSGITSVAAGTYHAVALGKDGT 287
Query: 309 LYTWGSNENGCLGIG 323
++TWGSN +G LG G
Sbjct: 288 VWTWGSNSSGQLGDG 302
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 131/285 (45%), Gaps = 23/285 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +YG+LG G R P V + ++ + G H + L G + A G N
Sbjct: 1092 WGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNAT 1151
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG S P I G+ + V +STG HS A+ +DG ++ WG N GQLG G
Sbjct: 1152 GQLGDGTTTRRS-SPGEIRGVTR-VTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTT 1209
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ +P+P V+ L + A G SVAV G V +WG G+LG G
Sbjct: 1210 TARAVPVP--VQGLRDVVAIAA--GGYHSVAVRSDGTVWTWGYNTFGQLGDGT------- 1258
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S S P + +LEGV+ G HS + +G V +G A ++ +G+ R
Sbjct: 1259 --SESRALPVQVHKLEGVQA--VTGGDHHSLALHADGTVSGWGHNASGQL--GDGSRTDR 1312
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + + EV G HT L G ++TWG N +G LG G
Sbjct: 1313 YTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDG 1357
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 128/282 (45%), Gaps = 21/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G ++ P E + ALA G TL + G V + G N FGQ
Sbjct: 191 WGTNFHGQLGQGHTQTGLWPKPVPGLE--GVVALAAGFDFTLAVHADGAVSSWGANSFGQ 248
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ L P RI L + ++ G +H+ A+ DG ++ WG NS+GQLG G
Sbjct: 249 LGLG-TFTQRLSPERIPTLSG-ITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWND 306
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P P L G+ +A + S+A+ GG VL+WGA SG+LG G
Sbjct: 307 RAVPAP-----LPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGD-------- 353
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP L+ EL V + G H+ + ++G ++ +G ++ P
Sbjct: 354 -TADRSTPSLVPELSAVTAVV--GGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVP 410
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + L + G +H+ G ++ WG N G LG G
Sbjct: 411 ATVMGLTNVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDG 452
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 134/285 (47%), Gaps = 27/285 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG+ RPV + ++ LA G AH L + G V A G N GQ
Sbjct: 741 WGYNRFGQLGLGAAGWSARPVQVRGIGR--VERLAAGRAHALLVRADGSVVAWGANASGQ 798
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + + G+ +++G HS + DG ++ WG+N GQLG G +A
Sbjct: 799 LGDGGTT-HGARAVTVRGVSC-ARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSA 856
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+V P +VE L GI A G + S+A+ G V +WGA SG++G G L
Sbjct: 857 RV--APGRVEGLEGIVA--VAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRL---- 908
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TPR I+ L V + A G H+ + E+G V+ +G A ++ G+ PS
Sbjct: 909 -----TPRRIEALS--DVMVIALGESHALAVGEDGTVWAWGANASGQL----GDGGETPS 957
Query: 283 LISK----LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L+ L V G + + G + WG+NE+G LG G
Sbjct: 958 LLPARVKGLEGVGSVAAGRAFSLAVRDDGTAWAWGANESGQLGDG 1002
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 127/282 (45%), Gaps = 20/282 (7%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG R P E + ++ G AH+L L G V+ G N G
Sbjct: 90 WGGNSAGQLGGADTSFQRLSPARLPVLED--IVSVVSGDAHSLALGADGTVWTWGSNSSG 147
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + EP R+ G +VV ++ G HS + DG ++ WG N +GQLG G
Sbjct: 148 QLGDGTTTDRA-EPQRVEGF-TDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQ 205
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P P V L G+ A GF+ ++AV G V SWGA G+LG LG
Sbjct: 206 TGLWPKP--VPGLEGVVALAA--GFDFTLAVHADGAVSSWGANSFGQLG-------LGTF 254
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T +P I L G+ AAG H+ + ++G V+ +G + ++ N P
Sbjct: 255 --TQRLSPERIPTLSGITS--VAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVP 310
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + V + L GG++ WG+N +G LG G
Sbjct: 311 APLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDG 352
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G++ R PV S++A+A G H++ + G V+ G N GQ
Sbjct: 441 WGRNSYGQLGDGTVTERHVPVRVPGLP--SVRAVAAAGHHSIAVAMDGTVWTWGRNAAGQ 498
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+ +SGL V+ I+ G H A+ DG+++ WG N+ GQLG G
Sbjct: 499 LGDGTTRDRA-RPVAVSGLTS-VLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGD 556
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K+ P+ +V L+ I + A G S+A+ G V +WG G G+LG G
Sbjct: 557 KLTPV--RVPGLAPI--QSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGG--------- 603
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+P +K L ++ + G H+ + +G V+ +GD ++ +G+ R
Sbjct: 604 GVQRLSPVAVKGLS--DIRNISVGSAHALAVRGDGTVWAWGDN--NEGQLGDGSWMDRFA 659
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V G H+ L + G + WGSN G LG G
Sbjct: 660 PVQVRNLTGITAVSGGRSHSLALHADGTVRAWGSNGYGQLGDG 702
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 146/369 (39%), Gaps = 95/369 (25%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R RPV S S+ A+A GG+H L L G V+A G N GQ
Sbjct: 491 WGRNAAGQLGDGTTRDRARPVAVSGLT--SVLAIAAGGSHVLALRSDGDVWAWGYNALGQ 548
Query: 103 LGISENIGYSLEPLRISGLKK--------------------------------------- 123
LG + G L P+R+ GL
Sbjct: 549 LGDGTS-GDKLTPVRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQR 607
Query: 124 ----------EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
++ IS G H+ A+ DG ++ WG N+ GQLG G + P+ +V
Sbjct: 608 LSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPV--QVRN 665
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL--------------- 218
L+GI G S+A+ G V +WG+ G G+LG G +S +
Sbjct: 666 LTGITAVSG--GRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLSGIQALH 723
Query: 219 -GFLRSTSEYTPRLIK----------------------ELEGV-KVKIAAAGFLHSACID 254
G L + + + ++ ++ G+ +V+ AAG H+ +
Sbjct: 724 PGHLHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQVRGIGRVERLAAGRAHALLVR 783
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
+G V +G A ++ H R + + + V GG H+ VL G ++TWG
Sbjct: 784 ADGSVVAWGANASGQLGDGGTTHGARAVTVRGVSCARSVASGGQHSLVLACDGTVWTWGE 843
Query: 315 NENGCLGIG 323
N+ G LG G
Sbjct: 844 NQRGQLGDG 852
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 130/285 (45%), Gaps = 27/285 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R P F + A+A G H+L L G V+A G N GQ
Sbjct: 141 WGSNSSGQLGDGTTTDRAEPQRVEGFTD--VVAVAAGDFHSLVLKSDGTVWAWGTNFHGQ 198
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P + GL+ VV ++ G+ + A+ DG + WG NS GQLGLG
Sbjct: 199 LG-QGHTQTGLWPKPVPGLEG-VVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQ 256
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P ++ LSGI + A G +VA+ G V +WG+ SG+LG G
Sbjct: 257 RL--SPERIPTLSGITS--VAAGTYHAVALGKDGTVWTWGSNSSGQLGDG---------- 302
Query: 223 STSEYTPRLIK-ELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ R + L GV A A S + E G V +G A + +G+ A R
Sbjct: 303 ---TWNDRAVPAPLPGVGGARAVASLDAGSLALLEGGDVLAWG--ANNSGQLGDGDTADR 357
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
PSL+ +L VV G H L G L+ WG G LG G
Sbjct: 358 STPSLVPELSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHG 402
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 135/287 (47%), Gaps = 26/287 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G P E + ++A G A +L + + G +A G N+ GQ
Sbjct: 941 WGANASGQLGDGGETPSLLPARVKGLE--GVGSVAAGRAFSLAVRDDGTAWAWGANESGQ 998
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N + P R++ +K + +S G HH+ A+ DG ++ WG N+ GQLG G A
Sbjct: 999 LGDGSNQSRRV-PHRVASVKG-LRAVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAF 1056
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V+ P +V LS + + A G + SVAV G SWG+ G+LG G+ L
Sbjct: 1057 TVM-WPQRVAELSDV--ESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRL---- 1109
Query: 223 STSEYTPRLIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+P +K + G K V + A G H+ + +G + +GD A ++ +G
Sbjct: 1110 -----SPAEVK-IGGSKARTVVTVGAWG-QHAVALMADGTLQAWGDNATGQL--GDGTTT 1160
Query: 279 RR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RR P I + V G +H+ L G ++ WG+N G LG G
Sbjct: 1161 RRSSPGEIRGVTRVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDG 1207
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 135/284 (47%), Gaps = 23/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ +R PV + A+A GG H++ + G V+ G N FGQ
Sbjct: 1196 WGANGFGQLGDGTTTARAVPVPVQGLRD--VVAIAAGGYHSVAVRSDGTVWTWGYNTFGQ 1253
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +L P+++ L+ V ++ G HHS A+ DG + WG N++GQLG G +
Sbjct: 1254 LGDGTSESRAL-PVQVHKLEG-VQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTD 1311
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +++ + G+ +A G +VA+ G V +WG G+LG G +
Sbjct: 1312 RYTPV--RLKDVDGLTEVRA--GAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRM---- 1363
Query: 223 STSEYTPRLI-KELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
RL+ K + G+ A AG HS + +G R L N R
Sbjct: 1364 -------RLVPKPVSGLPAATAIGAGAWHSFASGPEEGAFTWG-RNSHGQLGVGDNAPRA 1415
Query: 281 PSLISKLPYSEEVVCGGYHTCV-LTSGGELYTWGSNENGCLGIG 323
KL +V+ GG T + +T G L +WGS+ +G LG+G
Sbjct: 1416 EPQRMKLLSGLKVIAGGADTSLAMTQEGVLMSWGSSLHGTLGLG 1459
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 122/281 (43%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R P +A+A A +L L E G V A G N+ GQ
Sbjct: 291 WGSNSSGQLGDGTWNDRAVPAPLPGVG--GARAVASLDAGSLALLEGGDVLAWGANNSGQ 348
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P + L V + G H+ A+ DG L+ WG GQLG G
Sbjct: 349 LGDGDTADRS-TPSLVPELSA-VTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSER 406
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V+P V L+ + + A G S+A G V +WG G+LG G
Sbjct: 407 HVVP--ATVMGLTNVTSM--ATGSFHSLAALEDGSVWAWGRNSYGQLGDGT--------- 453
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T + P + L V+ +AAAG HS + +G V+ +G A ++ RP
Sbjct: 454 VTERHVPVRVPGLPSVRA-VAAAGH-HSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPV 511
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + GG H L S G+++ WG N G LG G
Sbjct: 512 AVSGLTSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDG 552
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G R R V + A+ G H+ + G N GQ
Sbjct: 1346 WGDNAHGQLGDGVTGPRMRLVPKPVSGLPAATAIGAGAWHSFASGPEEGAFTWGRNSHGQ 1405
Query: 103 LGISENIGYSLEPLR---ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+ +N + EP R +SGLK I+ G S A+T +G L WG + +G LGLG
Sbjct: 1406 LGVGDNAPRA-EPQRMKLLSGLKV----IAGGADTSLAMTQEGVLMSWGSSLHGTLGLGV 1460
Query: 160 KAAKVIP 166
+ P
Sbjct: 1461 LGQRASP 1467
>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
Length = 1302
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 152/293 (51%), Gaps = 24/293 (8%)
Query: 22 SKLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALAC 78
+KL +C R + T A GNG+ G+LGLG E R + S F +H +K LA
Sbjct: 106 TKLAVCGRNHTLVYTENGNMYAAGGNGE-GQLGLGDTEERTTFHLISFFTNQHKIKQLAA 164
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
G + +TE G ++ G N GQ+G+++ S+ P ++ + K + IS GY+HS+ I
Sbjct: 165 GSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSV-PCQVD-VGKPISSISCGYYHSAFI 222
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGG 196
T DGELY +G+ NG+LGL + K +P V GI K + A G E +V +T G
Sbjct: 223 TGDGELYTFGEPENGKLGLLPEQLKNSRVPQPV---LGIMEKVNKVACGGEHTVVLTETG 279
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V ++G G G+LGHG L TS P+ +K L K++ G H+A I EN
Sbjct: 280 -VYTFGLGQYGQLGHGT------LLFKTS--VPKSVKHLRKCKIRNITCGESHTAVIAEN 330
Query: 257 GRVYIFGDRAVDKMLFQEGNHARR--PSLISK-LPYSEEVV-CGGYHTCVLTS 305
G ++ FGD K+ E N A + P+L S L ++ +V CGG H V +
Sbjct: 331 GLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVFAT 383
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 146/296 (49%), Gaps = 37/296 (12%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLGS + +P A + K CG HTL TE G +YA G N G
Sbjct: 75 MFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHTLVYTENGNMYAAGGNGEG 134
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L + + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL
Sbjct: 135 QLGLGDTEERTTFHL--ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLA 192
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K + +P +V+ I + + G+ S +TG G++ ++G +G+LG E
Sbjct: 193 DKT--YVSVPCQVDVGKPISS--ISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ--- 245
Query: 219 GFLRSTSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIF-----GDRAVDKMLF 272
L+++ P L I E KV A G H+ + E G VY F G +LF
Sbjct: 246 --LKNSRVPQPVLGIME----KVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLF 298
Query: 273 QEG-----NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ H R+ + + + CG HT V+ G ++T+G +G LG+G
Sbjct: 299 KTSVPKSVKHLRKCKIRN-------ITCGESHTAVIAENGLMFTFGDGRHGKLGLG 347
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 110/223 (49%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + + V IS G H++ +T +G+LYM+G N GQLGLG
Sbjct: 34 FGKSNFAENI-----PSKFWFRNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGS 88
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + PT V+ L TK A G ++ T G + + G G G+LG G
Sbjct: 89 K--NTVHKPTCVKALKPEKTKLAVCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTT 146
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F S +T + K+K AAG SA + E+G+++++GD + ++ + +
Sbjct: 147 F-HLISFFTNQH-------KIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVS 198
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P + + CG YH+ +T GELYT+G ENG LG+
Sbjct: 199 VPCQVDVGKPISSISCGYYHSAFITGDGELYTFGEPENGKLGL 241
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 30/258 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
++CG HT +T G +Y G ND+GQLG+ S+N + +P + LK E +++ G +
Sbjct: 57 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVH--KPTCVKALKPEKTKLAVCGRN 114
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
H+ T +G +Y G N GQLGLG + T +S FT KQ A G
Sbjct: 115 HTLVYTENGNMYAAGGNGEGQLGLGDTEER-----TTFHLIS-FFTNQHKIKQLAAGSYT 168
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S AVT G++ WG G++G ++ Y + G + + G+
Sbjct: 169 SAAVTEDGQLFVWGDNSEGQIGLADKT-----------YVSVPCQVDVGKPISSISCGYY 217
Query: 249 HSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPS-LISKLPYSEEVVCGGYHTCVLTS 305
HSA I +G +Y FG+ K +L ++ ++R P ++ + +V CGG HT VLT
Sbjct: 218 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTE 277
Query: 306 GGELYTWGSNENGCLGIG 323
G +YT+G + G LG G
Sbjct: 278 TG-VYTFGLGQYGQLGHG 294
>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
Length = 1133
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 621
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 32/269 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++ ++CGG H +T+ G +Y+ G G+LG + + L S + ++ G
Sbjct: 312 DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACG 371
Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
+H+ A+T+ G+LY WG + G LG G + +P +V+ L GI + G
Sbjct: 372 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHW--VPKRVDGPLEGIHVSSISCGPWH 429
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ ++G G G LGHG +S+ PR ++ L+G++ AA G
Sbjct: 430 TALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVW 480
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
H+A + E +G+++ +GD DK G+ R P+ ++ L P +
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQ 538
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS G LG
Sbjct: 539 VACGHCLTVALTTSGHVYTMGSAVYGQLG 567
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G +SR+ P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 506 WGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 565
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G L P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 566 LGNPQADG--LLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGT 623
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K PT VE L + G + A+
Sbjct: 624 DDKN--TPTLVEALKDKQVRSVVCGINFTAAI 653
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 303 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------VSHWVPKR 410
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
+ LEG+ V + G H+A + G+++ FGD + F H R SL +P
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGS-----FGVLGHGDRASL--SVPRE 463
Query: 291 EE---------VVCGGYHTCVLTS------------GGELYTWGSNENGCLGIG 323
E CG +HT + G+++TWG + G LG G
Sbjct: 464 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHG 517
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
Length = 1093
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 621
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 32/269 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++ ++CGG H +T+ G +Y+ G G+LG + + L S + ++ G
Sbjct: 312 DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACG 371
Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
+H+ A+T+ G+LY WG + G LG G + +P +V+ L GI + G
Sbjct: 372 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHW--VPKRVDGPLEGIHVSSISCGPWH 429
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ ++G G G LGHG +S+ PR ++ L+G++ AA G
Sbjct: 430 TALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVW 480
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
H+A + E +G+++ +GD DK G+ R P+ ++ L P +
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQ 538
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS G LG
Sbjct: 539 VACGHCLTVALTTSGHVYTMGSAVYGQLG 567
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G +SR+ P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 506 WGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 565
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G L P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 566 LGNPQADG--LLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGT 623
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K PT VE L + G + A+
Sbjct: 624 DDKN--TPTLVEALKDKQVRSVVCGINFTAAI 653
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 303 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------VSHWVPKR 410
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
+ LEG+ V + G H+A + G+++ FGD + F H R SL +P
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGS-----FGVLGHGDRASL--SVPRE 463
Query: 291 EE---------VVCGGYHTCVLTS------------GGELYTWGSNENGCLGIG 323
E CG +HT + G+++TWG + G LG G
Sbjct: 464 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHG 517
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 1091
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 621
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 32/269 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++ ++CGG H +T+ G +Y+ G G+LG + + L S + ++ G
Sbjct: 312 DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACG 371
Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
+H+ A+T+ G+LY WG + G LG G + +P +V+ L GI + G
Sbjct: 372 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHW--VPKRVDGPLEGIHVSSISCGPWH 429
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ ++G G G LGHG +S+ PR ++ L+G++ AA G
Sbjct: 430 TALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVW 480
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
H+A + E +G+++ +GD DK G+ R P+ ++ L P +
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQ 538
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS G LG
Sbjct: 539 VACGHCLTVALTTSGHVYTMGSAVYGQLG 567
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G +SR+ P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 506 WGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 565
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G L P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 566 LGNPQADG--LLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGT 623
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K PT VE L + G + A+
Sbjct: 624 DDKN--TPTLVEALKDKQVRSVVCGINFTAAI 653
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 303 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------VSHWVPKR 410
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
+ LEG+ V + G H+A + G+++ FGD + F H R SL +P
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGS-----FGVLGHGDRASL--SVPRE 463
Query: 291 EE---------VVCGGYHTCVLTS------------GGELYTWGSNENGCLGIG 323
E CG +HT + G+++TWG + G LG G
Sbjct: 464 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHG 517
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL + G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V + G + S + + G VY++G ++ + P ++ L
Sbjct: 199 TGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 137/294 (46%), Gaps = 33/294 (11%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q A WG+ YG+LG G+ R+ P AL+ HTL L + G V+
Sbjct: 458 QDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATALSATAYHTLALAQDGTVWGW 517
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G ND GQLG + ++ + P + GL V +++G +HS A+ DG ++ WG N+ GQL
Sbjct: 518 GYNDSGQLGDTVDM-VRVTPAPLPGLTG-VTALASGTYHSLALKQDGTVWAWGLNNLGQL 575
Query: 156 GLGKKAAKV--IPIP--TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G G ++ +P+P T V L A S+A+ G V +WG SG+LG
Sbjct: 576 GDGTTVSRTEQMPVPGLTDVTAL--------AASTYHSLALKQDGTVWTWGYNSSGQLGD 627
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +S L TP + L GV AAG +HS + ++G V+ +G R D L
Sbjct: 628 GTTASRL---------TPAQVPGLTGVSA--IAAGLVHSLALKQDGTVWAWG-RNTDGQL 675
Query: 272 FQEGN----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
GN ++ P + L + G YH+ L G ++WG N G LG
Sbjct: 676 ---GNGAAVNSPVPVQVQGLTGVSAIAAGSYHSLALKQDGTAWSWGRNGTGQLG 726
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 132/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG R P + ALA G H+L L + G V+A GLN+ GQ
Sbjct: 517 WGYNDSGQLGDTVDMVRVTPAPLPGLTG--VTALASGTYHSLALKQDGTVWAWGLNNLGQ 574
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + E + + GL +V ++ +HS A+ DG ++ WG NS+GQLG G A+
Sbjct: 575 LGDGTTVSRT-EQMPVPGLT-DVTALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTAS 632
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P +V L+G+ A G S+A+ G V +WG G+LG+G
Sbjct: 633 RLTPA--QVPGLTGV--SAIAAGLVHSLALKQDGTVWAWGRNTDGQLGNG---------A 679
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + P ++ L GV AAG HS + ++G + +G ++ + + P
Sbjct: 680 AVNSPVPVQVQGLTGVSA--IAAGSYHSLALKQDGTAWSWGRNGTGQLGNETITGSLTPV 737
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + G H+ L G ++TWG N G LG G
Sbjct: 738 QVQGLTAVTALAGGDAHSMALLRDGTVWTWGYNAEGELGDG 778
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 21/251 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHH 134
+A GGAH+L + + G A G N +GQLG ++ L P+++ GL +T Y H
Sbjct: 446 IAAGGAHSLVVRQDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATALSATAY-H 504
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+ DG ++ WG N +GQLG +V P P + L+G+ A G S+A+
Sbjct: 505 TLALAQDGTVWGWGYNDSGQLGDTVDMVRVTPAP--LPGLTGV--TALASGTYHSLALKQ 560
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G+LG G S R+ P L V AA HS +
Sbjct: 561 DGTVWAWGLNNLGQLGDGTTVS-----RTEQMPVPGL------TDVTALAASTYHSLALK 609
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
++G V+ +G + ++ +G A R P+ + L + G H+ L G ++ W
Sbjct: 610 QDGTVWTWGYNSSGQL--GDGTTASRLTPAQVPGLTGVSAIAAGLVHSLALKQDGTVWAW 667
Query: 313 GSNENGCLGIG 323
G N +G LG G
Sbjct: 668 GRNTDGQLGNG 678
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 22/226 (9%)
Query: 103 LGISENIGYSLE---PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+S + LE P S + V I+ G HS + DG WG N GQLG G
Sbjct: 420 LGLSASASMILEGGTPCAPS--PRRVTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGT 477
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P P +V+ L+G T +A + ++A+ G V WG SG+LG +
Sbjct: 478 SVDRFLPGPVQVQGLTGA-TALSATAY-HTLALAQDGTVWGWGYNDSGQLGD-----TVD 530
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+R TP + L GV A+G HS + ++G V+ +G + ++ +G
Sbjct: 531 MVR----VTPAPLPGLTGVTAL--ASGTYHSLALKQDGTVWAWGLNNLGQL--GDGTTVS 582
Query: 280 RPS--LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R + L + YH+ L G ++TWG N +G LG G
Sbjct: 583 RTEQMPVPGLTDVTALAASTYHSLALKQDGTVWTWGYNSSGQLGDG 628
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ + PV + A+A G H+L L + G ++ G N GQ
Sbjct: 667 WGRNTDGQLGNGAAVNSPVPVQVQGLTG--VSAIAAGSYHSLALKQDGTAWSWGRNGTGQ 724
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +E I SL P+++ GL V ++ G HS A+ DG ++ WG N+ G+LG G
Sbjct: 725 LG-NETITGSLTPVQVQGLTA-VTALAGGDAHSMALLRDGTVWTWGYNAEGELGDGTTLD 782
Query: 163 KVIPI 167
+ P+
Sbjct: 783 RTAPV 787
>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 954
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 138/297 (46%), Gaps = 36/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
WG GRLG G P + F +++ CG HT +T +G +YA G D
Sbjct: 323 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 382
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG+ + +P+RI G + V IS G H++ +T +G+L+ +G + G LG G
Sbjct: 383 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 441
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
+ + IP +VE L+G T +AA G S AV T GK+ +WG G GRLGH
Sbjct: 442 DRIS--TNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 499
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
G L P + EL+ + A G + + +G+VY G D + D
Sbjct: 500 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHDI 550
Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ R PS I + +EV CG +H VL S E+YTWG NG LG G
Sbjct: 551 V--------RAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHG 599
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 133/280 (47%), Gaps = 42/280 (15%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+GD+ G LGLGS S W+PV + E +KA++CG HT F+T G ++ G
Sbjct: 375 WGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGT 434
Query: 100 FGQLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI-------TVDGELYMWG 148
FG LG IS NI +E L +G + ++ + G HS+A+ T G+L+ WG
Sbjct: 435 FGALGHGDRISTNIPREVEAL--NGCR--TIKAACGVWHSAAVVSVFGEATSSGKLFTWG 490
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFT---KQAALGFEQSVAVTGGGKVLSWGAGG 205
+G+LG G ++IP C++ + T +Q A G +VA++ G+V + G
Sbjct: 491 DGDDGRLGHGDIECRLIP-----SCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTAD 545
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
S I G L + ++E+ A GF H A ++ VY +G
Sbjct: 546 PSHDIVRAPSCIEGGLGKS------FVQEV--------ACGFHHIAVLNSKAEVYTWGKG 591
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
+ ++ + + P+L+ L + +VVCG +T +
Sbjct: 592 SNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
IS G +++ +T G++Y WG+ S G+LG G +P P ++ +G + A G
Sbjct: 304 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHG--VCSYVPHPKLIDEFNGSTVELADCGEF 361
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP-RLIKELEGVKVKIAAAG 246
+ AVT G + +WG G + +LG S + P R++ ++EG+ VK + G
Sbjct: 362 HTCAVTASGDLYAWGDG-------DHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCG 414
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVL- 303
H+A + G+++ FGD + + P + L + + CG +H+ +
Sbjct: 415 PWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 474
Query: 304 ------TSGGELYTWGSNENGCLGIG 323
TS G+L+TWG ++G LG G
Sbjct: 475 SVFGEATSSGKLFTWGDGDDGRLGHG 500
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ + + + G +V VT G++ SWG GRLGHG S +
Sbjct: 289 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPH------- 341
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSL 283
P+LI E G V++A G H+ + +G +Y +GD + L G +H + +
Sbjct: 342 --PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 399
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ Y + + CG +HT +TS G+L+T+G G LG G
Sbjct: 400 LGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 441
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 146/302 (48%), Gaps = 37/302 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN G+LG G +++ P F+ + ++CGG H++ + ++ +Y+ G + +
Sbjct: 1056 WGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRY 1115
Query: 101 GQLG----ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GQLG +N+ P +I ++V+ I+TGY H+ + G+L+ +G N +GQ
Sbjct: 1116 GQLGHGVLTPQNL-----PKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQ 1170
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
LGLG + +P+ + + GI ++ A G S+ G + SWGA G+LGH
Sbjct: 1171 LGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGH 1230
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G +I LR P+ I EL+G + + G H+ I E VY +G + M
Sbjct: 1231 G---NIEKSLR------PKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQG--EHMC 1279
Query: 272 FQEGNHARR--PSLISKLPYS--EEVVCGGYHTCVLTSG------GELYTWGSNENGCLG 321
G++ P +I E+VVCG YHT +T+ G +Y G E+G LG
Sbjct: 1280 LGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLG 1339
Query: 322 IG 323
G
Sbjct: 1340 TG 1341
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 138/306 (45%), Gaps = 42/306 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG G L + P F + A+A G AHT+ L ++G ++ G ND G
Sbjct: 1110 WGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSG 1169
Query: 102 QLGISENIGYSLEPLRISGLK------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
QLG+ N P+RI + + + I+ G+ HS +G++Y WG NS GQL
Sbjct: 1170 QLGLG-NFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQL 1228
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P +++ L G + + G +VA++ V WG G LG+G
Sbjct: 1229 GHGNIEKSLRP--KQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMCLGNGS-- 1284
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI------DENGRVYIFGDRAVDK 269
+ +E +P++I+ K++ G H+A + + G VYI G K
Sbjct: 1285 -------NKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGK 1337
Query: 270 M---------LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNEN 317
+ F + + A PSL S +V G + ++T+ G LYTWG
Sbjct: 1338 LGTGGDLKTPFFDKPHPAVIPSLNSM-----NIVGFSSGSEFSAIITNNGALYTWGYGNF 1392
Query: 318 GCLGIG 323
G +G G
Sbjct: 1393 GQIGNG 1398
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+K+ V ++ G+ H + I+ DGEL+ WG NS GQLG G K P +VE
Sbjct: 1031 EKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIM 1090
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKV 240
+ G E SVAV ++ SWG+ G+LGHG +L T + P+ I++ G KV
Sbjct: 1091 ISCGGEHSVAVDQSFQIYSWGSSRYGQLGHG----VL-----TPQNLPKKIEDFTGGQKV 1141
Query: 241 KIAAAGFLHSACIDENGRVYIFG-------------DRAVDKMLFQE---GNHARRPSLI 284
A G+ H+ + ++G ++ FG +RAV + G H R + I
Sbjct: 1142 LAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAI 1201
Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H+ + G++Y+WG+N G LG G
Sbjct: 1202 A---------AGHSHSIMCLDNGDIYSWGANSKGQLGHG 1231
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 122/255 (47%), Gaps = 13/255 (5%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKK-EVVQISTGY 132
++ACG H ++ G ++ G N GQLG N+G Y P R+ K ++ IS G
Sbjct: 1036 SVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGG 1095
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVA 191
HS A+ ++Y WG + GQLG G + +P K+E +G A A G+ ++
Sbjct: 1096 EHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQ--NLPKKIEDFTGGQKVLAIATGYAHTMV 1153
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLR-STSEYTPRLIKELEGVKVKIAAAGFLHS 250
+ G + ++G SG+LG G + +R TSE I + G ++ AAG HS
Sbjct: 1154 LKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSE-----IVGIHGERITAIAAGHSHS 1208
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+NG +Y +G + ++ + RP I +L ++ CG +HT ++
Sbjct: 1209 IMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNS 1268
Query: 309 LYTWGSNENGCLGIG 323
+Y WG E+ CLG G
Sbjct: 1269 VYCWGQGEHMCLGNG 1283
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 11/185 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G++E RP + + ++CG HT+ ++E VY G +
Sbjct: 1220 WGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQGEHMC 1279
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITV------DGELYMWGKNSNGQL 155
LG N L P I + K++ ++ G +H++ +T G +Y+ G +G+L
Sbjct: 1280 LGNGSNKN-ELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKL 1338
Query: 156 GLG---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G G K P P + L+ + + G E S +T G + +WG G G++G+G
Sbjct: 1339 GTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYGNFGQIGNG 1398
Query: 213 QESSI 217
+ +
Sbjct: 1399 KTEDM 1403
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 11/158 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT------ETGCVYATG 96
WG G++ LG GS ++ P + F ++ + CG HT +T + G VY G
Sbjct: 1272 WGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICG 1331
Query: 97 LNDFGQLGISENIGYSL----EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
+ G+LG ++ P I L +V S+G S+ IT +G LY WG +
Sbjct: 1332 GGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYGN 1391
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
GQ+G GK +P + + Q + GF ++
Sbjct: 1392 FGQIGNGKTEDMWLPTKISLNDQRFMLFNQNSKGFAKA 1429
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L+ + V CG H V++S GEL+TWG+N G LG G
Sbjct: 1025 PPLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHG 1067
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG P A E ++ ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I+ L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ + +V CG YHT + + G++ ++G
Sbjct: 281 LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLR-ISGLKKEVVQISTGYHH 134
A G H+L L V + G N GQLG G EP++ + L ++V S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLV--SCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-LKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G L E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G E + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ ++ + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAPRGELPEPIQALETLNVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEI--------SFTPKKITTLNGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 23/266 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S +P + + ++ +ACG H+ + G +Y GL ++G+
Sbjct: 2700 WGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 2759
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG + I + L + + + VVQ++ G + A+T DG +Y WG G+LG G
Sbjct: 2760 LGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGS 2819
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P+ V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 2820 DGCYTPL--AVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 2874
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L G K+ A G LH + + G+VY +GD Q+GN A
Sbjct: 2875 ------RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGATS 2924
Query: 279 --RRPSLISKLPYS--EEVVCGGYHT 300
R+PSL+ L + V CG H+
Sbjct: 2925 VNRKPSLVHDLEDARVNRVSCGSSHS 2950
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 133/287 (46%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P + +K +A GG H L LT+ G V++ G + G
Sbjct: 2647 GEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2706
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG I +P I LK K + I+ G HS+AI +GELY WG G+LG G
Sbjct: 2707 KLGHGNCISLD-KPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 2765
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P V+ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2766 ITQTRP--KLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG----- 2818
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S YTP + L G+ V G S + + G V+ +G ++ +H
Sbjct: 2819 ----SDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 2874
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+L+ L + V G H +T G++Y WG N++G G G
Sbjct: 2875 RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 2921
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 140/315 (44%), Gaps = 26/315 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
T +Y LG K C +R L NG+ + GS E+++ P+ F
Sbjct: 93 TPFYCDPIAGLGIKQLCCT-------ERSLMILSLNGNAYNMYHGS-ETQY-PLRVHGFS 143
Query: 70 KHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
+ +A G H L LT+ GCVY+ G D G+LG + + Y L S L K +V
Sbjct: 144 DKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVF 203
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
I+ G +S+A++ GELY WG+ + G+LG G + PT V L G A G
Sbjct: 204 IACGSTYSAALSASGELYTWGRGNYGRLGHGN--FDDVLTPTLVTTLKGHTVVHVACGSG 261
Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
Q++ VT G V SWG G G+LG G + TP+++ +L + V
Sbjct: 262 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 312
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
G SA + +G VY +G ++ H R P +I L +++ G H L
Sbjct: 313 GGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILAL 372
Query: 304 TSGGELYTWGSNENG 318
T +Y WG N+ G
Sbjct: 373 TEDQFVYGWGRNDYG 387
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 25/321 (7%)
Query: 13 YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
+L D ++ + +R + Q+ +WG D +LG G S+ + P+ K
Sbjct: 2564 FLASDWEVLQEQVAIQRSTDTPPQQSAVYVWGLNDKDQLG-GLKGSKIKLPIYSEVLSK- 2621
Query: 72 SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
LK + GG+ TLF+ ++ G +YA G G+LG+ ++ EP I L + V++
Sbjct: 2622 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNVCEPKAIPFLSQFVIKKV 2679
Query: 128 -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ +G H+ A+T DG+++ WG+ +G+LG G + + P +E L + A G
Sbjct: 2680 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCIS--LDKPKLIEILKSKRIRDIACGS 2737
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S A+ G++ +WG G GRLGHG + ++ P+L++ L G +V A G
Sbjct: 2738 GHSAAIASNGELYTWGLGEYGRLGHGD---------TITQTRPKLVQALVGQRVVQVACG 2788
Query: 247 F--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCV 302
+ + +G VY +GD K+ + P + +L +V CG +
Sbjct: 2789 SRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLA 2848
Query: 303 LTSGGELYTWGSNENGCLGIG 323
LT GE++TWG + LG G
Sbjct: 2849 LTKYGEVWTWGKGDYFRLGHG 2869
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 116/272 (42%), Gaps = 35/272 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
P C +K L C + L+ G Y N+ + E PLR+
Sbjct: 94 PFYCDPIAGLGIKQLCCTERSLMILSLNGNAY--------------NMYHGSETQYPLRV 139
Query: 119 SGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
G + + + + H A+T DG +Y WG G+LG G + P +E L
Sbjct: 140 HGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVS--YDEPKLIESLL 197
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
A G S A++ G++ +WG G GRLGHG +L TP L+ L
Sbjct: 198 DKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVL---------TPTLVTTL 248
Query: 236 EGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
+G V A +G + C+ +G V+ +GD K+ + ++ P ++ KL
Sbjct: 249 KGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV 308
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CGG + LT+ GE+YTWG + LG G
Sbjct: 309 KVFCGGQFSAALTAHGEVYTWGKGDAYRLGHG 340
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ + P + + + H++ +ACG + TL +T +G V++ G D+
Sbjct: 223 WGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 282
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G + L VV++ G S+A+T GE+Y WGK +LG G +
Sbjct: 283 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSE 342
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +E L K ++G +A+T V W GR +GQ LG
Sbjct: 343 --EHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGW-----GRNDYGQIDPTLGP 395
Query: 221 LRSTSEYTPRL 231
+ S P L
Sbjct: 396 VVSEPTLCPTL 406
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + KV +P E LS + Q A G + AVT GKV S
Sbjct: 3570 GAIYGWGHNHRGQLG-GLEGPKV-KLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYST 3627
Query: 202 G 202
G
Sbjct: 3628 G 3628
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P + + +ACG H+L LT+ G V+A G N+ G
Sbjct: 103 WGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCG 162
Query: 102 QLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G + NI + + + G K+ VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 163 QVGSGATANISTPRKVVSVLGGKR-VVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGN 221
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P KV L+G+ QAA G+ S+A++ G + +WGA G+LG G ++++ G
Sbjct: 222 NVNQ--PSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQLGTGNKANLCG 279
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ I E G + IAA + H SA + + G+VY++G
Sbjct: 280 AAK---------IGESIGRFIDIAATHYAHISAAMTQTGKVYMWG 315
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
+GN LGLG + S P K + ALA G G H + TE G +Y+ G N +
Sbjct: 50 FGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENGEIYSWGHNGYC 109
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + L P RI+G ++ QI+ G HHS +T GE++ WG N+ GQ+G G
Sbjct: 110 QLG-NGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGA 168
Query: 160 KAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A I P K V L G A G S+AV G+V WG G+G+LG G
Sbjct: 169 TAN--ISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLG------ 220
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ ++ +P + L G+ + AA G+ HS + + G +Y +G
Sbjct: 221 ---NNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWG 262
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 122/259 (47%), Gaps = 24/259 (9%)
Query: 76 LAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
LAC G +++T+ V+A G N LG+ + + SL P +I GL KK + ++
Sbjct: 27 LACVFGSAGNEAIYVTKDDEVFAFGNNHNACLGLGD-VMSSLTPRKIEGLCKKGMFALAF 85
Query: 131 GY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G H A T +GE+Y WG N QLG G ++P L Q A G S
Sbjct: 86 GSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGN-LGSCKISQIACGSHHS 144
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR-LIKELEGVKVKIAAAGFL 248
+ +T G+V +WG G++G G ++I TPR ++ L G +V A G
Sbjct: 145 LVLTDRGEVFAWGYNNCGQVGSGATANI---------STPRKVVSVLGGKRVVSIACGQT 195
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--ISKLP--YSEEVVCGGYHTCVLT 304
S + ++G VY +G ++ GN+ +PS +S L + CG H+ L+
Sbjct: 196 SSLAVVDSGEVYGWGYNGNGQLGL--GNNVNQPSPCKVSSLNGLIISQAACGYAHSMALS 253
Query: 305 SGGELYTWGSNENGCLGIG 323
G +YTWG+N G LG G
Sbjct: 254 DEGNIYTWGANSYGQLGTG 272
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P S+ + ACG AH++ L++ G +Y G N +GQ
Sbjct: 209 WGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQ 268
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + + +T Y H S+A+T G++YMWG+ GQ
Sbjct: 269 LGTGNKANLCGAAKIGESIGRFIDIAATHYAHISAAMTQTGKVYMWGQ-CRGQ------- 320
Query: 162 AKVIPIPTKVECLSGIF 178
+ P+ T+ CL +F
Sbjct: 321 SITSPMETRFTCLDDVF 337
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 138/288 (47%), Gaps = 18/288 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E P + +++ ACGG+HTL LT+ G +Y G ND
Sbjct: 6 WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG N + P IS L+ +V Q+S G HS A+T G+L+ WG N+ GQLG
Sbjct: 66 GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL 125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P P ++ ++ Q + G +A+T G++ +WGA G+LG G
Sbjct: 126 DMVSY-PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLG------- 177
Query: 220 FLRSTSEYTP--RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+T + P L+K L G+ + A G HS + ++G ++ +G ++ + +
Sbjct: 178 ---TTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDS 234
Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L + CG + LT G ++T G G LG G
Sbjct: 235 RCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHG 282
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 133/275 (48%), Gaps = 21/275 (7%)
Query: 44 GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG +L ++ RP SA E + + ++CG +H+L LT G +++ G N G
Sbjct: 61 GNNDHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ P I + K VVQIS G+ H A+T GEL+ WG N GQLGLG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
KV P T V+ L+GI A G S AV+ G + WG G+LG
Sbjct: 180 GKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD----- 233
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P +K L + V+ + G S + + G V+ G ++ G H
Sbjct: 234 ----SRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQL--GHGTHGNE 287
Query: 281 --PSLISKLPYSE--EVVCGGYHT-CVLTSGGELY 310
P ++ +L S+ ++ CG HT + S G++Y
Sbjct: 288 ILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 11/183 (6%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
LY WG +G+LGLG + + P +++ +QAA G ++ +T GK+ + G
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + P+ I LE V + G HS + G+++ +G
Sbjct: 63 NDHGQLGHDT--------NNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114
Query: 264 DRAVDKMLFQ-EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
A ++ + P +I + ++ CG H LT+ GEL+ WG+NE G L
Sbjct: 115 SNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQL 174
Query: 321 GIG 323
G+G
Sbjct: 175 GLG 177
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L+SR P ++ ++CG ++FLT+ G V+ GL FGQ
Sbjct: 219 WGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQ 278
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
LG + L + + ++ QI+ G H+ A
Sbjct: 279 LGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFV 315
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 43 WGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +YG+LGLG+ + + + + +ACGG H+ ++++G ++ G N FG
Sbjct: 166 WGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 225
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+++ + P ++ L+ V+ IS G S +T +G ++ G + GQLG G
Sbjct: 226 QLGLND-LDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTH 284
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKV 198
++ +P V L G Q A G + ++A V GKV
Sbjct: 285 GNEI--LPRMVFELMGSKITQIACGRKHTLAFVPSRGKV 321
>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
Length = 1093
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + + +++ +ACG HT +T +G +Y G F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+ G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+A+ + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S + P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 621
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 32/269 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++ ++CGG H +T+ G +Y+ G G+LG + + L S + ++ G
Sbjct: 312 DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACG 371
Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
+H+ A+T+ G+LY WG + G LG G + +P +V+ L GI + G
Sbjct: 372 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHW--VPKRVDGPLEGIHVSSISCGPWH 429
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ ++G G G LGHG +S+ PR ++ L+G++ AA G
Sbjct: 430 TALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVW 480
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
H+A + E +G+++ +GD DK G+ R P+ ++ L P +
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQ 538
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS G LG
Sbjct: 539 VACGHCLTVALTTSGHVYTMGSAVYGQLG 567
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G +SR+ P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 506 WGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 565
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G L P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 566 LGNPQADG--LLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGT 623
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K PT VE L + G + A+
Sbjct: 624 DDKN--TPTLVEALKDKQVRSVVCGINFTAAI 653
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 303 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VAQPKLIDS 359
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------VSHWVPKR 410
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
+ LEG+ V + G H+A + G+++ FGD + F H R SL +P
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGS-----FGVLGHGDRASL--SVPRE 463
Query: 291 EE---------VVCGGYHTCVLTS------------GGELYTWGSNENGCLGIG 323
E CG +HT + G+++TWG + G LG G
Sbjct: 464 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHG 517
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 134/272 (49%), Gaps = 19/272 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP + L+G+ V+ A G+ H+ + + G+VY +G + ++ ++ P+ I
Sbjct: 244 NQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPI 303
Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
S K E C HT T GG +Y WG
Sbjct: 304 SVEKDRIIEIAACHSTHTSAAKTQGGNVYMWG 335
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 16/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H T +
Sbjct: 59 LYTTVNNEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 117
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N+ QLG G ++P LS + A G S+ +T G+V +W
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCYISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 176
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVY 260
G SG++G G + ++ PR + L+ V A G + S + + G VY
Sbjct: 177 GYNNSGQVGSGS---------TANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVY 227
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
++G ++ + P ++ L + + V CG HT VLT G++Y WG+N G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 319 CLGIG 323
LG G
Sbjct: 288 QLGTG 292
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P IS K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T+ C +F
Sbjct: 341 --SVTLPHLTRFSCTDDVF 357
>gi|408500676|ref|YP_006864595.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465500|gb|AFU71029.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1193
Score = 114 bits (285), Expect = 6e-23, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 144/320 (45%), Gaps = 45/320 (14%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL---------ACGGAHTLFLTETG 90
A WG+ YGRLG G+ R PV+ ++ + L + G ++L + G
Sbjct: 696 AYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSAGDYYSLAVGSDG 755
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITV 140
VYA G N +GQLG + + S P+R+ GLK +Q+S G +HS A+
Sbjct: 756 YVYAWGYNSYGQLG-NNSTSSSYVPVRVRDPASPNDASKGLK--AIQVSAGDYHSLALGS 812
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTK-----VECLSGIFTKQAALGFEQSVAVTGG 195
DG Y WG S G+LG +++ +P+ + + G+ Q + G S+AV
Sbjct: 813 DGYAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGLKATQVSAGQNHSLAVGSD 872
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G +WG G G+LG+ SS +R +P +G+K +AG+ HS +
Sbjct: 873 GYAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASP--TDTSKGLKAAQISAGYGHSLAVGS 930
Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR-------------RPSLISKLPYSEEVVCGGYHTCV 302
+G Y +G ++ Q GN++ PS SK + +V G H+
Sbjct: 931 DGYAYAWG---LNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAGQEHSLA 987
Query: 303 LTSGGELYTWGSNENGCLGI 322
+ G Y WG N+NG LGI
Sbjct: 988 VDKDGNAYAWGDNDNGQLGI 1007
Score = 90.5 bits (223), Expect = 9e-16, Method: Composition-based stats.
Identities = 86/316 (27%), Positives = 137/316 (43%), Gaps = 41/316 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-----VCSAFEKHSLKAL--ACGGAHTLFLTETGCVYAT 95
WG YG+LG S S + PV LKA+ + G H+L L G YA
Sbjct: 760 WGYNSYGQLGNNSTSSSYVPVRVRDPASPNDASKGLKAIQVSAGDYHSLALGSDGYAYAW 819
Query: 96 GLNDFGQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITVDGELY 145
G +G+LG + + S P+R+ GLK Q+S G +HS A+ DG Y
Sbjct: 820 GDGSYGKLG-NNSRSSSYVPVRVRDPDSPNDASKGLK--ATQVSAGQNHSLAVGSDGYAY 876
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTK-----VECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
WG S G+LG ++ +P+ + + G+ Q + G+ S+AV G +
Sbjct: 877 AWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKAAQISAGYGHSLAVGSDGYAYA 936
Query: 201 WGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
WG +LG+ S+ +R +P +G+K +AG HS +D++G
Sbjct: 937 WGLNDYYHQLGNNSSSNSSVPVRVRDPDSPS--DASKGLKATQVSAGQEHSLAVDKDGNA 994
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------------EVVCGGYHTCVLTSGG 307
Y +GD + L +G+ P + L ++ ++ G +H+ + + G
Sbjct: 995 YAWGDND-NGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWMRAVQITAGDHHSLAIGTDG 1053
Query: 308 ELYTWGSNENGCLGIG 323
WGSN +G LG G
Sbjct: 1054 NTKAWGSNRDGRLGDG 1069
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 63/210 (30%), Positives = 89/210 (42%), Gaps = 26/210 (12%)
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK------VECLSGIFT-KQAAL 184
Y S A+ DG Y WG NS G+LG G + P+ K L FT Q +
Sbjct: 684 YGFSLAVGSDGNAYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSA 743
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S+AV G V +WG G+LG+ SS +R +P +G+K +
Sbjct: 744 GDYYSLAVGSDGYVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPN--DASKGLKAIQVS 801
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI-------------SKLPYSE 291
AG HS + +G Y +GD + K+ GN++R S + SK +
Sbjct: 802 AGDYHSLALGSDGYAYAWGDGSYGKL----GNNSRSSSYVPVRVRDPDSPNDASKGLKAT 857
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+V G H+ + S G Y WG G LG
Sbjct: 858 QVSAGQNHSLAVGSDGYAYAWGDGSYGKLG 887
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 69/147 (46%), Gaps = 17/147 (11%)
Query: 39 FAALWGNGDY-GRLGLGSLESRWRPVVCSAFEKHS-----LKA--LACGGAHTLFLTETG 90
+A WG DY +LG S + PV + S LKA ++ G H+L + + G
Sbjct: 933 YAYAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAGQEHSLAVDKDG 992
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRI---------SGLKKEVVQISTGYHHSSAITVD 141
YA G ND GQLGI + P+++ +G VQI+ G HHS AI D
Sbjct: 993 NAYAWGDNDNGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWMRAVQITAGDHHSLAIGTD 1052
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIP 168
G WG N +G+LG G K P+P
Sbjct: 1053 GNTKAWGSNRDGRLGDGTTNTKWAPVP 1079
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 1656 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 1715
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 1716 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 1773
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 1774 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 1830
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 1831 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 1883
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 1884 RPRLVAALQGKKVNRVACGSAHT 1906
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 664 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 723
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 724 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 781
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 782 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 838
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 839 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 887
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 888 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 919
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 610 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 669
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 670 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 728
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 729 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 782
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 783 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 837
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 838 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 885
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 1616 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 1674
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 1675 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 1732
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 1733 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 1783
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 1784 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1843
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 1844 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 1877
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 1550 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1607
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 1608 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 1665
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 1666 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 1720
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 1721 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1774
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 1775 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 1825
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 592 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 651
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 652 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 709
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 710 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 760
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 761 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 820
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 821 TWGKGDYFRLGHG 833
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 546 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 603
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 604 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 657
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 658 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 717
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 718 LGEYGRLGHG 727
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 1545 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1603
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 1604 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 1663
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 1664 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1714
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 1715 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 1773
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 1814 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 1873
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 1874 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 1908
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 1543 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 1602
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 1603 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 1662
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 1663 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 1717
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG +S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------GG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGNAGNEVLYSTVNDEIFVLGTNCSGCLGLGDAQS-TIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGP---------TANQPIPRRV 198
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
KV + A G + S + + G VY++G ++ G + P ++ L
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
Group]
Length = 917
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 135/299 (45%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327
Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + R P L+ E +V CG YH VLT E++TWG NG LG G
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHG 386
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G ESR +P ++ + +ACG + T+ LT +G V + G + +GQ
Sbjct: 271 WGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQ 330
Query: 103 LGISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G L RI+G + V+Q++ G +H + +T E++ WGK +NG+LG G
Sbjct: 331 LGNPNSDGRLPCLVEDRIAG--EHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDI 388
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT+VE L + A G + A+
Sbjct: 389 EDR--KVPTQVEALKDRAVRHIACGANFTAAI 418
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I L+G+ V + G H+A I G+++ FGD + + P + L
Sbjct: 177 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHG 282
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 133/273 (48%), Gaps = 21/273 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 5 GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 63
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V +++ G +HS +T DGE++ WG N++GQ+G G A ++I
Sbjct: 64 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLI 123
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 124 PRRV-TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SGN 173
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----P 281
+ TP I L+G++V+ A G+ H+ + + G+VY +G + ++ GN + + P
Sbjct: 174 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPAP 231
Query: 282 SLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
++ K E C HT T GG +Y WG
Sbjct: 232 VVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 264
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 107/230 (46%), Gaps = 14/230 (6%)
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQL 155
N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+ QL
Sbjct: 2 NCCGCLGLGD-VQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQL 60
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++P LS + A G S+ +T G+V +WG SG++G G +
Sbjct: 61 GNGTTNHGLVPCHISTN-LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 119
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ L R T +++ + A G + S + G VY++G ++
Sbjct: 120 NQLIPRRVTGCLQNKVVVNI--------ACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 171
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P I+ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 172 GNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 221
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 157 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 216
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 217 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 269
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 270 --SVTLPHLTHFSCTDDVF 286
>gi|456888932|gb|EMF99869.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200701203]
Length = 482
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 136/299 (45%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 178 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 235
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 236 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 294
Query: 149 KNSNGQLGLGK-KAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ AA I P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 295 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASNGRIYSWGLNAS 352
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L AG S I +NG V +G +
Sbjct: 353 GQLGIGGNGS--------PNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANG 404
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H L GE+Y WG N G LG
Sbjct: 405 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 463
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 119/262 (45%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 107 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 165
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 166 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 223
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V IA
Sbjct: 224 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVIA-- 276
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VY++G + L P + L +++ G H
Sbjct: 277 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 336
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
L S G +Y+WG N +G LGIG
Sbjct: 337 ALASNGRIYSWGLNASGQLGIG 358
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 95 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 153
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
S IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ P +
Sbjct: 154 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 209
Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ G+ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 210 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG 267
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 268 LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNG 304
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 73/176 (41%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 292 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASNGRIYSWGL 349
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P L + G S +I +GE+ WG N N L
Sbjct: 350 NASGQLGIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANL 409
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 410 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 463
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 134/283 (47%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ + PV A LA G H L ++ G V++ G N GQ
Sbjct: 726 WGDNSLGQLGNGATSAS--PVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQ 783
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG E P ++G + + ++ G S A++ DG ++ WG N +GQLG G A
Sbjct: 784 LGY-EGSATQTSPRWLTG-PECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTA 841
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +V L+ + A G + ++AV G V +WGA GSG+LG G
Sbjct: 842 RT--APARVPGLAHVVAIAA--GSDHALAVRADGTVWAWGANGSGQLGDGT--------- 888
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+TS P +KEL V V A G HS + +G V+ +G ++ +G R
Sbjct: 889 TTSRAVPMQVKEL--VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQL--GDGTTTSRTL 944
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S L + + G H+ L GG ++ WG+N +G LG G
Sbjct: 945 PVFVSTLSGVQAIASGAQHSLALAEGGVVWAWGANGSGQLGDG 987
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 149/327 (45%), Gaps = 57/327 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET---GCVYATGLND 99
WG G+LG G+L+SR PV S + ALA GG+H++ + T G V+A G N
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLTG--IVALAGGGSHSVAASSTTLGGKVWAWGDNT 277
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+GQLG ++ SL PL + GL +VV +++G HS A+ D ++ WG N+ Q
Sbjct: 278 YGQLGNGGDV-SSLLPLEVPGLT-QVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTG 335
Query: 160 KAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES--S 216
+ + +P+ +SG+ QA A G S+ G L WGA GSG+LG+G S +
Sbjct: 336 TSVQRVPV-----RVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRA 390
Query: 217 ILG------------------FLRST---------------------SEYTP-RLIKELE 236
+ G FLR S P RL L
Sbjct: 391 LPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPAPVRLSSTLT 450
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
V+ A++ HS + +G V+ +GD A ++ G P+ + + + E+ G
Sbjct: 451 SVRALSASS--YHSLALRSDGTVWAWGDNAYGQLGDTSGGRRPSPAQVPGVAGATEIAAG 508
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
YH+ L S G ++TWG N G LG G
Sbjct: 509 TYHSLALRSDGTVWTWGDNSYGQLGAG 535
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 136/280 (48%), Gaps = 19/280 (6%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ YG+LG G+ R P V + +A G H+L L +G V+A G N +G
Sbjct: 524 WGDNSYGQLGAGATPRGPRAPAVVPGLAV--ITHVAAGLFHSLALDSSGQVWAWGDNVYG 581
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ P R+SGL + I G +S A+ DG ++ WG+NSNGQLG G
Sbjct: 582 QLGDGSTTSRNV-PGRVSGLPAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTT 640
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
A+ P+P +V L + G +VA+ G + +WG SG+LG+G
Sbjct: 641 AR--PVPARV-SLPATLVALSTRG-SHTVALDTTGMLWAWGRNVSGQLGNGTL------- 689
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
SE TPR + +V+ A+G + + +G V+ +GD ++ ++ + + P
Sbjct: 690 --VSESTPRRVPSF--ARVQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSASPVP 745
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P + + G H ++S G ++++GSN G LG
Sbjct: 746 VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLG 785
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 132/272 (48%), Gaps = 20/272 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G++ +R P + A+A G H L + G V+A G N GQ
Sbjct: 826 WGDNGSGQLGDGAVTARTAPARVPGLAH--VVAIAAGSDHALAVRADGTVWAWGANGSGQ 883
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+++ L +VV ++ G HS A+ DG ++ WG N +GQLG G +
Sbjct: 884 LGDGTTTSRAV-PMQVKELV-DVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTS 941
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ V LSG+ + A G + S+A+ GG V +WGA GSG+LG G
Sbjct: 942 RTLPV--FVSTLSGV--QAIASGAQHSLALAEGGVVWAWGANGSGQLGDGT--------- 988
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+TS P + L GV+ +A A F + G+V+ +G+ + ++ N +P
Sbjct: 989 TTSRTRPVQVSGLSGVQGLVAGASF---SLALTPGKVWSWGNNSAGQLGDGTLNSRSQPG 1045
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
L + G HT VL S +WG+
Sbjct: 1046 AGPTLSSFVALSAGAQHTVVLRSDDSFLSWGT 1077
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 125/253 (49%), Gaps = 22/253 (8%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
++A+A G +L L+ G V+A G N GQLG + P R+ GL VV I+ G
Sbjct: 804 IEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGA-VTARTAPARVPGLA-HVVAIAAGS 861
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK--VECLSGIFTKQAALGFEQSV 190
H+ A+ DG ++ WG N +GQLG G ++ +P+ K V+ ++ A G S+
Sbjct: 862 DHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVDVVA------VAGGSGHSL 915
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
AV G V +WGA GSG+LG G +TS P + L GV+ A+G HS
Sbjct: 916 AVRADGTVWAWGANGSGQLGDGT---------TTSRTLPVFVSTLSGVQA--IASGAQHS 964
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
+ E G V+ +G ++ RP +S L + +V G + LT G+++
Sbjct: 965 LALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSGLSGVQGLVAGASFSLALTP-GKVW 1023
Query: 311 TWGSNENGCLGIG 323
+WG+N G LG G
Sbjct: 1024 SWGNNSAGQLGDG 1036
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 133/281 (47%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV +L AL+ G+HT+ L TG ++A G N GQ
Sbjct: 626 WGENSNGQLGDGTTTAR--PVPARVSLPATLVALSTRGSHTVALDTTGMLWAWGRNVSGQ 683
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P R+ + V ++G + A+ DG ++ WG NS GQLG G +A
Sbjct: 684 LGNGTLVSES-TPRRVPSFAR-VQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSA 741
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P V+ + T A G + +AV+ G V S+G+ G+ LG+
Sbjct: 742 SPVP----VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQ---------LGYEG 788
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S ++ +PR + E ++ AAG L S + +G V+ +GD ++ P+
Sbjct: 789 SATQTSPRWLTGPE--CIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPA 846
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + + G H + + G ++ WG+N +G LG G
Sbjct: 847 RVPGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDG 887
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 136/286 (47%), Gaps = 28/286 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G + R V + A+A G H+L L G V+A G N GQ
Sbjct: 122 WGTNTDGQLGDGVSQ---RSVPAQVAGLTGVTAIAAGNLHSLALIN-GAVWAWGNNTTGQ 177
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P +++GL EVV I+ G HS A+ DG ++ WG N +GQLG G +
Sbjct: 178 LGDGSSTSRS-TPAKVAGLT-EVVAIAAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDS 235
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ +V L+GI A G SVA + GGKV +WG G+LG+G + S L
Sbjct: 236 RSTPV--RVSGLTGIVAL--AGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNGGDVSSL- 290
Query: 220 FLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L E+ G+ +A A+G HS + + V+ +GD A Q G
Sbjct: 291 -----------LPLEVPGLTQVVALASGTSHSLALRGDDSVWAWGDNA-QAQTAQTGTSV 338
Query: 279 RR-PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+R P +S + ++ + CG + V WG+N +G LG G
Sbjct: 339 QRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNG 384
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 121/251 (48%), Gaps = 22/251 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
LA G H+L++T G V+A G N GQLG + +S P ++ GL V ++ G HS
Sbjct: 53 LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHS-TPTQVVGLTG-VTAVAAGNTHS 110
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ +G ++ WG N++GQLG G V P +V L+G+ A G S+A+
Sbjct: 111 MALREEGTVWTWGTNTDGQLGDGVSQRSV---PAQVAGLTGV--TAIAAGNLHSLALI-N 164
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG +G+LG G STS TP + L +V AAG HS +
Sbjct: 165 GAVWAWGNNTTGQLGDGS---------STSRSTPAKVAGL--TEVVAIAAGDFHSLALKR 213
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS---GGELYTW 312
+G V+ +G ++ + P +S L + GG H+ +S GG+++ W
Sbjct: 214 DGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAW 273
Query: 313 GSNENGCLGIG 323
G N G LG G
Sbjct: 274 GDNTYGQLGNG 284
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 111/265 (41%), Gaps = 23/265 (8%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV S +ALACG A +L G N GQLG + +L P R+ L
Sbjct: 342 PVRVSGVSD--AQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRAL-PGRVPSL 398
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
++ G HH DG ++ WG N+ GQLG G ++ P+ LS T
Sbjct: 399 TAGA-SLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPAPV-----RLSSTLTSV 452
Query: 182 AALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
AL S+A+ G V +WG G+LG G R + P + E
Sbjct: 453 RALSASSYHSLALRSDGTVWAWGDNAYGQLGD-----TSGGRRPSPAQVPGVAGATE--- 504
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGY 298
AAG HS + +G V+ +GD + ++ R P+++ L V G +
Sbjct: 505 ---IAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPGLAVITHVAAGLF 561
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
H+ L S G+++ WG N G LG G
Sbjct: 562 HSLALDSSGQVWAWGDNVYGQLGDG 586
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+++ G +HS +T G ++ WG N+ GQLG G PT+V L+G+ A G
Sbjct: 52 RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQH--STPTQVVGLTGV--TAVAAGN 107
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A+ G V +WG G+LG G + P + L GV AAG
Sbjct: 108 THSMALREEGTVWTWGTNTDGQLGDGV----------SQRSVPAQVAGLTGVTA--IAAG 155
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
LHS + NG V+ +G+ ++ P+ ++ L + G +H+ L
Sbjct: 156 NLHSLAL-INGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEVVAIAAGDFHSLALKRD 214
Query: 307 GELYTWGSNENGCLGIG 323
G ++ WG N +G LG G
Sbjct: 215 GTVWAWGGNYSGQLGDG 231
>gi|295789059|ref|NP_001171423.1| X-linked retinitis pigmentosa GTPase regulator isoform 4 [Mus
musculus]
gi|74223915|dbj|BAE23845.1| unnamed protein product [Mus musculus]
Length = 651
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 145/290 (50%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL T+TG VYA G N+ G
Sbjct: 1 MFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEG 60
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + Q+S G + S+A+T DG+L+MWG NS GQ+GL K
Sbjct: 61 QLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDK 120
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP E G + G+ S VT G++ ++G +G+LG E +L
Sbjct: 121 SNVCIP----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNE--LLMN 174
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
RS P+ + + +++A G H+ + E VY FG + LF+
Sbjct: 175 HRS-----PQRVLGIPERVIQVACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE-- 225
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +I ++ + + CG HT ++T G LYT+G +G LG+G
Sbjct: 226 --TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLG 273
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)
Query: 24 LGICKRWI--------SSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLK 74
LGI +R I + L + +G G +G+LGLG+ L P + + +
Sbjct: 182 LGIPERVIQVACGGGHTVVLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKIC 241
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQI 128
++CG HT +TE G +Y G G+LG+ EN P S + VQ+
Sbjct: 242 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQL 296
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 262 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 307
>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
Length = 1765
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 145/303 (47%), Gaps = 40/303 (13%)
Query: 42 LWGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+WG+ D G+LGLG E ++ PV F ++ +ACG H L + + G V+A G ND
Sbjct: 524 VWGSNDEGQLGLGEQVEEDQYEPVKLDCFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 582
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG----------------E 143
GQLG+ + S EP ++ L+ + + + G +S+ IT +G +
Sbjct: 583 DGQLGLGV-LRPSFEPAAVTALR-QAIDVFCGDDYSACITSNGGAQTVSLALESGTEFGD 640
Query: 144 LYMWGKNSNGQLGLGKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
L+ WG +G+LGLG+ A I P KV + +LG ++A+T G+ +WG
Sbjct: 641 LWTWGAAESGKLGLGEDVASGSILTPQKVPF--SVPVCACSLGTSHALAITARGECYAWG 698
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
AG GRLG G + + Y P +GV+++ AAG HS + +G ++I+
Sbjct: 699 AGYYGRLGIGT---------TANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIW 749
Query: 263 GDRAVDKMLFQEGNHAR---RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN---E 316
G + D N R + S +P + + +H+ +T GE++ WG N +
Sbjct: 750 GKKE-DTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQ 808
Query: 317 NGC 319
GC
Sbjct: 809 TGC 811
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 122/287 (42%), Gaps = 36/287 (12%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-- 118
+P +K + ++CG HTL L++ G +YA G+ +G LG + + P+R+
Sbjct: 171 KPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDT-SDAYSPVRVLL 229
Query: 119 -----SGLKKEVVQI-------------STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
SG KKE + I + G HS A T DG L+ WG NG+LGLG
Sbjct: 230 GSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ + + G S + G + +WG+GG GRLGHG + I
Sbjct: 290 RGSL--SPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEI--- 344
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
PR ++ GV V A G H+ + G V+ +G + E
Sbjct: 345 ------PVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGM 398
Query: 281 PSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L E V G YH+ +T GG+L WG + LG G
Sbjct: 399 VTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHG 445
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 139/342 (40%), Gaps = 71/342 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHS------------------LKALACGGAHT 83
WG G YG LG G + PV V EK S + A G H+
Sbjct: 205 WGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHS 264
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
+ T G ++ G G+LG+ N G SL P + L ++VV +S G HS+ I G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDVVFVSAGDSHSACIDRQG 323
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
LY WG G+LG G + IP+P KVE G+ Q A G ++A+T G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
AG L G G + P+ + ++E V V AAG HSA + G + ++
Sbjct: 382 AG----LALGLGEGEDGGGGMVT--VPKHLSDIE-VAVLNVAAGPYHSAAVTVGGDLLVW 434
Query: 263 GDRAVDKMLFQEGNHARRPSLISKL--------------------PYSEEVV-------- 294
G ++ + + P ++ L YS+ V
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGA 494
Query: 295 -------------CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG HT LT G ++ WGSN+ G LG+G
Sbjct: 495 GANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLG 536
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 23/263 (8%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIST 130
+L++L CG HT+ LT TG V+ G ND GQLG+ E + EP+++ + +I+
Sbjct: 502 TLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIAC 561
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPIPTKVECLSGIFTKQ--AA 183
G H A+ G+++ WG N +GQLGLG + A V + ++ G +
Sbjct: 562 GSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSACITS 621
Query: 184 LGFEQSVAV-----TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
G Q+V++ T G + +WGA SG+LG G++ + S S TP+ + V
Sbjct: 622 NGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVA------SGSILTPQKVP--FSV 673
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVVCG 296
V + G H+ I G Y +G ++ +A P+ K V G
Sbjct: 674 PVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAG 733
Query: 297 GYHTCVLTSGGELYTWGSNENGC 319
H+ L+ G+L+ WG E+ C
Sbjct: 734 ASHSLALSMDGDLWIWGKKEDTC 756
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 140/338 (41%), Gaps = 67/338 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG+G +GRLG G P F + +ACG HTL LT G V+A GL
Sbjct: 328 WGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG 387
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G G P +S ++ V+ ++ G +HS+A+TV G+L +WG + +LG G +
Sbjct: 388 LGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQ 447
Query: 161 AAKVIPIPTKVECLSG---IFTKQAALGFEQ----------------------------- 188
+ P P V L + Q+ LG +
Sbjct: 448 QNQ--PFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQS 505
Query: 189 -------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+VA+TG G V WG+ G+LG G++ +Y P + + ++
Sbjct: 506 LGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQV-------EEDQYEPVKL-DCFSTPIR 557
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG-GYHT 300
A G H + + G V+ +G ++ + P+ ++ L + +V CG Y
Sbjct: 558 RIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSA 617
Query: 301 CVLTSG---------------GELYTWGSNENGCLGIG 323
C+ ++G G+L+TWG+ E+G LG+G
Sbjct: 618 CITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLG 655
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 33/213 (15%)
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G +H+ A+T G +++WG N GQLGLG++ + P K++C S ++ A G + +
Sbjct: 509 GENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPI-RRIACGSKHCL 567
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLH 249
AV G V +WGA G+LG LG LR + E P + L + + V G +
Sbjct: 568 AVAQYGDVFAWGANDDGQLG-------LGVLRPSFE--PAAVTALRQAIDV---FCGDDY 615
Query: 250 SACIDENGRVYI----------FGDR----AVDKMLFQEGNHARRPSLIS--KLPYSEEV 293
SACI NG FGD A + G S+++ K+P+S V
Sbjct: 616 SACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVPV 675
Query: 294 VC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H +T+ GE Y WG+ G LGIG
Sbjct: 676 CACSLGTSHALAITARGECYAWGAGYYGRLGIG 708
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YGRLG+G+ + + P C + ++++A G +H+L L+ G ++ G +
Sbjct: 697 WGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTC 756
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+ N L +V I+ HHS A+T GE++ WG N Q G GK+ A
Sbjct: 757 STTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQA 816
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ + P + L + + A G + S V G+V + G GRLG G
Sbjct: 817 ERLDRPEMIAGLPNV-CQWVATGPQASFFVLCSGEVYAAGVINGGRLGTG 865
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 117/294 (39%), Gaps = 43/294 (14%)
Query: 72 SLKALACGGAHTLFLTETGC---VYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQ 127
S+K +A G HTL + G + A G N LG+ + P + + V +
Sbjct: 47 SVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFE 106
Query: 128 ISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAK------------------- 163
+S G ++S+ + G++Y +G + G+LG K A+
Sbjct: 107 VSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPS 166
Query: 164 -VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P +V + + G + ++A++ GG + +WG G G LG G S +R
Sbjct: 167 WFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVR 226
Query: 223 ST--SEYTPRLIKE--------LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
SE KE + V V AAG HS +G ++ +G ++
Sbjct: 227 VLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGL 286
Query: 273 QEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P+++ + +VV G H+ + G LYTWGS G LG G
Sbjct: 287 GHNRGSLSPAVVDYI-LDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHG 339
>gi|418719204|ref|ZP_13278404.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. UI 09149]
gi|421094338|ref|ZP_15555056.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200801926]
gi|410362760|gb|EKP13795.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200801926]
gi|410744357|gb|EKQ93098.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. UI 09149]
Length = 506
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 136/299 (45%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGK-KAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ AA I P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASNGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H L GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 487
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 119/262 (45%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V IA
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVIA-- 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VY++G + L P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
L S G +Y+WG N +G LGIG
Sbjct: 361 ALASNGRIYSWGLNASGQLGIG 382
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
S IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ P +
Sbjct: 178 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233
Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ G+ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 292 LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNG 328
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASNGRIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P L + G S +I +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + P K V + + G + A+ G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFALLGDGEIYGWGWNFKGSLG 487
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 128/269 (47%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L+ V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 TPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTPIMVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 283 KERVVEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
TP ++ E E V V+IAA H SA + G VY++G
Sbjct: 276 -------PTPIMV-EKERV-VEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 13/139 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S+N S P+ + K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNLLSPTPIMVE--KERVVEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 --SVVLPHLTHFSCTDDVF 333
>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
Length = 916
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 140/301 (46%), Gaps = 33/301 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E RP + + ++ +ACG HT +T TG +Y+ G ++
Sbjct: 101 WGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P R+SG + +V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGNDVGHWI-PKRVSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
K + P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 D--LKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGD 277
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
RLGHG + + L P + L A G + + +G+V G+
Sbjct: 278 KHRLGHGDKETRL---------KPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGN- 327
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
AV L + R P L+ E+V+ CG YH VLT E++TWG NG LG
Sbjct: 328 AVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACGSYHVAVLTGRNEVFTWGKGANGRLGH 387
Query: 323 G 323
G
Sbjct: 388 G 388
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E+R +P + H +ACG + T+ LT +G V + G +GQ
Sbjct: 273 WGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQ 332
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + G + + ++V+QI+ G +H + +T E++ WGK +NG+LG G
Sbjct: 333 LGNPHSDGRIPCLVEDKIVGEQVIQIACGSYHVAVLTGRNEVFTWGKGANGRLGHGDIED 392
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT VE L + A G + A+
Sbjct: 393 R--KVPTLVEVLKDRAVRYIACGANFTAAI 420
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ + +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCV--RPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ SWG G G LGHG + + P+
Sbjct: 126 LTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGND---------VGHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG++V + G H+A I G+++ FGD + + + P + L
Sbjct: 177 VSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVLT-------------SGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHG 284
>gi|398332633|ref|ZP_10517338.1| RCC1 domain-containing protein [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 527
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 138/299 (46%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + + A G H L L G V
Sbjct: 223 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTV 280
Query: 93 YATGLNDFGQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL+ +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 281 VAFGQNNVGQLGNGANNLNADSFSMDPVAVVGLR-DVIQVIAGSEHSAALTENGEVYVWG 339
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A IP KVE L GI KQ A G + +A+ G++ SWG S
Sbjct: 340 RNQYGNLGNGRLSAANAAQSIPVKVEGLPGI--KQIANGRDHILALASDGRIYSWGLNAS 397
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G S TP + L + AG S I ++G V +G
Sbjct: 398 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 449
Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H VL GE+Y WG N G LG
Sbjct: 450 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 508
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 122/262 (46%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 152 LSAGGAHSGFL-KNGEVYTAGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 210
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V + A GF
Sbjct: 211 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGIDDAV--MGAYGF 268
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G + L + S P + L V IA
Sbjct: 269 NHALILKSDGTVVAFGQNNVGQLGNGANN-----LNADSFSMDPVAVVGLRDVIQVIA-- 321
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VY++G + N A+ P + LP +++ G H
Sbjct: 322 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSIPVKVEGLPGIKQIANGRDHIL 381
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
L S G +Y+WG N +G LGIG
Sbjct: 382 ALASDGRIYSWGLNASGQLGIG 403
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 140 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTAGRNNFGQLGTGNSTGDENNDVIVKLNSI 198
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
S IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ + P L
Sbjct: 199 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 254
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ ++ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 255 VPGID--DAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANNLNADSFSMDPVAVVG 312
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 313 LRDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNG 349
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 72/177 (40%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L ++ PV +K +A G H L L G +Y+ GL
Sbjct: 337 VWGRNQYGNLGNGRLSAANAAQSIPVKVEGLP--GIKQIANGRDHILALASDGRIYSWGL 394
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P+ L + G S +I GE+ WG N N L
Sbjct: 395 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 454
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K + GI G + + G G++ WG G LG
Sbjct: 455 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 509
>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
Length = 951
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 138/297 (46%), Gaps = 36/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
WG GRLG G P + F +++ CG HT +T +G +YA G D
Sbjct: 320 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 379
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG+ + +P+RI G + V IS G H++ +T +G+L+ +G + G LG G
Sbjct: 380 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 438
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
+ + IP +VE L+G T +AA G S AV T GK+ +WG G GRLGH
Sbjct: 439 DRIS--TNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 496
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
G L P + EL+ + A G + + +G+VY G D + D
Sbjct: 497 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHDI 547
Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ R PS I + +EV CG +H VL S E+YTWG NG LG G
Sbjct: 548 V--------RAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHG 596
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 133/280 (47%), Gaps = 42/280 (15%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+GD+ G LGLGS S W+PV + E +KA++CG HT F+T G ++ G
Sbjct: 372 WGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGT 431
Query: 100 FGQLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI-------TVDGELYMWG 148
FG LG IS NI +E L +G + ++ + G HS+A+ T G+L+ WG
Sbjct: 432 FGALGHGDRISTNIPREVEAL--NGCR--TIKAACGVWHSAAVVSVFGEATSSGKLFTWG 487
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFT---KQAALGFEQSVAVTGGGKVLSWGAGG 205
+G+LG G ++IP C++ + T +Q A G +VA++ G+V + G
Sbjct: 488 DGDDGRLGHGDIECRLIP-----SCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTAD 542
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
S I G L + ++E+ A GF H A ++ VY +G
Sbjct: 543 PSHDIVRAPSCIEGGLGKS------FVQEV--------ACGFHHIAVLNSKAEVYTWGKG 588
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
+ ++ + + P+L+ L + +VVCG +T +
Sbjct: 589 SNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 628
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
IS G +++ +T G++Y WG+ S G+LG G +P P ++ +G + A G
Sbjct: 301 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHG--VCSYVPHPKLIDEFNGSTVELADCGEF 358
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP-RLIKELEGVKVKIAAAG 246
+ AVT G + +WG G + +LG S + P R++ ++EG+ VK + G
Sbjct: 359 HTCAVTASGDLYAWGDG-------DHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCG 411
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVL- 303
H+A + G+++ FGD + + P + L + + CG +H+ +
Sbjct: 412 PWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 471
Query: 304 ------TSGGELYTWGSNENGCLGIG 323
TS G+L+TWG ++G LG G
Sbjct: 472 SVFGEATSSGKLFTWGDGDDGRLGHG 497
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ + + + G +V VT G++ SWG GRLGHG S +
Sbjct: 286 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPH------- 338
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSL 283
P+LI E G V++A G H+ + +G +Y +GD + L G +H + +
Sbjct: 339 --PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 396
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ Y + + CG +HT +TS G+L+T+G G LG G
Sbjct: 397 LGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 438
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4322 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGR 4381
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4382 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4439
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4440 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4496
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4497 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4549
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4550 RPRLVAALQGKKVNRVACGSAHT 4572
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3332 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3391
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3392 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3449
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3450 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3506
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3507 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3555
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3556 TVNRKPTLVHGLEGQKITRVACGSSHSVAWTT 3587
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 765 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISTFSGKQAGKHVVHIACGSTY 823
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 824 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 881
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 882 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 932
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 933 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 992
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 993 SWGSNDQ 999
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 3278 GEATNGRLGLG-LSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3336
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3337 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3395
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3396 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3450
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3451 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3504
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3505 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3553
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 703 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 751
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 752 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISTFSG 807
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 808 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 855
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 856 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 915
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 916 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 953
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V S F KH + +ACG ++ +T G +Y G
Sbjct: 780 WGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 838
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 839 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 897
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 898 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 955
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 956 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 995
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 120/274 (43%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4282 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 4340
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4341 PRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4398
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4399 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4449
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4450 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4509
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4510 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4543
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 4216 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4273
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4274 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4331
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4332 HGNRSP--CDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4386
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4387 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4440
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4441 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4491
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 3260 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRH 3319
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3320 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3377
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3378 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3428
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3429 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3488
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3489 TWGKGDYFRLGHG 3501
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 3214 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3271
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVK-----KVAVHSGG-RHATALTV 3325
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3326 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3385
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3386 LGEYGRLGHG 3395
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 836 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 895
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 896 GKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 954
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 955 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 997
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 4211 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4269
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4270 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4329
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4330 LGHGNRSPC---------DRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYG 4380
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4381 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4439
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 890 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 949
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 950 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 1006
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P PT L G+ TK A G QS A
Sbjct: 1007 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 1036
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4480 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4539
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4540 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4574
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 4209 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4268
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4269 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4328
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4329 KLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4383
>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG-6]
gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
trichoides DG6]
Length = 778
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 135/284 (47%), Gaps = 20/284 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN ++G+LG G+ R PV + + A+A G AHT LT +G V G N+ GQ
Sbjct: 80 WGNNEFGQLGDGTTIQRNTPVAVNGLSS-GVVAIAAGYAHTCALTTSGGVSCWGNNESGQ 138
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I P++++GL V I+ G +H+ A+T DG + WG N GQLG G
Sbjct: 139 LGNGITI-QRRTPVQVAGLSSGVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQ 197
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LS T A G + A+T GG V WG G+G+LG G
Sbjct: 198 RSTPV--QVAGLSSGVTAITA-GGSHTCALTTGGAVTCWGRNGNGQLGDG---------T 245
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP + L +V AG +++ + G V +G ++ +G R +
Sbjct: 246 TTQRSTPVNVLGLSS-EVAAITAGDVYTCALTTGGGVTCWGANWSGQL--GDGTTDERST 302
Query: 283 LISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + S + G HTC +T+GG + WG N+ LG G
Sbjct: 303 PVDVVGLSSGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDG 346
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 129/282 (45%), Gaps = 16/282 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ R PV + + A+ GG+HT LT G V G N GQ
Sbjct: 182 WGSNGYGQLGDGTTTQRSTPVQVAGLSS-GVTAITAGGSHTCALTTGGAVTCWGRNGNGQ 240
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ + GL EV I+ G ++ A+T G + WG N +GQLG G
Sbjct: 241 LGDGTTTQRS-TPVNVLGLSSEVAAITAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDE 299
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V LS T AA G + + A+T GG V WG +LG G
Sbjct: 300 RSTPV--DVVGLSSGVTAIAA-GNDHTCAITTGGGVSCWGVNQYSQLGDG---------T 347
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T + TP ++ L I AAG H+ + G V +G ++ R P
Sbjct: 348 TTQQSTPVVVNGLSSRAAAI-AAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPM 406
Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L ++ G HTC L++ G + WG+NE+G LG G
Sbjct: 407 QVEGLSSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDG 448
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 120/251 (47%), Gaps = 19/251 (7%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G A+T LT V G N+FGQLG I + P+ ++GL VV I+ GY H+
Sbjct: 61 IAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRN-TPVAVNGLSSGVVAIAAGYAHT 119
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+T G + WG N +GQLG G + P+ +V LS AA G + A+T
Sbjct: 120 CALTTSGGVSCWGNNESGQLGNGITIQRRTPV--QVAGLSSGVAAIAA-GEYHTCALTTD 176
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V WG+ G G+LG G +T TP + L I A G H+ +
Sbjct: 177 GAVTCWGSNGYGQLGDG---------TTTQRSTPVQVAGLSSGVTAITAGGS-HTCALTT 226
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTW 312
G V +G ++ +G +R + ++ L S EV G +TC LT+GG + W
Sbjct: 227 GGAVTCWGRNGNGQL--GDGTTTQRSTPVNVLGLSSEVAAITAGDVYTCALTTGGGVTCW 284
Query: 313 GSNENGCLGIG 323
G+N +G LG G
Sbjct: 285 GANWSGQLGDG 295
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 126/285 (44%), Gaps = 18/285 (6%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+ WG G+LG G+ R P+ + + G +HT L+ G V G N+
Sbjct: 384 SCWGRNWSGQLGDGTTTQRRTPMQVEGLSS-GVADITAGDSHTCALSTEGGVTCWGNNES 442
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG I S P+++ GL VV I+ G H+ A++ +G + WG N +GQLG G
Sbjct: 443 GQLGDGTTIQRS-TPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTT 501
Query: 161 AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ +VE L SG+ A G + A+T GG V WG G+LG G
Sbjct: 502 TQRSTPV--QVEGLSSGVMAITA--GDSHTCALTTGGGVTCWGGNWYGQLGDG------- 550
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+T P + L IAA G H+ + G V +G D++ +
Sbjct: 551 --TTTQRNMPVNVVGLSSGVAAIAAGGS-HTCALSTEGGVTCWGWNTYDQLGDGTRTNHN 607
Query: 280 RPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + L + GY HTC L + GE+ WG N G LG G
Sbjct: 608 TPVQVEGLSSGVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDG 652
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 125/277 (45%), Gaps = 20/277 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN + G+LG G+ R PV + A+ G +HT L+ G V G N GQ
Sbjct: 437 WGNNESGQLGDGTTIQRSTPVQVEGLSS-GVVAITAGDSHTCALSTEGGVTCWGGNGSGQ 495
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+++ GL V+ I+ G H+ A+T G + WG N GQLG G
Sbjct: 496 LGNGTTTQRS-TPVQVEGLSSGVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQ 554
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ V SG+ A G + A++ G V WG +LG G
Sbjct: 555 RNMPV-NVVGLSSGV--AAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTR-------- 603
Query: 223 STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T+ TP ++EG+ +AA AG+ H+ + +G V +G ++
Sbjct: 604 -TNHNTP---VQVEGLSSGVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMT 659
Query: 281 PSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNE 316
P +++ L + GY HTC L++GG + WG N+
Sbjct: 660 PVVVNGLSSEVAAIVAGYAHTCALSTGGGVTCWGWNK 696
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 126/286 (44%), Gaps = 24/286 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + A+ G +HT LT G V G N +GQ
Sbjct: 488 WGGNGSGQLGNGTTTQRSTPVQVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQ 546
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+ + GL V I+ G H+ A++ +G + WG N+ QLG G +
Sbjct: 547 LGDGTTTQRNM-PVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTN 605
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ +VE LS AA G+ + A+ G+V WG G+LG G
Sbjct: 606 HNTPV--QVEGLSSGVAAIAA-GYAHTCALITSGEVTCWGWNWYGQLGDG---------T 653
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN----HA 278
+T TP ++ L +V AG+ H+ + G V +G +Q GN
Sbjct: 654 TTQRMTPVVVNGLSS-EVAAIVAGYAHTCALSTGGGVTCWGW----NKYYQLGNGTISQR 708
Query: 279 RRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + G HTC L++GG + WG + G LG+G
Sbjct: 709 SIPMDVDGLSSGVAALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVG 754
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R PVV + + A+ G AHT L+ G V G N + Q
Sbjct: 641 WGWNWYGQLGDGTTTQRMTPVVVNGLSSE-VAAIVAGYAHTCALSTGGGVTCWGWNKYYQ 699
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + I P+ + GL V ++ G H+ ++ G + WG + GQLG+G A
Sbjct: 700 LG-NGTISQRSIPMDVDGLSSGVAALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAY 758
Query: 163 KVIPIPTKV 171
+ P+ V
Sbjct: 759 RTTPVDVTV 767
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 154/311 (49%), Gaps = 28/311 (9%)
Query: 4 RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
+ LT ++ Y++K K+ G + ++ T+ R + WG G+ G+LG G+ S RP
Sbjct: 2729 KPLTDLSPYFIK---KVAVHSG-GRHALALTIDGRVFS-WGEGEDGKLGHGNKISYDRPK 2783
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
+ + + ++ +ACG +H+ +T +G +Y G ++G+LG +N+ L+P ++ L
Sbjct: 2784 LVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVP-QLKPKQVRALSH 2842
Query: 124 E-VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
E VVQ++ G + A+T +Y WG G+LG G +P VE L+
Sbjct: 2843 ERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGS--SLPQNVETLNSQQVI 2900
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q G + S+A++ GKV +WG G RLGHG +S + P++++EL V
Sbjct: 2901 QVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHV---------RWPQVVEELADKNV 2951
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN----HARRPSLISKLPYSEEVVCG 296
+ G LH + + G VY +GD Q+GN R+P+++ L V CG
Sbjct: 2952 IQVSVGALHCIAVTDRGEVYAWGDNDHG----QQGNGNTTVNRKPAIVRGLEAITNVACG 3007
Query: 297 GYHTCVLTSGG 307
H+ +S G
Sbjct: 3008 SSHSVAWSSTG 3018
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 134/287 (46%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + +P + + +K +A GG H L LT G V++ G + G
Sbjct: 2710 GEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDG 2769
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG I Y P + LK K + ++ G HS+A+T GELY WG G+LG G
Sbjct: 2770 KLGHGNKISYD-RPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDN 2828
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +V LS Q A G Q++A+T V SWG G G+LG G
Sbjct: 2829 VPQL--KPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGG----- 2881
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P+ ++ L +V G S + +NG+V+ +G ++ +H
Sbjct: 2882 ----SDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHV 2937
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R P ++ +L +V G H +T GE+Y WG N++G G G
Sbjct: 2938 RWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNG 2984
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 126/264 (47%), Gaps = 18/264 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG GS RP + + + ++ACGGAH+ +T +G +Y G +G+
Sbjct: 3730 WGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGR 3789
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV--DGELYMWGKNSNGQLGLGK 159
LG ++ L+P ++ L V+ ++ G + + V DG ++ WG G+LG G
Sbjct: 3790 LGHGDSED-QLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRG- 3847
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P K++ L + G + SVA+T G V +WG G RLGHG E +
Sbjct: 3848 -GSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHV-- 3904
Query: 220 FLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P+ ++ L+G +V A G LH ++G V+ +GD ++ N
Sbjct: 3905 -------RRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAI 3957
Query: 279 RRPSLISKL--PYSEEVVCGGYHT 300
+RP L++ L V CG HT
Sbjct: 3958 QRPKLVASLKGKKMNRVACGSAHT 3981
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 115/255 (45%), Gaps = 18/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L LT +G V++ G D G+LG P I L+ K VV ++ G
Sbjct: 3710 AVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSK-ALCERPKLIESLRDKHVVSVACGGA 3768
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
HS+ IT GELY WGK G+LG G ++ P KVE L+G + G Q++
Sbjct: 3769 HSACITASGELYTWGKGRYGRLGHGDSEDQLKP--KKVEELAGHNVLDVACGSGDAQTLC 3826
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
V+ G V SWG G G+LG G S P+ I L+ V G S
Sbjct: 3827 VSRDGLVWSWGDGDYGKLGRGG---------SDGCKFPQKIDSLQNAGVIKVECGSQFSV 3877
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
+ G VY +G ++ +H RRP + + V+ G H T GE
Sbjct: 3878 ALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGE 3937
Query: 309 LYTWGSNENGCLGIG 323
++TWG N+ G LG G
Sbjct: 3938 VFTWGDNDEGQLGDG 3952
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 134/290 (46%), Gaps = 23/290 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG +C A +L+ + GG TLF LT G VYATG
Sbjct: 3624 WGHNHRGQLGGVEGAKVKTATICDALT--ALRPVQIVGGEQTLFALTSDGKVYATGYGAG 3681
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LGI S P I L+ +V +++G H A+T G+++ WG+ +G+LG
Sbjct: 3682 GRLGIGGTESVS-TPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGH 3740
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G KA + P +E L A G S +T G++ +WG G GRLGHG
Sbjct: 3741 GSKA--LCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGD---- 3794
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+ ++EL G V A +G + C+ +G V+ +GD K+
Sbjct: 3795 -----SEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGS 3849
Query: 276 NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L + +V CG + LT+ G +YTWG + LG G
Sbjct: 3850 DGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHG 3899
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 39/249 (15%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V+ GLND QLG SE I +L+P+ I+G K + +S
Sbjct: 2654 VFVWGLNDKDQLGGLKGSKIKEPKFSEVIS-NLKPMNIAGGSKSLFIVSH---------- 2702
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG+++ G+ +NG+LGLG P P + LS F K+ A+ G ++A+T G+V
Sbjct: 2703 DGKVFACGEGTNGRLGLGHSHNVAQPKP--LTDLSPYFIKKVAVHSGGRHALALTIDGRV 2760
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG + S P+L++ L+ +++ A G HSA + +G
Sbjct: 2761 FSWGEGEDGKLGHGNK---------ISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGE 2811
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
+Y +G ++ + +P + L + +V CG T LT +Y+WG
Sbjct: 2812 LYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGD 2871
Query: 315 NENGCLGIG 323
+ G LG G
Sbjct: 2872 GDFGKLGKG 2880
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
++ ++++WG N QLG G K +K I P E +S + A G + V+ GKV
Sbjct: 2649 NIECKVFVWGLNDKDQLG-GLKGSK-IKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKV 2706
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+ G G +GRLG G ++ + ++ +P IK KV + + G H+ + +GR
Sbjct: 2707 FACGEGTNGRLGLGHSHNV-AQPKPLTDLSPYFIK-----KVAVHSGG-RHALALTIDGR 2759
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNE 316
V+ +G+ K+ RP L+ L +V CG H+ +TS GELYTWGS E
Sbjct: 2760 VFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGE 2819
Query: 317 NGCLGIG 323
G LG G
Sbjct: 2820 YGRLGHG 2826
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 88/186 (47%), Gaps = 15/186 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G ++ WG N GQLG G + AKV T + L+ + Q G + A+T GKV +
Sbjct: 3619 GVIHGWGHNHRGQLG-GVEGAKV-KTATICDALTALRPVQIVGGEQTLFALTSDGKVYAT 3676
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G S+ TP LI+ L+ V V A +G H + +G V
Sbjct: 3677 GYGAGGRLGIGGTESV---------STPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDV 3727
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +G+ K+ RP LI L + V CGG H+ +T+ GELYTWG
Sbjct: 3728 FSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRY 3787
Query: 318 GCLGIG 323
G LG G
Sbjct: 3788 GRLGHG 3793
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
WG+ D G+LG GS + RP + ++ + + +ACG AHT+ + + + T
Sbjct: 3941 WGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHTVSWSTSKSAHKT 3993
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 334 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 393
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 394 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 451
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 452 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 508
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 509 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 561
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 562 RPRLVAALQGKKVNRVACGSAHT 584
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 294 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 352
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 353 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 410
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 411 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 461
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 462 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 521
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 522 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 555
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 228 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 285
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 286 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 343
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 344 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 398
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 399 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 452
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 453 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 503
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 223 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 281
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 282 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 341
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 342 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 392
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 393 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 451
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 492 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 551
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 552 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 586
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 47/180 (26%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSI--------LGFLR------------------ 222
+++ G G + WG G+LG + + + L LR
Sbjct: 216 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 275
Query: 223 -----------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFG 263
+ S TP L++ ++ V +K A +G H + G VY +G
Sbjct: 276 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 335
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 336 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 395
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 137/296 (46%), Gaps = 32/296 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--------AHTLFLTETGCVYA 94
WG+ YG+LG G+ R PV + ALA GG AH+L L G V+A
Sbjct: 218 WGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTTVAISAHSLALRSDGTVWA 275
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P+++ GL V ++ G HS A+ DG ++ WG NS+GQ
Sbjct: 276 WGDNSAGQLGDGTTTERA-TPVQVLGLTS-VTALAAGAFHSLALRDDGTVWAWGNNSSGQ 333
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGF--EQSVAVTGGGKVLSWGAGGSG 207
LG G A+ P P +V L+ + A +LG + S+A+ G V +WG S
Sbjct: 334 LGDGTTTAR--PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 391
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+ G G + + TP + EL G + AG LH+ + +G V+ +GD +
Sbjct: 392 QFGDGMPA---------TRTTPVQVSELTGGTALV--AGDLHAVVLKSDGTVWAWGDNSS 440
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ +P +S L + G H+ + S G ++ WG N G LGIG
Sbjct: 441 GQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIG 496
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 19/282 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ D+G+LG G++ SR PV S +++A+ G AH++ + G V+ G NDFG
Sbjct: 584 VWGSNDFGQLGDGTVTSRKTPVQVSGLS--AMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 641
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ P+++SGL V ++ G +HS A+ DG L+ WG N+ GQLG G
Sbjct: 642 QLGDGTVTSRAM-PVQVSGLTG-VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 699
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P +V L+G+ A G S+A+ G V WGA G+LG G +
Sbjct: 700 --IQSTPAQVPGLTGVIALAAGNG--HSLALRTDGTVWGWGANSFGQLGDGTTTP----- 750
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
RST P L V AG ++ + V+ +G ++ ++ P
Sbjct: 751 RSTPTQVPGL------TNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTP 804
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + G H L + ++ WG N+ G +G G
Sbjct: 805 VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDG 846
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 131/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG+G +R PV + S+ ALA G +H+L L G V+ G N +GQ
Sbjct: 485 WGDNRRGQLGIGITATREIPVQATGLA--SISALAAGDSHSLALRGNGSVWTWGSNAYGQ 542
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + ++ GL ++ ++ G HHS A+ DG +++WG N GQLG G +
Sbjct: 543 LGDGTAIDRATA-AQVPGL-TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTS 600
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LS + +A G SVAV G V WG G+LG G
Sbjct: 601 RKTPV--QVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLGDGTV-------- 648
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TS P + L GV A G HS + +G ++ +G V ++ P+
Sbjct: 649 -TSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPA 705
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + G H+ L + G ++ WG+N G LG G
Sbjct: 706 QVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDG 746
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 131/283 (46%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G G +R PV S E AL G H + L G V+A G N GQ
Sbjct: 385 WGYNLSRQFGDGMPATRTTPVQVS--ELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 442
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E + +P+++SGL + ++TG HS A+ DG ++ WG N GQLG+G A
Sbjct: 443 LG--EGVTPVRAKPMQVSGLAA-ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITA 499
Query: 162 AKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP+ T + +S + A G S+A+ G G V +WG+ G+LG G
Sbjct: 500 TREIPVQATGLASISAL-----AAGDSHSLALRGNGSVWTWGSNAYGQLGDGTA-----I 549
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+T+ P L + AAG HS + +G V+++G ++ +
Sbjct: 550 DRATAAQVPGL------TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKT 603
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S L V G H+ + G ++ WG+N+ G LG G
Sbjct: 604 PVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDG 646
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 138/299 (46%), Gaps = 38/299 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV S+ A+A AH+L L G V+A G N +GQ
Sbjct: 168 WGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHSLALRSDGTVWAWGDNGYGQ 225
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--------HSSAITVDGELYMWGKNSNGQ 154
LG P+++ GL V ++ G + HS A+ DG ++ WG NS GQ
Sbjct: 226 LGDGTK-AQRTTPVQVLGLAG-VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQ 283
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P+ +V L+ + T AA F S+A+ G V +WG SG+LG G
Sbjct: 284 LGDGTTTERATPV--QVLGLTSV-TALAAGAF-HSLALRDDGTVWAWGNNSSGQLGDGT- 338
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--------FLHSACIDENGRVYIFGDRA 266
+T+ TP + L V + +AA G HS + +G V+ +G
Sbjct: 339 --------TTARPTPVQVPGLTSV-IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNL 389
Query: 267 VDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ F +G A R P +S+L +V G H VL S G ++ WG N +G LG G
Sbjct: 390 SRQ--FGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEG 446
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 38/261 (14%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
A++ G HTL L G V+A G N GQLG + P+++ GL V+ ++
Sbjct: 147 PAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRA-TPVQVPGLTS-VMAVAASEA 204
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS A+ DG ++ WG N GQLG G KA + P+ +V L+G+ T AA G +VA++
Sbjct: 205 HSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPV--QVLGLAGV-TALAAGGNGTTVAIS 261
Query: 194 G-------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
G V +WG +G+LG G +T TP ++ L V AAG
Sbjct: 262 AHSLALRSDGTVWAWGDNSAGQLGDGT---------TTERATP--VQVLGLTSVTALAAG 310
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC----------- 295
HS + ++G V+ +G+ + ++ +G RP+ + ++P V+
Sbjct: 311 AFHSLALRDDGTVWAWGNNSSGQL--GDGTTTARPTPV-QVPGLTSVIAVAAGGGDDSLG 367
Query: 296 -GGYHTCVLTSGGELYTWGSN 315
G H+ L S G ++ WG N
Sbjct: 368 MRGDHSLALKSDGTVWAWGYN 388
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 126/293 (43%), Gaps = 34/293 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV S+ ALA G H+L L + G V+A G N GQ
Sbjct: 276 WGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 333
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG---------YHHSSAITVDGELYMWGKNSNG 153
LG P+++ GL V+ ++ G HS A+ DG ++ WG N +
Sbjct: 334 LGDGTTTARP-TPVQVPGLTS-VIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 391
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
Q G G A + P+ +V L+G A G +V + G V +WG SG+LG G
Sbjct: 392 QFGDGMPATRTTPV--QVSELTGGTALVA--GDLHAVVLKSDGTVWAWGDNSSGQLGEG- 446
Query: 214 ESSILGFLRSTSEYTPRLIKELE--GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
TP K ++ G+ A A G HS + +G ++ +GD ++
Sbjct: 447 -------------VTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQL 493
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + G H+ L G ++TWGSN G LG G
Sbjct: 494 GIGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDG 546
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 95/222 (42%), Gaps = 54/222 (24%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WGN D+G+LG G++ SR PV S + A+A G H+L L G ++A G N+ G
Sbjct: 634 VWGNNDFGQLGDGTVTSRAMPVQVSGLT--GVTAVAVGVYHSLALRNDGTLWAWGYNNVG 691
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + G P ++ GL V+ ++ G HS A+ DG ++ WG NS GQLG G
Sbjct: 692 QLGNGTS-GIQSTPAQVPGLTG-VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTT 749
Query: 162 AKVIPIPTKVECLSGIFTKQA------ALGFEQSV------------------------- 190
+ PT+V L+ + A AL E+SV
Sbjct: 750 PR--STPTQVPGLTNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPVQV 807
Query: 191 -------AVTGGG----------KVLSWGAGGSGRLGHGQES 215
A+ G V +WG G++G G S
Sbjct: 808 SGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTAS 849
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R P + AL G +T+ L V+ G GQ
Sbjct: 735 WGANSFGQLGDGTTTPRSTPTQVPGLTN--VIALNAGAFYTVALRSERSVWEWGSKSAGQ 792
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++SGL +V ++ G H+ A+ D ++ WG N GQ+G G A
Sbjct: 793 LG-DGTVTQKTTPVQVSGLT-DVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGT--A 848
Query: 163 KVIPIPTKVE 172
++P P V
Sbjct: 849 SIMPAPVNVS 858
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 137/296 (46%), Gaps = 32/296 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--------AHTLFLTETGCVYA 94
WG+ YG+LG G+ R PV + ALA GG AH+L L G V+A
Sbjct: 217 WGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTTVAISAHSLALRSDGTVWA 274
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P+++ GL V ++ G HS A+ DG ++ WG NS+GQ
Sbjct: 275 WGDNSAGQLGDGTTTERA-TPVQVLGLTS-VTALAAGAFHSLALRDDGTVWAWGNNSSGQ 332
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGF--EQSVAVTGGGKVLSWGAGGSG 207
LG G A+ P P +V L+ + A +LG + S+A+ G V +WG S
Sbjct: 333 LGDGTTTAR--PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 390
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+ G G + + TP + EL G + AG LH+ + +G V+ +GD +
Sbjct: 391 QFGDGMPA---------TRTTPVQVSELTGGTALV--AGDLHAVVLKSDGTVWAWGDNSS 439
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ +P +S L + G H+ + S G ++ WG N G LGIG
Sbjct: 440 GQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIG 495
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 19/282 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ D+G+LG G++ SR PV S +++A+ G AH++ + G V+ G NDFG
Sbjct: 583 VWGSNDFGQLGDGTVTSRKTPVQVSGLS--AMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 640
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG ++ P+++SGL V ++ G +HS A+ DG L+ WG N+ GQLG G
Sbjct: 641 QLGDGTVTSRAM-PVQVSGLTG-VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 698
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P +V L+G+ A G S+A+ G V WGA G+LG G +
Sbjct: 699 --IQSTPAQVPGLTGVIALAAGNG--HSLALRTDGTVWGWGANSFGQLGDGTTTP----- 749
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
RST P L V AG ++ + V+ +G ++ ++ P
Sbjct: 750 RSTPTQVPGL------TNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTP 803
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + G H L + ++ WG N+ G +G G
Sbjct: 804 VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDG 845
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 131/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG+G +R PV + S+ ALA G +H+L L G V+ G N +GQ
Sbjct: 484 WGDNRRGQLGIGITATREIPVQATGLA--SISALAAGDSHSLALRGNGSVWTWGSNAYGQ 541
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + ++ GL ++ ++ G HHS A+ DG +++WG N GQLG G +
Sbjct: 542 LGDGTAIDRATA-AQVPGL-TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTS 599
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LS + +A G SVAV G V WG G+LG G
Sbjct: 600 RKTPV--QVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLGDGTV-------- 647
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TS P + L GV A G HS + +G ++ +G V ++ P+
Sbjct: 648 -TSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPA 704
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + G H+ L + G ++ WG+N G LG G
Sbjct: 705 QVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDG 745
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 131/283 (46%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G G +R PV S E AL G H + L G V+A G N GQ
Sbjct: 384 WGYNLSRQFGDGMPATRTTPVQVS--ELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 441
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG E + +P+++SGL + ++TG HS A+ DG ++ WG N GQLG+G A
Sbjct: 442 LG--EGVTPVRAKPMQVSGLAA-ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITA 498
Query: 162 AKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP+ T + +S + A G S+A+ G G V +WG+ G+LG G
Sbjct: 499 TREIPVQATGLASISAL-----AAGDSHSLALRGNGSVWTWGSNAYGQLGDGTA-----I 548
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+T+ P L + AAG HS + +G V+++G ++ +
Sbjct: 549 DRATAAQVPGL------TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKT 602
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S L V G H+ + G ++ WG+N+ G LG G
Sbjct: 603 PVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDG 645
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 138/299 (46%), Gaps = 38/299 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV S+ A+A AH+L L G V+A G N +GQ
Sbjct: 167 WGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHSLALRSDGTVWAWGDNGYGQ 224
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--------HSSAITVDGELYMWGKNSNGQ 154
LG P+++ GL V ++ G + HS A+ DG ++ WG NS GQ
Sbjct: 225 LGDGTK-AQRTTPVQVLGLAG-VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQ 282
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P+ +V L+ + T AA F S+A+ G V +WG SG+LG G
Sbjct: 283 LGDGTTTERATPV--QVLGLTSV-TALAAGAF-HSLALRDDGTVWAWGNNSSGQLGDGT- 337
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--------FLHSACIDENGRVYIFGDRA 266
+T+ TP + L V + +AA G HS + +G V+ +G
Sbjct: 338 --------TTARPTPVQVPGLTSV-IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNL 388
Query: 267 VDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ F +G A R P +S+L +V G H VL S G ++ WG N +G LG G
Sbjct: 389 SRQ--FGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEG 445
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 38/261 (14%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
A++ G HTL L G V+A G N GQLG + P+++ GL V+ ++
Sbjct: 146 PAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRA-TPVQVPGLTS-VMAVAASEA 203
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS A+ DG ++ WG N GQLG G KA + P+ +V L+G+ T AA G +VA++
Sbjct: 204 HSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPV--QVLGLAGV-TALAAGGNGTTVAIS 260
Query: 194 G-------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
G V +WG +G+LG G +T TP ++ L V AAG
Sbjct: 261 AHSLALRSDGTVWAWGDNSAGQLGDGT---------TTERATP--VQVLGLTSVTALAAG 309
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC----------- 295
HS + ++G V+ +G+ + ++ +G RP+ + ++P V+
Sbjct: 310 AFHSLALRDDGTVWAWGNNSSGQL--GDGTTTARPTPV-QVPGLTSVIAVAAGGGDDSLG 366
Query: 296 -GGYHTCVLTSGGELYTWGSN 315
G H+ L S G ++ WG N
Sbjct: 367 MRGDHSLALKSDGTVWAWGYN 387
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 126/293 (43%), Gaps = 34/293 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV S+ ALA G H+L L + G V+A G N GQ
Sbjct: 275 WGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 332
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG---------YHHSSAITVDGELYMWGKNSNG 153
LG P+++ GL V+ ++ G HS A+ DG ++ WG N +
Sbjct: 333 LGDGTTTARP-TPVQVPGLTS-VIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 390
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
Q G G A + P+ +V L+G A G +V + G V +WG SG+LG G
Sbjct: 391 QFGDGMPATRTTPV--QVSELTGGTALVA--GDLHAVVLKSDGTVWAWGDNSSGQLGEG- 445
Query: 214 ESSILGFLRSTSEYTPRLIKELE--GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
TP K ++ G+ A A G HS + +G ++ +GD ++
Sbjct: 446 -------------VTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQL 492
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + G H+ L G ++TWGSN G LG G
Sbjct: 493 GIGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDG 545
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 95/222 (42%), Gaps = 54/222 (24%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WGN D+G+LG G++ SR PV S + A+A G H+L L G ++A G N+ G
Sbjct: 633 VWGNNDFGQLGDGTVTSRAMPVQVSGLT--GVTAVAVGVYHSLALRNDGTLWAWGYNNVG 690
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + G P ++ GL V+ ++ G HS A+ DG ++ WG NS GQLG G
Sbjct: 691 QLGNGTS-GIQSTPAQVPGLTG-VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTT 748
Query: 162 AKVIPIPTKVECLSGIFTKQA------ALGFEQSV------------------------- 190
+ PT+V L+ + A AL E+SV
Sbjct: 749 PR--STPTQVPGLTNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPVQV 806
Query: 191 -------AVTGGG----------KVLSWGAGGSGRLGHGQES 215
A+ G V +WG G++G G S
Sbjct: 807 SGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTAS 848
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R P + AL G +T+ L V+ G GQ
Sbjct: 734 WGANSFGQLGDGTTTPRSTPTQVPGLTN--VIALNAGAFYTVALRSERSVWEWGSKSAGQ 791
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++SGL +V ++ G H+ A+ D ++ WG N GQ+G G A
Sbjct: 792 LG-DGTVTQKTTPVQVSGLT-DVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGT--A 847
Query: 163 KVIPIPTKVE 172
++P P V
Sbjct: 848 SIMPAPVNVS 857
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 137/293 (46%), Gaps = 29/293 (9%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LGLG +E W+P ++ +ACG HTLFLT +G VY
Sbjct: 6 WGNASHGQLGLGGIEEEQILTPSRIPWKP-------DSAVNQIACGHRHTLFLTASGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
A G ND+ QLG + PL+I L+ V+ QI+ G HS A++ G+++ WG N
Sbjct: 59 ACGSNDYSQLGHELP---TKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNEC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG ++ +P V L Q A G S+A+T G++ SWG+ G+LG
Sbjct: 116 GQLGHASD-QDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVS 174
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ + TP + L G+ V A G HS I ++ V+ +G ++
Sbjct: 175 SPNDL------QQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228
Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P+ + L V CG + LT G ++T G+ G LG G
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHG 281
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 132/283 (46%), Gaps = 16/283 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L ++ RP+ + + + +ACG H++ L+E G V++ G N+ GQL
Sbjct: 61 GSNDYSQLG-HELPTK-RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQL 118
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GKKA 161
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+
Sbjct: 119 GHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPND 178
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P ++ L GI A G S ++ V WG G+LG E
Sbjct: 179 LQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE------- 231
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P +K L + V+ A G S + G V+ G A ++ ++ P
Sbjct: 232 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEMLP 289
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
++ +L S +V CG HT L S G +Y +G +G LG
Sbjct: 290 RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLG 332
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ Q A G ++ +T GKV + G
Sbjct: 2 ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P I EL+ + A G HS + E G+V+ +
Sbjct: 62 SNDYSQLGHELPTK-----------RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSW 110
Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
GD ++ + + + P ++ L ++ CG H+ LT GELY+WGSN G
Sbjct: 111 GDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQ 170
Query: 320 LGIG 323
LG+
Sbjct: 171 LGVS 174
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 14/183 (7%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S L+ P+ + + A+ACGG H+ ++++ V+ G N+
Sbjct: 163 WGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNN 222
Query: 100 FGQLGISE--NIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG+++ N Y L+ LR G++ ++ G S +T++G ++ G + GQL
Sbjct: 223 CGQLGLNDETNRAYPTQLKTLRTLGVRF----VACGDEFSVFLTIEGGVFTCGAGAYGQL 278
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQE 214
G G + +++P V L G Q A G ++A V G++ +G G SG+LG
Sbjct: 279 GHGFSSNEMLP--RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNT 336
Query: 215 SSI 217
S+
Sbjct: 337 KSL 339
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4067 WGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4126
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4127 LGHSDSED-QLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4184
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4185 -GSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4242 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4294
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4295 RPRLVAALQGKKVNRVACGSAHT 4317
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3074 WGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3133
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3134 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3191
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3192 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3248
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3249 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3297
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3298 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3329
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQGGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ ++V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLEVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ PRL++ L G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 3020 GEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3078
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I L+ K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3079 DGKLGHFSRMNCD-KPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3137
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3138 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3192
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3193 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3246
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3247 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3295
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 122/275 (44%), Gaps = 37/275 (13%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE++ WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 I----FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
A G S A+T G++ +WG G GRLGHG S E P L+
Sbjct: 548 KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIPMLV 598
Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
E +V CG + LT G++Y+WG +N LG G
Sbjct: 659 EVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 113/254 (44%), Gaps = 17/254 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G + G+LG P + L+ EVV ++ G
Sbjct: 4047 AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD-RPRVVESLRGIEVVDVAAGGA 4105
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
HS+ +T G+LY WGK G+LG ++ P VE L G A G Q++
Sbjct: 4106 HSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEVLQGHRVVDVACGSGDAQTLC 4163
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4164 LTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMKIESLTGLGVVKVECGSQFSV 4214
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ +H RRP + L + + G H T GE+
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4274
Query: 310 YTWGSNENGCLGIG 323
YTWG N+ G LG G
Sbjct: 4275 YTWGDNDEGQLGDG 4288
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 142/301 (47%), Gaps = 22/301 (7%)
Query: 32 SSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTET 89
SS R +WG D +LG G S+ + P ++ +A GG+ +LF +T
Sbjct: 2956 SSAAVRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVE 3013
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
G VYA G G+LG+ + G P +I+ L VV+ + +G H++A+TVDG+++
Sbjct: 3014 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3073
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG+ +G+LG + P +E L + A G S A+T G++ +WG G
Sbjct: 3074 WGEGDDGKLGHFSRMN--CDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEY 3131
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD 264
GRLGHG +T++ P+++K L G +V A G + + + G V+ +GD
Sbjct: 3132 GRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3182
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
K+ P I +L ++ CG + LT G ++TWG + LG
Sbjct: 3183 GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3242
Query: 323 G 323
G
Sbjct: 3243 G 3243
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3961 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4018
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ ++K V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4019 GRLGIGGTESVSAPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4076
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P VE L GI A G S VT G + +WG G GRLGH
Sbjct: 4077 HGSRSP--CDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4131
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4132 ------SEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4186 SDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4236
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G S+A+ ++++WG N QLG G K +K I +P+ E LS + Q A G +
Sbjct: 2951 SAGLESSAAVRT--KVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKS 3006
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AG 246
AVT GKV + G +GRLG G L S + PR I L VK A +G
Sbjct: 3007 LFAVTVEGKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSG 3058
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLT 304
H+ + +G+V+ +G+ K+ + +P LI L ++ CG H+ LT
Sbjct: 3059 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALT 3118
Query: 305 SGGELYTWGSNENGCLGIG 323
S GELYTWG E G LG G
Sbjct: 3119 SSGELYTWGLGEYGRLGHG 3137
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4014
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F ++ A+ G + +A++ G+V SWG G+
Sbjct: 4015 YGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4074
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+++ L G++V AAG HSAC+ G +Y +G
Sbjct: 4075 LGHGSRSPC---------DRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4126 RLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4184
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 50/120 (41%), Gaps = 19/120 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
F L +++ EP + GL K +V I+ G S + W S +GL
Sbjct: 742 HFDTLRVTKP-----EPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGL 787
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 4277 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318
>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 962
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 140/297 (47%), Gaps = 35/297 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
WG GRLG G P + F+ +++ CG HT +T +G +YA G D
Sbjct: 328 WGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNA 387
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG+ + +P+RI G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 388 GLLGLGSGASH-WKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHG 446
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
+ + IP +VE L+G T + A G S AV + GK+ +WG G G+LGH
Sbjct: 447 DRIS--TNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGH 504
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
G +S L P + EL+ + A G + + +G+VY G D + D
Sbjct: 505 GDIASRL---------IPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSQDD 555
Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ R PS I + +EV CG +H VL S E+YTWG NG LG G
Sbjct: 556 VV-------RAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHG 605
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 135/277 (48%), Gaps = 35/277 (12%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+GD+ G LGLGS S W+PV + E +++ ++CG HT F+T G ++ G
Sbjct: 380 WGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGT 439
Query: 100 FGQLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI-------TVDGELYMWG 148
FG LG IS NI +E L +G + ++ + G HS+A+ + G+L+ WG
Sbjct: 440 FGALGHGDRISTNIPREVEAL--NGCR--TIRTACGVWHSAAVVSVFGEASSSGKLFTWG 495
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+G+LG G A+++IP+ V L +Q A G +VA++ G+V + G
Sbjct: 496 DGDDGKLGHGDIASRLIPL--SVTELDTTSFQQVACGQSITVALSMSGQVYAMGTA---- 549
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+ S +R+ S L K V+ A G+ H A ++ VY +G +
Sbjct: 550 -----DPSQDDVVRAPSCIEGGLGKSF----VQEVACGYHHIAVLNSKAEVYTWGKGSNG 600
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
++ + + R P+L+ L + +VVCG +T +
Sbjct: 601 QLGHGDTEYRRMPTLVKALKGKQVRKVVCGSNYTATI 637
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+ IS G +++ +T G+LY WG+ S G+LG G +P P ++ G + A
Sbjct: 305 DAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHG--VCSYVPHPKLIDEFDGSTVELAD 362
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP-RLIKELEGVKVKI 242
G + AVT G + +WG G + +LG S + P R++ ++EG+ V+
Sbjct: 363 CGEFHTCAVTTSGDLYAWGDG-------DHNAGLLGLGSGASHWKPVRILGQMEGINVRT 415
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV-------- 294
+ G H+A + G+++ FGD F H R S + +P E +
Sbjct: 416 ISCGPWHTAFVTSAGKLFTFGDGT-----FGALGHGDRIS--TNIPREVEALNGCRTIRT 468
Query: 295 -CGGYHTCVL-------TSGGELYTWGSNENGCLGIG 323
CG +H+ + +S G+L+TWG ++G LG G
Sbjct: 469 ACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGHG 505
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P ++ + + + G +V VT G++ SWG GRLGHG S +
Sbjct: 294 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPH------- 346
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
P+LI E +G V++A G H+ + +G +Y +GD + L G+ A +
Sbjct: 347 --PKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 404
Query: 287 LPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L E + CG +HT +TS G+L+T+G G LG G
Sbjct: 405 LGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHG 446
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H + TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A++ DG+LY WG N+ GQ+G G A + P P
Sbjct: 114 QGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL G A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP + L GV + A G+ H+ + + G +Y +G ++ GN + + S + +
Sbjct: 223 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPVQIM 280
Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
E VV C HT T G++Y WG
Sbjct: 281 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E V V+IAA H SA ++G+VY++G
Sbjct: 276 PV--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P++I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 265 LG-TGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFACTDDVF 333
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++ ++K V T + + IT + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEVASIRKACV-FGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 69
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G K ++L + V T G+V +WG G +LG+G + + ++ T
Sbjct: 70 ALCG--KKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVC---TN 124
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
LIK KV A G HS + +G +Y +G ++ + P +S
Sbjct: 125 LLIK-----KVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQ 179
Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ VV CG + + S GE+Y WG N NG LG+G
Sbjct: 180 GKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLG 216
>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
Length = 841
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 135/299 (45%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E P + + ++ +ACG HT +T TG +Y G ++
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + G+ + P RISG V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ I P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + C+ +G+V G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327
Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + R P L+ E +V CG YH VLT E++TWG NG LG G
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHG 386
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G ESR +P ++ + +ACG + T+ LT +G V + G + +GQ
Sbjct: 271 WGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQ 330
Query: 103 LGISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G L RI+G + V+Q++ G +H + +T E++ WGK +NG+LG G
Sbjct: 331 LGNPNSDGRLPCLVEDRIAG--EHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDI 388
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT+VE L + A G + A+
Sbjct: 389 EDR--KVPTQVEALKDRAVRHIACGANFTAAI 418
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +G+++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV--HPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG ++ + P+
Sbjct: 126 LAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDA---------GHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I L+G+ V + G H+A I G+++ FGD + + P + L
Sbjct: 177 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGL 236
Query: 289 YSEEVVCGGYHTCVL-----------TSGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHG 282
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 412 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 471
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 472 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 529
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 530 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 586
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 587 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 639
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 640 RPRLVAALQGKKVNRVACGSAHT 662
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 372 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 430
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 431 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 488
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 489 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 539
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 540 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 599
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 600 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 633
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 306 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 363
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 364 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 421
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 422 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 476
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 477 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 530
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 531 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 581
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 301 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 359
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 360 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 419
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 420 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 470
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 471 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 529
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 570 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 629
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 630 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 664
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 47/180 (26%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSI--------LGFLR------------------ 222
+++ G G + WG G+LG + + + L LR
Sbjct: 294 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 353
Query: 223 -----------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFG 263
+ S TP L++ ++ V +K A +G H + G VY +G
Sbjct: 354 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 413
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 414 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 473
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 139/278 (50%), Gaps = 21/278 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN G+LG G+ ++R PV + + A A G H+L L G V+A G N +GQL
Sbjct: 11 GNNGSGQLGDGTRDNRSTPVQVLGLSE--VVAAAAGSIHSLALRNDGTVWAWGYNGYGQL 68
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
G + ++G EP+++ GL V + G++HS A+ DG ++ WG N NGQLG G +
Sbjct: 69 G-NGSLGSRAEPVQVQGLSGG-VSVDAGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRR 126
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
++P+ +V+ LS + A G S+A+ G V +WGA SG+LG G +
Sbjct: 127 LVPV--QVQGLSEVVAVTA--GSSHSLALRSDGTVWAWGANASGQLGEGT---------T 173
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
T+ P + L +V AG HS + +G V+ +G A ++ +G +R
Sbjct: 174 TNRLVPVPVLGLS--EVVAVEAGSSHSLALRSDGTVWAWGANASGQL--GDGTTTKRLVP 229
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L + G ++ + + G ++ WG N +G LG
Sbjct: 230 VQVLSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLG 267
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 136/283 (48%), Gaps = 25/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + + A+ G +H+L L G V+A G N GQ
Sbjct: 110 WGDNPNGQLGEGTTTRRLVPVQVQGLSE--VVAVTAGSSHSLALRSDGTVWAWGANASGQ 167
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+ + GL EVV + G HS A+ DG ++ WG N++GQLG G
Sbjct: 168 LGEGTTTNR-LVPVPVLGL-SEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTK 225
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P V+ LSG+ +A G+ S+AV G V +WG SG+LG + ++
Sbjct: 226 RLVP----VQVLSGVVAMEAGSGY--SLAVRNDGTVWAWGYNFSGQLG---DDTV----- 271
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
TS TP + L +V AAG S + +G V+ +G D EG + R
Sbjct: 272 -TSRSTPVQVLGLS--EVVAVAAGSSLSLALRSDGTVWAWGSN--DYGQRGEGTTSNRAF 326
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P L V G H+ + S G ++ WGSN +G LG G
Sbjct: 327 PVQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEG 369
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 133/281 (47%), Gaps = 21/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG GSL SR PV ++ G H+L + + G V+A G N GQ
Sbjct: 60 WGYNGYGQLGNGSLGSRAEPVQVQGLSGG--VSVDAGHYHSLAVRDDGTVWAWGDNPNGQ 117
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL EVV ++ G HS A+ DG ++ WG N++GQLG G
Sbjct: 118 LGEGTTT-RRLVPVQVQGLS-EVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEGTTTN 175
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+P V LS + +A G S+A+ G V +WGA SG+LG G
Sbjct: 176 RLVPVP--VLGLSEVVAVEA--GSSHSLALRSDGTVWAWGANASGQLGDGT--------- 222
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P ++ L GV A +G+ S + +G V+ +G ++ P
Sbjct: 223 TTKRLVP--VQVLSGVVAMEAGSGY--SLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPV 278
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L V G + L S G ++ WGSN+ G G G
Sbjct: 279 QVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEG 319
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 135/283 (47%), Gaps = 23/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG ++ SR PV + + A+A G + +L L G V+A G ND+GQ
Sbjct: 258 WGYNFSGQLGDDTVTSRSTPVQVLGLSE--VVAVAAGSSLSLALRSDGTVWAWGSNDYGQ 315
Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G + N + P++ GL V ++ GY HS A+ DG ++ WG N++GQLG G
Sbjct: 316 RGEGTTSNRAF---PVQARGLSGGVA-VAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTT 371
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P+ +V+ LSG+ A G S+A+ G V +WG+ SG+LG G
Sbjct: 372 SNRSEPV--QVQGLSGVVAVSA--GASSSLAIRSDGTVWAWGSNASGQLGDGT------- 420
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P ++ L GV +A F S + +G V+ +G ++
Sbjct: 421 --TTDRLVPVQVQGLSGVVAVVAGTSF--SLAVRNDGTVWGWGYNGYGQLGTFTSLFVLV 476
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ L V G H+ + S G ++ G N+NG LG G
Sbjct: 477 PVQVTGLSGVVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDG 519
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 136/284 (47%), Gaps = 24/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + A+ G + +L + G V+ G N +GQ
Sbjct: 408 WGSNASGQLGDGTTTDRLVPVQVQGLSG--VVAVVAGTSFSLAVRNDGTVWGWGYNGYGQ 465
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ + L P++++GL VV ++ G HS A+ DG ++ G+N NGQLG G
Sbjct: 466 LGTFTSL-FVLVPVQVTGLSG-VVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTN 523
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LSG+ + A G S+AV G V +WG G+LG G F R
Sbjct: 524 RSAPV--QVTGLSGVVS--VAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSW-----FQR 574
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
S P + L G + +AA+ +S + +G V+ +G ++ +G +
Sbjct: 575 S----APVQVTGLSG-RGSVAASSD-YSMAVRYDGTVWAWGFNLYGQL--GDGTTSSNQL 626
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +L V G H+ L S G ++TWG N G LG G
Sbjct: 627 VPVQVQQLRGVVAVEVGSSHSLALRSDGTVWTWGYNSFGQLGNG 670
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 113/236 (47%), Gaps = 21/236 (8%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G V+A G N GQLG S P+++ GL EVV + G HS A+ DG ++ WG
Sbjct: 5 GTVWAAGNNGSGQLGDGTRDNRS-TPVQVLGLS-EVVAAAAGSIHSLALRNDGTVWAWGY 62
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG G ++ P+ +V+ LSG + A G S+AV G V +WG +G+L
Sbjct: 63 NGYGQLGNGSLGSRAEPV--QVQGLSGGVSVDA--GHYHSLAVRDDGTVWAWGDNPNGQL 118
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G +T P ++ L +V AG HS + +G V+ +G A +
Sbjct: 119 GEGT---------TTRRLVPVQVQGLS--EVVAVTAGSSHSLALRSDGTVWAWGANASGQ 167
Query: 270 MLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ EG R + L SE V G H+ L S G ++ WG+N +G LG G
Sbjct: 168 L--GEGTTTNRLVPVPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDG 221
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 130/283 (45%), Gaps = 25/283 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R PV + + A+ G +H+L L G V+A G N GQ
Sbjct: 160 WGANASGQLGEGTTTNRLVPVPVLGLSE--VVAVEAGSSHSLALRSDGTVWAWGANASGQ 217
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ VV + G +S A+ DG ++ WG N +GQLG +
Sbjct: 218 LGDGTTT-KRLVPVQV---LSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTS 273
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LS + A G S+A+ G V +WG+ G+ G G S
Sbjct: 274 RSTPV--QVLGLSEVVA--VAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTS------- 322
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
+ P + L G V + AAG+ HS + +G V+ +G A ++ EG + R
Sbjct: 323 --NRAFPVQARGLSG-GVAV-AAGYAHSLAVRSDGTVWAWGSNASGQL--GEGTTSNRSE 376
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V G + + S G ++ WGSN +G LG G
Sbjct: 377 PVQVQGLSGVVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDG 419
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 21/186 (11%)
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
DG ++ G N +GQLG G + + P+ +V LS + AA G S+A+ G V +
Sbjct: 4 DGTVWAAGNNGSGQLGDGTRDNRSTPV--QVLGLSEVVA--AAAGSIHSLALRNDGTVWA 59
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRV 259
WG G G+LG+G L S +E P ++ L GV V AG HS + ++G V
Sbjct: 60 WGYNGYGQLGNGS-------LGSRAE--PVQVQGLSGGVSVD---AGHYHSLAVRDDGTV 107
Query: 260 YIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +GD ++ EG RR P + L V G H+ L S G ++ WG+N +
Sbjct: 108 WAWGDNPNGQL--GEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANAS 165
Query: 318 GCLGIG 323
G LG G
Sbjct: 166 GQLGEG 171
>gi|421100544|ref|ZP_15561167.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200901122]
gi|410796347|gb|EKR98483.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii str. 200901122]
Length = 506
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 138/299 (46%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRTAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
+ G N+ GQLG N +S+ P+ + GLK +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VSFGQNNVGQLGNGANDLNADSFSMNPVAVVGLK-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A P KVE LSGI KQ A G + +A+ GK+ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAAQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L + AG S I ++G V +G +
Sbjct: 377 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H VL GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 122/263 (46%), Gaps = 26/263 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L GGAH+ FL + G VY TG N+FGQLG + G + + + I ++
Sbjct: 131 LGAGGAHSGFL-KNGEVYTTGRNNFGQLGTGNSTGDDNNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIPIPTKVECLSGIFTKQAALG 185
S AI +G +Y WG N+ GQLG+G + A P PT V + A G
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQP-PTLVPGIDDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAA 244
F ++ + G V+S+G G+LG+G L + S P + L+ V IA
Sbjct: 247 FNHALILKSDGTVVSFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLKDVIQVIA- 300
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
G HSA + ENG VY++G + N A+ P + L +++ G H
Sbjct: 301 -GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEGLSGIKQIANGRDHI 359
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L S G++Y+WG N +G LGIG
Sbjct: 360 LALASDGKIYSWGLNASGQLGIG 382
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 21/217 (9%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-VIPIPTKVECL 174
L+KEV ++ G HS + +GE+Y G+N+ GQLG G + K+ +
Sbjct: 119 LQKEVNFYFGTKLGAGGAHSGFLK-NGEVYTTGRNNFGQLGTGNSTGDDNNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
S IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ + P L
Sbjct: 178 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQPPTL 233
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ ++ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 VPGID--DAVMGAYGFNHALILKSDGTVVSFGQNNVGQLGNGANDLNADSFSMNPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 292 LKDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNG 328
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 72/177 (40%), Gaps = 11/177 (6%)
Query: 42 LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L ++ PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAAQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P+ L + G S +I GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+G+ + P K + GI G + + G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 488
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + L +A GGAH+ +T G +Y G +G+
Sbjct: 4069 WGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4128
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4129 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4186
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4187 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4243
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4244 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4296
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L+ L V CG HT
Sbjct: 4297 RPRLVPALQGKKVNRVACGSAHT 4319
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3298
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + +P+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAVPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAVP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3080
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3139
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3248
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 3296
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAV-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4029 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4087
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ E+V ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4088 PRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4145
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4146 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4196
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4197 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4256
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4257 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4290
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VVQ++ G A+TV+G++Y G+ +NG+LGLG + V PIP +V LS K+ A+
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTV-PIPRQVTALSSYVVKKVAV 3056
Query: 185 --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G + A+T GKV SWG G G+LGH F R + PRLI+ L+ +++
Sbjct: 3057 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 3107
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY-- 298
A G HSA + +G +Y +G ++ + +P ++ L +V CG
Sbjct: 3108 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
T LT G +++WG + G LG G
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRG 3192
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3963 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4020
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4021 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4078
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4079 HGNRSP--CDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4133
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4134 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4187
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4188 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4238
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3232 TWGKGDYFRLGHG 3244
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
I +P+ E LS + Q A G + AVT GKV + G +GRLG G S + R
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQV 3043
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
+ + ++K KV + + G H+ + +G+V+ +G+ K+ + +P LI
Sbjct: 3044 TALSSYVVK-----KVAVHSGG-RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3097
Query: 285 SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L ++ CG H+ LTS GELYTWG E G LG G
Sbjct: 3098 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3138
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3958 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4016
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4017 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4076
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G+++ AAG HSAC+ G +Y +G
Sbjct: 4077 LGHGNRSPC---------DRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYG 4127
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4128 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4186
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4227 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4286
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P + L+ K+V +++ G H+ A
Sbjct: 4287 LGDGTTNAIQ-RPRLVPALQGKKVNRVACGSAHTLA 4321
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 19/120 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
F L +++ EP + GL K +V I+ G S + W S +GL
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGL 787
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3956 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4015
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4016 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4075
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4076 KLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4130
>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
Length = 576
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 122/235 (51%), Gaps = 11/235 (4%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
++CG H++ + G V+A G GQLGI E S P +I L +++Q+S G++H
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 65
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A++ DG ++ WG+NS GQLGLGK ++ IP KV+ L GI Q A G S A++
Sbjct: 66 SLALSEDGHVFSWGRNSEGQLGLGKN-SRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 124
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G WG+ SG+L ++ G Y P I L+ + V + G+ H+A +
Sbjct: 125 TGTSFGWGSNRSGQL------ALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLT 178
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYSEEVVCGGYHTC--VLTSG 306
E G+V+ FG + ++ + R P LI + ++ C YHT V T+G
Sbjct: 179 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTG 233
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G HS A+ G+++ WG S GQLG+G+ ++ +PTK++ L+GI Q + G
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHY 64
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S+A++ G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG
Sbjct: 65 HSLALSEDGHVFSWGRNSEGQLGLGK--------NSRSQAIPQKVKSLEGIPLAQVAAGG 116
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTC 301
HS + G + +G ++ GN + +P I L + CG HT
Sbjct: 117 THSFALSLTGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTA 175
Query: 302 VLTSGGELYTWGSNENGCL 320
VLT G+++T+G N +G L
Sbjct: 176 VLTEEGQVFTFGGNSSGQL 194
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 25 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 84
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 85 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 144
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 145 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 204
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 205 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 239
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+ +
Sbjct: 9 GKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQVS 60
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGYH 299
G HS + E+G V+ +G + ++ G ++R ++ K+ E +V GG H
Sbjct: 61 CGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGTH 118
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
+ L+ G + WGSN +G L +
Sbjct: 119 SFALSLTGTSFGWGSNRSGQLAL 141
>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Hydra magnipapillata]
Length = 731
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 47/256 (18%)
Query: 43 WGNGDYGRLGLGSLESRWR--------PVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WG Y +LG +L+ + P ++ + CG HTLFL+ G VYA
Sbjct: 6 WGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFLS-GGLVYA 64
Query: 95 TGLN-------------------------DFGQLGISENIGYSLEPLRISGLKK-EVVQI 128
+GLN +FGQ+GI+ + P + L ++QI
Sbjct: 65 SGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPIIQI 124
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
G HHS A+T+ G ++ WGKNS GQLGLG + ++ PTK++ ++G + + G E
Sbjct: 125 CAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRL--FPTKIQSMNGKHVRYISCGEEH 182
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
SV +T G+V ++G G SG+LGH + ++ P+++ +L G V A G
Sbjct: 183 SVLLTSAGRVYTFGCGSSGQLGHNE---------FEDQFIPKMVVDLMGTPVTQIACGRK 233
Query: 249 HS-ACIDENGRVYIFG 263
H+ A + + ++Y FG
Sbjct: 234 HTLAHVMKGNKLYSFG 249
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG + R P + ++ ++CG H++ LT G VY G GQ
Sbjct: 143 WGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLLTSAGRVYTFGCGSSGQ 202
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKA 161
LG +E + + + + V QI+ G H+ A + G +LY +G N GQLG+G
Sbjct: 203 LGHNEFEDQFIPKMVVDLMGTPVTQIACGRKHTLAHVMKGNKLYSFGLNVKGQLGIGSYE 262
Query: 162 AKVIPIPT 169
IP+ T
Sbjct: 263 KARIPMLT 270
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 40/210 (19%)
Query: 144 LYMWGKNSNGQLGLGKKAAK--------VIPIPT---------KVEC-------LSGIFT 179
+Y WG N+ QLG K P P K+ C LSG
Sbjct: 3 MYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFLSGGLV 62
Query: 180 KQAALGFEQSVAVTG------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ L ++ + ++ G V SWG+ G++G + F + S P+L++
Sbjct: 63 YASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSK-----FHKYVS---PQLVR 114
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSE 291
+L + AG HS + +G ++ +G + ++ + P+ I + +
Sbjct: 115 DLSNCPIIQICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVR 174
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ CG H+ +LTS G +YT+G +G LG
Sbjct: 175 YISCGEEHSVLLTSAGRVYTFGCGSSGQLG 204
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3815 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3874
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3875 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3932
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3933 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3989
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3990 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4042
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4043 RPRLVAALQGKKVNRVACGSAHT 4065
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2823 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2882
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2883 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2940
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2941 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2997
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 2998 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3046
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3047 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3078
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 121/247 (48%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D +LG + + EP IS K VV I+ G +
Sbjct: 481 GHHYLALAATGEVYSWGCGDGRRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 539
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 540 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 597
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 598 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 648
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 649 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 708
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 709 SWGSNDQ 715
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2769 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2828
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2829 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2887
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2888 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2941
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2942 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2996
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 2997 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3044
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3775 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3833
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3834 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3891
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 3892 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3942
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3943 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4002
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4003 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4036
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD RLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 496 WGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 554
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 555 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 613
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 614 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 671
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
+ P+L++ L+G KV AAG H + E+ V+ +G + D +
Sbjct: 672 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 722
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+ A P L +K + + CG + ++G Y W
Sbjct: 723 RVTKPEPAALPGLDTK--HIVGIACGPAQS---SAGSSXYEW 759
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 122/278 (43%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L + G V N +L P + GL
Sbjct: 419 PIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYN-----------SDTLVPQLVQGL 467
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ VV+I+ + HH A+ GE+Y WG +LG G +P+ P + SG
Sbjct: 468 ASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGD----TVPLEEPKVISAFSG 523
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 524 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 571
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 572 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 632 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 669
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2751 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2810
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2811 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2868
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2869 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2920 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2979
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2980 TWGKGDYFRLGHG 2992
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 130/289 (44%), Gaps = 21/289 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG P C A L G L +T G +YATG G+
Sbjct: 3709 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGYGAGGR 3768
Query: 103 LGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG G
Sbjct: 3769 LGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 3826
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3827 NRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD----- 3879
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+ +
Sbjct: 3880 ----SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3935
Query: 277 HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P I L +V CG + LT G +YTWG + LG G
Sbjct: 3936 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3984
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 2816
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 2817 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2876
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 2877 LGEYGRLGHG 2886
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3704 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATG 3762
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3763 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3822
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3823 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3873
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3874 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3932
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 606 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 665
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 666 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 722
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAG 204
+ K P L G+ TK A G QS A G W G
Sbjct: 723 RVTKPEP-----AALPGLDTKHIVGIACGPAQSSA---GSSXYEWSMG 762
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3973 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4032
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4033 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4067
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLG------------------------HGQESSIL-----GFLRST 224
G G + WG G+LG G E ++L G L +T
Sbjct: 3702 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYAT 3761
Query: 225 --------------SEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 3762 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3821
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 3822 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3876
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H ++K ++ HTL T G V++ G D
Sbjct: 438 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 496
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A++ DGELY WG+ G+LG G
Sbjct: 497 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 556
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IP T V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 557 DSNSRNIP--TLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 612
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++++ L+G+ ++ AG S + G+VY +G A E
Sbjct: 613 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 662
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + ++ G H L+ E+Y WG+N G G G
Sbjct: 663 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 710
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 120/243 (49%), Gaps = 18/243 (7%)
Query: 86 LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 378 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAATFADAQTIEAGQYCTFVISSDGS 433
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
+ GK S G+LGLG + E I ++ G + ++A T G+V SWG
Sbjct: 434 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWG 493
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGHG S T +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 494 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYT 544
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCL 320
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG L
Sbjct: 545 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 604
Query: 321 GIG 323
G G
Sbjct: 605 GHG 607
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 596 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 653
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L VV IS G H A++ D E+Y WG NS GQ G G
Sbjct: 654 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 713
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L G+ +Q + G S+A T +V++W
Sbjct: 714 GPITK-PKKVVGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 755
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 545 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 602
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + L+ + ++ G S A+T G++Y WG LG G
Sbjct: 603 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 659
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 660 EATAL-RPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 711
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+GV ++ +AG HS
Sbjct: 712 --STGPITKPKKVVGLDGVAIQQISAGTSHS 740
>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
Length = 228
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Query: 43 WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G++G+LGL + P + +ACG +HTL LT +G VY+ G
Sbjct: 4 WGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG LG S + S +VQI+ G +HS A+TV+G+L+ WG+ GQLG G
Sbjct: 64 FGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS 123
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+P V LS Q G + ++A+ G++ SWG G G+ GHG + +IL
Sbjct: 124 VENHLQPVP--VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNIL- 180
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
P+L+ LE + A+AG H+ + G VY +GD ++L
Sbjct: 181 --------VPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVL 224
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 16/228 (7%)
Query: 96 GLNDFGQLGISENIGYSLEPL-RISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSN 152
G +FGQLG+ + G PL R +E+ V+++ G H+ A+T G++Y +G+ +
Sbjct: 5 GCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTF 64
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G LG G + P+ V+ L G+ Q A G S A+T G++ SWG G G+LG G
Sbjct: 65 GALGHGTTESCSSPV--IVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCG 122
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ L + T+ + RL+ ++ G ++ ID +G+++ +G +
Sbjct: 123 SVENHLQPVPVTA-LSDRLLTQV--------VCGADYTMAIDSDGQLFSWGHGHWGQTGH 173
Query: 273 QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
++ P L+ L + G H LTSGG +Y WG NE G
Sbjct: 174 GTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQG 221
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVI--PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
L WG GQLGL K AA V P+P + + + A G ++A+TG G V S+
Sbjct: 1 LVSWGCGEFGQLGL-KDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSF 59
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G LGHG S +P ++ L G+ + A G HS + G+++
Sbjct: 60 GQGTFGALGHGTTESC---------SSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFS 110
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G ++ + +P ++ L +VVCG +T + S G+L++WG G
Sbjct: 111 WGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQ 170
Query: 320 LGIG 323
G G
Sbjct: 171 TGHG 174
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4064 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4123
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4124 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4181
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4182 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4238
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4239 -------RRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ 4291
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4292 RPRLVAALQGKKVNRVACGSAHT 4314
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3070 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3129
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3130 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3187
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3188 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3244
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3245 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3293
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3294 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3325
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3016 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3075
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3076 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3134
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3135 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3188
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3189 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3243
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3244 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 3291
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4024 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4082
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4083 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4140
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4141 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4191
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4192 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4251
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H + GE+YTWG N+ G LG G
Sbjct: 4252 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4285
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2998 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3057
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3058 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3115
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3116 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3166
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3167 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3226
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3227 TWGKGDYFRLGHG 3239
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 135/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3958 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4015
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4016 GRLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4073
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 4074 HGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4128
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4129 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4182
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4183 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4233
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2952 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3009
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3063
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3064 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3123
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3124 LGEYGRLGHG 3133
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 93/239 (38%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3953 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4011
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4012 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4071
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G +V AAG HSAC+ G +Y +G
Sbjct: 4072 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4122
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4123 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4181
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 19/120 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
F L +++ EP + GL K +V I+ G S + W S +GL
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGL 787
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 4274 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4315
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3951 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4010
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4011 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4070
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L +E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4071 KLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4125
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 136/265 (51%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3139 WGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3198
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L+ VVQ++ G + +T DG ++ WG G+LG G
Sbjct: 3199 LGHGDNC-TQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRG- 3256
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +V+ L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3257 -GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHV-- 3313
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P I+ L G KV A G LH + ++G+VY +GD D GN
Sbjct: 3314 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN--DHGQQGSGNTIV 3364
Query: 279 -RRPSLISKLP--YSEEVVCGGYHT 300
++PSL+ L + V CG H+
Sbjct: 3365 NKKPSLVLGLDGIFVNRVACGSSHS 3389
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ +S RP + + + +ACG AH+ +T G V G +G+
Sbjct: 4200 WGEGEDGKLGHGNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGR 4259
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4260 LGHGDSED-QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4317
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4318 -GSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHV-- 4374
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4375 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQ 4427
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L+ L + +V+CG HT L++
Sbjct: 4428 RPRLVQSLQGKHIVKVICGSAHTLALST 4455
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 127/287 (44%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H + LT G V++ G + G
Sbjct: 3086 GEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3145
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3146 KLGHGNRLTLE-KPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3204
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L Q A G Q++ +T G V SWG G G+LG G
Sbjct: 3205 CTQLKP--KLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGG----- 3257
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P + L GV V G S + + G V+ +G ++ H
Sbjct: 3258 ----SEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHV 3313
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+ I L + V G H +T G++Y WG N++G G G
Sbjct: 3314 RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG 3360
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 120/270 (44%), Gaps = 21/270 (7%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--R 117
P + + + +K +A GG H L L+ G V++ G + G+LG Y L
Sbjct: 4165 PTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIES 4224
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
+SG+ VV I+ G HS+ IT+ G + WGK G+LG G ++ P VE L G
Sbjct: 4225 LSGIG--VVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQL--QPKLVEALLGY 4280
Query: 178 FTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
A G Q++ +T V SWG G G+LG G S P I+ L
Sbjct: 4281 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG---------SDGCKVPMKIESL 4331
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EV 293
G+ V G S + +G VY +G ++ +H RRP ++ L + +
Sbjct: 4332 AGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISI 4391
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H + GE++TWG N+ G LG G
Sbjct: 4392 ATGSLHCVACSDAGEVFTWGDNDEGQLGDG 4421
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 25/292 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P S + LK + GG+ +LF+ ++ G +YA G
Sbjct: 3032 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 3088
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ N P ++ L + VV+ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 3089 TNGRLGLGHNNNVP-TPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3147
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3148 GHGNRL--TLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3203
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
+ ++ P+L+ L+ +V A G + C+ E+G V+ +GD K+
Sbjct: 3204 -------NCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRG 3256
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +L ++ CG + LT GE++TWG + LG G
Sbjct: 3257 GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHG 3308
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 141/291 (48%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A +A GG TL+ +T G +YATG
Sbjct: 4094 WGHNHRGQLG-GLDGSRIKNPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4151
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + +E L+ +KK V +++G H A++ DGE++ WG+ +G+LG
Sbjct: 4152 GRLGVGGTDSVTTPTLVESLQHVMIKK--VAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4209
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P +E LSGI A G S +T G VL+WG G GRLGHG
Sbjct: 4210 HGNRDS--YDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGD--- 4264
Query: 217 ILGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4265 ------SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4318
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4319 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4369
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 21/227 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ++ P +A + + CG +++ +T +G +Y G +G+
Sbjct: 633 WGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGR 692
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N P ++ LK VV ++ G HS +T G + WG G+LG
Sbjct: 693 LG-HGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNES 751
Query: 160 KAAKVIPIPT---KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+P+ + C+ +F+ G + SVA+T G V +WG G GRLGHG
Sbjct: 752 CVGTSVPVQVDLPQASCVVKVFS-----GSQFSVALTREGTVYTWGKGHGGRLGHGN--- 803
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S P++++ LEG K+ A G H + +G +Y +G
Sbjct: 804 ------SEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWG 844
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 111/247 (44%), Gaps = 17/247 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH 133
A C G H L L +G VY+ G D G+LG + L P RI+ L ++V + G
Sbjct: 613 AAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKEL-PTRIAALADRQVTGVFCGSS 671
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
+S+AIT GELY WG+ + G+LG G K +PT V L ALG S+
Sbjct: 672 YSAAITASGELYTWGRGTYGRLGHGNSEDKY--VPTLVTALKAHRVVHVALGCGDAHSLC 729
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
VT G +WG G G+LG+ ES + P + + V +G S
Sbjct: 730 VTEAGLAFAWGDGDFGKLGN--ESCV-------GTSVPVQVDLPQASCVVKVFSGSQFSV 780
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ G VY +G ++ H+ P ++ L + ++ G H LT+ GEL
Sbjct: 781 ALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGEL 840
Query: 310 YTWGSNE 316
Y WG N+
Sbjct: 841 YGWGRND 847
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 111/244 (45%), Gaps = 24/244 (9%)
Query: 90 GCVYATGLNDFGQ-LGISENIGYSLE--PLRISGLKKEVVQISTGYH--HSSAITVDGEL 144
CVY L D G L +S I + + P ++ GL+ +VQ++ H A+ G++
Sbjct: 573 NCVYI--LTDSGTVLYLSHAISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALASSGDV 630
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y WG G+LG G +AK +PT++ L+ G S A+T G++ +WG G
Sbjct: 631 YSWGSGDGGRLGHGDTSAK--ELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRG 688
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIF 262
GRLGHG S +Y P L+ L+ +V A G HS C+ E G + +
Sbjct: 689 TYGRLGHGN---------SEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAW 739
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGC 319
GD K+ + P + LP + VV G + LT G +YTWG G
Sbjct: 740 GDGDFGKLGNESCVGTSVPVQVD-LPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGR 798
Query: 320 LGIG 323
LG G
Sbjct: 799 LGHG 802
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 27/256 (10%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQISTGYH 133
A + GGA T+F G N GQLG + + + P L + + QI+ G
Sbjct: 4082 AFSWGGASTIF--------GWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPI-QIAGGEQ 4132
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVA 191
A+T DG+LY G + G+ LG + PT VE L + K+ A+ G + +A
Sbjct: 4133 TLYAVTPDGKLYATGYGAGGR--LGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLA 4190
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
++ G+V SWG G G+LGHG S + R P+LI+ L G+ V A G HSA
Sbjct: 4191 LSSDGEVFSWGEGEDGKLGHGNRDS---YDR------PKLIESLSGIGVVDIACGSAHSA 4241
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGG 307
CI G V +G ++ + +P L+ L + ++ CG T +T
Sbjct: 4242 CITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDD 4301
Query: 308 ELYTWGSNENGCLGIG 323
+++WG + G LG G
Sbjct: 4302 NVWSWGDGDYGKLGRG 4317
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT+ G V+ G D+ +
Sbjct: 3245 WGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYR 3304
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +P I GL+ K+V+ ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3305 LGHGTD-QHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTI 3363
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V P+ V L GIF + A G SVA
Sbjct: 3364 --VNKKPSLVLGLDGIFVNRVACGSSHSVA 3391
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
V ++ +WG N QLG G K +KV +PT LS + A G + V+ GK+
Sbjct: 3026 VSSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 3083
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENG 257
+ G G +GRLG G +++ TP+ + L VK A +G H+ + +G
Sbjct: 3084 ACGEGTNGRLGLGHNNNV---------PTPKQVPILSQYVVKKVAVHSGGKHAMALTLDG 3134
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
+V+ +G+ K+ +P LI L ++ CG H+ +TS GELYTWG
Sbjct: 3135 KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3194
Query: 316 ENGCLGIG 323
E G LG G
Sbjct: 3195 EYGRLGHG 3202
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A WG+GD+G+LG S PV + + + G ++ LT G VY G
Sbjct: 735 LAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKG 794
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG N +S P + L+ K++V ++ G H A+T GELY WG+N Q +
Sbjct: 795 HGGRLG-HGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQ--I 851
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ PI T + I T L A G + L W S HG + I
Sbjct: 852 CPECVTRDPIIT-----APILTTPPTLRVAGMAA--GVAQSLFWCHSSS----HGIPAKI 900
Query: 218 LGFLRSTSEYTPRLIKEL 235
F+ SE+T RL+ +L
Sbjct: 901 -PFVVDLSEHTFRLLDQL 917
>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 688
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 139/301 (46%), Gaps = 33/301 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ E RP + + ++ +ACG HT +T TG +Y G +
Sbjct: 101 WGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNV 160
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++G+ + P RISG + +V +S G H++ IT G+L+ +G S G LG G
Sbjct: 161 GLLGHGNDVGHWI-PKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
K + P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 220 D--LKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGD 277
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
RLGHG + + L P + L A G + + +G+V G+
Sbjct: 278 KHRLGHGDKETRL---------KPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGN- 327
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
AV L + R P L+ E+V+ CG YH VLT+ E++TWG NG LG
Sbjct: 328 AVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRSEVFTWGKGANGRLGH 387
Query: 323 G 323
G
Sbjct: 388 G 388
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E+R +P + H +ACG + T+ LT +G V + G +GQ
Sbjct: 273 WGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQ 332
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + G + + ++V+QI+ G +H + +T E++ WGK +NG+LG G
Sbjct: 333 LGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRSEVFTWGKGANGRLGHGDTED 392
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT VE L + A G + A+
Sbjct: 393 R--KVPTLVEALKDRAVRYIACGANFTAAI 420
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ + +GE++ WG++S G+LG G + V P VE
Sbjct: 69 KPLE-SNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCV--RPRLVES 125
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + + P+
Sbjct: 126 LTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGND---------VGHWIPKR 176
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG++V + G H+A I G+++ FGD + + + P + L
Sbjct: 177 ISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGL 236
Query: 289 YSEEVVCGGYHTCVLT-------------SGGELYTWGSNENGCLGIG 323
+ V CG +HT + S G+L+TWG + LG G
Sbjct: 237 KTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHG 284
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHT 4316
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 3293
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4084
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4085 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H + GE+YTWG N+ G LG G
Sbjct: 4254 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4287
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3229 TWGKGDYFRLGHG 3241
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 135/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4018 GRLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 4076 HGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4235
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3126 LGEYGRLGHG 3135
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 93/239 (38%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4014 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G +V AAG HSAC+ G +Y +G
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4183
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 19/120 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
F L +++ EP + GL K +V I+ G S + W S +GL
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGL 787
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 4276 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4013 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L +E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4073 KLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 3293
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4084 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4142 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H + GE+YTWG N+ G LG G
Sbjct: 4253 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4286
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3229 TWGKGDYFRLGHG 3241
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 135/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3126 LGEYGRLGHG 3135
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 93/239 (38%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4013 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G +V AAG HSAC+ G +Y +G
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P P+ L G+ TK A G QS A
Sbjct: 747 RVTK--PEPS---ALPGLDTKHIVGIACGPAQSFA 776
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4012 GYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L +E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4072 KLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
>gi|428177897|gb|EKX46775.1| hypothetical protein GUITHDRAFT_40435, partial [Guillardia theta
CCMP2712]
Length = 312
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 126/268 (47%), Gaps = 24/268 (8%)
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI 118
RW+ VV +ACG AH L G VY+ GL G+LG+ N +P ++
Sbjct: 58 RWKRVV----------EMACGDAHNLVRCLDGSVYSWGLGSSGRLGLG-NFKSVPQPCKV 106
Query: 119 SGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
SGL +E V ++ GY+HS A+ G+L+ WG + GQLG GK + P+ + E +G
Sbjct: 107 SGLGEERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVE-EPGNGQ 165
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+ G S+ +T G + SWG G+LGHG E P+ I EL G
Sbjct: 166 RWRAVRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERC---------GRPKGISELVG 216
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVC 295
K+ + G + I +V+ +G+ ++ + +L S P V C
Sbjct: 217 TKISCFSCGPNFNVAISNGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSC 276
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
GG H L G ++ WG NE+GCLGIG
Sbjct: 277 GGRHVLGLDRKGRIWAWGCNESGCLGIG 304
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GRLGLG+ +S +P S + ++A G H+ + E G ++A G GQ
Sbjct: 84 WGLGSSGRLGLGNFKSVPQPCKVSGLGEERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQ 143
Query: 103 LGISENIGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + EP+++ G + + G +HS +T G L+ WG N++GQLG G +
Sbjct: 144 LGTGK-FESCCEPVQVEEPGNGQRWRAVRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDE 202
Query: 161 AAKVIP------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
P + TK+ C S G +VA++ G +V SWG G+LGHG +
Sbjct: 203 ERCGRPKGISELVGTKISCFS--------CGPNFNVAISNGSQVFSWGNNRYGQLGHGDK 254
Query: 215 -SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
I LRS S G V + G H +D GR++ +G
Sbjct: 255 VEQIEETLRSGS----------HGPLVLSVSCGGRHVLGLDRKGRIWAWG 294
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
VVQ++ G H+ +T G + G+N QLG G + + P P +V L + A
Sbjct: 7 HVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWKRVVEMA 66
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G ++ G V SWG G SGRLG LG +S + P + L +
Sbjct: 67 CGDAHNLVRCLDGSVYSWGLGSSGRLG-------LGNFKSVPQ--PCKVSGLGEERCVSV 117
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHT 300
AAG+ HS + E G+++ +G+ ++ + P + + + V G YH+
Sbjct: 118 AAGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAVRGGEYHS 177
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
+T G L++WG N +G LG G
Sbjct: 178 LGMTDVGSLWSWGLNNDGQLGHG 200
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G E RP S + +CG + ++ V++ G N +GQ
Sbjct: 189 WGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFNVAISNGSQVFSWGNNRYGQ 248
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + E LR V+ +S G H + G ++ WG N +G LG+G
Sbjct: 249 LGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRKGRIWAWGCNESGCLGIGDNIP 308
Query: 163 KVIP 166
++ P
Sbjct: 309 RLAP 312
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L+G Q A G + ++ +T G+VL+ G +LG G E G P+ +
Sbjct: 3 LAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAG-------PEPQQVS 55
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
L +V A G H+ +G VY +G + ++ +P +S L
Sbjct: 56 TLRWKRVVEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLGEERCV 115
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V G YH+ + GG+L+ WG+ G LG G
Sbjct: 116 SVAAGYYHSFAVMEGGKLFAWGNGTCGQLGTG 147
>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
Length = 322
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 9/260 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTC 301
L+ ++ ++ CG C
Sbjct: 281 LVERIDGLVSQIDCGRLRGC 300
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEF--------PSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L V CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLAL 215
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+ G P+L++ ++G+ +I
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQI 292
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
QAA G S+ + +VLS G G+LG + + G L P I+ LE + V
Sbjct: 27 QAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGEL-------PEPIQALETLIV 77
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGG 297
+ + G HS + GRV+ +G + ++ F+E + + + +V CG
Sbjct: 78 DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
YH+ L+ ++++WG N +G LG+G
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLG 163
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ + G ++ WG+ G LGIG
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIG 110
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4296 RPRLVAALQGKKVNRVACGSAHT 4318
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3076 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3135
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3136 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3193
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3194 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3250
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3251 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3299
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3300 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3331
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 508
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 566
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 567 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 617
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 677
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 678 SWGSNDQ 684
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 436
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 492
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 601 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 638
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3022 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3081
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3082 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3140
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3141 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3194
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3195 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3249
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3250 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3297
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 465 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 523
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 524 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 583 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 640
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 641 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4087 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4144
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4145 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4196 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3004 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3063
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3064 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3121
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3122 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3172
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3173 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3232
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3233 TWGKGDYFRLGHG 3245
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2958 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3015
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3069
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3070 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3129
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3130 LGEYGRLGHG 3139
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 521 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 581 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 640 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4126
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4127 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 634
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 635 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 686
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4285
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4286 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4320
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4075 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4129
>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
distachyon]
Length = 1068
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 139/297 (46%), Gaps = 29/297 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ S ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 286 WGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNA 345
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R+SG + +V +S G H++ IT G+LY +G + G LG G
Sbjct: 346 GLLGHGSTVSHWI-PKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHG 404
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
+ + I P +VE L G+ T + G S AV GK+ +WG G RL
Sbjct: 405 NR--ETISYPKEVESLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRL 462
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S+ L P + L +A G + + +G ++ G +V
Sbjct: 463 GHGDRSAKL---------KPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGS-SVYG 512
Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L N R P L+ EV CG YH VLT+ GE+YTWG NG LG G
Sbjct: 513 QLGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHG 569
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G++Y+WG+ S+G + G A I +P +E + A G + + +
Sbjct: 219 GDVYVWGEVMCDTTSRSGSDGNVH-GPGATTDILVPKPLESNVMLDVSYVACGVKHAALI 277
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T +V +WG SGRLGHG +SI + PRL++ L V+I A G H+
Sbjct: 278 TRQAEVFTWGEECSGRLGHGAGTSI---------FQPRLLESLSICNVEIIACGEFHTCA 328
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSG 306
+ G +Y +GD + L G+ P +S P V CG +HT ++TS
Sbjct: 329 VTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSG-PLEGLQVSTVSCGTWHTALITSS 387
Query: 307 GELYTWGSNENGCLGIG 323
G+LYT+G G LG G
Sbjct: 388 GQLYTFGDGTFGALGHG 404
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G ++ +P + ++ ACG T+ LT +G ++ G + +GQ
Sbjct: 454 WGDGDKYRLGHGDRSAKLKPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQ 513
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N G + VV+++ G +H + +T GE+Y WGK +NG+LG G A
Sbjct: 514 LGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIAD 573
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+ +PT VE L K+ A G + A++
Sbjct: 574 R--KVPTLVEALRDRSVKRIACGSSFTAAIS 602
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + +V ++ G H++ IT E++ WG+ +G+LG G A I P +E
Sbjct: 254 KPLE-SNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGHG--AGTSIFQPRLLES 310
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
LS + A G + AVT G + +WG G +G LGHG + S + P+
Sbjct: 311 LSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS---------TVSHWIPKR 361
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG++V + G H+A I +G++Y FGD + P + L
Sbjct: 362 VSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESLKGL 421
Query: 289 YSEEVVCGGYHTCVLT---------SGGELYTWGSNENGCLGIG 323
+ V CG +H+ + S G+L+TWG + LG G
Sbjct: 422 RTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHG 465
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
WG G GRLG G + R P + A S+K +ACG + T +++
Sbjct: 558 WGKGANGRLGHGDIADRKVPTLVEALRDRSVKRIACGSSFTAAISQ 603
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 126/249 (50%), Gaps = 17/249 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKK-EVVQISTGYHHSS 136
G H L +T G VY+ G N+ GQLG+ S + SL L + LK V+ S YHHS
Sbjct: 144 GAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSL--LLVESLKHVRVLSASCSYHHSV 201
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
++ DG + +G N GQLG+G + ++ +P +VE S + AA G ++ +T G
Sbjct: 202 VVSSDGSAFSFGLNDCGQLGIGTRPNQL--LPHRVELPSPHLVRLAACGQYHTIFLTEEG 259
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V S G +G+LG G SS P LI L+ + A G+ H+ + E+
Sbjct: 260 MVFSCGKNLNGQLGLGSRSST---------NVPTLIAALQERPASMIACGYSHTCVVLED 310
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
G+++ FG ++ + P + L + ++ CG + TCVL+ GEL+++G
Sbjct: 311 GKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGC 370
Query: 315 NENGCLGIG 323
N +G LG+G
Sbjct: 371 NCHGQLGLG 379
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 134/294 (45%), Gaps = 26/294 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G G LG + + + + + + +A G + FLTE G VY GLN GQL
Sbjct: 46 GQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLNSTGQL 105
Query: 104 GISENIG-------YSLEPLRISGLKKE--VVQIS--TGYHHSSAITVDGELYMWGKNSN 152
+ G YS + + GL + VVQ+S G H +T G++Y G N++
Sbjct: 106 ARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNH 165
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLGLG + K+ P VE L + A+ + SV V+ G S+G G+LG G
Sbjct: 166 GQLGLG--STKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIG 223
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ L P ++ V++AA G H+ + E G V+ G ++
Sbjct: 224 TRPNQL---------LPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGL 274
Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P+LI+ L P S + CG HTCV+ G+L+T+G N G LG+G
Sbjct: 275 GSRSSTNVPTLIAALQERPAS-MIACGYSHTCVVLEDGKLFTFGYNHQGQLGLG 327
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D G+LG+G+ ++ P H ++ ACG HT+FLTE G V++ G N GQ
Sbjct: 212 FGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQ 271
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ ++ L + ++ I+ GY H+ + DG+L+ +G N GQLGLG +
Sbjct: 272 LGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDS 331
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +VE L + + + G + ++ G++ S+G G+LG G
Sbjct: 332 --VSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGD--------- 380
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLH 249
ST P L+ + + A GF H
Sbjct: 381 STDRLVPVLVPSMTKKNLSEIACGFHH 407
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 15/259 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G ++G+LGLGS + ++ + + + + +C H++ ++ G ++ GLND GQL
Sbjct: 161 GCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQL 220
Query: 104 GISENIGYSLEPLRISGLKKEVVQIST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI L P R+ +V+++ G +H+ +T +G ++ GKN NGQLGLG +++
Sbjct: 221 GIGTRPN-QLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSS 279
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+PT + L A G+ + V GK+ ++G G+LG G S+
Sbjct: 280 --TNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSV----- 332
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+P ++ L VKV + G + + E+G ++ FG ++ + P
Sbjct: 333 ----SSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPV 388
Query: 283 LISKLPYSE--EVVCGGYH 299
L+ + E+ CG +H
Sbjct: 389 LVPSMTKKNLSEIACGFHH 407
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LGLG +S P+ + ++CG T L+E+G +++ G N GQ
Sbjct: 316 FGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQ 375
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
LG+ ++ + L S KK + +I+ G+HH AI+
Sbjct: 376 LGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412
>gi|282163157|ref|YP_003355542.1| hypothetical protein MCP_0487 [Methanocella paludicola SANAE]
gi|282155471|dbj|BAI60559.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 444
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 136/286 (47%), Gaps = 17/286 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ PV + +KA+A G +L L G V+A G N +GQ
Sbjct: 95 WGSNKYGQLGDGTYNDSAGPVQVAGLT--GVKAIAAGKDISLALKGDGTVWAWGSNSYGQ 152
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+G S N + P+++ GL + IS G H A DG ++ WG N +G LG G
Sbjct: 153 VGEGSLNYKGTAVPIQVKGLN-NIQAISAGGSHCLASQGDGAVWAWGDNRHGVLGDGTNE 211
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES----SI 217
++ P+ +K+ + G+ A ++AV G V SWG +G+LG G S
Sbjct: 212 SRFTPVRSKIYNVMGLDAGDA-----HALAVMVDGNVWSWGYNYNGQLGMGGTSLNDLGR 266
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
L F + P +++ L GVK A G HS + +NG V+ +G + ++ + G
Sbjct: 267 LSFGPEADSFNPDIVRGLSGVKS--VAVGASHSVALADNGTVWTWGSNSDGQLGVGKTGG 324
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ P +S + V G YHT L G ++ WGSN G +G
Sbjct: 325 SDMTVPVRVSGINGITAVDAGLYHTLALKDDGSVWAWGSNAEGQVG 370
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 120/258 (46%), Gaps = 7/258 (2%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
E ++ +A G H L L G V+A G N +GQLG S P++++GL V
Sbjct: 68 VEISVVRKIAAGYGHVLALKGDGTVWAWGSNKYGQLG-DGTYNDSAGPVQVAGLTG-VKA 125
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
I+ G S A+ DG ++ WG NS GQ+G G K +P +V+ L+ I + + G
Sbjct: 126 IAAGKDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQVKGLNNI--QAISAGGS 183
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+A G G V +WG G LG G S +RS Y + + + + G
Sbjct: 184 HCLASQGDGAVWAWGDNRHGVLGDGTNESRFTPVRS-KIYNVMGLDAGDAHALAVMVDGN 242
Query: 248 LHSACIDENGRVYIFGDRAVD--KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
+ S + NG++ + G D ++ F + P ++ L + V G H+ L
Sbjct: 243 VWSWGYNYNGQLGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSGVKSVAVGASHSVALAD 302
Query: 306 GGELYTWGSNENGCLGIG 323
G ++TWGSN +G LG+G
Sbjct: 303 NGTVWTWGSNSDGQLGVG 320
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 28/202 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G LG G+ ESR+ PV + L A G AH L + G V++ G N GQ
Sbjct: 197 WGDNRHGVLGDGTNESRFTPVRSKIYNVMGLDA---GDAHALAVMVDGNVWSWGYNYNGQ 253
Query: 103 LGIS----ENIGY--------SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
LG+ ++G S P + GL V ++ G HS A+ +G ++ WG N
Sbjct: 254 LGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSG-VKSVAVGASHSVALADNGTVWTWGSN 312
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
S+GQLG+GK + +P +V ++GI A G ++A+ G V +WG+ G++G
Sbjct: 313 SDGQLGVGKTGGSDMTVPVRVSGINGITAVDA--GLYHTLALKDDGSVWAWGSNAEGQVG 370
Query: 211 HGQESSILGFLRSTSEYTPRLI 232
+ RS S +P L+
Sbjct: 371 N----------RSASAGSPALV 382
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 85/208 (40%), Gaps = 25/208 (12%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
++ VV I+ S A+ DG ++ WG S+G P KVE
Sbjct: 24 VTAWSPAVVSIAASNSTSVALLDDGTVWQWGYVSDG---------VEYATPQKVEIS--- 71
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
++ A G+ +A+ G G V +WG+ G+LG G + G P + L G
Sbjct: 72 VVRKIAAGYGHVLALKGDGTVWAWGSNKYGQLGDGTYNDSAG---------PVQVAGLTG 122
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVC 295
VK AAG S + +G V+ +G + ++ N+ P + L + +
Sbjct: 123 VKA--IAAGKDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQVKGLNNIQAISA 180
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
GG H G ++ WG N +G LG G
Sbjct: 181 GGSHCLASQGDGAVWAWGDNRHGVLGDG 208
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 139/286 (48%), Gaps = 17/286 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P FE S+ A G HTLFLT+ G VY+ G ND+
Sbjct: 4 WGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDY 63
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + P +SGL ++ ++ G HS A++ GE++ WG ++ GQLG +
Sbjct: 64 GQLGHDQP---RKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLG-HQ 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P ++ L+ Q A G SVA+T G++ WGA G+LG G
Sbjct: 120 LGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGT------ 173
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ E TP + L G+ + A G H+ + ++G V+ +G ++ + +
Sbjct: 174 --ITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKK 231
Query: 280 RPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L S + CG + LT G +++ G+ G LG G
Sbjct: 232 FPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHG 277
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG +G+LGLG + + P ++ +AALG ++ +T GKV S G+
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH Q P+L+ L+ + A G +HS + G V+ +G
Sbjct: 61 NDYGQLGHDQPRK-----------RPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWG 109
Query: 264 DRAVDKMLFQEGNHAR-RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ Q G + P LI L + ++ G H+ LT+ GE++ WG+N+ G L
Sbjct: 110 SDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQL 169
Query: 321 GIG 323
G+G
Sbjct: 170 GLG 172
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 42 LWGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG D+G+LGLG++ P + +ACG HT ++++G V+ G N
Sbjct: 160 VWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNIN 219
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+++ + P ++ L+ V+ IS G S+ +T+DG ++ G GQLG G
Sbjct: 220 GQLGLNDTVSKKF-PTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGG 278
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
+ ++ +P +V L G Q + G + S+A V G+V S+
Sbjct: 279 TSNEI--LPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4067 WGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4126
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4127 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4184
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4185 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4241
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4242 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4294
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4295 RPRLVAALQGKKVNRVACGSAHT 4317
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G +VIP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEVIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3073 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3132
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3133 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3190
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3191 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3247
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3248 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3296
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3297 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3328
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 3019 GEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3077
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3078 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3136
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3191
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3192 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3245
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3246 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 3294
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 126/278 (45%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ +G VY N +L P + GL
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYN-----------SDALAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +++I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEVIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4027 ESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4085
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P + L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4086 PRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4143
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4144 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4194
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4195 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4254
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4255 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4288
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 119/231 (51%), Gaps = 25/231 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQL--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSN 152
++G+L G SE+ + P+ ++GLK +V+ ++ +G + A+T +G+++ WG
Sbjct: 579 GNYGRLGHGSSED---EVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G+LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG
Sbjct: 636 GKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E + P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 694 TEEHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3001 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3060
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3061 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3118
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3119 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3169
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3170 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3229
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3230 TWGKGDYFRLGHG 3242
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3961 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 4018
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4019 GRLGIGGTESVSTPTLLESVQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4076
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P VE L GI A G S VT G + +WG G GRLGH
Sbjct: 4077 HGNRSP--CDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4131
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4132 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4186 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4236
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2955 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3012
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G L S + PR I L VK A +G H+ +
Sbjct: 3013 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL 3064
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3065 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3124
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3125 WGLGEYGRLGHG 3136
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E PV+ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4014
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4015 YGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4074
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+++ L G++V AAG HSAC+ G +Y +G
Sbjct: 4075 LGHGNRSPC---------DRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4126 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4184
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P P+ L G+ TK A G QS A
Sbjct: 747 RVTK--PEPS---ALPGLDTKHIVGIACGPAQSFA 776
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4225 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4284
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4285 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4319
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++ P + L+ G G H + T G VY G N + QLG +
Sbjct: 52 GCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
SL P +IS + K+V +++ G HHS +T DGE+Y WG N++GQ+G G A + I
Sbjct: 111 TTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAI 170
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P CL A G S+AV G+V WG G+G+LG G S +
Sbjct: 171 PRRV-TSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLG---------NSGN 220
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----P 281
+ TP I L+G++V+ A G+ H+ + + G++Y +G + ++ GN + + P
Sbjct: 221 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQL--GTGNRSNQSYPVP 278
Query: 282 SLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G ++Y WG
Sbjct: 279 ITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWG 311
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 127/274 (46%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L++TE V+A G N G LG+ + S+E
Sbjct: 6 KWPIFAFRSPEELKLIRQACVFGSAGNEVLYVTENNEVFALGTNCSGCLGVGDTQN-SVE 64
Query: 115 PLRISGL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE+Y WG N+ QLG G ++P
Sbjct: 65 PRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
++ T + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 LVNKKVT-EVACGSHHSMILTSDGEVYTWGYNNSGQVGSGS---------TANQAIPRRV 174
Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
K+ + A G + S + ENG VY++G ++ + P I+ L
Sbjct: 175 TSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 235 VQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTG 268
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P+ I+ K V++I+ + H S+A T ++YMWG+ GQ
Sbjct: 264 QLGTGNRSNQSY-PVPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 317 --SITLPYLTHFACTDDVF 333
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4005 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4064
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4065 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4122
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4123 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4180 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4232
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4233 RPRLVAALQGKKVNRVACGSAHT 4255
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3064 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3123
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3124 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3181
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3182 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3238
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3239 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3287
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3288 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3319
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3010 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3069
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3070 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3128
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3129 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3182
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3183 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3237
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3238 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3285
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3965 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 4023
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4024 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4081
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4082 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4132
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4133 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4192
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4193 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4226
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2992 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3051
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3052 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3109
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3110 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3160
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3161 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3220
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3221 TWGKGDYFRLGHG 3233
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2946 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3003
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3057
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3058 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3117
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3118 LGEYGRLGHG 3127
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4163 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4222
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4223 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4257
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 312 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 371
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 372 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 429
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 430 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 486
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 487 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 539
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 540 RPRLVAALQGKKVNRVACGSAHT 562
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 272 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 330
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 331 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 388
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 389 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 439
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 440 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 499
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 500 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 533
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 206 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 263
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 264 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 321
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 322 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 376
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 377 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 430
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 431 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 481
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 201 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 259
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 260 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 319
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 320 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 370
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 371 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 429
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 470 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 529
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 530 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 564
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 199 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 258
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 259 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 318
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 319 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 373
>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G +F
Sbjct: 335 WGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNF 394
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G G + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 395 GLSGHGNEVSHWM-PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 453
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 454 DRQS--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 512 GRLGHGDKETRL---------VPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSV 562
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 563 YGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 621
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 128/269 (47%), Gaps = 32/269 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
++ ++CGG H +T+ G VY+ G G+LG + +P I L ++ ++
Sbjct: 312 DVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP-QPKLIDALAHMNIELVAC 370
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVE-CLSGIFTKQAALGFEQ 188
G +H+ A+T+ G+LY WG N GL +V +P ++ L GI + G
Sbjct: 371 GEYHTCAVTLSGDLYTWG-NGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWH 429
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ ++G G G LGHG SI PR ++ L+G++ AA G
Sbjct: 430 TAVVTSAGQLFTFGDGSFGVLGHGDRQSI---------SVPREVESLKGLRTVRAACGVW 480
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
H+A + E +G+++ +GD DK G+ R P+ ++ L P +
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKETRLVPTCVASLVEPNFCQ 538
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS+ G LG
Sbjct: 539 VACGHCFTVALTTSGHVYTMGSSVYGQLG 567
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E+R P ++ + + +ACG T+ LT +G VY G + +GQ
Sbjct: 506 WGDGDKGRLGHGDKETRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSVYGQ 565
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G + P R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 566 LGNPQADG--MVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 623
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L + G + A+
Sbjct: 624 DDRN--SPTLVEALKDKQVRSVVCGINFTAAI 653
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 22/195 (11%)
Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++++WG+ + N +LG A +P +E + + + G + VT
Sbjct: 268 GDVFIWGEGTGEGILGGGNSRLGSSSGAKMDCLVPKPLEFAGRLDVQNISCGGRHATLVT 327
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V SWG GRLGHG + + P+LI L + +++ A G H+ +
Sbjct: 328 KQGEVYSWGEESGGRLGHGVDCDVP---------QPKLIDALAHMNIELVACGEYHTCAV 378
Query: 254 DENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
+G +Y +G+ + L GN H L L + + CG +HT V+TS G+
Sbjct: 379 TLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQ 438
Query: 309 LYTWGSNENGCLGIG 323
L+T+G G LG G
Sbjct: 439 LFTFGDGSFGVLGHG 453
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 147/314 (46%), Gaps = 59/314 (18%)
Query: 43 WGNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN G+LG L + + + P+ + ++ + ++ GG HT+ + + +Y+ G +
Sbjct: 1218 WGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKY 1277
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + ++L P RI +++ I+TGY H+ + G+L+ +G N +GQLGL
Sbjct: 1278 GQLGHGVSTPHNL-PKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLND 1336
Query: 160 KAAKVIPIPTKVEC-----------LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+PIPT+V ++GIF G SV T G V S+GA G+
Sbjct: 1337 LKHH-LPIPTRVNTADIHHAGQPTRVTGIFC-----GHSHSVLRTSHGDVYSFGANAKGQ 1390
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S P+LI+ L+G +K G H+ + VY +G
Sbjct: 1391 LGHGSTESC---------RYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWG----- 1436
Query: 269 KMLFQEGNH------ARRPSLISKL------PYSEEVVCGGYHTCVLT-------SGGEL 309
+G H + + L+ KL E VVCG YHT LT +GG +
Sbjct: 1437 -----QGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNV 1491
Query: 310 YTWGSNENGCLGIG 323
Y GS+E+G LGIG
Sbjct: 1492 YICGSSEHGKLGIG 1505
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+K +S G+ H++ ITVDGEL+ WG N++GQLG G A K P +VE L
Sbjct: 1193 EKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMM 1252
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+LG E +V + + SWG G G+LGHG ST P+ I+E G K+
Sbjct: 1253 MSLGGEHTVVIDRSFHIYSWGNGKYGQLGHG---------VSTPHNLPKRIEEFAGQKIS 1303
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEE-------- 292
A G+ H+ + G ++ FG ++ L +H P+ ++
Sbjct: 1304 SIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTG 1363
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ CG H+ + TS G++Y++G+N G LG G
Sbjct: 1364 IFCGHSHSVLRTSHGDVYSFGANAKGQLGHG 1394
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 131/304 (43%), Gaps = 36/304 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG YG+LG G P F + ++A G HTL L G ++A G N+ GQ
Sbjct: 1272 WGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQ 1331
Query: 103 LGISENIGYSLEPLRIS-------GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
LG+++ + P R++ G V I G+ HS T G++Y +G N+ GQL
Sbjct: 1332 LGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQL 1391
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P ++ L G K+ G +V T V WG G LG G
Sbjct: 1392 GHG--STESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTG--- 1446
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI-----DEN--GRVYIFGDRAVD 268
+ +E P+L++ +V+ G H+A + D N G VYI G
Sbjct: 1447 ------SNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHG 1500
Query: 269 KMLFQEGNHARRPSLISKLP------YSEEVV---CGGYHTCVLTSGGELYTWGSNENGC 319
K+ G R PSL P S VV G ++TS G LY WG+ +G
Sbjct: 1501 KLGI--GGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGALYMWGAGTHGQ 1558
Query: 320 LGIG 323
+G G
Sbjct: 1559 IGNG 1562
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 115/267 (43%), Gaps = 8/267 (2%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRIS 119
P+ F + K+++CG H +T G ++ G N GQLG G + P+R+
Sbjct: 1184 HPMPALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVE 1243
Query: 120 GLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
LK+ ++ +S G H+ I +Y WG GQLG G +P ++E +G
Sbjct: 1244 SLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPH--NLPKRIEEFAGQK 1301
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
A G+ ++ + GG + ++G+ G+LG L T T + +
Sbjct: 1302 ISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPI--PTRVNTADIHHAGQPT 1359
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCG 296
+V G HS +G VY FG A ++ R P LI L + + CG
Sbjct: 1360 RVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCG 1419
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
YHT V T +Y WG E+ CLG G
Sbjct: 1420 PYHTVVTTDLDSVYCWGQGEHMCLGTG 1446
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-------GCVYAT 95
WG G++ LG GS ++ P + F ++ + CG HT LT+ G VY
Sbjct: 1435 WGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYIC 1494
Query: 96 GLNDFGQLGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
G ++ G+LGI S ++ + + S VV +++G ++ IT +G LYMWG
Sbjct: 1495 GSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGALYMWGAG 1554
Query: 151 SNGQLGLGKKAAKVIP 166
++GQ+G GK IP
Sbjct: 1555 THGQIGNGKNQDTWIP 1570
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LG GS ES P + + ++K + CG HT+ T+ VY G +
Sbjct: 1383 FGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMC 1442
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-------GELYMWGKNSNGQL 155
LG N + L + K V ++ G +H++ +T G +Y+ G + +G+L
Sbjct: 1443 LGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKL 1502
Query: 156 GLG---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G+G + + P + ++ A G E + +T G + WGAG G++G+G
Sbjct: 1503 GIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALITSNGALYMWGAGTHGQIGNG 1562
Query: 213 Q 213
+
Sbjct: 1563 K 1563
>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
1279]
Length = 593
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 150/341 (43%), Gaps = 43/341 (12%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGIC---KRWISSTLQRRFAALWGNGDYGRLGLGSLES 58
LGR+ T+ + Q + + I I+ T R L G DYG+LG G +S
Sbjct: 253 LGRATTSPSDSTPTQASLINDAVSISLGEYHAIALTNDGRVVTL-GRDDYGQLGDGPGDS 311
Query: 59 ---RWRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
P + +KA+A G H+L LT G VYA G ND GQLG+
Sbjct: 312 SGTHTAPNLRDNILPAGIKAVAVQAGRYHSLALTSEGTVYAWGRNDVGQLGLGTITAPQE 371
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKV 171
P I GL +V+ ++ G H+ A+ DG ++ WG N NG+LG G + P +PT V
Sbjct: 372 SPALIPGLS-DVIALAAGDDHTLALKADGSVWAWGDNPNGELGTGD----ITPYSVPTAV 426
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G+ K A G SVA+ G V +WG G+LG+G T+ P
Sbjct: 427 SNLPGV--KAIAAGGNHSVALLADGTVRTWGYNNHGQLGNGSN---------TNSNVPVP 475
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHARR-----PSLIS 285
+ L V V IAA G+ + + NG V +G D + FQ GN A P +
Sbjct: 476 VTGLTDV-VGIAA-GYEFTLAVLSNGSVKAWGHDDS-----FQLGNGATTGDQTTPVDVQ 528
Query: 286 KLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+P V G +H L G + WGSN G LG G
Sbjct: 529 GIPTGRSVRGLTAGIFHALALLDDGSMVAWGSNVQGQLGDG 569
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 115/253 (45%), Gaps = 14/253 (5%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
LA GG + + G V++ G N +GQLG + P + S L + V IS G +
Sbjct: 224 NTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGRATTSPSDSTPTQAS-LINDAVSISLGEY 282
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGK---KAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
H+ A+T DG + G++ GQLG G P +GI G S+
Sbjct: 283 HAIALTNDGRVVTLGRDDYGQLGDGPGDSSGTHTAPNLRDNILPAGIKAVAVQAGRYHSL 342
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G V +WG G+LG LG + + E +P LI L V AAG H+
Sbjct: 343 ALTSEGTVYAWGRNDVGQLG-------LGTITAPQE-SPALIPGLS--DVIALAAGDDHT 392
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
+ +G V+ +GD ++ + P+ +S LP + + GG H+ L + G +
Sbjct: 393 LALKADGSVWAWGDNPNGELGTGDITPYSVPTAVSNLPGVKAIAAGGNHSVALLADGTVR 452
Query: 311 TWGSNENGCLGIG 323
TWG N +G LG G
Sbjct: 453 TWGYNNHGQLGNG 465
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G LG G + P S +KA+A GG H++ L G V G N+ GQ
Sbjct: 404 WGDNPNGELGTGDITPYSVPTAVSNLP--GVKAIAAGGNHSVALLADGTVRTWGYNNHGQ 461
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N ++ P+ ++GL +VV I+ GY + A+ +G + WG + + QLG G
Sbjct: 462 LGNGSNTNSNV-PVPVTGLT-DVVGIAAGYEFTLAVLSNGSVKAWGHDDSFQLGNGATTG 519
Query: 163 KVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
P V+ + +G + G ++A+ G +++WG+ G+LG G +S
Sbjct: 520 DQT-TPVDVQGIPTGRSVRGLTAGIFHALALLDDGSMVAWGSNVQGQLGDGTPNS 573
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 25/271 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3005 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 3064
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +NI L+P I L +VQ++ G + A+T +G ++ WG G+LG G
Sbjct: 3065 LGHGDNIT-QLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG- 3122
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+ + Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3123 -GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV-- 3179
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P +I+ L+ KV A G LH + + G+VY +GD Q+GN
Sbjct: 3180 -------RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3228
Query: 279 ---RRPSLISKLP--YSEEVVCGGYHTCVLT 304
R+P+L+ L + V CG H+ T
Sbjct: 3229 IVNRKPALVHGLEDVHINRVACGSSHSIAWT 3259
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ + P + A + + + +ACGGAH+ +T TG +Y G +G+
Sbjct: 3981 WGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGR 4040
Query: 103 LGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P I G K V +G + IT D ++ WG G+LG G
Sbjct: 4041 LGHGDSED-QLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4098
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG
Sbjct: 4099 -GSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG------- 4150
Query: 220 FLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T E+ P+ + L+G K+ A G LH + G V+ +GD ++ N
Sbjct: 4151 ----TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNA 4206
Query: 278 ARRPSLISKLPYSE--EVVCGGYHT 300
+RP L+S L + V CG HT
Sbjct: 4207 IQRPRLVSALQGKKITNVACGSAHT 4231
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 133/287 (46%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H + LT G V++ G + G
Sbjct: 2952 GEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3011
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ K++ I+ G HS+AIT GELY WG G+LG G
Sbjct: 3012 KLGHGNRLNLD-KPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3070
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P ++ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3071 ITQL--KPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGG----- 3123
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P I+ L ++V G S + + G V+ +G ++ H
Sbjct: 3124 ----SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 3179
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P++I L + V G H +T G++Y WG N++G G G
Sbjct: 3180 RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3226
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 119/244 (48%), Gaps = 19/244 (7%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G H L LT+ VY+ G D G+LG + EP I LK K+++ + G +S+AI
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDT-STKEEPTLIQALKGKDIIDVECGGTYSAAI 582
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG--FEQSVAVTGGG 196
+ +G LY WG+ + G+LG G A+ PT + LS + A G + ++ +T G
Sbjct: 583 SANGALYTWGRGNYGRLGHG--TAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQG 640
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
KV SWG G G+LG G S PRLI++L+ VK+ G S + E+
Sbjct: 641 KVYSWGDGDYGKLGRGG---------SDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSED 691
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWG 313
G VY +G K+ + R P ++ L +VV G H LT GE+Y WG
Sbjct: 692 GHVYTWGKGEGWKLGHPTEENVRFPEMVEVL-RDRKVVGVSLGVSHVLALTDQGEVYGWG 750
Query: 314 SNEN 317
NEN
Sbjct: 751 KNEN 754
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 21/273 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G ++ P + A + + + CGG ++ ++ G +Y G ++G+
Sbjct: 539 WGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGR 598
Query: 103 L--GISENIGYSLEPLRISGLKKE-VVQISTG--YHHSSAITVDGELYMWGKNSNGQLGL 157
L G +E+ L P IS L E +++++ G Y H+ IT G++Y WG G+LG
Sbjct: 599 LGHGTAED---CLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGR 655
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G +P +E L + Q G + SVA++ G V +WG G +LGH E ++
Sbjct: 656 GGSDGS--KLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENV 713
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
P +++ L KV + G H + + G VY +G ++
Sbjct: 714 ---------RFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELF 764
Query: 278 ARRPSLISKLPYSEE--VVCGGYHTCVLTSGGE 308
++P LI L + V CG + T E
Sbjct: 765 VQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNE 797
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 121/267 (45%), Gaps = 19/267 (7%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P + + + +K +A GG H L L+ VY+ G D G+LG + P I
Sbjct: 3946 PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACE-TPKLIE 4004
Query: 120 GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L+ E++ I+ G HS+AIT G+LY WGK G+LG G ++ P +E L G
Sbjct: 4005 ALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKP--KLIEELVGYK 4062
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G Q++ +T V SWG G G+LG G S P+ I+ L
Sbjct: 4063 VIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG---------SDGCKVPKKIESLA 4113
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
G+ V G S + +G VY +G ++ G H RRP ++ L + +
Sbjct: 4114 GLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIA 4173
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLG 321
G H + GE++TWG N+ G LG
Sbjct: 4174 TGSLHCVACSDEGEVFTWGDNDEGQLG 4200
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G VYATG
Sbjct: 3875 WGHNHRGQLGGIEGAKVKIPTPCEALS--TLRPVQLVGGEQTLFAVTADGKVYATGYGAG 3932
Query: 101 GQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI + LE ++ +KK + +++G H A++ D ++Y WG+ +G+LG
Sbjct: 3933 GRLGIGGTDSVLVPTLLESIQHVFIKK--IAVNSGGKHCLALSADNDVYSWGEGDDGKLG 3990
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + A P +E L G A G S A+T G++ +WG G GRLGHG
Sbjct: 3991 HGNRLA--CETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD--- 4045
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+LI+EL G KV A +G + CI ++ V+ +GD K+
Sbjct: 4046 ------SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4099
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4100 SDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4150
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 113/264 (42%), Gaps = 23/264 (8%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P C + ++K + C L LT+TG V+ + S + E +SG+
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF--------MYYSSDTQCPQEMTGLSGI 513
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ H A+T D E+Y WG G+LG G + K PT ++ L G
Sbjct: 514 NMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK--EEPTLIQALKGKDIID 571
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G S A++ G + +WG G GRLGHG L TP +I L +
Sbjct: 572 VECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCL---------TPTMISALSDEHII 622
Query: 242 IAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
A G + H+ CI G+VY +GD K+ + ++ P LI KL + +V CG
Sbjct: 623 KVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGA 682
Query: 298 YHTCVLTSGGELYTWGSNENGCLG 321
+ L+ G +YTWG E LG
Sbjct: 683 QFSVALSEDGHVYTWGKGEGWKLG 706
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 105/220 (47%), Gaps = 16/220 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G+ E P + SA + +ACG AHTL +T G VY+ G D+
Sbjct: 591 WGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDY 650
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G L P I L+ ++VQ+ G S A++ DG +Y WGK + LG
Sbjct: 651 GKLGRGGSDGSKL-PRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWK--LGH 707
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P VE L +LG +A+T G+V WG + ++ E +
Sbjct: 708 PTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFV-- 765
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGR 258
PRLI+ L+G KV G S A D+N R
Sbjct: 766 -------QQPRLIEALKGQKVVGVCCGPAQSFAWTDDNER 798
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 118/252 (46%), Gaps = 38/252 (15%)
Query: 89 TGC-VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
GC V+ GLND QLG + + L P+ I+G K + +S
Sbjct: 2892 VGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSH------- 2944
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
+G+LY G+ +NG+LGLG + +P P + LS K+ A+ G + ++A+T
Sbjct: 2945 ---EGKLYACGEGTNGRLGLGH--SNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLD 2999
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV SWG G G+LGHG ++ P++I+ L K++ A G HSA I
Sbjct: 3000 GKVFSWGEGEDGKLGHGNRLNL---------DKPKMIEALRSKKIRDIACGSSHSAAITS 3050
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYT 311
+G +Y +G ++ + +P LI L +V CG T LT G +++
Sbjct: 3051 SGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFS 3110
Query: 312 WGSNENGCLGIG 323
WG + G LG G
Sbjct: 3111 WGDGDFGKLGRG 3122
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
Q STG S TV +++WG N QLG G K +KV +P + + LS ++ A G
Sbjct: 2882 QDSTGEPSS---TVGCRVFVWGLNDKDQLG-GMKGSKV-KLPVQSDFLSQLWPIHIAGGS 2936
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA-- 244
+ V+ GK+ + G G +GRLG G +++ PR I L +K A
Sbjct: 2937 KSLFIVSHEGKLYACGEGTNGRLGLGHSNNV---------PYPRPIPFLSQYVIKKVAVH 2987
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
+G H+ + +G+V+ +G+ K+ + +P +I L + ++ CG H+
Sbjct: 2988 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAA 3047
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+TS GELYTWG E G LG G
Sbjct: 3048 ITSSGELYTWGLGEYGRLGHG 3068
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV IPT E LS + Q G + AVT GKV +
Sbjct: 3870 GTIYGWGHNHRGQLG-GIEGAKV-KIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYAT 3927
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G S+L P L++ ++ V +K A +G H + + V
Sbjct: 3928 GYGAGGRLGIGGTDSVL---------VPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3978
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ P LI L E ++ CGG H+ +TS G+LYTWG
Sbjct: 3979 YSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRY 4038
Query: 318 GCLGIG 323
G LG G
Sbjct: 4039 GRLGHG 4044
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 168 PTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P ++ LSGI + A E +A+T +V SWG G GRLGHG S+
Sbjct: 504 PQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTST--------- 554
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+ P LI+ L+G + G +SA I NG +Y +G ++ P++IS
Sbjct: 555 KEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMIS 614
Query: 286 KLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
L +V CG + HT +TS G++Y+WG + G LG G
Sbjct: 615 ALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRG 656
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG + + RP + SA + + +ACG AHTL
Sbjct: 4191 WGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTL 4232
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4058 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4117
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4118 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4175
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4176 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4232
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4233 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4285
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4286 RPRLVAALQGKKVNRVACGSAHT 4308
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3066 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3126 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3184 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3241 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3289
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3290 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3321
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3012 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3071
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3072 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3130
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3131 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3184
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3185 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3239
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3240 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3287
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4018 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 4076
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4077 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4134
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4135 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4185
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4186 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4245
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4246 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4279
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3952 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4009
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4010 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4067
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4068 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4122
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4123 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4176
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4177 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4227
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2994 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3053
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3054 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3111
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3112 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3162
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3163 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3222
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3223 TWGKGDYFRLGHG 3235
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2948 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3005
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3059
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3060 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3119
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3120 LGEYGRLGHG 3129
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3947 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4005
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4006 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4065
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4066 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4116
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4117 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4175
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4216 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4275
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4276 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4310
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3945 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4004
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4005 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4064
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4065 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4119
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------SSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 G---------STVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3228 TWGKGDYFRLGHG 3240
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3125 LGEYGRLGHG 3134
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4070 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3759 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3818
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3819 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3876
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3877 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3933
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3934 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3986
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 3987 RPRLVAALQGKKVNRVACGSAHT 4009
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2767 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2826
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2827 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2884
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2885 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2941
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 2942 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2990
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2991 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3022
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2713 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2772
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2773 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2831
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2832 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2885
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2886 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2940
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 2941 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 2988
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3719 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3777
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3778 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3835
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 3836 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3886
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3887 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3946
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 3947 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3980
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3653 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3710
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3711 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3768
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3769 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3823
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3824 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3877
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 3878 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3928
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2695 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2754
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2755 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2812
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2813 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2863
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2864 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2923
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2924 TWGKGDYFRLGHG 2936
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2649 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2706
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 2760
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 2761 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2820
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 2821 LGEYGRLGHG 2830
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3648 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3706
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3707 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3766
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3767 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3817
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3818 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3876
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 84/197 (42%), Gaps = 39/197 (19%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 445
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 446 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 501
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 502 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 549
Query: 230 RLIKELEGVKVKIAAAG 246
L+ L+G+KV A G
Sbjct: 550 MLVAGLKGLKVIDVACG 566
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 112/268 (41%), Gaps = 47/268 (17%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 459 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 517
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G +G
Sbjct: 518 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACG-------SG 568
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+ L+ + RL S+LG L + +L GV + G+
Sbjct: 569 DAQTLAVTENETTRLSVLWR-SVLGILCVSGVVESFRYNQL-GVGCRCRQRGWEPP---- 622
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEE-----VVCGG--------- 297
+ + +G D ML +EG A RP + S++ +VCGG
Sbjct: 623 QEDLKFFYGVLTRDVML-REGQIVFEAGRPGCVPTPVSSQKQALGYIVCGGCSSLGPGKK 681
Query: 298 --------YHTCVLTSGGELYTWGSNEN 317
H LT E+++WGSN+
Sbjct: 682 VIDVAAGSTHCLALTEDSEVHSWGSNDQ 709
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3917 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 3976
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 3977 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4011
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 474 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 532
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
++G+LG + ++ P+ ++GLK +V+ ++ G + + V
Sbjct: 533 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 575
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3646 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3705
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 3706 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3765
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 3766 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3820
>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Acyrthosiphon pisum]
Length = 505
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 144/286 (50%), Gaps = 24/286 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G +G+LGLG E+ ++P + + +K +ACG +HT+ TE VY G N GQ
Sbjct: 58 FGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNSDGQ 117
Query: 103 LGIS-ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-- 158
LG S ++ +S P+ ++ K ++Q+S G +H++A+ +G++Y+WG NS+ QLGL
Sbjct: 118 LGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQLGLNSM 177
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + +PT V + + G + VT G + + G G+LGHG S
Sbjct: 178 DDDSVNVSVPTIVPIALPVL--YVSCGHTHTAFVTRIGDLYTCGDREYGKLGHGLWS--- 232
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S + T +++K + G H+ +++ G+V++ G+ ++ +
Sbjct: 233 ---LSRVDTTEKIVK---------VSCGANHTIALNDAGKVFVCGNNDCGQIGLRNVTSQ 280
Query: 279 RR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P I+ P ++VCG H+ +T+ G+L+ G + G LGI
Sbjct: 281 GHLYPCPITNEPIV-QIVCGQSHSAFITASGKLFMCGDGKYGKLGI 325
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 23/242 (9%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG V+ +G+ ++NI P V++IS G HS + +G ++
Sbjct: 7 IPETGAVFT-----YGKSSFADNI-----PSHFFIRNDPVIEISCGEEHSGIVCKNGRVF 56
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+GKNS GQLGLG + + P V+ L K A G ++ T V +G
Sbjct: 57 CFGKNSFGQLGLGH--TENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNS 114
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG T P + + +AG H+A + ENG VY++G
Sbjct: 115 DGQLGQ-------SVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSN 167
Query: 266 AVDKM-LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ ++ L + + S+ + +P + V+ CG HT +T G+LYT G E G LG
Sbjct: 168 SDRQLGLNSMDDDSVNVSVPTIVPIALPVLYVSCGHTHTAFVTRIGDLYTCGDREYGKLG 227
Query: 322 IG 323
G
Sbjct: 228 HG 229
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 29/256 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGY 132
++CG H+ + + G V+ G N FGQLG+ +EN+ +P + LK + V+ I+ G
Sbjct: 39 ISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENV---YKPNCVKSLKPDKVKHIACGR 95
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ T + +Y +G NS+GQLG +P +V + Q + G + A+
Sbjct: 96 SHTIVSTENNIVYGFGDNSDGQLGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAAL 155
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V WG+ +LG S + P ++ + V + G H+A
Sbjct: 156 LENGDVYVWGSNSDRQLGLNSMDD-----DSVNVSVPTIVP--IALPVLYVSCGHTHTAF 208
Query: 253 IDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
+ G +Y GDR K+ L+ +S++ +E++V CG HT L
Sbjct: 209 VTRIGDLYTCGDREYGKLGHGLWS----------LSRVDTTEKIVKVSCGANHTIALNDA 258
Query: 307 GELYTWGSNENGCLGI 322
G+++ G+N+ G +G+
Sbjct: 259 GKVFVCGNNDCGQIGL 274
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+ GN D G++GL ++ S+ C + + CG +H+ F+T +G ++ G +G
Sbjct: 263 VCGNNDCGQIGLRNVTSQGHLYPC-PITNEPIVQIVCGQSHSAFITASGKLFMCGDGKYG 321
Query: 102 QLGISEN 108
+LGI N
Sbjct: 322 KLGIDVN 328
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 133/290 (45%), Gaps = 29/290 (10%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGNGD GRLG G ++ V+ + H G H + LT G VY+ G D
Sbjct: 215 WGNGDGGRLGHGDTNVCYKGQKVLVIVYPYHP------EGKHYMALTSEGEVYSWGNGDG 268
Query: 101 GQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG + EP + GL + VV I G +S+AIT DGEL+ WG+ + G+L
Sbjct: 269 GRLGHGDTNSRE-EPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRL 327
Query: 156 GLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G G ++ P T V L G + G Q++AVT G V SWG G G+LG G
Sbjct: 328 GHGSSEDQLTP--TLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGG 385
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S TP++I L+G + G S + + G ++ +G ++
Sbjct: 386 ---------SDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHG 436
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
H R P + L + +V G H V+T GE+Y WG N+ G LG
Sbjct: 437 TEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLG 486
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 34/283 (12%)
Query: 55 SLESRWRPVVCSAFEKHSLKALA-CGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYS 112
S ES+ ++ S +K LK A G H + LT G VY+ G D G+LG + N+ Y
Sbjct: 174 SSESQGPQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYK 233
Query: 113 LEPLRISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
++V+ I YH H A+T +GE+Y WG G+LG G ++ P
Sbjct: 234 ---------GQKVLVIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSR--EEP 282
Query: 169 TKVECLSGI----FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
T V LSG G S A+T G++ +WG G GRLGHG S
Sbjct: 283 TLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGS---------SE 333
Query: 225 SEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ TP L+ L+G +V +G + + ++G V+ +GD K+ + + P
Sbjct: 334 DQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPK 393
Query: 283 LISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+I +L + V CG + LT G ++TWG ++ LG G
Sbjct: 394 IIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHG 436
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P + + + + + CG A TL +T+ G V++ G D+
Sbjct: 319 WGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDY 378
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +++V++ G S A+T G ++ WGK + +LG G
Sbjct: 379 GKLGRGGSDGCKT-PKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGT 437
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I P ++E L G A+G + +T G+V WG G+LG +SS
Sbjct: 438 E--EHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLG---DSSF-- 490
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
+++ P L+ L+G + A G S C
Sbjct: 491 ----STKSDPTLMP-LDGKSISGIACGPAQSFC 518
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P+ K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 SDGSKVPM--KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG+G
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLG 693
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGSKVPMK 4192
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3293
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLG G E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ P I L +V CG + LT G +YTWG + LG G
Sbjct: 4184 SDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGTRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3229 TWGKGDYFRLGHG 3241
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3126 LGEYGRLGHG 3135
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LGLG
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 LGI--SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG+ E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGLGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4282
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4283 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4072 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4094 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4153
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4154 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4211
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4212 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4268
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4269 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4321
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4322 RPRLVAALQGKKVNRVACGSAHT 4344
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4054 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4112
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4113 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4170
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4171 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4221
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4222 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4281
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4282 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4315
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3988 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4045
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4046 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4103
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4104 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4158
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4159 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4212
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4213 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4263
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3228 TWGKGDYFRLGHG 3240
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3125 LGEYGRLGHG 3134
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3983 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4041
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4042 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4101
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4102 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4152
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4153 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4211
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4252 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4311
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4312 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4346
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3981 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4040
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4041 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4100
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4101 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4155
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3810 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3869
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3870 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3927
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3928 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3984
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3985 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4037
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4038 RPRLVAALQGKKVNRVACGSAHT 4060
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3770 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 3828
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3829 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3886
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 3887 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3937
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3938 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3997
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 3998 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4031
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 150/310 (48%), Gaps = 34/310 (10%)
Query: 6 LTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVC 65
+TA++ Y +K K+ G + + F+ WG GD G+LG S P +
Sbjct: 2792 ITALSSYVVK---KVAVHSGTSQTGFXPVDGKVFS--WGEGDDGKLGHFSR----MPRLI 2842
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
A + ++ +ACG +H+ LT +G +Y GL ++G+LG +N L+P + L
Sbjct: 2843 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVLLGHR 2901
Query: 125 VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
V+Q++ G + A+T +G ++ G ++G G + K IP +E L+G Q
Sbjct: 2902 VIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPE-VKGCNIPQNIERLNGQGVCQI 2960
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK-VK 241
G + S+A+T G V +WG G RLGHG + + P++++ L G K V
Sbjct: 2961 ECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV---------RKPQVVEGLRGKKIVA 3011
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EVVC 295
+ +G LH + ++G+VY +GD Q+GN R+P+L+ L + V C
Sbjct: 3012 CSCSGALHCLAVTDSGQVYAWGDNDHG----QQGNGTTTVNRKPTLVQGLEGQKITRVAC 3067
Query: 296 GGYHTCVLTS 305
G H+ T+
Sbjct: 3068 GSSHSVAWTT 3077
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3704 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3761
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3762 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3819
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3820 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3874
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3875 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3928
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 3929 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3979
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 115/255 (45%), Gaps = 21/255 (8%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ G + T F G V++ G D G+LG +S P I LK K + I+ G
Sbjct: 2804 AVHSGTSQTGFXPVDGKVFSWGEGDDGKLG-----HFSRMPRLIEALKTKRIRDIACGSS 2858
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVA 191
HS+A+T GELY WG G+LG G ++ P KV L G Q A G Q++A
Sbjct: 2859 HSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLA 2916
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T G V S G G ++G G E P+ I+ L G V G S
Sbjct: 2917 LTDEGLVFSLGDGDLWKIGPGPEVKGCNI--------PQNIERLNGQGVCQIECGAQFSL 2968
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGE 308
+ ++G V+ +G ++ H R+P ++ L + V C G H +T G+
Sbjct: 2969 ALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQ 3028
Query: 309 LYTWGSNENGCLGIG 323
+Y WG N++G G G
Sbjct: 3029 VYAWGDNDHGQQGNG 3043
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3699 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3757
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3758 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3817
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3818 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3868
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3869 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3927
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 117/256 (45%), Gaps = 26/256 (10%)
Query: 79 GGAHTLF-LTETGCVYATG-LNDFGQLGISENIGYSLEPL-RISGLKKEVVQ---ISTGY 132
GG+ +LF +T G VYA G + G+ + G P I+ L VV+ + +G
Sbjct: 2750 GGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGT 2809
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ VDG+++ WG+ +G+LG + +P +E L + A G S A+
Sbjct: 2810 SQTGFXPVDGKVFSWGEGDDGKLGHFSR------MPRLIEALKTKRIRDIACGSSHSAAL 2863
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHS 250
T G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2864 TSSGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2914
Query: 251 ACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
+ + G V+ GD + K+ E P I +L ++ CG + LT G
Sbjct: 2915 LALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2974
Query: 308 ELYTWGSNENGCLGIG 323
++TWG + LG G
Sbjct: 2975 VVWTWGKGDYFRLGHG 2990
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ +++ WG N QLG K K I +P+ E LS + Q A G + AVT
Sbjct: 2704 SAATIRTKVFSWGLNDKDQLGGLKN--KKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2761
Query: 196 GKVLS------WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
GKV + W A G G + G G + + S Y VK +G
Sbjct: 2762 GKVYACGEATKWPAWGLG-ISSGTVPIPHGXITALSSYV---------VKKVAVHSGTSQ 2811
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
+ +G+V+ +G+ K+ G+ +R P LI L ++ CG H+ LTS G
Sbjct: 2812 TGFXPVDGKVFSWGEGDDGKL----GHFSRMPRLIEALKTKRIRDIACGSSHSAALTSSG 2867
Query: 308 ELYTWGSNENGCLGIG 323
ELYTWG E G LG G
Sbjct: 2868 ELYTWGLGEYGRLGHG 2883
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3968 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4027
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4028 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4062
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3697 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3756
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 3757 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3816
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 3817 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3871
>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
Length = 1118
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 145/302 (48%), Gaps = 37/302 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLGLG + +P + A ++ +ACG HT +T G +Y G+++
Sbjct: 300 WGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNA 359
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG+ + +V ++ G H++ I+ G+L+ +G + G LG G
Sbjct: 360 GLLGNGTDVSHWM-PKRISGILEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHG 418
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
K K I P +V+ L+G+ T A G + AV GK+ +WG G
Sbjct: 419 DK--KSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKN 476
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+V+ G
Sbjct: 477 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGS--- 524
Query: 268 DKMLFQEGN-HA--RRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ Q GN HA ++P L+ KL +EEV CG YH VLTS E+YTWG NG LG
Sbjct: 525 -SVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLG 583
Query: 322 IG 323
G
Sbjct: 584 HG 585
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + + I+ G HS+ +T GE++ WG+ + G+LGLG K + P VE
Sbjct: 268 KPLE-SNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLG--MGKDVTQPRLVEA 324
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G +G LG+G + S + P+
Sbjct: 325 LAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTD---------VSHWMPKR 375
Query: 232 IKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG++V A G H+A I G+++ FGD + + P + L
Sbjct: 376 ISGILEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGL 435
Query: 289 YSEEVVCGGYHTCVLT-----------SGGELYTWGSNENGCLGIG 323
+ V CG +HT + G+L+TWG + LG G
Sbjct: 436 RTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHG 481
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E R +P A ++ +ACG + T+ LT +G V+ G + +GQ
Sbjct: 470 WGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSVYGQ 529
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G + L + +++ G +H +T E+Y WGK +NG+LG G
Sbjct: 530 LGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVED 589
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K A G S A+
Sbjct: 590 R--KSPTLVESLKDKHVKIIACGSNYSAAI 617
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 27/197 (13%)
Query: 142 GELYMWGK--NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++++WG+ + N +A+ V + +P +E + + A G S VT
Sbjct: 234 GDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAIVTR 293
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG GRLG LG + ++ PRL++ L V + A G H+ +
Sbjct: 294 QGEVFTWGEETGGRLG-------LGMGKDVTQ--PRLVEALAATTVDLVACGEFHTCAVT 344
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTSG 306
+G +Y +GD + L G P IS ++ Y V CG +HT +++S
Sbjct: 345 MDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAY---VACGPWHTALISST 401
Query: 307 GELYTWGSNENGCLGIG 323
G+L+T+G G LG G
Sbjct: 402 GQLFTFGDGTFGVLGHG 418
>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
Length = 228
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Query: 43 WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG G++G+LGL + P + +ACG +HTL LT +G VY+ G
Sbjct: 4 WGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG LG S + S +VQI+ G +HS A+TV+G+L+ WG+ GQLG G
Sbjct: 64 FGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS 123
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+P V LS Q G + ++A+ G++ SWG G G+ GHG + +IL
Sbjct: 124 VENHLQPVP--VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNIL- 180
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
P+L+ LE + A+AG H+ + G VY +GD ++L
Sbjct: 181 --------VPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVL 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 16/228 (7%)
Query: 96 GLNDFGQLGISENIGYSLEPL-RISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSN 152
G +FGQLG+ + G PL R +E+ V+++ G H+ A+T G++Y +G+ +
Sbjct: 5 GCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTF 64
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G LG G + P+ V+ L G+ Q A G S A+T G++ SWG G G+LG G
Sbjct: 65 GALGHGTTESCSSPV--IVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCG 122
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ L + T+ + RL+ ++ G ++ ID +G+++ +G +
Sbjct: 123 SVENHLQPVPVTA-LSDRLLTQV--------VCGADYTMAIDSDGQLFSWGHGHWGQTGH 173
Query: 273 QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
++ P L+ L + G H LTSGG +Y WG NE G
Sbjct: 174 GTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQG 221
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVI--PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
L WG GQLGL K AA V P+P + + + A G ++A+TG G V S+
Sbjct: 1 LVSWGCGEFGQLGL-KDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSF 59
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G LGHG S +P ++ L G+ + A G HS + G+++
Sbjct: 60 GQGTFGALGHGTTESC---------SSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFS 110
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G ++ + +P ++ L +VVCG +T + S G+L++WG G
Sbjct: 111 WGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQ 170
Query: 320 LGIG 323
G G
Sbjct: 171 TGHG 174
>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
Length = 620
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 156/305 (51%), Gaps = 25/305 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K+DI + G I++ + F ++G+ ++G+LGLGS + +P A +
Sbjct: 73 SKFWFKRDIPISLSCGDEHTAITTGNNKLF--MFGSNNWGQLGLGSKATVNKPTCIKALK 130
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
+K +ACG HTL LT G VYATG N+ GQLG+ E + L S K +
Sbjct: 131 PEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IK 188
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAAL 184
Q+S G + S+A+T +GELY +G+ +G+LGL K +P + + GI K Q A
Sbjct: 189 QLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVP---QLVPGISEKVIQVAC 245
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G +V +T V ++G G G+LG G F TSE P++I+ ++ K+
Sbjct: 246 GGGHTVVLTEKA-VYTFGLGQFGQLGLGT------FTFETSE--PKVIESVKDKKISHVC 296
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK-LPYSEEVV-CGGYHT 300
G H+A I E+G +Y FGD K+ N + P+L S L Y +V CGG H
Sbjct: 297 CGENHTALITESGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLKYIVHLVACGGCHM 356
Query: 301 CVLTS 305
V +
Sbjct: 357 LVFAT 361
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTC 301
+ G H+A N ++++FG ++ +P+ I L + V CG HT
Sbjct: 86 SCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHTL 145
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
+LT GG++Y G N G LG+G
Sbjct: 146 ILTGGGQVYATGGNNEGQLGLG 167
>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
Length = 2770
Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats.
Identities = 85/281 (30%), Positives = 134/281 (47%), Gaps = 21/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YGRLG GS +R PV S + S A++ H++ L G ++ G N+ GQ
Sbjct: 292 WGYNYYGRLGDGSTINRIVPVQVSGLTEVS--AISAAFGHSMALKSDGTLWTWGYNNRGQ 349
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +I SL P+++ V IS GY +S A+ DG ++ WG+N GQ G
Sbjct: 350 LG-NNSITQSLVPVQV---LTGVASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTID 405
Query: 163 KVIPIPTKVECLSGI--FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++PI +V L+G+ + ++ + S+A+ G V WG +G+LG+
Sbjct: 406 SLVPI--QVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQLGNNS------- 456
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P L GV V I +AG HS + +G +I+G + ++ +
Sbjct: 457 --ATQSLVPVQALGLTGV-VSI-SAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLV 512
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P + L + G YH+ L S G ++ WG N +G LG
Sbjct: 513 PVQVPGLSGVSAISAGNYHSMALKSDGTVWAWGRNSSGQLG 553
Score = 105 bits (262), Expect = 3e-20, Method: Composition-based stats.
Identities = 84/279 (30%), Positives = 124/279 (44%), Gaps = 17/279 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG LG S + PV S + ++ G H++ L G V+A G N GQ
Sbjct: 710 WGDNAYGMLGNNSTVTSSIPVQVSGLT--GVSSVKAGRLHSMALKSDGTVWAWGYNTEGQ 767
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+++SGL+ +V+ IS G +HS I DG ++ WG+NSNGQLG
Sbjct: 768 LG-DGSTTQRLVPVQVSGLE-DVIAISAGDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTG 825
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++P+ +V L+G+ A G S AV G L+WG+ G+L G
Sbjct: 826 SLVPV--QVPGLTGVALISA--GTNTSAAVKSDGTALAWGSNTYGQLCDGS--------- 872
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P + E GV HS + +G V+ G + ++ P
Sbjct: 873 NIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPV 932
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
L + G YH+ L S G ++ WG N G LG
Sbjct: 933 QTLGLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLG 971
Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 27/252 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ G H L L G V+A G N +G+LG I + P+++SGL EV IS + HS
Sbjct: 273 VVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTIN-RIVPVQVSGL-TEVSAISAAFGHS 330
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG L+ WG N+ GQLG ++P V+ L+G+ + A G++ S+AV
Sbjct: 331 MALKSDGTLWTWGYNNRGQLGNNSITQSLVP----VQVLTGVASISA--GYDYSLAVKSD 384
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--FLHSACI 253
G V +WG G+ G+ + P + L GV A + + HS +
Sbjct: 385 GTVWAWGRNYYGQFGNNS---------TIDSLVPIQVSGLTGVTSISATSSNNYSHSLAL 435
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLIS----KLPYSEEVVCGGYHTCVLTSGGEL 309
+G V+ +G + ++ GN++ SL+ L + G H+ L S G
Sbjct: 436 KSDGTVWGWGYNSTGQL----GNNSATQSLVPVQALGLTGVVSISAGSNHSMALKSDGTA 491
Query: 310 YTWGSNENGCLG 321
+ WG N +G LG
Sbjct: 492 WIWGGNSDGQLG 503
Score = 94.0 bits (232), Expect = 9e-17, Method: Composition-based stats.
Identities = 91/301 (30%), Positives = 136/301 (45%), Gaps = 39/301 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGG-AHTLFLTETGCVYATGLNDF 100
WG YG+ G S P+ S S+ A + +H+L L G V+ G N
Sbjct: 390 WGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNST 449
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG + + SL P++ GL VV IS G +HS A+ DG ++WG NS+GQLG
Sbjct: 450 GQLG-NNSATQSLVPVQALGLTG-VVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNST 507
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A ++P+ +V LSG+ A G S+A+ G V +WG SG+LG+
Sbjct: 508 AQSLVPV--QVPGLSGVSAISA--GNYHSMALKSDGTVWAWGRNSSGQLGNNS------- 556
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P I+ L G +AG HS + +G V+ +G+ K++
Sbjct: 557 --TTVSLVP--IQVLTGTTS--VSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLV 610
Query: 281 P------SLISK-----LPYSEEVVC------GGY-HTCVLTSGGELYTWGSNENGCLGI 322
P + IS +P S+E+ G Y ++ L S ++ WG +G LG
Sbjct: 611 PVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGN 670
Query: 323 G 323
G
Sbjct: 671 G 671
Score = 84.3 bits (207), Expect = 7e-14, Method: Composition-based stats.
Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 17/286 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG S PV A + +++ G H++ L G + G N GQ
Sbjct: 444 WGYNSTGQLGNNSATQSLVPV--QALGLTGVVSISAGSNHSMALKSDGTAWIWGGNSDGQ 501
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + SL P+++ GL V IS G +HS A+ DG ++ WG+NS+GQLG
Sbjct: 502 LG-NNSTAQSLVPVQVPGLSG-VSAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTTV 559
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++PI + L+G T + G S+A+ G V WG ++ L ++
Sbjct: 560 SLVPI----QVLTG--TTSVSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLVPVK 613
Query: 223 ST-----SEYTPRLIKELEGVKVKIAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ S++ + + +K ++G + +S + + V+ +G + G
Sbjct: 614 TAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGNGTG 673
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L E++ G H+ L S G + WG N G LG
Sbjct: 674 EQMLVGYPVRDLTGVEQISAGEGHSLALRSDGTAWAWGDNAYGMLG 719
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/260 (28%), Positives = 101/260 (38%), Gaps = 55/260 (21%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R PV S E + A++ G H++ + G V+A G N GQ
Sbjct: 760 WGYNTEGQLGDGSTTQRLVPVQVSGLE--DVIAISAGDYHSMVIKSDGTVWAWGRNSNGQ 817
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + G SL P+++ GL V IS G + S+A+ DG WG N+ GQL G
Sbjct: 818 LGNNSTTG-SLVPVQVPGLTG-VALISAGTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQ 875
Query: 163 KVIPI----PTKVECLSGIFTKQAAL---------------------------------- 184
++IP+ P V LS + +L
Sbjct: 876 RLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPVQTL 935
Query: 185 ----------GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
G S+A+ G + WG G G+LG +S L + S + P
Sbjct: 936 GLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAPVASKRWFFPDDYLN 995
Query: 235 LEGVKVKIAAAGFLHSACID 254
L G A G S ID
Sbjct: 996 LGG---GYEAPGTFESGTID 1012
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG+ YG+L GS R PV S ++ +H+L L G V+ G ND
Sbjct: 857 ALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRND 916
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G +G + +I S P++ GL VV IS G +HS A+ DG ++ WG N GQLG
Sbjct: 917 YGPIG-NNSITDSKVPVQTLGLAG-VVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNS 974
Query: 160 KAAKVIPIPTK 170
+++ P+ +K
Sbjct: 975 TTSRLAPVASK 985
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 82/300 (27%), Positives = 129/300 (43%), Gaps = 45/300 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPV---------------VCSAFEKHSLKALACGGAH--TLF 85
WGN +Y ++ + + PV V S+ E S+ A + GG++ +L
Sbjct: 592 WGNNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSI-ATSSGGSYGYSLA 650
Query: 86 LTETGCVYATGLNDFGQLGISEN----IGYSLEPLR-ISGLKKEVVQISTGYHHSSAITV 140
L V+A G G LG +GY P+R ++G++ QIS G HS A+
Sbjct: 651 LKSDKTVWAWGYGGSGVLGNGTGEQMLVGY---PVRDLTGVE----QISAGEGHSLALRS 703
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
DG + WG N+ G LG IP+ +V L+G+ + +A G S+A+ G V +
Sbjct: 704 DGTAWAWGDNAYGMLGNNSTVTSSIPV--QVSGLTGVSSVKA--GRLHSMALKSDGTVWA 759
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G+LG G +T P + LE V + I+A + HS I +G V+
Sbjct: 760 WGYNTEGQLGDGS---------TTQRLVPVQVSGLEDV-IAISAGDY-HSMVIKSDGTVW 808
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
+G + ++ + P + L + G + + S G WGSN G L
Sbjct: 809 AWGRNSNGQLGNNSTTGSLVPVQVPGLTGVALISAGTNTSAAVKSDGTALAWGSNTYGQL 868
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 30/235 (12%)
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
+G N G + + I + + +I ++++ Q+ GY+H+ A+ DG ++ WG N G+
Sbjct: 241 SGFNLAGNVKANTMINGTADNAKIE-IQEKYAQVVAGYYHNLALKSDGTVWAWGYNYYGR 299
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G +++P+ +V L+ + AA G S+A+ G + +WG G+LG+
Sbjct: 300 LGDGSTINRIVPV--QVSGLTEVSAISAAFG--HSMALKSDGTLWTWGYNNRGQLGN--- 352
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+SI T P ++ L GV +AG+ +S + +G V+ +G Q
Sbjct: 353 NSI------TQSLVP--VQVLTGVAS--ISAGYDYSLAVKSDGTVWAWGRNYYG----QF 398
Query: 275 GNHARRPSLI-------SKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLG 321
GN++ SL+ + + Y H+ L S G ++ WG N G LG
Sbjct: 399 GNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQLG 453
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 135/305 (44%), Gaps = 18/305 (5%)
Query: 26 ICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
+C W +ST ++ +WG D +LG P +C K +A G T F
Sbjct: 546 LCTLWENSTNKQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFF 605
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDG 142
+T G +Y+ G + FG+LGI + G P ++GL + + V + +G +H A+T DG
Sbjct: 606 ITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDG 665
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ WG NGQLG G + P +E G + G S A+ + +WG
Sbjct: 666 LAFSWGDGENGQLGHGNLMS--CSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWG 723
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVY 260
G GRLGHG E +IL P+ + G V + G + CI ++ +V+
Sbjct: 724 LGDFGRLGHGDEETIL---------QPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVW 774
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+GD K+ P + +L + +++CG T LT G ++TWG +
Sbjct: 775 SWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFY 834
Query: 319 CLGIG 323
LG G
Sbjct: 835 RLGHG 839
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 136/287 (47%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G+ G+LGLG E+ P + + + ++K ++ GG H L L+ G V++ G + G
Sbjct: 1500 GYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDG 1559
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N S +P RI K + I G HS+AI ++GELY WGK G+LG G
Sbjct: 1560 KLG-HGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDS 1618
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +VE L F A G Q++ +T V SWG G G+LG G
Sbjct: 1619 DDQLKP--KQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGG----- 1671
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P +I++L G + G S + + G +Y +G ++ H
Sbjct: 1672 ----SDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHV 1727
Query: 279 RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP +++ L + CG H V T GE+Y WG N+ G LG G
Sbjct: 1728 RRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDG 1774
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 137/273 (50%), Gaps = 21/273 (7%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A WG+G+ G+LG G+L S +P + AF + ++CG AH+ + E +Y GL
Sbjct: 666 LAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLG 725
Query: 99 DFGQL--GISENIGYSLEPLRISG-LKKEVVQISTGYHHSSA--ITVDGELYMWGKNSNG 153
DFG+L G E I L+P ++ L VVQ+S G + IT D +++ WG G
Sbjct: 726 DFGRLGHGDEETI---LQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFG 782
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G +IP+ +VE L G+ + G + +VA+T G V +WG G RLGHG
Sbjct: 783 KLGRGGSERCLIPV--EVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGT 840
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ + P+L++ L G V A G LH + ++G V+ +GD ++
Sbjct: 841 DIHV---------RQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTG 891
Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLT 304
E + + P+LI+ L + V CG H+ T
Sbjct: 892 ETDVKKVPNLITGLHNHRIKYVACGSSHSIAWT 924
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 18/287 (6%)
Query: 44 GNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G +G+LG+G + + P + + + + ++ GG H + LT G ++ G +
Sbjct: 616 GESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGEN 675
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG + S L + + K V IS G HS+AI + LY WG G+LG G +
Sbjct: 676 GQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDE 735
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ I P V G Q + G Q+V +T KV SWG G G+LG G L
Sbjct: 736 --ETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCL 793
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
P +++L G+++ G + + + G V+ +G ++ H
Sbjct: 794 ---------IPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHV 844
Query: 279 RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P L+ L + ++ G H +T GE+++WG N++G LG G
Sbjct: 845 RQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTG 891
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 21/245 (8%)
Query: 87 TETGCVYATGLNDFGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDG 142
T+ V+ATG + GQLG+ SE + LE ++ +KK + + +G H A++ DG
Sbjct: 1491 TDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKK--ISVHSGGRHCLALSSDG 1548
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E++ WG+ +G+LG G + P ++E G G S A+ G++ +WG
Sbjct: 1549 EVFSWGEGEDGKLGHGNRQTS--SQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWG 1606
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVY 260
G GRLGHG S + P+ ++ L+ V A +G + CI + V+
Sbjct: 1607 KGRYGRLGHGD---------SDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVW 1657
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENG 318
+GD K+ + + P +I L +V CG + LT G LYTWG +
Sbjct: 1658 SWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYY 1717
Query: 319 CLGIG 323
LG G
Sbjct: 1718 RLGHG 1722
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P++ + + CG ++ LT+ G +Y G D+ +
Sbjct: 1659 WGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYR 1718
Query: 103 L--GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ P+ ++ L K V IS G H T +GE+Y WG N GQLG G
Sbjct: 1719 LGHGTEEHVR---RPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGT 1775
Query: 160 KAAKVIP 166
A+ P
Sbjct: 1776 IIARQTP 1782
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G+ E RP++ +A + +++CG H + T+ G VY G ND GQ
Sbjct: 1711 WGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQ 1770
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
LG I L L K++ +IS G H+ A
Sbjct: 1771 LGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE---TGCVYATGLN 98
WG+ D+G+LG G + + P + + H +K +ACG +H++ TE + C+ L+
Sbjct: 880 WGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWTEITTSACIIDKPLS 938
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3228 TWGKGDYFRLGHG 3240
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3125 LGEYGRLGHG 3134
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4070 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3228 TWGKGDYFRLGHG 3240
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3125 LGEYGRLGHG 3134
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4070 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3228 TWGKGDYFRLGHG 3240
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3125 LGEYGRLGHG 3134
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4070 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
partial [Ciona intestinalis]
Length = 2540
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 149/296 (50%), Gaps = 39/296 (13%)
Query: 44 GNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLN 98
G G YGRLGLG + +S + +V +++ ++ HTL LT GC+++ G
Sbjct: 340 GKGSYGRLGLGDSNNQSTLKTIVFDP--PQTIRKISSSKGSDGHTLALTTEGCIFSWGDG 397
Query: 99 DFGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
D+G+LG ++ + P I G ++ VV +S GY HS+ +T +G+L+ WG+ G+LG
Sbjct: 398 DYGKLGHGSSLTHK-SPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRLG 456
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQES 215
LG ++ +P+ K +G G ++ + G V S+GAG +G+LGHG S
Sbjct: 457 LGDNTSRNVPVLVKDIASAG----SVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTS 512
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV------DK 269
+ Y P++I+ + G+ AG +S ++++G+V+ +G A D
Sbjct: 513 RV---------YRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDA 563
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+P+LI +L ++ ++ G H LT E+Y WG+N G G+G
Sbjct: 564 TFM-------KPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLG 612
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 92/236 (38%), Gaps = 58/236 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---------- 92
WG GDYGRLGLG SR PV+ S ++ CG +HTL L + G
Sbjct: 447 WGEGDYGRLGLGDNTSRNVPVLVKDIA--SAGSVVCGSSHTLVLAQDGLTVWSFGAGDNG 504
Query: 93 --------------------------------YATGLNDFGQ---------LGISENIGY 111
Y+ LND GQ LG
Sbjct: 505 KLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDAT 564
Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
++P I L VV I++G H A+T + E+Y WG N+ GQ GLG + I +PT+
Sbjct: 565 FMKPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNSP-ISVPTQ 623
Query: 171 VECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSILGFLRS 223
V+ L+ + Q + G S+A T V+SW L + FL S
Sbjct: 624 VQQLNNVTIHQISAGTSHSIAYTAMPSDRHVISWSRPYCVDLSESTFKKMNNFLSS 679
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG GS + P ++ + + ++ G H+ +T+ G ++ G D+G
Sbjct: 394 WGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYG 453
Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGELYMW--GKNSNGQLG 156
+LG+ +N + + L K++ + G H+ + DG L +W G NG+LG
Sbjct: 454 RLGLGDNTSRN-----VPVLVKDIASAGSVVCGSSHTLVLAQDG-LTVWSFGAGDNGKLG 507
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P +E ++G+ + G + S+A+ G+V SWG G LG G +
Sbjct: 508 HGDTSR--VYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGAC--LGCGSPDA 563
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
F++ P LI EL +V +G H + N VY +G+ A+
Sbjct: 564 T--FMK------PTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAM 606
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 61/259 (23%)
Query: 121 LKKEVVQISTGYHHSSAITV-------DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
L ++VV +S Y S T + ++Y WG NS+ QL + + I P KV+
Sbjct: 256 LMEQVVSLSEEYAISCTETATKSVDMNNCDVYAWGSNSSHQLA--ELGSDKIVFPKKVKS 313
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
++ G + AV+G G V S G G GRLG G +S+ L++ P+ I+
Sbjct: 314 FGN--SQMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLG-DSNNQSTLKTIVFDPPQTIR 370
Query: 234 ELEGVK------------------------------------------------VKIAAA 245
++ K V +A
Sbjct: 371 KISSSKGSDGHTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSA 430
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
G+ HSAC+ + G+++ +G+ ++ + P L+ + + VVCG HT VL
Sbjct: 431 GYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNVPVLVKDIASAGSVVCGSSHTLVLAQ 490
Query: 306 GG-ELYTWGSNENGCLGIG 323
G ++++G+ +NG LG G
Sbjct: 491 DGLTVWSFGAGDNGKLGHG 509
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3228 TWGKGDYFRLGHG 3240
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3125 LGEYGRLGHG 3134
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4070 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3228 TWGKGDYFRLGHG 3240
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3125 LGEYGRLGHG 3134
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4070 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3228 TWGKGDYFRLGHG 3240
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3125 LGEYGRLGHG 3134
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4070 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 1401
Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats.
Identities = 89/281 (31%), Positives = 134/281 (47%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G+ +R+ PV + A+A GG H+L L G V+A G N +GQ
Sbjct: 91 WGDNYYGQLGDGTTTNRYTPVQVQNLT--GVVAIAAGGGHSLALKSDGTVWAWGYNGYGQ 148
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I P+++ L V + G H S A+ DG ++ WG N GQLG G
Sbjct: 149 LG-DGTITNRTTPVQVKNLTGVVAVAAGGGH-SLALKSDGTVWAWGYNGYGQLGDGTTMN 206
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ L+G+ A G S+A+ G V +WG G G+LG G
Sbjct: 207 RYTPV--QVQNLTGVVA--IAAGSSHSLALKSDGTVWAWGNNGYGQLGDGT--------- 253
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T+ TP ++ L V AAG HS + +G V+ +G ++ + P
Sbjct: 254 TTNRTTPVRVQGL--TDVVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTPV 311
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + GG H+ L S G ++ WG+N+ G LG G
Sbjct: 312 QVQNLTGVVAIAAGGGHSLALKSDGTVWAWGNNDWGELGDG 352
Score = 94.0 bits (232), Expect = 8e-17, Method: Composition-based stats.
Identities = 78/249 (31%), Positives = 115/249 (46%), Gaps = 17/249 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A+ G ++L L G V+A G N +GQLG P+++ L VV I+ G H
Sbjct: 71 AVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTN-RYTPVQVQNLTG-VVAIAAGGGH 128
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ DG ++ WG N GQLG G + P+ K + A G S+A+
Sbjct: 129 SLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQVK----NLTGVVAVAAGGGHSLALKS 184
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG G + + YTP ++ L GV V IAA G HS +
Sbjct: 185 DGTVWAWGYNGYGQLGDGT---------TMNRYTPVQVQNLTGV-VAIAA-GSSHSLALK 233
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
+G V+ +G+ ++ + P + L + G H+ L S G ++TWG
Sbjct: 234 SDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQGLTDVVAIAAGNEHSLALKSDGTVWTWGW 293
Query: 315 NENGCLGIG 323
N +G LG G
Sbjct: 294 NYSGQLGDG 302
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 71/248 (28%), Positives = 108/248 (43%), Gaps = 32/248 (12%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A GGA +L + G V+A G G + ++G VV + G +S
Sbjct: 37 IAAGGARSLAIKSDGTVWAWG-------------GTPVPVQNLTG----VVAVEAGSFYS 79
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N GQLG G + P+ +V+ L+G+ A G S+A+
Sbjct: 80 LALKSDGTVWAWGDNYYGQLGDGTTTNRYTPV--QVQNLTGVVAIAAGGG--HSLALKSD 135
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G G+LG G T+ TP +K L GV A G HS +
Sbjct: 136 GTVWAWGYNGYGQLGDGT---------ITNRTTPVQVKNLTGVVAVAAGGG--HSLALKS 184
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G V+ +G ++ + P + L + G H+ L S G ++ WG+N
Sbjct: 185 DGTVWAWGYNGYGQLGDGTTMNRYTPVQVQNLTGVVAIAAGSSHSLALKSDGTVWAWGNN 244
Query: 316 ENGCLGIG 323
G LG G
Sbjct: 245 GYGQLGDG 252
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG G+ +R PV + A+A G H+L L G V+ G N GQ
Sbjct: 241 WGNNGYGQLGDGTTTNRTTPVRVQGLT--DVVAIAAGNEHSLALKSDGTVWTWGWNYSGQ 298
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+++ L VV I+ G HS A+ DG ++ WG N G+LG G +
Sbjct: 299 LGDGTTTN-RYTPVQVQNLTG-VVAIAAGGGHSLALKSDGTVWAWGNNDWGELGDGTRTD 356
Query: 163 KVIPI 167
+ P+
Sbjct: 357 RHTPV 361
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 60/198 (30%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V+I+ G S AI DG ++ WG P+P V+ L+G+ +A G
Sbjct: 35 VKIAAGGARSLAIKSDGTVWAWGGT---------------PVP--VQNLTGVVAVEA--G 75
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S+A+ G V +WG G+LG G +T+ YTP ++ L GV V IAA
Sbjct: 76 SFYSLALKSDGTVWAWGDNYYGQLGDGT---------TTNRYTPVQVQNLTGV-VAIAAG 125
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
G HS + +G V+ +G ++ + P + L V GG H+ L S
Sbjct: 126 GG-HSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQVKNLTGVVAVAAGGGHSLALKS 184
Query: 306 GGELYTWGSNENGCLGIG 323
G ++ WG N G LG G
Sbjct: 185 DGTVWAWGYNGYGQLGDG 202
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 125/247 (50%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVSCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +VV G H LT E+Y
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVY 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4296 RPRLVAALQGKKINRVACGSAHT 4318
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3250 -------RKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVSWTT 3330
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT G+LY WGK G+LG G ++ P VE
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L GV V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4196 IDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 134/289 (46%), Gaps = 22/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H + LT G V++ G D
Sbjct: 3021 GEATNGRLGLG-LSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3079
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3080 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3138
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3139 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3193
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3194 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3247
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3248 HVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3296
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 121/243 (49%), Gaps = 26/243 (10%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYM 146
V+ GLND QLG G +++ + VVQ++ G A+TV+G++Y
Sbjct: 2965 VFVWGLNDKDQLG-----GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3019
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G+ +NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GKV SWG G
Sbjct: 3020 CGEATNGRLGLGLSSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3078
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGH F R + PRLI+ L+ +++ A G HSA I +G +Y +G
Sbjct: 3079 DDGKLGH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL 3129
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCL 320
++ + +P ++ L +V CG T LT G +++WG + G L
Sbjct: 3130 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3189
Query: 321 GIG 323
G G
Sbjct: 3190 GRG 3192
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 25/256 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
+ P+L++ L+G KV AG H + E+ VY +G + D +
Sbjct: 696 EHV---------RYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTL 746
Query: 271 LFQEGNHARRPSLISK 286
+ + P L SK
Sbjct: 747 RITKPDPTALPGLDSK 762
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 127/278 (45%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYN-------SDILG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4187 SDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYSWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3232 TWGKGDYFRLGHG 3244
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SVATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G L S + PR I L VK A +G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL 3066
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYS 3126
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3127 WGLGEYGRLGHG 3138
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G +Y +G
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 4126
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4285
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4286 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4320
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + + G H L LTE VY+ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ +P + GL K +V I+ G S A
Sbjct: 742 HFDTLRITKP-----DPTALPGLDSKHIVGIACGPAQSFA 776
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 67/177 (37%), Gaps = 47/177 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
K+ + RP +I L E ++ GG H+ +T+ G+LYTWG G LG G
Sbjct: 4075 KLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHG 4131
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 2899 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGR 2958
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 2959 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRG- 3016
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P KV+ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3017 -GSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3073
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3074 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3126
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 3127 RPRLVAALQGKKVNRVACGSAHT 3149
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 1906 WGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1965
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L VVQ++ G + A+T +G ++ WG G+LG G
Sbjct: 1966 LGHGDNT-TQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2023
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2024 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2080
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 2081 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 2129
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2130 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2161
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 131/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 1852 GEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDD 1911
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG +P I LK + + I+ G HS+A+T GELY WG G+LG G
Sbjct: 1912 GKLGHFSRXNCD-KPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 1970
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 1971 NTTQLKPKMVKV--LVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2024
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2025 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2079
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 2080 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 2127
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 134/290 (46%), Gaps = 23/290 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P C A L GG TLF +T G +YATG G
Sbjct: 2793 WGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQL-IGGEQTLFAVTADGKLYATGYGAGG 2851
Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 2852 RLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2909
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 2910 GNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSD---- 2963
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L+G +V A +G + C+ E+ V+ +GD K+
Sbjct: 2964 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGS 3018
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P + L + +V CG + LT G +YTWG + LG G
Sbjct: 3019 DGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3068
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 119/274 (43%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 2859 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 2917
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G LY WGK G+LG ++ P VE
Sbjct: 2918 PRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 2975
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 2976 LQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3026
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
+ L G+ G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3027 VDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3086
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 3087 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3120
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 1834 GGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRH 1893
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+T DG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 1894 ATALTADGKVFSWGEGDDGKLGHFSRXN--CDKPRLIEALKSRRIRDIACGSSHSAALTS 1951
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 1952 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLA 2002
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2003 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2062
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2063 TWGKGDYFRLGHG 2075
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1788 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNAVQVAGGSKSLFAVTVE 1845
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVK-----KVAVHSGG-RHATALTA 1899
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 1900 DGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWG 1959
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 1960 LGEYGRLGHG 1969
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 111/242 (45%), Gaps = 19/242 (7%)
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G VY G N GQLG E + P L Q+ G A+T DG+LY
Sbjct: 2787 SGTVYGWGHNHRGQLGGVEGAKVKV-PTPCEALAALRPAQLIGGEQTLFAVTADGKLYAT 2845
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
G + G+ LG + + PT +E + +F K+ A+ G + +A++ G+V SWG
Sbjct: 2846 GYGAGGR--LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2903
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 2904 DGKLGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKG 2954
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
++ + +P L+ L +V CG T LT +++WG + G LG
Sbjct: 2955 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLG 3014
Query: 322 IG 323
G
Sbjct: 3015 RG 3016
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3057 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 3116
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 3117 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 3151
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 81 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 140 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 248
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 16/250 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L+ T ++ G N G LG+ + + ++EP R+ L K++ +S G H
Sbjct: 59 AGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIV 117
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE++ WG N+ QLG G ++P LS + A G S+ +T G
Sbjct: 118 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDG 176
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + L+ V A G + + +
Sbjct: 177 EVFAWGYNNSGQVGSGS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD 227
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
G VY++G ++ + P ++ L + V CG HT VLT G++Y WG
Sbjct: 228 TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287
Query: 314 SNENGCLGIG 323
+N G LG G
Sbjct: 288 ANSYGQLGTG 297
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3228 TWGKGDYFRLGHG 3240
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3125 LGEYGRLGHG 3134
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4070 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
Length = 719
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 135/281 (48%), Gaps = 20/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ +R PV+ H + + G ++ L + G V+ G N+ GQ
Sbjct: 57 WGYGDRGQLGDGTWNTRTTPVMAKNL-NHVID-IHSGVRSSMALRQDGTVWTWGANENGQ 114
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI I P ++ GL + IS G +H A++ +G ++ WGKN NG+LG G
Sbjct: 115 LGIG-TITNVNAPAQVPGLSG-IKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTT 172
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V LS + T AA G+ S+A+ G V +WG GSG LG G
Sbjct: 173 QQNSPV--LVAGLSDV-TAIAAGGY-YSLALKSDGTVWAWGVNGSGELGDGT-------- 220
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T + P + L V AAG HS I ++G V+ +G+ + H RP
Sbjct: 221 -TTERHVPVQVAGL--TDVMAIAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTRTHRTRP 277
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ L + V GGYH+ + G +++WG N LG+
Sbjct: 278 VQVRNLQHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGL 318
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 139/282 (49%), Gaps = 20/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFG 101
WG + G+LG+G++ + P +KA++ G A H + L+E G V+ G ND G
Sbjct: 107 WGANENGQLGIGTITNVNAPAQVPGLS--GIKAISGGLAYHGMALSENGTVWTWGKNDNG 164
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + P+ ++GL +V I+ G ++S A+ DG ++ WG N +G+LG G
Sbjct: 165 ELGNGTTTQQN-SPVLVAGLS-DVTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTT 222
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P+ +V L+ + A G S+A+ G V +WG G LG G
Sbjct: 223 ERHVPV--QVAGLTDVMA--IAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTR------- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T P ++ L+ + V +A G+ HS +D+ G V+ +GD + ++ + P
Sbjct: 272 --THRTRPVQVRNLQHI-VAVAGGGY-HSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIP 327
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + E+ GG+H+ + G ++ WG N G LG G
Sbjct: 328 VPVTGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDG 369
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 110/233 (47%), Gaps = 19/233 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG G+ R PV + + A+A GG+H+L + + G V+A G N +G
Sbjct: 208 WGVNGSGELGDGTTTERHVPVQVAGLTD--VMAIAAGGSHSLAIRQDGTVWAWGNNTYGT 265
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ L + +V ++ G +HS A+ G ++ WG NS QLGL A+
Sbjct: 266 LGDGTRT-HRTRPVQVRNL-QHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNAS 323
Query: 163 KVIPIP-TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+IP+P T +E + I +A GF SVA+ G V WG G+LG G ++ G
Sbjct: 324 SLIPVPVTGIEHVREI----SAGGF-HSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRGI- 377
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
P L K + +G L+ I + V + +A D M Q
Sbjct: 378 -------PTLTKAVLDTTSPDTGSGSLNPHSITSD-SVALEWPKASDNMTEQH 422
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
++ GY+H++++ GE+Y WG GQLG G + P+ K L+ + + G
Sbjct: 37 KLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAK--NLNHVIDIHS--GV 92
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A+ G V +WGA +G+LG G +++ P + L G+K I+
Sbjct: 93 RSSMALRQDGTVWTWGANENGQLGIGTITNV---------NAPAQVPGLSGIKA-ISGGL 142
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
H + ENG V+ +G ++ P L++ L + GGY++ L S
Sbjct: 143 AYHGMALSENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSDVTAIAAGGYYSLALKSD 202
Query: 307 GELYTWGSNENGCLGIG 323
G ++ WG N +G LG G
Sbjct: 203 GTVWAWGVNGSGELGDG 219
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
T + G+ + ++ G+V SWG G G+LG G + + TP + K L
Sbjct: 34 VTPKLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWN---------TRTTPVMAKNLNH 84
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG- 296
V + I +G S + ++G V+ +G ++ + P+ + L + + G
Sbjct: 85 V-IDI-HSGVRSSMALRQDGTVWTWGANENGQLGIGTITNVNAPAQVPGLSGIKAISGGL 142
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
YH L+ G ++TWG N+NG LG G
Sbjct: 143 AYHGMALSENGTVWTWGKNDNGELGNG 169
>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
Length = 345
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 139/299 (46%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG HT +T +G +Y G ++
Sbjct: 336 WGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNY 395
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 396 GLLGHGNQVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHG 454
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P ++E L G+ T QAA G + AV GK+ +WG G
Sbjct: 455 DR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 512
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S L P + L ++A G + + +G VY G
Sbjct: 513 GRLGHGDKESKL---------VPTCVVTLVEPNCQVAC-GHSMTVALSRSGHVYTMGSCV 562
Query: 267 VDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + KL S EE+ CG YH VLTS E++TWG NG LG G
Sbjct: 563 YGQLGNTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHG 621
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + + VT G+V SWG GRLGHG +S +
Sbjct: 302 LPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVP-------- 353
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI+ L +++ A G H+ + +G +Y +GD + L GN P +
Sbjct: 354 -HPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRV 412
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT V+TS G+L+T+G G LG G
Sbjct: 413 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHG 454
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3352 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3411
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 3412 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3469
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3470 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3526
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3527 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3579
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 3580 RPRLVAALQGKKVNRVACGSAHT 3602
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2360 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2419
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2420 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2477
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2478 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2534
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 2535 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2583
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2584 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2615
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2306 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2365
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2366 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2424
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2425 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2478
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2479 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2533
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 2534 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 2581
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3312 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3370
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3371 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3428
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 3429 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3479
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3480 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3539
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 3540 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3573
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3246 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3303
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3304 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3361
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3362 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3416
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3417 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3470
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 3471 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3521
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2288 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2347
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2348 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2405
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2406 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2456
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2457 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2516
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2517 TWGKGDYFRLGHG 2529
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2242 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2299
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 2353
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 2354 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2413
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 2414 LGEYGRLGHG 2423
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3241 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3299
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3300 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3359
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3360 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3410
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3411 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3469
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3510 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 3569
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 3570 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 3604
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3239 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3298
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 3299 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3358
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 3359 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3413
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 138/288 (47%), Gaps = 18/288 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G LGLG +E P S++ ACG +HTL LT+ G +++ G ND
Sbjct: 6 WGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDH 65
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + + P IS L+ +V +S G HS A+T G+++ WG NS GQLG
Sbjct: 66 GQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLG-HD 124
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++ ++ Q A G S+A+T G++ SWGA G G+LG G
Sbjct: 125 TDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLG------- 177
Query: 220 FLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+T E TP L+K L G+ + A G HS + ++G ++ +G ++ +
Sbjct: 178 ---TTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVS 234
Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + CG + LT G ++T G+ G LG G
Sbjct: 235 RCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHG 282
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 136/273 (49%), Gaps = 17/273 (6%)
Query: 44 GNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
GN D+G+LG + L ++ RP S+ E + + ++CG H+L LT G V++ G N G
Sbjct: 61 GNNDHGQLGHDTDCLPNK-RPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIG 119
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ P I + K VVQI++G HS A+T GEL+ WG N GQLGLG
Sbjct: 120 QLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTT 179
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
KV+ PT V+ L+GI A G S AV+ G + WG G+LG
Sbjct: 180 GEKVV-TPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND------- 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P+ +K L + V+ + G SA + + G V+ G ++ ++
Sbjct: 232 --LVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEIL 289
Query: 281 PSLISKLPYSE--EVVCGGYHT-CVLTSGGELY 310
P ++ +L S+ ++ CG HT + S G++Y
Sbjct: 290 PRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 11/183 (6%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG +G+LGLG + + +P +++ +QAA G ++ +T GK+ S G
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + P+ I LE V + G HS + G+V+ +G
Sbjct: 63 NDHGQLGHDTD--------CLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWG 114
Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ ++ P +I + ++ G +H+ LT+ GEL++WG+N G L
Sbjct: 115 SNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQL 174
Query: 321 GIG 323
G+G
Sbjct: 175 GLG 177
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL L SR P ++ ++CG + FLT+ G V+ G FGQ
Sbjct: 219 WGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQ 278
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELY 145
LG L + + ++ QI+ G H+ A + G++Y
Sbjct: 279 LGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322
>gi|418738679|ref|ZP_13295072.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|410745377|gb|EKQ98287.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
Length = 506
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 136/299 (45%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S++P+ + GL +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGK-KAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ AA I P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASDGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQILNIKNASSVWAGGTQSFSILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H L GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 487
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 119/262 (45%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AI +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V IA
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVIA-- 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VY++G + L P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
L S G +Y+WG N +G LGIG
Sbjct: 361 ALASDGRIYSWGLNASGQLGIG 382
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
S IF+ + F Q S+A+ G+V +WG G+LG G ++ R+ P +
Sbjct: 178 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233
Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ G+ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 292 LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNG 328
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASDGRIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P L K + G S +I +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQILNIKNASSVWAGGTQSFSILKNGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + P K V + + G + A+ G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFALLGDGEIYGWGWNFKGSLG 487
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 137/281 (48%), Gaps = 23/281 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
+ G G LG G +S P + +L+ G G H + +T G VY+ G N +
Sbjct: 44 VMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103
Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG + + +L P ++S + K+ ++ G HHS +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162
Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
A + PIP KV CL A G S+AV G+V +WG G+G+LG G
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLG----- 215
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S ++ TP I L+G++V+ G+ H+ + + G +Y +G + ++ GN
Sbjct: 216 ----SSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQL--GTGNK 269
Query: 278 ARRPSLISKLPYSEEVV----CGGYHTCVLTS-GGELYTWG 313
+ + + + E +V C HT S G++Y WG
Sbjct: 270 SNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 116/253 (45%), Gaps = 22/253 (8%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
G L++T+ V+ G N G LG + +EP RI L K +V +S G H
Sbjct: 29 AGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSI-IEPRRIDMLSGKRIVSLSYGSGPHVV 87
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
+T DGE+Y WG N+ QLG G + P + + K+A A G S+ +T
Sbjct: 88 IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAHSVACGSHHSMVLT 143
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
G+V +WG SG++G G + ++ PR + L+ V A G + S
Sbjct: 144 CDGEVYAWGYNNSGQVGSG---------STANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ +NG VY +G ++ + P I+ L E+VVCG HT LT G +Y
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254
Query: 311 TWGSNENGCLGIG 323
WG+N G LG G
Sbjct: 255 AWGANSYGQLGTG 267
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLGS ++ P +A + ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S P+++ K+ +V+I+ + H S+A + G++YMWG+ GQ
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315
Query: 161 AAKVIPIPTKVECLSGIF 178
+ + P T C +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 25/271 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 2166 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 2225
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +NI L+P I L +VQ++ G + A+T +G ++ WG G+LG G
Sbjct: 2226 LGHGDNIT-QLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG- 2283
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+ + Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 2284 -GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV-- 2340
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P +I+ L+ KV A G LH + + G+VY +GD Q+GN
Sbjct: 2341 -------RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 2389
Query: 279 ---RRPSLISKLP--YSEEVVCGGYHTCVLT 304
R+P+L+ L + V CG H+ T
Sbjct: 2390 IVNRKPALVHGLEDVHINRVACGSSHSIAWT 2420
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ + P + A + + + +ACGGAH+ +T TG +Y G +G+
Sbjct: 3142 WGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGR 3201
Query: 103 LGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P I G K V +G + IT D ++ WG G+LG G
Sbjct: 3202 LGHGDSED-QLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 3259
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG
Sbjct: 3260 -GSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG------- 3311
Query: 220 FLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T E+ P+ + L+G K+ A G LH + G V+ +GD ++ N
Sbjct: 3312 ----TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNA 3367
Query: 278 ARRPSLISKLPYSE--EVVCGGYHT 300
+RP L+S L + V CG HT
Sbjct: 3368 IQRPRLVSALQGKKITNVACGSAHT 3392
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 133/287 (46%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H + LT G V++ G + G
Sbjct: 2113 GEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 2172
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ K++ I+ G HS+AIT GELY WG G+LG G
Sbjct: 2173 KLGHGNRLNLD-KPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 2231
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P ++ L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2232 ITQL--KPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGG----- 2284
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P I+ L ++V G S + + G V+ +G ++ H
Sbjct: 2285 ----SEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 2340
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P++I L + V G H +T G++Y WG N++G G G
Sbjct: 2341 RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 2387
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 121/267 (45%), Gaps = 19/267 (7%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P + + + +K +A GG H L L+ VY+ G D G+LG + P I
Sbjct: 3107 PTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACE-TPKLIE 3165
Query: 120 GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L+ E++ I+ G HS+AIT G+LY WGK G+LG G ++ P +E L G
Sbjct: 3166 ALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKP--KLIEELVGYK 3223
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G Q++ +T V SWG G G+LG G S P+ I+ L
Sbjct: 3224 VIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG---------SDGCKVPKKIESLA 3274
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
G+ V G S + +G VY +G ++ G H RRP ++ L + +
Sbjct: 3275 GLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIA 3334
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLG 321
G H + GE++TWG N+ G LG
Sbjct: 3335 TGSLHCVACSDEGEVFTWGDNDEGQLG 3361
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G VYATG
Sbjct: 3036 WGHNHRGQLGGIEGAKVKIPTPCEALS--TLRPVQLVGGEQTLFAVTADGKVYATGYGAG 3093
Query: 101 GQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI + LE ++ +KK + +++G H A++ D ++Y WG+ +G+LG
Sbjct: 3094 GRLGIGGTDSVLVPTLLESIQHVFIKK--IAVNSGGKHCLALSADNDVYSWGEGDDGKLG 3151
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + A P +E L G A G S A+T G++ +WG G GRLGHG
Sbjct: 3152 HGNRLA--CETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD--- 3206
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+LI+EL G KV A +G + CI ++ V+ +GD K+
Sbjct: 3207 ------SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 3260
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 3261 SDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 3311
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 18/203 (8%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V Q STG S TV +++WG N QLG G K +KV +P + + LS ++ A
Sbjct: 2041 VAQDSTGEPSS---TVGCRVFVWGLNDKDQLG-GMKGSKV-KLPVQSDFLSQLWPIHIAG 2095
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+ GK+ + G G +GRLG G +++ PR I L +K A
Sbjct: 2096 GSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNV---------PYPRPIPFLSQYVIKKVA 2146
Query: 245 --AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
+G H+ + +G+V+ +G+ K+ + +P +I L + ++ CG H+
Sbjct: 2147 VHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHS 2206
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
+TS GELYTWG E G LG G
Sbjct: 2207 AAITSSGELYTWGLGEYGRLGHG 2229
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV IPT E LS + Q G + AVT GKV +
Sbjct: 3031 GTIYGWGHNHRGQLG-GIEGAKV-KIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYAT 3088
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G S+L P L++ ++ V +K A +G H + + V
Sbjct: 3089 GYGAGGRLGIGGTDSVL---------VPTLLESIQHVFIKKIAVNSGGKHCLALSADNDV 3139
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ P LI L E ++ CGG H+ +TS G+LYTWG
Sbjct: 3140 YSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRY 3199
Query: 318 GCLGIG 323
G LG G
Sbjct: 3200 GRLGHG 3205
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG + + RP + SA + + +ACG AHTL
Sbjct: 3352 WGDNDEGQLGDDTTNAIQRPRLVSALQGKKITNVACGSAHTL 3393
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 1100 WGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 1159
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 1160 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 1217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 1218 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 1274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 1275 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 1327
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 1328 RPRLVAALQGKKVNRVACGSAHT 1350
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 107 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 166
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 167 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 224
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 225 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 282 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 330
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 331 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 362
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 53 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 112
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 113 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 171
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 172 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 225
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 226 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 280
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 281 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 328
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 16/234 (6%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GLND QLG + + + VVQ++ G A+TV+G++Y G+ +NG+L
Sbjct: 1 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
GLG + V PIP ++ LS K+ A+ G + A+T GKV SWG G G+LGH
Sbjct: 61 GLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGH-- 117
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
F R + PRLI+ L+ +++ A G HSA + +G +Y +G ++
Sbjct: 118 ------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 170
Query: 274 EGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 171 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 224
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 120/274 (43%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G G+LG N
Sbjct: 1060 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLG-HGNRSPCDR 1118
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 1119 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 1176
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 1177 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 1227
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 1228 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1287
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 1288 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 1321
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 994 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1051
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 1052 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAKDGKLG 1109
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 1110 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 1164
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 1165 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1218
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 1219 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 1269
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 35 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 94
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 95 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 152
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 153 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 203
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 204 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 263
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 264 TWGKGDYFRLGHG 276
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 989 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1047
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 1048 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGK 1107
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 1108 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1158
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 1159 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 1217
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 1258 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 1317
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 1318 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 1352
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 987 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 1046
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 1047 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDG 1106
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 1107 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 1161
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H + TE G VYA G N + QLG + N
Sbjct: 60 LGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTN 119
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+++DG+LY WG N+ GQ+G G A + P P
Sbjct: 120 QGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQ--PTP 177
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL G A G S+AV G+V WG G+G+LG G + L
Sbjct: 178 RRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP + L V V A G+ H+ + + G +Y +G ++ GN + + S + +
Sbjct: 229 TPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPVQIM 286
Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
E VV C HT T G++Y WG
Sbjct: 287 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 123/239 (51%), Gaps = 16/239 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCG 164
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L + Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 224 NGNQL--TPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGDRAVDKMLFQEGNH 277
+ +++ E E V V+IAA H SA ++G+VY++G + F H
Sbjct: 282 PV--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVTFPHLTH 331
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + IT E++++G N + LG G + + +P K+E
Sbjct: 19 LSPQEIASIRKACV-FGTSANEAIYITHSDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 75
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
L G K ++L + V T G+V +WG G +LG+G + + ++ T
Sbjct: 76 ALCG--KKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVC---TN 130
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
LIK KV A G HS + +G +Y +G ++ + P +S
Sbjct: 131 LLIK-----KVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQ 185
Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ VV CG + + + GE+Y WG N NG LG+G
Sbjct: 186 GKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLG 222
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG G LG G + P F+ +K + CGG HTL TE+G VY G
Sbjct: 899 WGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRI 958
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG+ + + L P+ I L+K V Q++ GY H+ + GE+ ++G GQLG G
Sbjct: 959 GQLGLGDRTLHWL-PVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGM 1017
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ K + +PTK++ + I QAA G+ + +T G+V + G+ SG+LGH
Sbjct: 1018 R--KDLLVPTKLQAMPSIV--QAACGYCHTALLTEAGEVYTCGSAMSGQLGHADN----- 1068
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---DRAVDKMLFQEGN 276
P++++ L G +++ A G H+ I + VY +G D + QE
Sbjct: 1069 --LQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERK 1126
Query: 277 HA--RR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
A +R PS++ L V CG H+ T GE+Y W S
Sbjct: 1127 AAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSST 1171
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 137/302 (45%), Gaps = 29/302 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG G+LGLG W PV K + LA G AHT+ + ++G V G + GQ
Sbjct: 953 WGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQ 1012
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P ++ + +VQ + GY H++ +T GE+Y G +GQLG
Sbjct: 1013 LGTGMRKDL-LVPTKLQAMPS-IVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQ 1070
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW----GAGGSGRLGHGQESSIL 218
P VE L+G + A G ++A+T V +W G G + ++++IL
Sbjct: 1071 NDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAIL 1130
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR-AVDKMLFQEGN- 276
TP ++K L G ++ + + G HS +G VY++ ++ L G+
Sbjct: 1131 ------KRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSG 1184
Query: 277 ------HARRPSLISKLP-----YSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG 321
P L+S +P S+ VV G T V+T G LY+WGS G LG
Sbjct: 1185 LSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLG 1244
Query: 322 IG 323
+G
Sbjct: 1245 LG 1246
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 117/255 (45%), Gaps = 41/255 (16%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVV-QISTGYH 133
++CG H LTE G VY G N G+LG + G L P ++ K + V ++ G
Sbjct: 880 VSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGE 939
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ A T G +Y WG GQLGLG + +P+P K L + Q A G+ ++ V
Sbjct: 940 HTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKT--LRKMHVTQLAAGYAHTIVVL 997
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V+ +G G G+LG G +L + + + P +++ AA G+ H+A +
Sbjct: 998 KSGEVMVFGGGEVGQLGTGMRKDLL--VPTKLQAMPSIVQ---------AACGYCHTALL 1046
Query: 254 DENGRVYIFG---------------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
E G VY G DR KM+ EG + +R I+ CG +
Sbjct: 1047 TEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMV--EGLNGKRIRFIA---------CGSF 1095
Query: 299 HTCVLTSGGELYTWG 313
HT +T +YTWG
Sbjct: 1096 HTIAITDLDNVYTWG 1110
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
++VV +S G++H +A+T +G +Y WG+N +G+LG G K+ P +V K+
Sbjct: 875 RQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEV 934
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G E ++A T G V WG G G+LG G T + P IK L + V
Sbjct: 935 VCGGEHTLARTESGSVYGWGNGRIGQLGLGDR---------TLHWLPVPIKTLRKMHVTQ 985
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVCGGY 298
AAG+ H+ + ++G V +FG V ++ G R+ P+ + +P + CG
Sbjct: 986 LAAGYAHTIVVLKSGEVMVFGGGEVGQL----GTGMRKDLLVPTKLQAMPSIVQAACGYC 1041
Query: 299 HTCVLTSGGELYTWGSNENGCLG 321
HT +LT GE+YT GS +G LG
Sbjct: 1042 HTALLTEAGEVYTCGSAMSGQLG 1064
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY----ATGLNDFGQLGISEN--IGY 111
R P + ++ +ACG HT+ +T+ VY G + G + I
Sbjct: 1072 DRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILK 1131
Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-----------GK 159
+ P + GL K + +S G+ HS A T+DGE+Y+W + Q L G
Sbjct: 1132 RVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGT 1191
Query: 160 KAAKVI--PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
A ++ IP + S K AA G E ++ VT G + SWG+G G+LG G +
Sbjct: 1192 TEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQ 1248
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY------SEE 292
+V + G+ H A + ENG VY +G ++ G+ + P L K +E
Sbjct: 876 QVVNVSCGWNHCAALTENGHVYTWGRNGSGEL--GHGDKSGVPQLHPKQVIFFKSKCVKE 933
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VVCGG HT T G +Y WG+ G LG+G
Sbjct: 934 VVCGGEHTLARTESGSVYGWGNGRIGQLGLG 964
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 38/296 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA----HTLFLTETGCVYATGLN 98
WG + G LGLG+ ++ P A + + ++ACGG H+ +TE G VY G
Sbjct: 3 WGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSG 62
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG ++ L L + +V+++ G H+ ++ G ++ WG GQLG+G
Sbjct: 63 KSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVG 122
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
P+ +V L G+ + A G + VT G V +WG G +G+LGHG ++
Sbjct: 123 STHNSNDPV--QVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDA--- 177
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE---- 274
S+ P +K+L G+ V A G H+ + E DRAV + E
Sbjct: 178 ------SQSRPMYVKKLHGIYVSTLACGLAHTVVVSEV-------DRAVFSWGWDEYGQL 224
Query: 275 ---------GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
GN R P I L +++ CG +T L+S G++Y +G ++G LG
Sbjct: 225 GHGGWDIFGGNKNRSPRPIKDL---QQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG----FEQSVAVTGGGKVLS 200
+ WG N++G LGLG A P P + L G+ A G + S AVT G+V +
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCP--IIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYT 58
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG+G SG+LGHG +++ PRLI L+ + A G H+ + + G V+
Sbjct: 59 WGSGKSGQLGHGDSQNLV---------LPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVF 109
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+G ++ +++ P ++ L + +V CG HT V+T G +YTWG NG
Sbjct: 110 AWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNG 169
Query: 319 CLGIG 323
LG G
Sbjct: 170 QLGHG 174
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 278 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 174
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 416
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG + +
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
+ P+ + + G V++A G H+ + E VY FG + LF+
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFLFE-- 282
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I + + + CG HT ++T G +YT+G +G LG+G
Sbjct: 283 --TSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLG 330
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 30/258 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + L FT KQ + G S
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEER------STFHLISFFTSQRKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G+ +G T+ P+ + G + + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQ---------IGLENVTNVCVPQQVT--VGKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
SA + G++Y FG+ K+ NH R P + +P +V CGG HT VLT
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Query: 306 GGELYTWGSNENGCLGIG 323
+YT+G + G LG+G
Sbjct: 261 KA-VYTFGLGQFGQLGLG 277
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KST--VSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P ++ + CG YH+ +T+ G+LYT+G E G LG+
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGL 224
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
+ACGG HT+ LTE VY GL FGQLG+ + + P I +K + + I+ G +H
Sbjct: 248 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENH 306
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
++ IT G +Y +G +G+LGLG + + IPT
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPT 341
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG S ++ P +CS F + ++ ++CGG HTL
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVF 364
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4043 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4102
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4103 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4160
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4161 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4217
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4218 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4270
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4271 RPRLVAALQGKKVNRVACGSAHT 4293
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 482 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 540
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 541 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 598
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 599 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 649
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 650 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 709
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 710 SWGSNDQ 716
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3049 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3108
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3109 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3166
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3167 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3223
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3224 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3272
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3273 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3304
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 468
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +++I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 469 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 524
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 525 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 572
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 573 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 632
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 633 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 670
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2995 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3054
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3055 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3113
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3114 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3167
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3168 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3222
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3223 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 3270
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 497 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 555
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 556 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 614
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 615 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 672
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 673 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 712
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4003 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4061
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4062 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4119
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4120 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4170
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4171 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4230
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4231 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4264
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3937 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3994
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3995 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4052
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4053 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4107
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4108 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4161
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4162 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4212
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2977 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3036
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3037 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3094
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3095 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3145
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3146 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3205
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3206 TWGKGDYFRLGHG 3218
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2931 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2988
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3042
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3043 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3102
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3103 LGEYGRLGHG 3112
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 553 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 612
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 613 GKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 671
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 672 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 714
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3932 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3990
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3991 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4050
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4051 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4101
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4102 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4160
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 607 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 666
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 667 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 718
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4201 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4260
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4261 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4295
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3930 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3989
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 3990 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4049
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4050 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4104
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 134/280 (47%), Gaps = 19/280 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +YG+ PV E ++ A+A G +L + G V+A G+N+ G
Sbjct: 115 IWGHTNYGQRKSDVYRDFTTPVKVK--ELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHG 172
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LGI + S P+++ GLK +VV +S G +HS A+ DG ++ WG N +G+LG
Sbjct: 173 ELGIGS-LKPSAVPVKVKGLK-DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTE 230
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P +V+ LS + A GF S+A+ G V WG G + G S
Sbjct: 231 DYTVSVPVRVKGLSDVIAISAG-GF-HSIALNKDGAVWIWGGGIIEKNGKIDNS------ 282
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
Y P I+ L KV AAG+ HS + ++G V+++G + + G H+
Sbjct: 283 -----YIPVRIRWLN--KVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLL 335
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L V G H+ LT G ++ WG+N G LG
Sbjct: 336 VQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLG 375
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 148/325 (45%), Gaps = 53/325 (16%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ YG LG E + V + ++ A+A G H++ LT+ G ++A G N FG
Sbjct: 315 VWGHNSYGVLGSNVGEHSFLLVQVKGLK--NVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372
Query: 102 QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG EN +SL P ++ L VV I+TG H+ AI DG ++ WG N+ GQLG G
Sbjct: 373 QLG-RENNSFSLNLPYKVKWLD-NVVAIATGGSHTLAIKRDGTVWSWGANNKGQLGNG-- 428
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG------------------ 202
K IPT V+ L+ +A G + S+AV G V WG
Sbjct: 429 TYKSSYIPTCVKGLNNAVLVEA--GSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPL 486
Query: 203 -------------AGGSGRL----------GHGQESSILGFLRSTSEYTPRLIKELEGVK 239
AGG + G G + F S+ +LI+ L+ +K
Sbjct: 487 PIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIR-LDNIK 545
Query: 240 -VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
V+ AAG+ HS + +G V+ +GD +D + N + +P I L +V G Y
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKK-KYLNFSEKPVKIKGLSGVVKVAAGKY 604
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
H+ L G +++WG N G LG G
Sbjct: 605 HSLALKKDGTVWSWGYNAYGQLGNG 629
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 139/282 (49%), Gaps = 25/282 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ + PV + + A++ G H+L L + G V+ G ++GQ
Sbjct: 66 WGYNGFGQLGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQ 123
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
++ P+++ L K +V I+ G+ S A+ DG ++ WG N++G+LG+G +
Sbjct: 124 RKSDVYRDFT-TPVKVKEL-KNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIG--SL 179
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K +P KV+ L + A G S+A+ G V SWG G LG+ R
Sbjct: 180 KPSAVPVKVKGLKDVVAVSA--GLYHSLALKRDGTVWSWGYNEDGELGN----------R 227
Query: 223 STSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T +YT P +K L V + I+A GF HS ++++G V+I+G ++K + +++
Sbjct: 228 PTEDYTVSVPVRVKGLSDV-IAISAGGF-HSIALNKDGAVWIWGGGIIEKN--GKIDNSY 283
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P I L + G H+ L G ++ WG N G LG
Sbjct: 284 IPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLG 325
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 135/323 (41%), Gaps = 72/323 (22%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G LG+GSL+ PV + + A++ G H+L L G V++ G N+ G+
Sbjct: 166 WGINNHGELGIGSLKPSAVPVKVKGLK--DVVAVSAGLYHSLALKRDGTVWSWGYNEDGE 223
Query: 103 LGISENIGYSLE-PLRISGLK--------------------------------------- 122
LG Y++ P+R+ GL
Sbjct: 224 LGNRPTEDYTVSVPVRVKGLSDVIAISAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSY 283
Query: 123 --------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--LGKKAAKVIPIPTKVE 172
+VV I+ GY HS A+ DG +++WG NS G LG +G+ + ++ +V+
Sbjct: 284 IPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLLV----QVK 339
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + A G SVA+T G + +WG G+LG S L P +
Sbjct: 340 GLKNVVA--VAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNL--------PYKV 389
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS 290
K L+ V V IA G H+ I +G V+ +G A +K G + P+ + L +
Sbjct: 390 KWLDNV-VAIATGGS-HTLAIKRDGTVWSWG--ANNKGQLGNGTYKSSYIPTCVKGLNNA 445
Query: 291 EEVVCGGYHTCVLTSGGELYTWG 313
V G H+ + G ++ WG
Sbjct: 446 VLVEAGSQHSLAVDKDGTVWVWG 468
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 25/207 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
+++++A G H+L + G V++ G D + + +S +P++I GL VV+++ G
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWG--DTNLDNKKKYLNFSEKPVKIKGLSG-VVKVAAG 602
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+HS A+ DG ++ WG N+ GQLG G + +P+ +V+ L+ + A G S+A
Sbjct: 603 KYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPV--RVKGLNNVVA--IAAGDYHSMA 658
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLH 249
+ G V WG+ G+LG R E++ P +++L+ V V I AAG H
Sbjct: 659 LKKDGTVWVWGSNIRGQLG-----------RRNIEFSTVPLKVEKLDNV-VAI-AAGDTH 705
Query: 250 SACIDENGRVYIFG---DRAVDKMLFQ 273
S + ++G V+++G DR + K +
Sbjct: 706 SVALKKDGTVWVWGIECDRDLSKEILS 732
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 134/338 (39%), Gaps = 85/338 (25%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +G+LG + S P + ++ A+A GG+HTL + G V++ G N+ G
Sbjct: 366 WGNNAFGQLGRENNSFSLNLPYKVKWLD--NVVAIATGGSHTLAIKRDGTVWSWGANNKG 423
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--------KNSNG 153
QLG + S P + GL V+ + G HS A+ DG +++WG KN+
Sbjct: 424 QLG-NGTYKSSYIPTCVKGLNNAVL-VEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKD 481
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L P+P K+ L+ I + A G + + + G + WG G
Sbjct: 482 ILS---------PLPIKIGKLNDI--TEIAGGLDYILVLRKDGNI--WGCG--------N 520
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDK--- 269
+ F S+ +LI+ L+ +K V+ AAG+ HS + +G V+ +GD +D
Sbjct: 521 DFYFRKFTDSSVSSVTKLIR-LDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKKK 579
Query: 270 -MLFQE-----------------------------------------GNHARR----PSL 283
+ F E GN R P
Sbjct: 580 YLNFSEKPVKIKGLSGVVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVR 639
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L + G YH+ L G ++ WGSN G LG
Sbjct: 640 VKGLNNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLG 677
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ E+ + PV +++ A+A G H++ L + G V+ G N GQ
Sbjct: 618 WGYNAYGQLGNGTRETSFVPVRVKGL--NNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQ 675
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG NI +S PL++ L VV I+ G HS A+ DG +++WG + L ++
Sbjct: 676 LG-RRNIEFSTVPLKVEKLD-NVVAIAAGDTHSVALKKDGTVWVWGIECDRDLSKEILSS 733
Query: 163 KVIPIPTK 170
IP+ K
Sbjct: 734 SSIPVQIK 741
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ G +V+ G H+ AI DG ++ WG N GQLG G IP+ +V+ L
Sbjct: 36 ELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPV--RVKGLKD 93
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ A G S+A+ G V W G +GQ S R + TP +KEL+
Sbjct: 94 VVAVSA--GTFHSLALKKDGSVWIW-----GHTNYGQRKS--DVYRDFT--TPVKVKELK 142
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
+ V I AAG+ S + +G V+ +G ++ + P + L V G
Sbjct: 143 NI-VAI-AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAG 200
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
YH+ L G +++WG NE+G LG
Sbjct: 201 LYHSLALKRDGTVWSWGYNEDGELG 225
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
++A+ G V +WG G G+LG+G ++S I P +K L+ V +A
Sbjct: 53 HTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCI-----------PVRVKGLKDVVA--VSA 99
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
G HS + ++G V+I+G + P + +L + G + + S
Sbjct: 100 GTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKVKELKNIVAIAAGWDFSLAVGS 159
Query: 306 GGELYTWGSNENGCLGIG 323
G ++ WG N +G LGIG
Sbjct: 160 DGSVWAWGINNHGELGIG 177
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3293
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3229 TWGKGDYFRLGHG 3241
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3126 LGEYGRLGHG 3135
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P PT L G+ TK A G QS A
Sbjct: 747 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 776
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4282
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4283 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4072 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHT 4316
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +++I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 3293
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 4084
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4287
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4235
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3229 TWGKGDYFRLGHG 3241
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3126 LGEYGRLGHG 3135
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4183
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4284 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4073 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 445
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 140/289 (48%), Gaps = 19/289 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182
Query: 102 QLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L P + G ++ I+T H++AIT GELYMWG+
Sbjct: 183 ALG-HKVYTRELVPRCVDGSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241
Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGDN- 299
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
LG + P + L+ V++ A G HS + + G+V +G ++
Sbjct: 300 --LG------GWEPLPVPSLDSVRITQIACGGYHSLALTKEGKVLSWGHGGHGQLGNSSL 351
Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ + P+ I L + V CGG + +T GGEL+ WG+ ++ LG+
Sbjct: 352 RNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQLGV 400
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
+ IS G HS +T+DG+L++WGK G+LG G++ + +P L+ +F + +
Sbjct: 104 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 156
Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
ALG SVA+T G V +WG GG G LGH T E PR + K+
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGHKV---------YTRELVPRCVDGSWDCKIS 207
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVD-------KMLFQEGNHARRPSLISKLPYS-EEV 293
A H+A I E+G +Y++G D EG PS + L V
Sbjct: 208 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 267
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CGG+ T LT G+L+ WG+N N LG G
Sbjct: 268 SCGGFFTMALTKEGQLWNWGANSNYELGRG 297
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G +G+LG SL ++ P A + +ACGG+ + +T+ G ++ G Q
Sbjct: 338 WGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQ 397
Query: 103 LGISENIGYSLEPLRISGLKKE-------VVQISTGYHHS 135
LG+ P+ ++ L +E V+ +S G H+
Sbjct: 398 LGVPGLPEIQTTPVEVNFLTEEDERQPHKVISVSIGASHA 437
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 131/260 (50%), Gaps = 29/260 (11%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVV 126
+K + ++ G H L L+ G + YS+E R + +K ++
Sbjct: 5 KKMKIHSVDQGAEHMLILSSDGKPF--------------EYNYSIEHARFQCILQEKSII 50
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QI+ G +HS A++ GEL+ WG+N +GQLG+G+ A IP P VE LSG+ Q + G
Sbjct: 51 QITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFAS-IPTPQLVEHLSGVPLVQISAGK 109
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A++ G + SWG G+LG G + E P L++ L+ KV+ A G
Sbjct: 110 AHSMALSMSGNIYSWGRNDLGQLGLGH---------TDGEEFPSLVEALDSQKVEFLACG 160
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLT 304
H+A + E+G+V+ FG ++ + RP L+++L +V CG HT
Sbjct: 161 GSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYV 220
Query: 305 SG-GELYTWGSNENGCLGIG 323
S G+++++GS + G LG G
Sbjct: 221 SDLGKVFSFGSGKEGQLGNG 240
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 116/228 (50%), Gaps = 14/228 (6%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVV 126
++ S+ + CG H+L L++ G ++A G N GQLGI P + L +V
Sbjct: 44 LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLV 103
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QIS G HS A+++ G +Y WG+N GQLGLG + P+ VE L + A G
Sbjct: 104 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGE--EFPSLVEALDSQKVEFLACGG 161
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ +T G+V ++GAG G+LGH + +E PRL+ EL G++V A G
Sbjct: 162 SHTALLTEDGQVFTFGAGKHGQLGHNS---------TQNELRPRLVTELTGIRVTQVACG 212
Query: 247 FLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
H+ A + + G+V+ FG + L G H + L KLP +E++
Sbjct: 213 RRHTLAYVSDLGKVFSFGS-GKEGQLGNGGTHNQLIPLPMKLPSNEDL 259
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G L S P + L ++ G AH++ L+ +G +Y+ G ND G
Sbjct: 71 WGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLG 130
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ G P + L + V+ ++ G H++ +T DG+++ +G +GQLG
Sbjct: 131 QLGLGHTDGEEF-PSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNST 189
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L+GI Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 190 QNEL--RPRLVTELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNG 240
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG + P + A + ++ LACGG+HT LTE G V+ G GQ
Sbjct: 124 WGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQ 183
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V Q++ G H+ A D G+++ +G GQLG G
Sbjct: 184 LG-HNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGT 242
Query: 161 AAKVIPIPTKV 171
++IP+P K+
Sbjct: 243 HNQLIPLPMKL 253
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 81 GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 140 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---------SG 248
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 263
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 278 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 174
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
Length = 531
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 127/270 (47%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLDALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ V++I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K++
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLD 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + L ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHT 4316
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 133/289 (46%), Gaps = 22/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3135
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3190
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3191 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 3293
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 4084
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4287
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4235
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3229 TWGKGDYFRLGHG 3241
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G L S + PR I L VK A +G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL 3063
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3124 WGLGEYGRLGHG 3135
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4183
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4284 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4073 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG G +++ P + + L+ G G H + T G VY G N + QLG +
Sbjct: 246 GCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLG-NG 304
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +S + K+VV+++ G HHS +T DGE+Y WG N++GQ+G G A +
Sbjct: 305 TTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQ-- 362
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 363 PIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGS---------SG 413
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP I L+G++V+ G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 414 NQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQL--GTGNKSNQSYPI 471
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T G +Y WG
Sbjct: 472 PVPVEKDRIIEIAACHSAHTSAAKTQSGHVYMWG 505
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 126/276 (45%), Gaps = 24/276 (8%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ TE V+ G N G LG + + ++E
Sbjct: 200 KWPIFALCSPEELKLIRQACVFGSAGNEVLYATENDEVFVLGTNCSGCLGTGD-VQNTIE 258
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P RI L K++ +S G H T +GE+Y WG N+ QLG G +IP
Sbjct: 259 PRRIDSLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPCHVSTN 318
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
++ + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 319 LVNKKVV-EVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGS---------TANQPIPRRV 368
Query: 233 KELEGVKVKIA---AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP- 288
++ KIA A G + S + E+G VY++G ++ + P I+ L
Sbjct: 369 TSC--LQNKIATNIACGQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 426
Query: 289 -YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G+LY WG+N G LG G
Sbjct: 427 IRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTG 462
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ + CG AHTL LT+ G +YA G N +G
Sbjct: 398 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYG 457
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P+ + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 458 QLGTGNKSNQSY-PIPVPVEKDRIIEIAACHSAHTSAAKTQSGHVYMWGQ-CRGQ----- 510
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 511 --SVTLPHLTHFSCTDDVF 527
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4066 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4125
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4126 LGHSDSED-QLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4183
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4184 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4240
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4241 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHT 4316
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 3293
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 4084
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4143 LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4287
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 135/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G V A +G + C+ ++ V+ +GD K+
Sbjct: 4131 ------SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4235
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3229 TWGKGDYFRLGHG 3241
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3126 LGEYGRLGHG 3135
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E PV+ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 95/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L + +V CG T LT +++WG + G LG G
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4183
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4224 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4283
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4284 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4072
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4073 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4127
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3975 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4034
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4035 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4092
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4093 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4149
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4150 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4202
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4203 RPRLVAALQGKKVNRVACGSAHT 4225
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 415 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 473
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 474 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 531
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 532 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 582
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H VLT E++
Sbjct: 583 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVH 642
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 643 SWGSNDQ 649
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +A G +H+ LT +G +Y GL ++G+
Sbjct: 2982 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3041
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3042 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3099
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3100 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3156
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3157 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3205
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3206 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3237
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 353 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 401
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 402 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 457
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 458 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 505
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 565
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 566 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 603
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3935 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3993
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3994 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4051
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4052 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4102
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4103 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4162
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4163 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4196
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 430 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 488
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 489 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 547
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 548 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 605
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 606 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 645
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 131/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2928 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2987
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+ +T GELY WG G+LG G
Sbjct: 2988 GKLGHFSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGD 3046
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3047 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3100
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3101 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3155
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3156 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3203
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3869 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3926
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3927 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3984
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3985 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4039
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4040 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4093
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4094 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4144
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2910 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 2969
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P ++ L + A G S +T
Sbjct: 2970 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3027
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3028 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3078
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3079 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3138
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3139 TWGKGDYFRLGHG 3151
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 486 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 545
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 546 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 604
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G + +T +V SWG+
Sbjct: 605 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 647
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2864 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2921
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2922 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 2975
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ G H+ LTS GELYTWG
Sbjct: 2976 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWG 3035
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3036 LGEYGRLGHG 3045
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3864 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3922
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3923 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3982
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3983 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4033
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4034 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4092
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 540 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 599
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + GL+ K+V+ ++ G H +T D E++ WG N Q L
Sbjct: 600 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTL 656
Query: 156 GLGKKAAKVIP 166
G+ K P
Sbjct: 657 GVTKPEPTAFP 667
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4133 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4192
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4193 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4227
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3862 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3921
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 3922 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3981
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 3982 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4036
>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Papio anubis]
Length = 355
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
garnettii]
Length = 816
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 150/293 (51%), Gaps = 31/293 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HT+ TE G VYATG N+ G
Sbjct: 58 MFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGNNEG 117
Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ E + L S K + Q+S G + S+A+T DG+L+MWG NS GQ+GL
Sbjct: 118 QLGLGDTDERDTFHLISFFTSQHK--IKQLSAGSNTSAALTEDGQLFMWGDNSEGQIGL- 174
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K + +P +V G + G+ S VT G++ ++G SG+L G S +L
Sbjct: 175 -KDVTNVCVPHQVTI--GKPISWISCGYYHSAFVTIDGELYTFGESESGKL--GLPSQLL 229
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQ 273
T+ P+L+ + +++A G H+ + E VY FG + +F+
Sbjct: 230 -----TNHRIPQLVSSIPDKVIQVACGGG-HTLVLTEES-VYAFGLGQFGQLGLGTFIFE 282
Query: 274 EGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ + E+++ CG HT ++T G +YT+G +G LG+G
Sbjct: 283 ----TSEPKVLEYV-KGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLG 330
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 122/243 (50%), Gaps = 30/243 (12%)
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
+ ++G V+ FG+ +ENI P + + +S G HS+ +T + +L
Sbjct: 7 LVPDSGAVFT-----FGKTKFAENI-----PSKFWFKSDTPICLSCGDEHSAIVTGNNKL 56
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
YM+G N+ GQLGLG KAA + PT ++ L K AA G ++ T GG V + G
Sbjct: 57 YMFGSNNWGQLGLGSKAA--VNKPTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGN 114
Query: 205 GSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
G+LG G ++ F TS++ K+K +AG SA + E+G++
Sbjct: 115 NEGQLGLGDTDERDTFHLISFF--TSQH-----------KIKQLSAGSNTSAALTEDGQL 161
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+++GD + ++ ++ + P ++ + CG YH+ +T GELYT+G +E+G
Sbjct: 162 FMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWISCGYYHSAFVTIDGELYTFGESESGK 221
Query: 320 LGI 322
LG+
Sbjct: 222 LGL 224
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 121/266 (45%), Gaps = 30/266 (11%)
Query: 68 FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
F+ + L+CG H+ +T +Y G N++GQLG+ + +P I LK E V+
Sbjct: 32 FKSDTPICLSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVN-KPTCIKALKPEKVK 90
Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
+ G H+ T G +Y G N+ GQLGLG + L FT KQ
Sbjct: 91 FAACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDER------DTFHLISFFTSQHKIKQ 144
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G S A+T G++ WG G++G +++ P + G +
Sbjct: 145 LSAGSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNVC---------VPHQV--TIGKPIS 193
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGG 297
+ G+ HSA + +G +Y FG+ K+ NH R P L+S +P +V CGG
Sbjct: 194 WISCGYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNH-RIPQLVSSIPDKVIQVACGG 252
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
HT VLT +Y +G + G LG+G
Sbjct: 253 GHTLVLTEES-VYAFGLGQFGQLGLG 277
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 14/71 (19%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +R+ P CS F K ++ +ACGG H L V+AT
Sbjct: 319 FGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCHML-------VFAT----- 366
Query: 101 GQLGISENIGY 111
Q G++E + +
Sbjct: 367 PQAGMAEELEF 377
>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
Length = 1083
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 137/299 (45%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + P + + S+ +ACG HT +T TG +Y G ++
Sbjct: 301 WGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNA 360
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + ++ +S G H++ IT G+L+ +G + G LG G
Sbjct: 361 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 419
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
K + + P +VE LSG+ T A G QS + GK+ +WG G
Sbjct: 420 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKS 477
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + S L P + L A G + + +G+VY G V
Sbjct: 478 RLGHGDKESRL---------KPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGS-TV 527
Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + P L+ KL EE+ CG YH VLTS E++TWG NG LG G
Sbjct: 528 YGQLGNPNADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHG 586
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G ESR +P SA H+ +ACG + T+ LT +G VY G +GQ
Sbjct: 471 WGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQ 530
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + N L L L K+ V +I+ G +H + +T E++ WGK +NG+LG G
Sbjct: 531 LG-NPNADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDIE 589
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ P+ V+ L K A G + A+
Sbjct: 590 DR--KAPSLVDTLKERHVKNIACGSNFTAAI 618
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 35/266 (13%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQ-ISTGYH 133
+ACG H ++ G V+ G G+LG +G + P I L V ++ G
Sbjct: 282 IACGVRHAALVSRQGEVFTWGEASGGRLG--HGMGKDVTGPQLIESLAATSVDFVACGEF 339
Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
H+ A+T+ GE+Y WG ++ G LG G + IP ++ L G+ + G +
Sbjct: 340 HTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHW--IPKRISGPLEGLQIASVSCGPWHTA 397
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T G++ ++G G G LGHG + ++ + PR ++ L G++ A G H+
Sbjct: 398 LITSTGQLFTFGDGTFGVLGHGDKETV---------FYPREVESLSGLRTIAVACGVWHA 448
Query: 251 ACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS--EEVVC 295
A I E +G+++ +GD DK G+ R P+ +S L V C
Sbjct: 449 AAIVEVIVTQSTSSISSGKLFTWGDG--DKSRLGHGDKESRLKPTCVSALIDHTFHRVAC 506
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLG 321
G T LT+ G++YT GS G LG
Sbjct: 507 GHSLTVGLTTSGKVYTMGSTVYGQLG 532
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 24/196 (12%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ + G K A V + IP +E + A G + V+
Sbjct: 234 GDVYIWGEVLCDNVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVRHAALVS 293
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG GRLGHG + G P+LI+ L V A G H+ +
Sbjct: 294 RQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLAATSVDFVACGEFHTCAV 344
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD + L G P IS P V CG +HT ++TS G
Sbjct: 345 TMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITSTG 403
Query: 308 ELYTWGSNENGCLGIG 323
+L+T+G G LG G
Sbjct: 404 QLFTFGDGTFGVLGHG 419
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 28/226 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S + +V I+ G H++ ++ GE++ WG+ S G+LG G K + P +E
Sbjct: 269 KPLE-SNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHG--MGKDVTGPQLIES 325
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G +G LGHG + S + P+
Sbjct: 326 LAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTD---------VSHWIPKR 376
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
I LEG+++ + G H+A I G+++ FGD + + P + L
Sbjct: 377 ISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGL 436
Query: 289 YSEEVVCGGYHTCVLT-----------SGGELYTWGSNENGCLGIG 323
+ V CG +H + S G+L+TWG + LG G
Sbjct: 437 RTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHG 482
>gi|115373014|ref|ZP_01460317.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310821893|ref|YP_003954251.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|115369926|gb|EAU68858.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309394965|gb|ADO72424.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 864
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 163/329 (49%), Gaps = 38/329 (11%)
Query: 6 LTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVC 65
++A++ +Q + GS + R + L WG + G+LG GS ++R PV
Sbjct: 56 ISALSLSNTQQGVSAGSYHSLLLRSTGAVL------AWGQNNSGQLGDGSTQNRTLPV-- 107
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---------SENIGYSLEPL 116
+ S+KA++ GG+++L + G V+A G N+ GQLG SE + + P+
Sbjct: 108 NVLGLPSIKAISAGGSYSLAVGADGKVWAWGANNSGQLGTGYLGNGKSGSEYADFQVTPV 167
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
I + +S G +HS A+ DG+L+ WG N+ GQLG G A ++ P+ + G
Sbjct: 168 SIV-IPGGAAAVSGGLNHSLALAKDGKLWAWGANTYGQLGDGTTANRLAPVSVNIP--GG 224
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G+ S+A+ G+V +WG SG++G+G ++ L TP ++
Sbjct: 225 AIA--IAAGWYHSLAIARDGRVWAWGRNNSGQVGNGGTANQL---------TPVVVA-FP 272
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV 294
G + +A G HS + NG V+ +G A + +G++A R P + + + +V
Sbjct: 273 GSAIAVAGGGS-HSLVVLSNGTVWSWG--ANNAGQLGDGSNATRVSPIQVPGIGVATKVA 329
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
GGY + +TS G +++WG N G LG G
Sbjct: 330 AGGYFSLAITSDG-VWSWGQNTRGQLGNG 357
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 136/289 (47%), Gaps = 26/289 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--------HTLFLTETGCVYA 94
WG + G+LG G L + + F+ + + GGA H+L L + G ++A
Sbjct: 137 WGANNSGQLGTGYLGNGKSGSEYADFQVTPVSIVIPGGAAAVSGGLNHSLALAKDGKLWA 196
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N +GQLG L P+ ++ + + I+ G++HS AI DG ++ WG+N++GQ
Sbjct: 197 WGANTYGQLG-DGTTANRLAPVSVN-IPGGAIAIAAGWYHSLAIARDGRVWAWGRNNSGQ 254
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G G A ++ P+ V G A G S+ V G V SWGA +G+LG G
Sbjct: 255 VGNGGTANQLTPV---VVAFPGSAIAVAG-GGSHSLVVLSNGTVWSWGANNAGQLGDGSN 310
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
++ R + P + GV K+AA G+ A I +G V+ +G ++
Sbjct: 311 AT-----RVSPIQVPGI-----GVATKVAAGGYFSLA-ITSDG-VWSWGQNTRGQLGNGS 358
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ P I+ + + G +H+ +L G ++ WG N G LG G
Sbjct: 359 LANSSVPVFITATSNALALSGGYHHSLILRPGCPIWAWGFNAYGQLGDG 407
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 117 RISGLKKEVVQ--ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
IS L Q +S G +HS + G + WG+N++GQLG G + +P+ V L
Sbjct: 55 EISALSLSNTQQGVSAGSYHSLLLRSTGAVLAWGQNNSGQLGDGSTQNRTLPV--NVLGL 112
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
I K + G S+AV GKV +WGA SG+LG G LG +S SEY +
Sbjct: 113 PSI--KAISAGGSYSLAVGADGKVWAWGANNSGQLGTG----YLGNGKSGSEYADFQVTP 166
Query: 235 LEGVKVKIAAA---GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPYS 290
+ V AAA G HS + ++G+++ +G ++ +G A R + +S +P
Sbjct: 167 VSIVIPGGAAAVSGGLNHSLALAKDGKLWAWGANTYGQL--GDGTTANRLAPVSVNIPGG 224
Query: 291 EEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
+ G YH+ + G ++ WG N +G +G G
Sbjct: 225 AIAIAAGWYHSLAIARDGRVWAWGRNNSGQVGNG 258
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS +R P+ + +A GG +L +T G V++ G N GQ
Sbjct: 297 WGANNAGQLGDGSNATRVSPIQVPGIGVAT--KVAAGGYFSLAITSDG-VWSWGQNTRGQ 353
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + ++ S P+ I+ + +S GYHHS + ++ WG N+ GQLG G
Sbjct: 354 LG-NGSLANSSVPVFITATSN-ALALSGGYHHSLILRPGCPIWAWGFNAYGQLGDGTLVD 411
Query: 163 KVIPIPTKV 171
++ P+ ++
Sbjct: 412 RLAPVQAEI 420
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4073 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4132
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 4133 LGHSDSED-QLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4190
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4191 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4247
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4248 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4300
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4301 RPRLVAALQGKKVNRVACGSAHT 4323
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3079 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3138
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3139 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3196
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3197 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3253
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3254 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3302
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3303 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3334
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3025 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3084
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3085 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3143
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3144 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3197
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3198 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3252
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3253 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 3300
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4033 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 4091
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4092 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4149
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4150 LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4200
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4201 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4260
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4261 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4294
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 135/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3967 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4024
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4025 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4082
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4083 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4137
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G V A +G + C+ ++ V+ +GD K+
Sbjct: 4138 ------SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4191
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4192 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4242
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3007 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3066
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3067 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3124
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3125 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3175
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3176 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3235
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3236 TWGKGDYFRLGHG 3248
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2961 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3018
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3072
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3073 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3132
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3133 LGEYGRLGHG 3142
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E PV+ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 95/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3962 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4020
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4021 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4080
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4081 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4131
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L + +V CG T LT +++WG + G LG G
Sbjct: 4132 RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4190
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4231 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4290
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4291 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4325
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3960 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4019
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4020 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4079
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4080 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4134
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 13/207 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G DYG+LGLG+L+ + P + A + ++ CG H++ + G +++ G ND GQL
Sbjct: 144 GRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQL 203
Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
GI+ + G P + LK QI+ GY+H+ AI +G+LY WGKN +GQLG+G +AK
Sbjct: 204 GITGSDGNISLPKEVKNLKS--TQIACGYYHTVAIN-NGQLYSWGKNDSGQLGIGIYSAK 260
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
I +PT V L A G ++A+ G++ S+G G+LG G +
Sbjct: 261 EI-LPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDG---------TT 310
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHS 250
+ P LI+ L KV AAGF HS
Sbjct: 311 NNSCKPLLIQGLIDKKVCQIAAGFYHS 337
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 18/261 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFGQLGISE 107
G+LG G S P A + + A+ C HT+F + +Y+ G ND+GQLG+
Sbjct: 96 GQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLG- 154
Query: 108 NIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
N+ P I L K +V I G +HS ++DGE++ +G+N +GQLG+ I
Sbjct: 155 NLDDKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGN-IS 213
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +V+ L + Q A G+ +VA+ G++ SWG SG+LG G + S E
Sbjct: 214 LPKEVKNLK---STQIACGYYHTVAIN-NGQLYSWGKNDSGQLGIG--------IYSAKE 261
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
P L+++LE ++ A G H+ + G+++ FG + ++ N++ +P LI
Sbjct: 262 ILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQG 321
Query: 287 LPYSE--EVVCGGYHTCVLTS 305
L + ++ G YH+ VL +
Sbjct: 322 LIDKKVCQIAAGFYHSIVLAN 342
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 126/262 (48%), Gaps = 25/262 (9%)
Query: 70 KHSLKALACGGA-HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQ 127
K+ +K A G H + LT G V++ G N GQLG + + P ++ L +K V
Sbjct: 64 KNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSIN-SPKQVEALSRKFVTA 122
Query: 128 ISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ Y+H+ D E+Y G+N GQLGLG K PT +E L+G G
Sbjct: 123 VGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDK--NSPTLIEALNGKRIVSIGCGQ 180
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
SV + G++ S+G SG+LG I G S+ L KE++ +K A G
Sbjct: 181 YHSVVSSIDGEIFSFGRNDSGQLG------ITG-----SDGNISLPKEVKNLKSTQIACG 229
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---PSLISKLPYSE--EVVCGGYHTC 301
+ H+ I+ NG++Y +G D G ++ + P+L+ L E V CG YHT
Sbjct: 230 YYHTVAIN-NGQLYSWGKN--DSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTL 286
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
L G+L+++G N +G LG G
Sbjct: 287 ALGYAGQLFSFGRNSHGQLGDG 308
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 124/264 (46%), Gaps = 30/264 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQ-LGISENI---GYSLEPLRISGLK-------KE 124
+A G HTL LT+ G VY+ G N+ G L N + R LK K
Sbjct: 6 VAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLRGKN 65
Query: 125 VVQI--STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+V+I S G H A+T +G+++ +G N GQLG G + + I P +VE LS F
Sbjct: 66 IVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTS--INSPKQVEALSRKFVTAV 123
Query: 183 ALGFEQSV-AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ ++ + ++ S G G+LG LG L + +P LI+ L G ++
Sbjct: 124 GCSYYHTIFSCADEMEIYSCGRNDYGQLG-------LGNLDDKN--SPTLIEALNGKRIV 174
Query: 242 IAAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
G HS +G ++ FG D + +GN P + L S ++ CG YH
Sbjct: 175 SIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGN-ISLPKEVKNLK-STQIACGYYH 232
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T V + G+LY+WG N++G LGIG
Sbjct: 233 T-VAINNGQLYSWGKNDSGQLGIG 255
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQ-LGLGKKAAKVIPIPTK--------VECLS 175
V+Q++ G H+ +T G++Y G N G L G A VE L
Sbjct: 3 VIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKLR 62
Query: 176 G--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
G I A+ G E +A+T GKV S+G G+LGHG ++SI +P+ ++
Sbjct: 63 GKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSI---------NSPKQVE 113
Query: 234 ELEGVKVKIAAAGFLHS--ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
L V + H+ +C DE +Y G ++ + P+LI L
Sbjct: 114 ALSRKFVTAVGCSYYHTIFSCADE-MEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKR 172
Query: 292 EVV--CGGYHTCVLTSGGELYTWGSNENGCLGI 322
V CG YH+ V + GE++++G N++G LGI
Sbjct: 173 IVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGI 205
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG D G+LG+G ++ P + E + ++ACG HTL L G +++ G N G
Sbjct: 244 WGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHG 303
Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHS 135
QLG S +PL I GL K+V QI+ G++HS
Sbjct: 304 QLG-DGTTNNSCKPLLIQGLIDKKVCQIAAGFYHS 337
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4131 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4190
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4191 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4248
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4249 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4305
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4306 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4358
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4359 RPRLVAALQGKKVNRVACGSAHT 4381
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3138 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3197
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3198 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3255
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3256 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3312
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3313 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3361
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3362 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3393
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 573 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 631
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 632 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 689
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 690 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 740
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 741 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 800
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 801 SWGSNDQ 807
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3084 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3143
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3144 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3202
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3203 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3256
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3257 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3311
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3312 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3359
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 559
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 560 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 615
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 616 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 663
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 664 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 723
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 724 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 761
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4091 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4149
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4150 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4207
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4208 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4258
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4259 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4318
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4319 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4352
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 588 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 646
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 647 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 705
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 706 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 763
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 764 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 803
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 4025 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4082
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4083 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4140
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4141 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4195
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4196 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4249
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4300
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3066 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3125
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3126 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3183
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3184 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3234
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3235 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3294
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3295 TWGKGDYFRLGHG 3307
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 3020 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3077
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3078 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3131
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3132 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3191
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3192 LGEYGRLGHG 3201
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 644 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 703
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 704 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 762
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 763 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 805
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 4020 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4078
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4079 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4138
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4139 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4189
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4190 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4248
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 698 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 757
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 758 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 814
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 815 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 844
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4289 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4348
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4349 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4383
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 4018 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4077
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4078 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4137
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4138 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4192
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3293
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3229 TWGKGDYFRLGHG 3241
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3126 LGEYGRLGHG 3135
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4282
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4283 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4072 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
Length = 531
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 127/270 (47%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKKLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCADDVF 357
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4070 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4129
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4130 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4187
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4188 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4244
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4245 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4297
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4298 RPRLVAALQGKKVNRVACGSAHT 4320
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3077 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3136
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3137 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3194
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3195 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3251
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3252 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3300
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3301 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3332
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 510 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 568
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 569 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 626
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 627 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 677
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 678 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 737
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 738 SWGSNDQ 744
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3023 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3082
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3083 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3141
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3142 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3195
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3196 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3250
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3251 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3298
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 496
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 497 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 552
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 553 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 600
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 601 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 660
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 661 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 698
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4030 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4088
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4089 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4146
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4147 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4197
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4198 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4257
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4258 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4291
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 525 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 583
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 584 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 642
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 643 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 700
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 701 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 740
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3964 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4021
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4022 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4079
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4080 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4134
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4135 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4188
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4189 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4239
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3005 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3064
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3065 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3122
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3123 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3173
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3174 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3233
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3234 TWGKGDYFRLGHG 3246
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2959 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3016
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3017 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3070
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3071 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3130
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3131 LGEYGRLGHG 3140
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 581 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 640
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 641 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 699
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 700 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 742
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3959 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4017
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4018 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4077
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4078 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4128
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4129 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4187
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 635 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 694
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 695 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 751
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 752 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 781
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4228 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4287
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4288 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4322
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3957 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4016
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4017 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4076
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4077 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4131
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 132/285 (46%), Gaps = 15/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG S+ + PV+ S + + ++ G H+L + G YA G N G+
Sbjct: 73 WGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGR 132
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS---TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG + G S+ L +G V IS G HS A+ +G++Y WG N +GQLG G
Sbjct: 133 LGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGT 192
Query: 160 KAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A +P+ + +G+ Q + G S+A+ GK +WG G+LG G S
Sbjct: 193 TLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSIS--- 249
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
R+ + P L+ GV +AG LHS + +G+ Y +G+ ++ +
Sbjct: 250 ---RTPA---PALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSS 303
Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P L+S + +V G H+ + + G Y WG N NG LG
Sbjct: 304 LAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLG 348
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 135/294 (45%), Gaps = 29/294 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALACGGAHTLFLTETGCVYATGLND 99
WG GRLG G+ P++ SA S + + GG H+L + G +Y+ G N
Sbjct: 125 WGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNR 184
Query: 100 FGQLGISENIGYSLEPLRISG--LKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG + S+ PL++S + V Q+S G HS AI +G+ Y WG+ GQL
Sbjct: 185 SGQLGDGTTLASSV-PLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQL 243
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+G + P P V +G+ Q + G S+AV GK +WG SG+LG+
Sbjct: 244 GIGSISRT--PAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNAT-- 299
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+TS P L+ + G+ V +AG HS I +G Y +G ++ G
Sbjct: 300 -------TTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQL----G 348
Query: 276 NHARRPSLISKLPYSEEVV------CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N+ S + + + + V GG H+ S YTWG+N G LG G
Sbjct: 349 NNTITTSTVPVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGNG 402
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 118/250 (47%), Gaps = 11/250 (4%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G H+L + G +YA G N GQLG + + S+ L + Q+S G HS
Sbjct: 54 VSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHS 113
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTG 194
A+ DG Y WG+N++G+LG G +P+ + SG+ Q G S+AV
Sbjct: 114 LAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGS 173
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G + SWG SG+LG G + L+ ++ P GV +AG HS I
Sbjct: 174 NGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVP------AGVTFSQVSAGDRHSLAIG 227
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYT 311
NG+ Y +G+ ++ + P+L+S P +V G H+ + S G+ Y
Sbjct: 228 SNGKTYAWGEARGGQLGIGSISRTPAPALVSA-PAGVSFTQVSAGDLHSLAVGSDGKAYA 286
Query: 312 WGSNENGCLG 321
WG+N++G LG
Sbjct: 287 WGNNDSGQLG 296
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 112/274 (40%), Gaps = 47/274 (17%)
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
+F S+ AL+ L + +G +A FG G + +SG+ VV
Sbjct: 3 SFRVASVVALSA-----LLVGMSGSAFAAPAETFGS-------GPTAGGTTVSGVLPGVV 50
Query: 127 --QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
Q+S G +HS A+ DG +Y WG NS+GQLG +P+ V G+ Q +
Sbjct: 51 FTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPV--LVSTPDGVTFTQVSA 108
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE---LEGVKVK 241
G + S+AV G +WG GRLG+G ST P L+ GV +
Sbjct: 109 GADHSLAVGSDGNAYAWGRNTDGRLGNGT---------STGSSVPLLVSAGAVPSGVTIS 159
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----------- 290
AG HS + NG +Y +G + G +L S +P
Sbjct: 160 QVMAGGFHSLAVGSNGDIYSWGYN-------RSGQLGDGTTLASSVPLKVSAGAVPAGVT 212
Query: 291 -EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V G H+ + S G+ Y WG G LGIG
Sbjct: 213 FSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIG 246
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG+GS+ P + SA S ++ G H+L + G YA G ND GQ
Sbjct: 235 WGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQ 294
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + SL P+ +S + V Q+S G HS AI DG Y WG N NGQLG
Sbjct: 295 LGNATTT-SSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTIT 353
Query: 162 AKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+P+ V G+ FT+ A G S+ +WGA G+LG+G
Sbjct: 354 TSTVPV--MVTAPDGVTFTRIEAGGL-HSLTAASDENTYTWGANSFGQLGNGTS 404
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN D G+LG + S PV+ S ++ ++ G H+L + G YA GLN GQ
Sbjct: 287 WGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQ 346
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + I S P+ ++ +I G HS D Y WG NS GQLG G
Sbjct: 347 LG-NNTITTSTVPVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGNGTSD 405
Query: 162 AKVIPI 167
++P+
Sbjct: 406 GSLVPV 411
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H VLT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +A G +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 735
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 131/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+ +T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3293
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P ++ L + A G S +T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3229 TWGKGDYFRLGHG 3241
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G + +T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 737
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ G H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWG 3125
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3126 LGEYGRLGHG 3135
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + GL+ K+V+ ++ G H +T D E++ WG N Q L
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTL 746
Query: 156 GLGKKAAKVIP 166
G+ K P
Sbjct: 747 GVTKPEPTAFP 757
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4282
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4283 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4072 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
>gi|149044295|gb|EDL97616.1| rCG42876 [Rattus norvegicus]
Length = 637
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 30/263 (11%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K D+ + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 66 SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
+K ACG HTL T+TG VYA G N+ GQLG+ + IG+ P I
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ Q+S G + S+A+T DG+L+MWG NS GQ+GL K+ IP E G
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
+ G+ S VT V ++G G G+LG G FL TSE P++I ++ K+
Sbjct: 233 ISCGYYHSAFVT-KKVVYAFGLGQFGQLGLGT------FLFETSE--PKIIDRIKDQKIS 283
Query: 242 IAAAGFLHSACIDENGRVYIFGD 264
+ G H+A + + G +Y FGD
Sbjct: 284 HISCGENHTALMTDIGLMYTFGD 306
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 118/261 (45%), Gaps = 36/261 (13%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P I LK E V+++ G +H
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVKLAACGRNH 136
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G +Y G N+ GQLGLG + G FT KQ + G S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPSDIIKQLSAGANTS 190
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T GK+ WG G++G +S++ P + G + + G+ H
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLKNKSNVC---------IPHEV--TVGKPISWISCGYYH 239
Query: 250 SACIDENGRVYIFG-----DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
SA + + VY FG + LF+ P +I ++ + + CG HT +
Sbjct: 240 SAFVTKK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHISCGENHTAL 294
Query: 303 LTSGGELYTWGSNENGCLGIG 323
+T G +YT+G +G LG+G
Sbjct: 295 MTDIGLMYTFGDGRHGKLGLG 315
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 27 CKRWISSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C + S+ + ++ +G G +G+LGLG+ L P + + + ++CG HT
Sbjct: 235 CGYYHSAFVTKKVVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTAL 294
Query: 86 LTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQI 128
+T+ G +Y G G+LG+ EN P S K VQ+
Sbjct: 295 MTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQL 338
>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1457
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 133/281 (47%), Gaps = 17/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ SR PV + +K + A+ GG H L + G V+A G N FGQ
Sbjct: 1180 WGANGFGQLGDGTTLSRTTPVRVAGLQK--VVAIGAGGYHALAVRSDGSVWAWGYNAFGQ 1237
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+R+ GL V ++ G HHS A+ DG L WG N+ GQLG G
Sbjct: 1238 LG-DGTAESRLLPVRVEGLSN-VTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTT 1295
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ + V+ + G+ +A G ++A+ G G V +WG +LG G +S+
Sbjct: 1296 RYSRV--WVKGVDGVVEVRA--GAAHTLALRGDGTVWTWGDNTHSQLGAGDDST------ 1345
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ PR + L GV AG HS + G V+ +G + ++ + + P
Sbjct: 1346 -RTRIVPRPVPGLSGVTA--IGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPL 1402
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +L V G + + G + +WGS+ +G LG+G
Sbjct: 1403 RVKELAEVSVVSGGADFSLAMQRDGTVSSWGSSLHGALGLG 1443
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 124/281 (44%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P E+ +KA+A A +L L E G V A G N GQ
Sbjct: 274 WGANSSGQLGDGAWSDRAVPARVPGLER--VKAVASMDASSLALLEAGSVLAWGANGSGQ 331
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S + P + GL+ V + G H+ A+ DG L+ WG GQLG G
Sbjct: 332 LGDSGTDDRA-TPGEVPGLRS-VAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSER 389
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V+P P L A G S+A G G V SWG G+LG G + +R
Sbjct: 390 HVVPAP----LLRLADVASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAVR 445
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
++ L G++ +AA+G HS + +G V+ +G A ++ RP
Sbjct: 446 ---------VEGLSGIR-GVAASGH-HSLAVGADGTVWAWGRNAAGQLGDGSTRDRARPV 494
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+S L V GG HT L G ++ WG N G LG G
Sbjct: 495 AVSGLTSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGDG 535
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 138/330 (41%), Gaps = 67/330 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGLG+ RPV + + LA G AHTL + G V A G N GQ
Sbjct: 724 WGYNRFGQLGLGAAGWSSRPVQVRGLGR--VDRLAVGRAHTLMVRPDGAVLAWGENASGQ 781
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+ + G+ V +++G HS A+ DG ++ WG N GQLG G A+
Sbjct: 782 LGDGTTT-HRAGPVLVRGVPC-VRSVASGVLHSLALACDGSVWAWGANGRGQLGDGTTAS 839
Query: 163 KVIP------------------------------------------------IPTKVECL 174
+VIP +P +++
Sbjct: 840 RVIPARVDGLQGAVAVAAGGDASLALLADGTAWAWGANAHGQLGDGSTSDRAVPGQLKLP 899
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
S I + ALG +A G + +WGA GSG+LG G +T TP +K
Sbjct: 900 SNIMS--VALGETHGLAAGEDGALWAWGANGSGQLGEGS---------TTPSPTPVRVKG 948
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEV 293
LEGV A F S + ++G + +G + L NH++R P ++ + +
Sbjct: 949 LEGVASVSAGRAF--SLAVRQDGTAWAWGANPSGQ-LGDGTNHSQRVPKQVTSVKRVRAM 1005
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G +H L G ++TWG N G LG G
Sbjct: 1006 SAGAHHVVALGEDGAVWTWGDNTLGQLGDG 1035
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 122/250 (48%), Gaps = 20/250 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+A G H+L+++ TG V+A G N GQLG L P + +++V + +G HS
Sbjct: 54 IAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPS-PRDIVSVVSGEAHS 112
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G ++ WG NS+GQLG G +V P+ +V L+ + A G S+A+ G
Sbjct: 113 LALDEAGTVWAWGGNSSGQLGDGTTTDRVTPM--QVAGLTDVVA--VAAGDFHSLALRGD 168
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G L TP + LEGV AAGF + + +
Sbjct: 169 GTVWAWGTNFHGQLGRGHTEPGL---------TPEPVPGLEGVVAL--AAGFDFTLAVMD 217
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+G V +G + ++ +G +R P ++ + V G YH L G ++TWG
Sbjct: 218 DGTVRAWGANSSGQL--GDGTFTQRLAPVEVAHISGISAVTAGTYHAVALGKDGGVWTWG 275
Query: 314 SNENGCLGIG 323
+N +G LG G
Sbjct: 276 ANSSGQLGDG 285
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 132/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS R RPV S S+ A+A GG+HT+ L G V+A G N GQ
Sbjct: 474 WGRNAAGQLGDGSTRDRARPVAVSGLT--SVVAVATGGSHTMALRGDGTVWAWGYNALGQ 531
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P+R++ L VV ++ G + S A+ DG ++ WG+ GQ+G G
Sbjct: 532 LGDGTTV-DRLTPVRVARLDS-VVAVAAGTYFSMALRGDGTVWTWGEGFEGQVGDGGGVQ 589
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L+ + + A G ++AV G G V +WG G G+LG G S
Sbjct: 590 RLFPV--QVAGLTNV--TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWS------- 638
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ P + L G+ + G HS + +G V +G ++ RP+
Sbjct: 639 --DRFRPVQVPGLTGITA--VSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPA 694
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + + H L + G L WG N G LG+G
Sbjct: 695 VVPGLTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLG 735
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 129/285 (45%), Gaps = 26/285 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ SR P + A +L L G +A G N GQ
Sbjct: 824 WGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG--DASLALLADGTAWAWGANAHGQ 881
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P ++ L ++ ++ G H A DG L+ WG N +GQLG G
Sbjct: 882 LGDGSTSDRAV-PGQLK-LPSNIMSVALGETHGLAAGEDGALWAWGANGSGQLGEGSTTP 939
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P +V+ L G+ + A F S+AV G +WGA SG+LG G
Sbjct: 940 S--PTPVRVKGLEGVASVSAGRAF--SLAVRQDGTAWAWGANPSGQLGDG---------- 985
Query: 223 STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+ ++ R+ K++ VK V+ +AG H + E+G V+ +GD + ++ +G A
Sbjct: 986 --TNHSQRVPKQVTSVKRVRAMSAGAHHVVALGEDGAVWTWGDNTLGQL--GDGTSAPTW 1041
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +L E V G + + GG + WGSNE G LG G
Sbjct: 1042 MWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDG 1086
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 126/279 (45%), Gaps = 18/279 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G R + ++ G AH+L L E G V+A G N GQ
Sbjct: 73 WGGNTSGQLG-GEATPLQRLAPAPLPSPRDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQ 131
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P++++GL +VV ++ G HS A+ DG ++ WG N +GQLG G
Sbjct: 132 LGDGTTT-DRVTPMQVAGL-TDVVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEP 189
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P P V L G+ A GF+ ++AV G V +WGA SG+LG G
Sbjct: 190 GLTPEP--VPGLEGVVALAA--GFDFTLAVMDDGTVRAWGANSSGQLGDGT--------- 236
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T P + + G+ AG H+ + ++G V+ +G + ++ + P+
Sbjct: 237 FTQRLAPVEVAHISGISA--VTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPA 294
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ L + V + L G + WG+N +G LG
Sbjct: 295 RVPGLERVKAVASMDASSLALLEAGSVLAWGANGSGQLG 333
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 19/291 (6%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q A WG G+LG G+ S+ P ++ ++ ++A++ G H + L E G V+
Sbjct: 967 QDGTAWAWGANPSGQLGDGTNHSQRVPKQVTSVKR--VRAMSAGAHHVVALGEDGAVWTW 1024
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G N GQLG + + P ++ L+ +V ++ G S A+ V G + WG N GQL
Sbjct: 1025 GDNTLGQLGDGTSAPTWMWPRQVPELR-DVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQL 1083
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQE 214
G GK ++ P+ ++E + + Q +VA+ G V +WG G+LG G
Sbjct: 1084 GDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGT- 1142
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ P +++ L GV + G HS + +G V+ +G ++ +
Sbjct: 1143 --------TERRAAPVVVRGLTGVVA--VSTGAWHSLALRSDGTVWAWGANGFGQL--GD 1190
Query: 275 GNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G R P ++ L + GGYH + S G ++ WG N G LG G
Sbjct: 1191 GTTLSRTTPVRVAGLQKVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDG 1241
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 136/287 (47%), Gaps = 25/287 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS PV E + +++ G A +L + + G +A G N GQ
Sbjct: 924 WGANGSGQLGEGSTTPSPTPVRVKGLE--GVASVSAGRAFSLAVRQDGTAWAWGANPSGQ 981
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N + P +++ +K+ V +S G HH A+ DG ++ WG N+ GQLG G A
Sbjct: 982 LGDGTNHSQRV-PKQVTSVKR-VRAMSAGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAP 1039
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P +V L + + A G + SVAV GG +WG+ G+LG G+ L
Sbjct: 1040 TWM-WPRQVPELRDV--EAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRL---- 1092
Query: 223 STSEYTPRLIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
TP ++ +E K V+ A H+ + +G V +GD A ++ +G
Sbjct: 1093 -----TPVQVR-IEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQL--GDGTTE 1144
Query: 279 RR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RR P ++ L V G +H+ L S G ++ WG+N G LG G
Sbjct: 1145 RRAAPVVVRGLTGVVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDG 1191
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 126/288 (43%), Gaps = 22/288 (7%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
A WG+ +YG+LG G R PV + ++ + ++ + H + L G V A G
Sbjct: 1072 AHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWG 1131
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG P+ + GL VV +STG HS A+ DG ++ WG N GQLG
Sbjct: 1132 DNAHGQLG-DGTTERRAAPVVVRGLTG-VVAVSTGAWHSLALRSDGTVWAWGANGFGQLG 1189
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P+ +V L + A G ++AV G V +WG G+LG G S
Sbjct: 1190 DGTTLSRTTPV--RVAGLQKVVAIGA--GGYHALAVRSDGSVWAWGYNAFGQLGDGTAES 1245
Query: 217 ILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
L L +EG+ V A G HS + +G + +G+ A ++ G
Sbjct: 1246 RL------------LPVRVEGLSNVTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTG 1293
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + EV G HT L G ++TWG N + LG G
Sbjct: 1294 TTRYSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAG 1341
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 125/281 (44%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G E P E + ALA G TL + + G V A G N GQ
Sbjct: 174 WGTNFHGQLGRGHTEPGLTPEPVPGLE--GVVALAAGFDFTLAVMDDGTVRAWGANSSGQ 231
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+ ++ + + ++ G +H+ A+ DG ++ WG NS+GQLG G +
Sbjct: 232 LG-DGTFTQRLAPVEVAHISG-ISAVTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSD 289
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P +V L + K A S+A+ G VL+WGA GSG+LG
Sbjct: 290 RA--VPARVPGLERV--KAVASMDASSLALLEAGSVLAWGANGSGQLGDSG--------- 336
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ TP + L V + G H+ + +G ++ +G ++ P+
Sbjct: 337 TDDRATPGEVPGLRSVAAVV--GGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPA 394
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +L + G +H+ G +++WG N G LG G
Sbjct: 395 PLLRLADVASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDG 435
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 121/281 (43%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ R V ++ +A G H+L + G V+A G N GQ
Sbjct: 424 WGRNTYGQLGDGTTAERHAAVRVEGLS--GIRGVAASGHHSLAVGADGTVWAWGRNAAGQ 481
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+ +SGL VV ++TG H+ A+ DG ++ WG N+ GQLG G
Sbjct: 482 LGDGSTRDRA-RPVAVSGLTS-VVAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVD 539
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V L + A F S+A+ G G V +WG G +G
Sbjct: 540 RLTPV--RVARLDSVVAVAAGTYF--SMALRGDGTVWTWGEG---------FEGQVGDGG 586
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L V AAG H+ + +G V+ +GD ++ + RP
Sbjct: 587 GVQRLFPVQVAGL--TNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPV 644
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L V G H+ L G + WG N G LG G
Sbjct: 645 QVPGLTGITAVSGGRSHSMALHGDGSVRAWGYNGYGQLGDG 685
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + +LG G +R R V + A+ G H+ + G V+A G N GQ
Sbjct: 1330 WGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAIGAGARHSFAVGPKGTVWAWGRNSHGQ 1389
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ +N + EPLR+ L EV +S G S A+ DG + WG + +G LGLG
Sbjct: 1390 LGLGDNANRA-EPLRVKELA-EVSVVSGGADFSLAMQRDGTVSSWGSSLHGALGLGTAGQ 1447
Query: 163 KVIP 166
+ P
Sbjct: 1448 RSSP 1451
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI---PIPTKVECLSGIFTKQA 182
++I+ G HS ++ G ++ WG N++GQLG + + P+P+ + +S + +
Sbjct: 52 MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSVVSGEAH 111
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
+L +++ G V +WG SG+LG G +T TP + L V
Sbjct: 112 SLALDEA------GTVWAWGGNSSGQLGDGT---------TTDRVTPMQVAGL--TDVVA 154
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-LPYSEEVV---CGGY 298
AAG HS + +G V+ +G Q G P L + +P E VV G
Sbjct: 155 VAAGDFHSLALRGDGTVWAWG----TNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFD 210
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
T + G + WG+N +G LG G
Sbjct: 211 FTLAVMDDGTVRAWGANSSGQLGDG 235
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 134/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3138 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3197
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P +++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3198 LGHGDN-ATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3256
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3257 SEGSA--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3312
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3313 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3363
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3364 NKKPALVIGLDAVFVNRVACGSSHS 3388
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 131/287 (45%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3085 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3144
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 3145 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3203
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P +V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3204 ATQLKP--KQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3256
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3257 ----SEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3312
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P I L V G H +T G++Y WG N++G G G
Sbjct: 3313 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3359
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4257 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGR 4316
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4317 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4374
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4375 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4431
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH + G VY +GD ++ +
Sbjct: 4432 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4484
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4485 RPRLVAALQGKHIVKVTCGSAHTLALST 4512
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4151 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4208
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4209 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4267
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4268 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGD---- 4321
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4322 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4371
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S KLPY E V CG + LT G +YTWG + LG G
Sbjct: 4372 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4426
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4237 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4294
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4295 AHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4352
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4353 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4403
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4404 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4463
Query: 309 LYTWGSNENGCLGIG 323
+YTWG N+ G LG G
Sbjct: 4464 VYTWGDNDEGQLGDG 4478
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 137/301 (45%), Gaps = 43/301 (14%)
Query: 42 LWGNGDYGRLG-----------LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TET 89
+WG D +LG SR RP+ S GG+ +LF+ ++
Sbjct: 3031 VWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIS------------GGSKSLFIVSQD 3078
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
G V+A G G+LG+ L P ++ L + VV+ + +G H+ A+T+DG+++
Sbjct: 3079 GKVFACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3137
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG+ +G+LG G + + P VE L + A G S A++ G++ +WG G
Sbjct: 3138 WGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEY 3195
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD 264
GRLGHG + ++ P+ + L G +V A G + + E+G V+ +GD
Sbjct: 3196 GRLGHGDNA---------TQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3246
Query: 265 RAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
K+ + P I +L ++ CG + LT GE++TWG + LG
Sbjct: 3247 GDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3306
Query: 323 G 323
G
Sbjct: 3307 G 3307
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 38/261 (14%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ +K +AC + L L++ G +Y +LG E LEP I L +E +
Sbjct: 570 RFQVKQIACSESLLLLLSQDGKLYNC------RLGKPE-----LEPQPIEELAQETILSI 618
Query: 130 TGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQA 182
G+ H AI + Y WG + +LG G A+ +P TK+ C+ +F
Sbjct: 619 AGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP--TKISALDRCVKAVFC--- 673
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G S A+T G + +WG G GRLGHG S + P ++ L ++
Sbjct: 674 --GCSYSAAITWSGNLYTWGRGTYGRLGHGN---------SDDQCVPAIVMALAEYEIID 722
Query: 243 AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
A +G HS C+ G VY +GD K+ N + +P L+ LP + + G +
Sbjct: 723 VALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQRIFAGAQSS 782
Query: 301 CVLTSGGELYTWGSNENGCLG 321
LT+ G LY+WG + CLG
Sbjct: 783 MALTTEGHLYSWG--KASCLG 801
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + + P + A ++ + AL G AH+L LT G VYA G D+
Sbjct: 690 WGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDY 749
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V +I G S A+T +G LY WGK S ++
Sbjct: 750 GKLG-NGNCNSSLQPILVETLPR-VQRIFAGAQSSMALTTEGHLYSWGKASCLGHQQVER 807
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ + +P V L A+G +A+T G+V WG S ++
Sbjct: 808 SVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDSQQI 856
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 113/229 (49%), Gaps = 16/229 (6%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
R A WG G+ RLG G +R P SA ++ +KA+ CG +++ +T +G +Y G
Sbjct: 634 RNAYSWGAGEDHRLGHGDTHARAVPTKISALDR-CVKAVFCGCSYSAAITWSGNLYTWGR 692
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
+G+LG + + + ++ + E++ ++ +G HS +T +G +Y WG G+L
Sbjct: 693 GTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKL 752
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-E 214
G G + + PI VE L + ++ G + S+A+T G + SWG LGH Q E
Sbjct: 753 GNGNCNSSLQPI--LVETLPRV--QRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVE 806
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S+ G PRL+ L+ ++ A G H + G V+ +G
Sbjct: 807 RSVQGC------SVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWG 849
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 22/274 (8%)
Query: 50 RLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISE 107
RLG LE P + ++ ++A C G H L + Y+ G + +LG +
Sbjct: 596 RLGKPELE----PQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGD 651
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
++ P +IS L + V + G +S+AIT G LY WG+ + G+LG G + +P
Sbjct: 652 THARAV-PTKISALDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPA 710
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
I G S+ +T G V +WG G G+LG+G +S L + E
Sbjct: 711 IVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPI--LVET 768
Query: 228 TPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
PR+ + G + +A G L+S G+ G + V++ + P L+S
Sbjct: 769 LPRVQRIFAGAQSSMALTTEGHLYSW-----GKASCLGHQQVERSV----QGCSVPRLVS 819
Query: 286 KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
L + +V G H LTS GE++ WG N++
Sbjct: 820 SLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDS 853
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 89/236 (37%), Gaps = 65/236 (27%)
Query: 144 LYMWGKNSNGQLG--LGKKAAKVIP----------------------------------- 166
+Y WG N GQLG G + P
Sbjct: 4148 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4207
Query: 167 -------------IPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGH 211
IPT + L +F K+ A+ G + +A+T G+V +WG G G+LGH
Sbjct: 4208 GGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4267
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G S P+L++ L G+ V A G HSA I +G V +G ++
Sbjct: 4268 GNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLG 4318
Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4319 HGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4374
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 95/253 (37%), Gaps = 45/253 (17%)
Query: 92 VYATGLNDFGQLGISENIGYSLEP-----------------LRISGLKKEVVQISTGYHH 134
VYA G + E G+S EP L + + +V QI+
Sbjct: 527 VYALGWPSLSK----EQPGFSAEPSTVTPSWSSQDPLLVGSLPLLNCRFQVKQIACSESL 582
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++ DG+LY N +LG ++ P P + I + +A+
Sbjct: 583 LLLLSQDGKLY------NCRLG----KPELEPQPIEELAQETILSIAGHCEGRHFLAIDS 632
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
SWGAG RLGHG + + P I L+ VK G +SA I
Sbjct: 633 NRNAYSWGAGEDHRLGHGD---------THARAVPTKISALDRC-VKAVFCGCSYSAAIT 682
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELY 310
+G +Y +G ++ + P+++ L E + G H+ LTS G +Y
Sbjct: 683 WSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVY 742
Query: 311 TWGSNENGCLGIG 323
WG + G LG G
Sbjct: 743 AWGDGDYGKLGNG 755
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4008 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4067
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4068 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4125
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4126 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4182
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4183 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4235
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4236 RPRLVAALQGKKVNRVACGSAHT 4258
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3015 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3074
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3075 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3132
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3133 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3189
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3190 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3238
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3239 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3270
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 508
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 566
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 567 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 617
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 677
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 678 SWGSNDQ 684
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2961 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3020
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3021 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3079
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3080 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3133
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3134 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3188
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3189 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3236
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 436
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 492
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 601 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 638
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3968 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4026
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4027 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4084
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4085 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4135
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4136 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4195
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4196 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4229
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 465 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 523
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 524 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 583 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 640
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 641 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3902 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3959
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3960 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4017
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4018 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4072
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4073 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4126
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4127 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4177
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2943 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3002
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3003 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3060
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3061 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3111
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3112 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3171
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3172 TWGKGDYFRLGHG 3184
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2897 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2954
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3008
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3009 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3068
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3069 LGEYGRLGHG 3078
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 521 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 581 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 640 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3897 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3955
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3956 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4015
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4016 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4066
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4067 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4125
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 634
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 635 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 691
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P PT L G+ TK A G QS A
Sbjct: 692 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 721
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4166 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4225
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4226 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4260
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3895 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3954
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4014
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4015 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4069
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H L TE G VYA G N + QLG + N
Sbjct: 60 LGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN 119
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A++ DG+LY WG N+ GQ+G G A + P P
Sbjct: 120 QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 177
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 178 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP + L GV + A G+ H+ + + G +Y +G ++ GN + + S + +
Sbjct: 229 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPLQIM 286
Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
E VV C HT T G++Y WG
Sbjct: 287 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 164
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 224 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
L +++ E E V V+IAA H SA ++G+VY++G
Sbjct: 282 PL--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 211 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 270
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L PL+I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 271 LG-TGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 322
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 323 -SVVLPHLTHFACTDDVF 339
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
++SN + +GK + P ++ + + +F A +++ T +V +G S
Sbjct: 2 RHSNIMVDVGKWPIFTLLSPQEIASIRKACVFGTSA----NEAIYTTHNDEVFVFGLNCS 57
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDR 265
LG G S + P+ ++ L G K+ + G H E+G VY +G
Sbjct: 58 NCLGTGDSQSTI---------VPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHN 108
Query: 266 AVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ N P + L EV CG +H+ L+ G+LY WG N G +G
Sbjct: 109 GYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGS 168
Query: 323 G 323
G
Sbjct: 169 G 169
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 122/235 (51%), Gaps = 17/235 (7%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
V++ G + GQLGI + EP + L+ + ++ G +H++A+ +G+LY WG
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQD-EPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGG 59
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G ++ P +VE L G+ A G + VT G + +WG +G
Sbjct: 60 GMYGKLGHGNESGH--STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVA 117
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVD 268
GHG +YTP+L++ L G KV +++A GF H+AC+ ++ + +G+
Sbjct: 118 GHGDTEG--------HQYTPKLLERLNGKKVVQLSACGF-HTACLTDDHETFAWGEGKFG 168
Query: 269 KMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ + P LI L Y +V CGG+H+ V+T G++YT+G E+G LG
Sbjct: 169 RLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLG 223
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-KALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+ G+LG+G + P A + + CG HT + G +Y G +G
Sbjct: 4 WGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYG 63
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG G+S P R+ L +V I+ G H++ +T G LY WG NG G G
Sbjct: 64 KLGHGNESGHST-PRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDT 122
Query: 161 AAKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P +E L+G Q +A GF + +T + +WG G GRLG+G E +
Sbjct: 123 EGHQY-TPKLLERLNGKKVVQLSACGF-HTACLTDDHETFAWGEGKFGRLGNGTERNC-- 178
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
++PRLI+ L G A G HSA I +G++Y FG ++ + +
Sbjct: 179 -------HSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKL 231
Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+P+L+ L +++ CG H+ LTS GE +
Sbjct: 232 KPTLVEALDGVVVKQITCGWSHSVALTSEGEYH 264
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG G+ P A S+ +ACG HT +T GC+Y G + G
Sbjct: 57 WGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGV 116
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G + G+ P + L K+VVQ+S H++ +T D E + WG+ G+LG G +
Sbjct: 117 AGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTE- 175
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P +E L G + Q A G S +T GK+ ++G G G+LGH + + L
Sbjct: 176 -RNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKL--- 231
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
P L++ L+GV VK G+ HS + G ++
Sbjct: 232 ------KPTLVEALDGVVVKQITCGWSHSVALTSEGEYHL 265
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWG 202
++ WG+ +GQLG+G + + PT V+ L G+ G + AV G + +WG
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQ--DEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWG 58
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G G+LGHG ES TPR ++ L G+ + A G H+A + G +Y +
Sbjct: 59 GGMYGKLGHGNESG---------HSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTW 109
Query: 263 GDR--AVDKMLFQEGNHARRPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNEN 317
GD+ V EG H P L+ +L + V CG +HT LT E + WG +
Sbjct: 110 GDKENGVAGHGDTEG-HQYTPKLLERLNGKKVVQLSACG-FHTACLTDDHETFAWGEGKF 167
Query: 318 GCLGIG 323
G LG G
Sbjct: 168 GRLGNG 173
>gi|116328469|ref|YP_798189.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116121213|gb|ABJ79256.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 506
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S+ P+ + GL +V+Q+ G HS+A+T GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLS-DVIQVIAGSEHSAALTKSGEVYVWG 318
Query: 149 KNSNGQLGLGK-KAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ AA I P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASDGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H L GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 120/262 (45%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AIT +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 190 SMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V IA
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLSDVIQVIA-- 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
G HSA + ++G VY++G + L P + L +++ G H
Sbjct: 301 GSEHSAALTKSGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
L S G +Y+WG N +G LGIG
Sbjct: 361 ALASDGRIYSWGLNASGQLGIG 382
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
S IF+ + F Q S+A+T G+V +WG G+LG G ++ R+ P +
Sbjct: 178 SNIFS----IHFNQNNSMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233
Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ G+ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMNPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 292 LSDVIQVIAGSEHSAALTKSGEVYVWGRNQYGNLGNG 328
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 73/176 (41%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASDGRIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P L I G S +I +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + P K V + + G + A+ G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A + +L+ G G H L TE G VYA G N + QLG + N
Sbjct: 60 LGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN 119
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A++ DG+LY WG N+ GQ+G G A + P P
Sbjct: 120 QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 177
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+V CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 178 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQL--------- 228
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
TP + L GV + A G+ H+ + + G +Y +G ++ GN + + S + +
Sbjct: 229 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPLQIM 286
Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
E VV C HT T G++Y WG
Sbjct: 287 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L+ G +YA G N+ G
Sbjct: 105 WGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCG 164
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 165 QVG-SGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGN 223
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + +WGA G+LG G +S+ L
Sbjct: 224 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 281
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
L +++ E E V V+IAA H SA ++G+VY++G
Sbjct: 282 PL--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 211 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 270
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L PL+I K+ VV+I+ + H S+A T G++YMWG+ GQ
Sbjct: 271 LG-TGNKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 322
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 323 -SVVLPHLTHFACTDDVF 339
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 13/140 (9%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+++ T +V +G S LG G S + P+ ++ L G K+ + G
Sbjct: 39 EAIYTTHNDEVFVFGLNCSNCLGTGDSQSTI---------VPKKLEALCGKKISSLSYGS 89
Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
H E+G VY +G ++ N P + L EV CG +H+ L
Sbjct: 90 GPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMAL 149
Query: 304 TSGGELYTWGSNENGCLGIG 323
+ G+LY WG N G +G G
Sbjct: 150 SFDGDLYAWGYNNCGQVGSG 169
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 79 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 137
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 138 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 195
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 196 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 246
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 247 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 304
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 305 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 338
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 33 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 91
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 92 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 151
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 152 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 201
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 202 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 261
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 262 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 295
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 231 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 290
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 291 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 343
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 344 --SVILPHLTHFSCTDDVF 360
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 81 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 140 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 248
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 128/270 (47%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 61 LGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 119
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 120 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQ--PT 177
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + ++
Sbjct: 178 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG---------NNVNQ 228
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 229 LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 288
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 289 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 318
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 106 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCG 165
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 166 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 224
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 225 NVNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 282
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 283 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 318
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 212 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 271
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 272 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 323
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T + C +F
Sbjct: 324 -SVILPHLTHLSCTDDVF 340
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + IP K+E
Sbjct: 20 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--IPKKLE 76
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 77 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 133
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 134 IKQVVEV-----ACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 188
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 189 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 223
>gi|116331201|ref|YP_800919.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116124890|gb|ABJ76161.1| RCC1 domain-containing protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 506
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + A G H L L G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S+ P+ + GL +V+Q+ G HS+A+T GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLS-DVIQVIAGSEHSAALTESGEVYVWG 318
Query: 149 KNSNGQLGLGK-KAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ AA I P KVE LSGI KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASDGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + + V+ CG H L GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 120/262 (45%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY G N+FGQLG + G + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
S AIT +G +Y WG N+ GQLG+G +AA PT V ++ A GF
Sbjct: 190 SMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
++ + G V+++G G+LG+G L + S P + L V IA
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLSDVIQVIA-- 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
G HSA + E+G VY++G + L P + L +++ G H
Sbjct: 301 GSEHSAALTESGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
L S G +Y+WG N +G LGIG
Sbjct: 361 ALASDGRIYSWGLNASGQLGIG 382
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
L+KEV ++S G HS + +GE+Y G+N+ GQLG G + + K+ +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
S IF+ + F Q S+A+T G+V +WG G+LG G ++ R+ P +
Sbjct: 178 SNIFS----IHFNQNNSMAITKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233
Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
+ G+ + A GF H+ + +G V FG V ++ + + P +
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMNPVAVVG 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 292 LSDVIQVIAGSEHSAALTESGEVYVWGRNQYGNLGNG 328
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 73/176 (41%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASDGRIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P L I G S +I +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQVLNITNASSIWAGGTQSFSILKNGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + P K V + + G + A+ G G++ WG G LG
Sbjct: 434 AIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 81 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 140 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 248
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
Length = 1126
Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats.
Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 32/261 (12%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS---GLKKEVVQISTGY 132
+ACG HTL + E +Y+ G+ G LG LE ++I LK++ VQ++ G
Sbjct: 26 IACGHHHTLIIDENNQLYSFGMGKTGLLG-----NEHLEDVKIPQQLNLKQKFVQVACGA 80
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
HS A+T+ G ++ WGKN GQLG G + + P K + I + G + S V
Sbjct: 81 THSLALTISGIIFSWGKNLRGQLGHGNQNDCLKP---KEVIQNDIIAEYIDCGDQHSAFV 137
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
+ ++ +WG G RLGHG +T E P+ + LE V + G H+
Sbjct: 138 SKNKELYTWGNGQYYRLGHGV---------TTDELIPKKVVVLEDYYVTHVSCGMNHTLI 188
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLI------SKLPYSEEVVCGGYHTCV 302
+ G VY +GD K+ E + R +I +K+ Y +V G H+
Sbjct: 189 VTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYY--QVAAGSMHSLA 246
Query: 303 LTSGGELYTWGSNENGCLGIG 323
L++ G+++TWGS+++G LGIG
Sbjct: 247 LSTNGQIFTWGSSKSGNLGIG 267
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 69/228 (30%), Positives = 102/228 (44%), Gaps = 22/228 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G G LG LE P + K +ACG H+L LT +G +++ G N GQ
Sbjct: 45 FGMGKTGLLGNEHLEDVKIPQQLNL--KQKFVQVACGATHSLALTISGIIFSWGKNLRGQ 102
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-------ISTGYHHSSAITVDGELYMWGKNSNGQL 155
LG N L+P KEV+Q I G HS+ ++ + ELY WG +L
Sbjct: 103 LG-HGNQNDCLKP-------KEVIQNDIIAEYIDCGDQHSAFVSKNKELYTWGNGQYYRL 154
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ IP KV L + + G ++ VTG G V +WG G G+LG ++
Sbjct: 155 GHGVTTDEL--IPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDC 212
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ K +V AAG +HS + NG+++ +G
Sbjct: 213 KTQTLPTRVGMICKKFRKNKMYYQV---AAGSMHSLALSTNGQIFTWG 257
Score = 82.4 bits (202), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG Y RLG G P E + + ++CG HTL +T G VYA G +G+
Sbjct: 146 WGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAWGDGMYGK 205
Query: 103 LGISENIGYSLEPLRISGLKKEV------VQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LG+SE+ P R+ + K+ Q++ G HS A++ +G+++ WG + +G LG
Sbjct: 206 LGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTWGSSKSGNLG 265
Query: 157 LG 158
+G
Sbjct: 266 IG 267
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 66/285 (23%), Positives = 121/285 (42%), Gaps = 42/285 (14%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
RP F+ + ++ ++C H + +++ G Y G N + QLG+ + Y+ P ++ G
Sbjct: 418 RPFQIQYFKNNIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQG 477
Query: 121 L--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ K ++ + S+ +T GE++ +G + G LG +K V+P P V + +
Sbjct: 478 ILETKTIIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDIPQMI 537
Query: 179 TKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLG---HGQESSILGF--LRSTSEYTPRLI 232
A G + V+++ + L +WG G+LG + E ++ + ++ + I
Sbjct: 538 --YIACGPQGMVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQI 595
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----------------DKMLFQEGN 276
K E V++K G HS ID NG++Y G R D+ + N
Sbjct: 596 KP-EEVQIKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGIDDQFILIRTN 654
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLT--------SGGELYTWG 313
+ I +V C YHT L+ + +Y WG
Sbjct: 655 ELQNQQFI-------QVSCSEYHTLALSIQEQGEEQAQQYVYAWG 692
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 26/187 (13%)
Query: 36 QRRFAALWGNGDYGRLGLG-SLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVY 93
Q+ A +WG Y +LG+G S + P E ++ AC + LT+ G V+
Sbjct: 445 QKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSACSDKFSALLTDKGEVW 504
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-ELYMWGKNSN 152
G +D G LG E Y + ++ +++ I+ G +I+ +LY WG N
Sbjct: 505 TFGTSDCGVLGHQEKNYYVVPEPKMVNDIPQMIYIACGPQGMVSISAHKRQLYAWGNNIY 564
Query: 153 GQLGL-----------------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
GQLG+ GK+ P +V+ K +G SVA+
Sbjct: 565 GQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKPEEVQ------IKSVDMGMFHSVAIDNN 618
Query: 196 GKVLSWG 202
GK+ S G
Sbjct: 619 GKIYSCG 625
Score = 44.3 bits (103), Expect = 0.077, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +++ + + + ++A++ G+ WG +LG G + Y
Sbjct: 419 PFQIQYFKNNIIRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNY--------NY 470
Query: 228 TPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLI 284
P+ ++ LE + ++A SA + + G V+ FG + QE N+ P ++
Sbjct: 471 IPQKLQGILETKTIIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMV 530
Query: 285 SKLPYSEEVVCGGYHTCVLTSGG-ELYTWGSNENGCLGI 322
+ +P + CG +++ +LY WG+N G LGI
Sbjct: 531 NDIPQMIYIACGPQGMVSISAHKRQLYAWGNNIYGQLGI 569
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 39 FAALWGNGDYGRLGLGS-LESRWRP----VVCSAFEKHSLK-ALACGGAHTLFLTETGCV 92
F WG+G YG+LG+ +++ P ++C F K+ + +A G H+L L+ G +
Sbjct: 194 FVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQI 253
Query: 93 YATGLNDFGQLGISENI---GYSLEPLRIS 119
+ G + G LGI N Y +P +IS
Sbjct: 254 FTWGSSKSGNLGIGYNKDIQDYYTQPQKIS 283
Score = 40.8 bits (94), Expect = 0.94, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL--GKKAAKVIPIPTKV 171
KK + +S G H+ AI DG+ ++WG NG+LGL K+ +K PT V
Sbjct: 761 KKSIKYVSAGIFHNIAIGSDGKCFVWGSFQNGKLGLVVNKQNSKTQNCPTYV 812
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCQISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 238 GLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 127/270 (47%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS + DGE+Y WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V +WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHVMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P + K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHVMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G VY +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLG 216
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 14/255 (5%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
AL+ G H +T+TG VY G +GQLG +++ + P + +K EV +S G+
Sbjct: 275 FSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVD-KIIPQPVPRIKGEVKSVSAGF 333
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+H+ A+T G L+ WG G+LG A ++IP G+ A G ++ +
Sbjct: 334 YHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVL 393
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G+V S+G+G SGRLGHG ++ +++P + LE + AAGF HS
Sbjct: 394 NRRGQVFSFGSGDSGRLGHGNDN---------DQWSPTFLSALESERCVSIAAGFAHSVA 444
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGE 308
+ + G++Y +G + ++ + P ++ + + V G HTC+ S G
Sbjct: 445 LTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGS 504
Query: 309 LYTWGSNENGCLGIG 323
L T G +G + G
Sbjct: 505 LITLGRVSHGRMAEG 519
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 18/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG+LG G + P K +K+++ G HT+ +T G ++ G G+
Sbjct: 297 WGQGRYGQLGHGDDVDKIIPQPVPRI-KGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGK 355
Query: 103 LGISENIGYSLEPLRISGLKK---EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++N L P ++ + V G H+ + G+++ +G +G+LG G
Sbjct: 356 LGHNDN-AQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGN 414
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ PT + L A GF SVA+T G++ +WG G GRLGHG +S
Sbjct: 415 DNDQW--SPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDS---- 468
Query: 220 FLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFG 263
E PR + + + +K AAG H+ G + G
Sbjct: 469 -----DEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLG 509
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+GD GRLG G+ +W P SA E ++A G AH++ LT+ G +Y G G+
Sbjct: 402 FGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGR 461
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG + L P +++ + + ++ ++ G H+ +G L G+ S+G++ G
Sbjct: 462 LGHGSDSDEVL-PRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGS 520
Query: 160 KAAKVI 165
A ++
Sbjct: 521 CAQDML 526
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLG---------NSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 27/294 (9%)
Query: 46 GDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYA 94
GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 10 GDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFV 69
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSN 152
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 70 LGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAY 128
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
QLG G ++P LS + A G S+ +T G+V +WG SG++G G
Sbjct: 129 SQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSG 187
Query: 213 QESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
+ ++ PR + L+ V A G + + ++G VY++G ++
Sbjct: 188 S---------TINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLG 238
Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 239 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 149/317 (47%), Gaps = 50/317 (15%)
Query: 43 WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG LG+G ++ PV + + + +ACG H++ LT G VY+ G N
Sbjct: 818 WGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWGSNH 876
Query: 100 FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+GQLG G + P+ + L E +V +S G +HS AI+ G+L+ WG GQLG G
Sbjct: 877 YGQLGTGRR-GQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHG 935
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A P ++ L A G+ S+ +T GKV ++G+G G+LG+G + I
Sbjct: 936 --AIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKI- 992
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-------------R 265
TS + E +K + H+ + + GR+Y +G R
Sbjct: 993 -----TSPVPVYGLPE----PIKCIYTAYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKR 1043
Query: 266 AVDKMLFQEGNHARR----------------PSLISKLPYSEEVV---CGGYHTCVLTSG 306
A ++++ EG+ A P+L+ S ++ CG +H+ V+++
Sbjct: 1044 ARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTT 1103
Query: 307 GELYTWGSNENGCLGIG 323
G+LYTWG N +G LG+
Sbjct: 1104 GQLYTWGLNLDGQLGVS 1120
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 107 ENIGYSLEPL-RISGLKKEVVQIST---GYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
E++ YS +P+ +S + E+ S+ G+ H++ I + +LY WG +S G LG+G
Sbjct: 775 ESVSYSHQPISNVSDSENEIEHKSSLGAGWAHAAHIR-NHKLYTWGHSSYGCLGVGPHMT 833
Query: 163 KV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K P P + Q A G S+A+T G V SWG+ G+LG G+
Sbjct: 834 KTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWGSNHYGQLGTGR-------- 884
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R + Y P L+ L + +AG HS I +G+++ +G ++ + +P
Sbjct: 885 RGQAPY-PMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHGAIDDCEKP 943
Query: 282 SLISKLPYSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIG 323
L+ L +E ++ GGY H+ +LTS G+++T+GS G LG G
Sbjct: 944 KLLKSLE-NENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNG 987
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 40/214 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG------ 96
+G+G +G+LG GS PV + +K + H L L++ G +Y G
Sbjct: 976 FGSGSFGQLGNGSTTKITSPVPVYGLPE-PIKCIYTAYFHNLALSDVGRLYTWGSSPQVL 1034
Query: 97 ---------------LNDFGQLGISENIGYS-------LEPLRI--SGLKKEVVQISTGY 132
LN+ Q +E + L P + S + ++ Q+ G
Sbjct: 1035 RFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGC 1094
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV---------ECLSGIFTKQAA 183
HHS+ I+ G+LY WG N +GQLG+ +++P T V SG K+
Sbjct: 1095 HHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVR 1154
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + ++A+ K+ WG+ G+LG E +
Sbjct: 1155 CGADFTLALDAANKLWGWGSNHEGQLGKIPEEDL 1188
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P+ + ++ + G HT+ LT++G V++ G ND
Sbjct: 4 WGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGNNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + +P ++ GL + +IS G +H+ A G+L+ WG +S+GQLG
Sbjct: 64 DQLGHKKQ---RTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNG 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P+P ++ L+ Q + G S+A+T G++ SWG G+LG G
Sbjct: 121 TTQ---PLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLG------- 170
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+RS E P LIK L G+ + A G HS + ++G +Y +G ++ + +
Sbjct: 171 -MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKL 229
Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L + + CG + L++ G ++T G+ G LG G
Sbjct: 230 HPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHG 275
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 132/275 (48%), Gaps = 22/275 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN D +LG + R +P + + + ++CGG HTL E G ++ G + GQL
Sbjct: 59 GNNDLDQLG--HKKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQL 116
Query: 104 GISENIGYSLEPLR--ISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G + + +PL I L +VQIS G +HS A+T +GELY WG N +GQLGLG +
Sbjct: 117 GFNG----TTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMR 172
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ PT ++ L GI A G S A++ G + WG G+LG E + L
Sbjct: 173 -SEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P +K L ++VK A G SA + +G V+ G ++ ++
Sbjct: 231 --------PTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEIL 282
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTW 312
P I +L S +V CG HT L S G +Y++
Sbjct: 283 PRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG +G+LGLG I P + Q +G +V +T G+V S G
Sbjct: 1 MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+LGH ++ + P ++ L+ ++ + G H+ +E G+++ +G
Sbjct: 61 NDLDQLGHKKQRT-----------KPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWG 109
Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ ++ F G P +I L + ++ CG H+ LT+ GELY+WG N +G LG
Sbjct: 110 SDSHGQLGFN-GTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLG 168
Query: 322 IG 323
+G
Sbjct: 169 LG 170
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Query: 9 MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWR 61
M Y KQ + S LGI +I+ FA WG YG+LGL E++
Sbjct: 171 MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH 230
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P +K +ACG + FL+ G V+ G +GQLG L P +I L
Sbjct: 231 PTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEIL-PRKIMEL 289
Query: 122 K-KEVVQISTGYHHSSAIT 139
V Q+S G H+ A+
Sbjct: 290 MGSTVTQVSCGKRHTLALV 308
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 81 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 140 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 248
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 203
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
Length = 4191
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 146/307 (47%), Gaps = 46/307 (14%)
Query: 39 FAALW-------GNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTET 89
FA W G G YGRLGLG ++ P ++ K L + HTL L ET
Sbjct: 392 FAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVK-KLSSSKGSDGHTLALAET 450
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMW 147
G VY+ G D+G+LG N +P RI+G L K + I GY HS+A+T DG+LY W
Sbjct: 451 GVVYSWGDGDYGKLG-HGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTW 509
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGS 206
G+ +G+LG G A+ +PT+V L+ + + A G ++ V+ GK V S+G+G
Sbjct: 510 GEGDHGRLGHGDSNARY--VPTQVAGLAEVGS--VACGSSHTLVVSKDGKTVWSFGSGEH 565
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G+LG G+ + Y P++++ L+G+ ++ AG S + G VY +G
Sbjct: 566 GKLGTGELGKV---------YRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGA 616
Query: 264 -------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
D V+ ++ E R IS G H LT E++ WG+N
Sbjct: 617 ILGKGSADAIVNLPMYVEDLAQYRIVDIS---------AGDNHCLALTDEHEVFAWGTNS 667
Query: 317 NGCLGIG 323
G G G
Sbjct: 668 MGQCGQG 674
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 146/287 (50%), Gaps = 21/287 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V S+ + + LA H+L L E+G V++ G DF
Sbjct: 3382 GEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDF 3441
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ E VVQ++ G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 3442 GKLG-HGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGS 3500
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
A K +P +V L G Q A G + V T G V ++G G G+LG L
Sbjct: 3501 VANK--KLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLG-------L 3551
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
G+ +T + P+ ++ + + +K G + + ++G+V++ G DR LF+E
Sbjct: 3552 GY--ATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRE-RA 3608
Query: 278 ARRPSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+P +++ L YS E++ G H LT+ G++ WG G LG+
Sbjct: 3609 VFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGL 3655
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G+ + + RP A + + +ACG H+ +T G ++ G DFG+
Sbjct: 3436 WGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGK 3495
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
LG+ L P R+ L+ + Q++ G +H++ ++ DG ++ +G+ G+LGLG
Sbjct: 3496 LGLGSVANKKL-PERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYA 3554
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K+ +P KVE + + K+ G ++ +T GKV G R+
Sbjct: 3555 TMKL--LPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVF---VCGIDRMPWH------SL 3603
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R + + P+++ L ++ A G H + G+V +G ++ + R
Sbjct: 3604 FRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRH 3663
Query: 281 PSLISKL 287
P +I++L
Sbjct: 3664 PEIITEL 3670
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 130/264 (49%), Gaps = 26/264 (9%)
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGL 121
VCSA E S + + E VY G N QL G E I L P++ S +
Sbjct: 330 VCSAVETTSESEVG--------VYEKSDVYVWGSNSSHQLAEGNQEKI---LMPVK-SKM 377
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTK 180
+V Q+ G + + AI DG + GK S G+LGLG+ + + +P ++C + + +
Sbjct: 378 FTQVQQVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSS 437
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
+ + G ++A+ G V SWG G G+LGHG +T + R+ G +
Sbjct: 438 KGSDG--HTLALAETGVVYSWGDGDYGKLGHGN--------CATHKQPERITGPFLGKTI 487
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K AG+ HSA + ++G++Y +G+ ++ + N P+ ++ L V CG HT
Sbjct: 488 KYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAEVGSVACGSSHT 547
Query: 301 CVLTSGGE-LYTWGSNENGCLGIG 323
V++ G+ ++++GS E+G LG G
Sbjct: 548 LVVSKDGKTVWSFGSGEHGKLGTG 571
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 16/210 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G +R+ P + + + ++ACG +HTL +++ G V++ G + G
Sbjct: 509 WGEGDHGRLGHGDSNARYVPTQVAGLAE--VGSVACGSSHTLVVSKDGKTVWSFGSGEHG 566
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG E +G P + L+ +Q + G S A+T GE+Y WG S LG G
Sbjct: 567 KLGTGE-LGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWG--SGAILGKG-S 622
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A ++ +P VE L+ + G +A+T +V +WG G+ G G S +
Sbjct: 623 ADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPIT- 681
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
P + LEGV ++ +AG HS
Sbjct: 682 -------RPLKVIGLEGVSIRQISAGTSHS 704
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 129/295 (43%), Gaps = 50/295 (16%)
Query: 40 AALWGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
A +WG+ +G+L LG S PV +F + + CG T + G V A G
Sbjct: 3329 AYMWGSDRHGQLAELGYSASV--PVQVESFS--IARKIICGQNCTFVIQSDGTVLACGEG 3384
Query: 99 DFGQLGI-------SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
+G+LG S ++ SL+ I+ L V S G HS A+ GE++ WG
Sbjct: 3385 SYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVG--SDG--HSLALAESGEVFSWGDGD 3440
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
G+LG G + P ++E L Q A GF+ S VT GK+ ++G G G+LG
Sbjct: 3441 FGKLGHGNPDRQ--RRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGL 3498
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKM 270
G + ++ P + LEG ++ A G H+AC+ +G V+ FG
Sbjct: 3499 GSVA---------NKKLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFG------- 3542
Query: 271 LFQEGNHARR---PSLISKLPYSEEVV---------CGGYHTCVLTSGGELYTWG 313
EG++ + + + LP E V CG + T LT G+++ G
Sbjct: 3543 ---EGDYGKLGLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCG 3594
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 145 YMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
YMWG + +GQL LG A+ +P +VE S ++ G + + G VL+ G
Sbjct: 3330 YMWGSDRHGQLAELGYSAS----VPVQVESFS--IARKIICGQNCTFVIQSDGTVLACGE 3383
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL---HSACIDENGRVY 260
G GRLG G + ++ +I L+G + A HS + E+G V+
Sbjct: 3384 GSYGRLGQGNSDDL---------HSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVF 3434
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+GD K+ + RRP I L + +V CG H+ V+TS G+L+T+G+ + G
Sbjct: 3435 SWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFG 3494
Query: 319 CLGIG 323
LG+G
Sbjct: 3495 KLGLG 3499
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG S ++ +E I+ +I G + + I DG + G+ S G+LG G
Sbjct: 3340 LAELGYSASVPVQVESFSIAR------KIICGQNCTFVIQSDGTVLACGEGSYGRLGQGN 3393
Query: 160 KAAKVIPIPTKVECLSGIFTKQAA--LGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + + + L G A +G + S+A+ G+V SWG G G+LGHG
Sbjct: 3394 --SDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGHGNPDR 3451
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ PR I+ L+ +V A GF HSA + +G+++ FG+ K+
Sbjct: 3452 ---------QRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVA 3502
Query: 277 HARRPSLISKLPYSE--EVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ + P + L +V CG HT CV T G ++T+G + G LG+G
Sbjct: 3503 NKKLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLG 3552
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G++G+LG G L +RP V A + +++ + G ++ LT G VY G
Sbjct: 560 FGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILG 619
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G ++ I P+ + L + +V IS G +H A+T + E++ WG NS GQ G G
Sbjct: 620 KGSADAIVNL--PMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTC 677
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ I P KV L G+ +Q + G S+A T
Sbjct: 678 SP-ITRPLKVIGLEGVSIRQISAGTSHSMAWTS 709
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3156 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3215
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3216 LGHGDN-ATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3274
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3275 SEGSA--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3330
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3331 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3381
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3382 NKKPALVIGLDAVFVNRVACGSSHS 3406
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 131/287 (45%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3103 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3162
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N +P + L+ K++ I+ G HS+AI+ GELY WG G+LG G
Sbjct: 3163 KLG-HGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3221
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3222 ATQLKP--KLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3274
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3275 ----SEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3330
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P I+ L V G H +T G++Y WG N++G G G
Sbjct: 3331 RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3377
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4310 WGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4369
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4370 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4427
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4428 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4484
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH + G VY +GD ++ +
Sbjct: 4485 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4537
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4538 RPRLVAALQGKHIVKVTCGSAHTLALST 4565
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4204 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPIQLA-GGEQSLFAVTPDGKLFATGYGSG 4261
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T DGE+Y WG+ +G+LG
Sbjct: 4262 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4320
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4321 GNRMS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4374
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4375 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4424
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S KLPY E V CG + LT G +YTWG + LG G
Sbjct: 4425 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4479
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4290 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMS--VADIACGS 4347
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4348 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4405
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4406 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4456
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4457 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4516
Query: 309 LYTWGSNENGCLGIG 323
+YTWG N+ G LG G
Sbjct: 4517 VYTWGDNDEGQLGDG 4531
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 126/253 (49%), Gaps = 20/253 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3085 GGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3143
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G ++ + P VE L + A G S A++
Sbjct: 3144 ALALTLDGKVFSWGEGEDGKLGHGNRS--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3201
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG ++ L P+L+ L G +V A G +
Sbjct: 3202 QGELYTWGLGEYGRLGHGDNATQL---------KPKLVTALHGRRVIQVACGSRDAQTLA 3252
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 3253 LTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3312
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3313 TWGKGDYYRLGHG 3325
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + + P + A + H + AL G AHTL LT G VYA G D+
Sbjct: 692 WGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDY 751
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + SL+PL I L + V ++ G S A+T +G+LY WGK S L ++
Sbjct: 752 GKLG-NGSCNSSLQPLLIECLPR-VQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVER 809
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ +P + L A+G +A++ G++ WG + ++
Sbjct: 810 NVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQI 858
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 20/249 (8%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A C G H L + Y+ G+ D +LG + L P +I L + V + G +
Sbjct: 621 AAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHAREL-PTKIESLVRRVQSVYCGCSY 679
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT+ G LY WG+ + G+LG G + +P V L ALG ++ +
Sbjct: 680 SAAITLRGNLYTWGRGTYGRLGHGNSDDQC--MPAMVMALKDHQVLDVALGSGDAHTLCL 737
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T GG V +WG G G+LG+G +S L P LI+ L V+ A + F S
Sbjct: 738 TRGGLVYAWGDGDYGKLGNGSCNSSL---------QPLLIECLPRVQRVFAGSQF--SLA 786
Query: 253 IDENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ G++Y +G + +++ + P LI+ L + V G H L+S GE
Sbjct: 787 LTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGE 846
Query: 309 LYTWGSNEN 317
++ WG N+N
Sbjct: 847 IFGWGRNDN 855
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 16/190 (8%)
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A+ + Y WG + +LG G A+ +PTK+E L + G S A+T
Sbjct: 628 HFLAVDSNHNAYSWGVGDSRRLGHGDCHAR--ELPTKIESLVR-RVQSVYCGCSYSAAIT 684
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G + +WG G GRLGHG S + P ++ L+ +V A +G H+
Sbjct: 685 LRGNLYTWGRGTYGRLGHGN---------SDDQCMPAMVMALKDHQVLDVALGSGDAHTL 735
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
C+ G VY +GD K+ N + +P LI LP + V G + LT G+LY+
Sbjct: 736 CLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQRVFAGSQFSLALTCEGQLYS 795
Query: 312 WGSNENGCLG 321
WG + CLG
Sbjct: 796 WG--KASCLG 803
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 16/224 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G +R P + + ++++ CG +++ +T G +Y G +G+
Sbjct: 641 WGVGDSRRLGHGDCHARELPTKIESLVRR-VQSVYCGCSYSAAITLRGNLYTWGRGTYGR 699
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + + + ++ +V+ ++ +G H+ +T G +Y WG G+LG G
Sbjct: 700 LGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSC 759
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
+ + P+ +ECL + ++ G + S+A+T G++ SWG LGH E ++ G
Sbjct: 760 NSSLQPL--LIECLPRV--QRVFAGSQFSLALTCEGQLYSWGKASC--LGHQLVERNVQG 813
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRLI L+ ++ A G H + NG ++ +G
Sbjct: 814 C------SVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWG 851
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ +WG N QLG G K +KV +PT + +S + A G + V+ GKV + G
Sbjct: 3047 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGE 3104
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G ++ P + L VK A +G H+ + +G+V+
Sbjct: 3105 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3155
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ + +P L+ L + ++ CG H+ ++S GELYTWG E G
Sbjct: 3156 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3215
Query: 320 LGIG 323
LG G
Sbjct: 3216 LGHG 3219
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 91/238 (38%), Gaps = 69/238 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS---------------------------- 175
+Y WG N GQLG G + ++ I PT E LS
Sbjct: 4201 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATGY 4258
Query: 176 ------------------------GIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
+F K+ A+ G + +A+T G+V +WG G G+L
Sbjct: 4259 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKL 4318
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4319 GHGNRMSY---------DRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4369
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4370 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4427
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 126/246 (51%), Gaps = 21/246 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ +G VY+ G D G+LG + Y EP I+ K+VVQI+ G +
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHGDAT-YLEEPALITTFSGKQTGKQVVQIACGSTY 513
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+A+T DGELY WG+ + G+LG G +++ + P V L G A G Q++AV
Sbjct: 514 SAAVTADGELYTWGRGNYGRLGHG--SSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAV 571
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+L+++L+ + + G S
Sbjct: 572 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 622
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + ++ G H LT GE++
Sbjct: 623 LTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVH 682
Query: 311 TWGSNE 316
+WGSN+
Sbjct: 683 SWGSND 688
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 136/271 (50%), Gaps = 23/271 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 3033 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3093 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 3150
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3151 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3207
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3208 ------RKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTTT 3257
Query: 279 --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3258 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3288
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 4006 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4065
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4066 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4123
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4124 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4180
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4181 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4233
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4234 RPRLVAALQGKKINRVACGSAHT 4256
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P SA + +K +A GG H + LT G V++ G D
Sbjct: 2979 GEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3038
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3039 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGD 3097
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3098 NTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3151
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3152 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3206
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3207 VRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3254
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 123/273 (45%), Gaps = 33/273 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C A + + C L L+ +G VY +L P+ I GL
Sbjct: 393 PIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYK-----------STTLAPMLIHGL 441
Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ GE+Y WG G+LG G A + P + SG
Sbjct: 442 SSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGD--ATYLEEPALITTFSGKQ 499
Query: 179 T----KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
T Q A G S AVT G++ +WG G GRLGHG + TP L+
Sbjct: 500 TGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDV---------TTPMLVTA 550
Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
L+G KV A +G + + ENG+V+ +GD K+ + + P L+ KL +
Sbjct: 551 LKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDI 610
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG + LT G++YTWG +N LG G
Sbjct: 611 VKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 643
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3966 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 4024
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT GEL+ WGK G+LG G ++ P V+
Sbjct: 4025 PRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKP--KLVDA 4082
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4083 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG---------SDGCKVPMK 4133
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4134 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4193
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4194 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4227
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 118/238 (49%), Gaps = 16/238 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2923 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 2982
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + I IP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 2983 NGRLGLGLSSG-TIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3041
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3042 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L +V CG T LT G +++WG + G LG G
Sbjct: 3093 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3150
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G +YA G G+LG+ + G P +IS L VV+ + +G H
Sbjct: 2961 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRH 3020
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3021 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3078
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+L+K L G +V A G +
Sbjct: 3079 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3129
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3130 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3189
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3190 TWGKGDYFRLGHG 3202
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 23/230 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLK---ALACGGAHTLFLTETGCVYATGLN 98
WG GD GRLG G P + + F K + K +ACG ++ +T G +Y G
Sbjct: 470 WGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRG 529
Query: 99 DFGQL--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNG 153
++G+L G SE++ P+ ++ LK ++VV ++ +G + A+T +G+++ WG G
Sbjct: 530 NYGRLGHGSSEDVTT---PMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYG 586
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+LG G + P VE L + + G + SVA+T G+V +WG G + RLGHG
Sbjct: 587 KLGRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT 644
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ + P+L+ L+G KV A G H + + G V+ +G
Sbjct: 645 DEHV---------RYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 123/254 (48%), Gaps = 22/254 (8%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ +KK V +++G
Sbjct: 3935 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGK 3992
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GE+Y WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 3993 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 4050
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L+ L+G +V A +G +
Sbjct: 4051 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 4101
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
C+ ++ V+ +GD K+ + + P I L +V CG + LT G +
Sbjct: 4102 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4161
Query: 310 YTWGSNENGCLGIG 323
YTWG + LG G
Sbjct: 4162 YTWGKGDYHRLGHG 4175
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 6/171 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ +A + + +ACG A TL +TE G V++ G D+
Sbjct: 526 WGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 585
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + G L ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 586 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 645
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ + P ++ L G A+G +A+T G+V SWG+ + +L H
Sbjct: 646 --EHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGS--NDKLQH 692
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA ++ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2915 SAASIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2972
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GK+ + G +GRLG G S + R S + ++K KV + + G H+ +
Sbjct: 2973 GKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVK-----KVAVHSGG-RHAMALTV 3026
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+WG
Sbjct: 3027 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3086
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3087 LGEYGRLGHG 3096
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 97/239 (40%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
G +Y WG N GQLG G + AKV +P PT+
Sbjct: 3895 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3953
Query: 171 --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3954 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4013
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSACI +G ++ +G
Sbjct: 4014 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4064
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4065 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG 4123
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 580 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 639
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + L+ K+VV I+ G H A+T +GE++ WG N Q L
Sbjct: 640 LGHGTDEHVRY---PKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDTL 696
Query: 156 GLGKKAAKVIP 166
KK K +P
Sbjct: 697 FPNKKQPKALP 707
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4164 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4223
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4224 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4258
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 67/177 (37%), Gaps = 47/177 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3893 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYAT 3952
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 3953 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4012
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
K+ + RP +I L E ++ GG H+ +T+ GEL+TWG G LG G
Sbjct: 4013 KLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHG 4069
>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
Length = 1280
Score = 112 bits (280), Expect = 3e-22, Method: Composition-based stats.
Identities = 80/282 (28%), Positives = 138/282 (48%), Gaps = 20/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFG 101
WG + G+LG+G++ + P +KA++ G A H + L+E G V+ G ND G
Sbjct: 107 WGANENGQLGIGTITNVNAPAQVPGLS--GIKAISGGLAYHGMALSENGTVWTWGKNDNG 164
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG I + P+ ++GL +V I+ G ++S A+ DG ++ WG N +G+LG G
Sbjct: 165 ELGNGTTIQQN-SPVLVAGLS-DVTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTT 222
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P+ +V L+ + A G S+A+ G V +WG G LG G
Sbjct: 223 DRHVPV--QVAGLTDVMA--IAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTR------- 271
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T P ++ L+ + V +A G+ HS +D G V+ +GD + ++ + P
Sbjct: 272 --THRTRPVQVRNLQHI-VAVAGGGY-HSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIP 327
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + E+ GG+H+ + G ++ WG N G +G G
Sbjct: 328 VPVPGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDG 369
Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats.
Identities = 89/281 (31%), Positives = 135/281 (48%), Gaps = 20/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ +R PV+ + + + G ++ L + G V+ G N+ GQ
Sbjct: 57 WGYGDRGQLGDGTWNTRTTPVMAKNL--NHVIDIHSGVRSSMALRQDGTVWTWGANENGQ 114
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LGI I P ++ GL + IS G +H A++ +G ++ WGKN NG+LG G
Sbjct: 115 LGIG-TITNVNAPAQVPGLSG-IKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTI 172
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V LS + T AA G+ S+A+ G V +WG GSG LG G
Sbjct: 173 QQNSPV--LVAGLSDV-TAIAAGGY-YSLALKSDGTVWAWGVNGSGELGDGT-------- 220
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T + P + L V AAG HS I ++G V+ +G+ + H RP
Sbjct: 221 -TTDRHVPVQVAGL--TDVMAIAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTRTHRTRP 277
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ L + V GGYH+ + G +++WG N LG+
Sbjct: 278 VQVRNLQHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGL 318
Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats.
Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 16/248 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ G HT L +G VY+ G D GQLG P+ L V+ I +G S
Sbjct: 38 IVAGYYHTASLVSSGEVYSWGYGDRGQLG-DGTWNTRTTPVMAKNL-NHVIDIHSGVRSS 95
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG ++ WG N NGQLG+G + P +V LSGI L + +A++
Sbjct: 96 MALRQDGTVWTWGANENGQLGIG--TITNVNAPAQVPGLSGIKAISGGLAY-HGMALSEN 152
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG +G LG+G + + +P L+ L V IAA G+ +S +
Sbjct: 153 GTVWTWGKNDNGELGNGT---------TIQQNSPVLVAGLSDV-TAIAAGGY-YSLALKS 201
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G V+ +G ++ P ++ L + GG H+ + G ++ WG+N
Sbjct: 202 DGTVWAWGVNGSGELGDGTTTDRHVPVQVAGLTDVMAIAAGGSHSLAIKQDGTVWAWGNN 261
Query: 316 ENGCLGIG 323
G LG G
Sbjct: 262 TYGTLGDG 269
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG G+ R PV + + A+A GG+H+L + + G V+A G N +G
Sbjct: 208 WGVNGSGELGDGTTTDRHVPVQVAGLT--DVMAIAAGGSHSLAIKQDGTVWAWGNNTYGT 265
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ L + +V ++ G +HS A+ G ++ WG NS QLGL A+
Sbjct: 266 LGDGTRT-HRTRPVQVRNL-QHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNAS 323
Query: 163 KVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+IP+P + GI ++ + G SVA+ G V WG G++G G ++ G
Sbjct: 324 SLIPVP-----VPGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRG 376
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+I GY+H++++ GE+Y WG GQLG G + P+ K L+ + + G
Sbjct: 37 KIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAK--NLNHVIDIHS--GV 92
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A+ G V +WGA +G+LG G +++ P + L G+K I+
Sbjct: 93 RSSMALRQDGTVWTWGANENGQLGIGTITNV---------NAPAQVPGLSGIKA-ISGGL 142
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
H + ENG V+ +G ++ P L++ L + GGY++ L S
Sbjct: 143 AYHGMALSENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSDVTAIAAGGYYSLALKSD 202
Query: 307 GELYTWGSNENGCLGIG 323
G ++ WG N +G LG G
Sbjct: 203 GTVWAWGVNGSGELGDG 219
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 81 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 140 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQ-- 197
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 198 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLG---------NSG 248
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TINQPIPRRV 203
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + ++G VY++G ++ + P ++ L
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu
rubripes]
Length = 4822
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 129/266 (48%), Gaps = 23/266 (8%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P++ + + LA G H L L+ G V++ G D G+LG + Y EP I+
Sbjct: 470 PMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDAT-YLEEPTMIA 528
Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
K VV I+ G +S+ IT+DGELY WG+ + G+LG G + P+ V L
Sbjct: 529 AFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPM--LVTAL 586
Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G+ A G Q++AVT G+V SWG G G+LG G S TP+L+
Sbjct: 587 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 637
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
++L+ + + G S + ++G+VY +G ++ H R P L+ L +
Sbjct: 638 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 697
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNE 316
+V G H LT GE+++WGSN+
Sbjct: 698 VDVAVGSTHCLALTDDGEVHSWGSND 723
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 4051 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4110
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4111 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4169 -GSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4225
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4226 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4278
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4279 RPRLVAALQGKKINRVACGSAHT 4301
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 3057 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3116
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3117 LGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 3174
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3175 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3232 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTT 3281
Query: 279 --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3282 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3312
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 135/289 (46%), Gaps = 22/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H + LT G V++ G D
Sbjct: 3003 GEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3061
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3062 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3120
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
A ++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3121 DNATQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3175
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3176 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3229
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3230 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3278
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 121/243 (49%), Gaps = 26/243 (10%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYM 146
V+ GLND QLG G +++ + VVQ++ G A+TV+G++Y
Sbjct: 2947 VFVWGLNDKDQLG-----GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 3001
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G+ +NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G
Sbjct: 3002 CGEATNGRLGLGLSSG-TIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3060
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGH F R + PRLI+ L+ +++ A G HSA I +G +Y +G
Sbjct: 3061 DDGKLGH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGL 3111
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCL 320
++ + RP L+ L +V CG T LT G +++WG + G L
Sbjct: 3112 GEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 3171
Query: 321 GIG 323
G G
Sbjct: 3172 GRG 3174
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 114/254 (44%), Gaps = 17/254 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G + G+LG N P I L+ EVV I+ G
Sbjct: 4031 AVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESLRGVEVVDIAAGGA 4089
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
HS+ IT GEL+ WGK G+LG G ++ P V+ L G + G Q++
Sbjct: 4090 HSACITASGELFTWGKGRYGRLGHGDSEDQLKP--KLVDALQGHRVIDVACGSGDAQTLC 4147
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I L G+ V G S
Sbjct: 4148 LTDDDMVWSWGDGDYGKLGRGG---------SDGCKIPMKIDSLTGLGVTKVECGSQFSV 4198
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ +H RRP + L + + G H T GE+
Sbjct: 4199 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4258
Query: 310 YTWGSNENGCLGIG 323
YTWG N+ G LG G
Sbjct: 4259 YTWGDNDEGQLGDG 4272
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 31/288 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + +AF KH + +ACG ++ +T G +Y G
Sbjct: 505 WGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVH-IACGSTYSAVITIDGELYTWGR 563
Query: 98 NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G+L G SE+ + + GLK V +G + A+T +G+++ WG G+L
Sbjct: 564 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 623
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P VE L + + G + SVA+T G+V +WG G + RLGHG +
Sbjct: 624 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 681
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-FQE 274
+ P+L+ L+G KV A G H + ++G V+ +G DK+ F
Sbjct: 682 HV---------RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSN--DKLQHFDT 730
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ ++P + L + + CG G+ + W S +G+
Sbjct: 731 LSNKKQPKALPGLKHIVGISCG---------PGQSFAWSSCSEWSVGL 769
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + + + C L L+ +G VY +L P+ I L
Sbjct: 428 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK-----------STTLAPMLIHSL 476
Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ +GE++ WG G+LG G A + PT + +G
Sbjct: 477 SSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD--ATYLEEPTMIAAFNG-- 532
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S +T G++ +WG G GRLGHG S + TP L
Sbjct: 533 -KQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGS---------SEDQTTPML 582
Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+ L+G+KV A +G + + ENG+V+ +GD K+ + + P L+ KL
Sbjct: 583 VTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 642
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++YTWG +N LG G
Sbjct: 643 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 678
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 121/253 (47%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G +YA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2985 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRH 3044
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3045 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3102
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG ++ L P+L+K L G +V A G +
Sbjct: 3103 SGELYSWGLGEYGRLGHGDNATQL---------RPKLVKVLLGHRVIQVACGSRDAQTLA 3153
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3154 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3213
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3214 TWGKGDYFRLGHG 3226
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 22/254 (8%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ ++K V +++G
Sbjct: 3980 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 4037
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GE+Y WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 4038 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 4095
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L+ L+G +V A +G +
Sbjct: 4096 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 4146
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
C+ ++ V+ +GD K+ + + P I L +V CG + LT G +
Sbjct: 4147 CLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAV 4206
Query: 310 YTWGSNENGCLGIG 323
YTWG + LG G
Sbjct: 4207 YTWGKGDYHRLGHG 4220
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2939 SAGTIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2996
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GK+ + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 2997 GKIYACGEATNGRLGLGLSSGTIPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3048
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+
Sbjct: 3049 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYS 3108
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3109 WGLGEYGRLGHG 3120
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
G +Y WG N GQLG G + AKV +P PT+
Sbjct: 3940 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3998
Query: 171 --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+E + +F ++ A+ G + +A++ G+V SWG G+
Sbjct: 3999 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4058
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSACI +G ++ +G
Sbjct: 4059 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4109
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4110 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG 4168
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4209 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4268
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4269 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4303
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 18/287 (6%)
Query: 43 WGNGDYGRLGLGSLESRW--RPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLND 99
WGN G LGLG +E + P FE +++K++ACG HTL +TE G +YA G ND
Sbjct: 4 WGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSND 63
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
FGQLG + G + +I G++ V+ ++ G HS A+ G+LY WG +S GQLGL
Sbjct: 64 FGQLG---HDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGL- 119
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + P V+ L+ + Q + G++ +A+T G++ +WG+ + +
Sbjct: 120 ETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS--------NEFGQLG 171
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
L + P L+ L G+ + A G HS + ++G V+ +G ++
Sbjct: 172 LGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSL 231
Query: 279 RRPSLISKLPYSE-EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIG 323
P+ + + + + + GG V LT G ++T G+ G LG G
Sbjct: 232 SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHG 278
Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 91/282 (32%), Positives = 133/282 (47%), Gaps = 16/282 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ D+G+LG ++ + + E + ++ACG AH++ L E G +Y G + GQL
Sbjct: 60 GSNDFGQLGHDGCRTKLQKI--PGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQL 117
Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + G +P + L + VQIS GY H A+T GELY WG N GQLGLG
Sbjct: 118 GLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPG 177
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V PT V L G+ A G S V+ G V WG G+LG ++S+
Sbjct: 178 NVSK-PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSL----- 231
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+P +K + VKVK A G S + +G V+ G ++ ++ P
Sbjct: 232 ----SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPR 287
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
+ +L S +V CG HT L S G +Y++G G LG
Sbjct: 288 KVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLG 329
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 75/245 (30%), Positives = 122/245 (49%), Gaps = 14/245 (5%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGL + E +++P + L ++CG H + LT G +Y G N+FG
Sbjct: 109 WGSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFG 168
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ G +P ++ L + I+ G +HS ++ G ++ WGKN GQLG+ +
Sbjct: 169 QLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQ 228
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ + P +++ + + K A G + SV +T G V + GAG G+LGHG S+
Sbjct: 229 TS--LSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSN---- 282
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E PR + EL G V G H+ + GRVY FG +V ++ + ++
Sbjct: 283 -----EIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSN 337
Query: 280 RPSLI 284
P L+
Sbjct: 338 TPQLV 342
Score = 73.9 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 19/179 (10%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKV---ECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+Y WG NG+LGLG I P ++ E ++ I K A G ++AVT G++ +
Sbjct: 1 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNI--KSVACGNNHTLAVTEDGQLYA 58
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
G+ G+LGH + L + I +E + + A G HS ++E G++Y
Sbjct: 59 CGSNDFGQLGHDGCRTKL-----------QKIPGVESLVMTSVACGEAHSMALNEWGQLY 107
Query: 261 IFGDRAVDKMLFQEGNHAR-RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNE 316
+G + ++ + + +P ++ L ++ CG H LT+ GELYTWGSNE
Sbjct: 108 TWGSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNE 166
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 22/254 (8%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
K ++A+ CG + L+E G VY + L + + + V Q++
Sbjct: 74 KEKIEAVGCGDDEVILLSEKGSVYRVDVTQ----------ALYLPRMLEAFCRIPVSQVA 123
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G H+ A+T +G++Y WG+NS GQLGLGKK I P V LSG+ Q + G + S
Sbjct: 124 CGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCS-ISSPQCVRSLSGMPLVQVSAGGDHS 182
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A++ G V WG G+LG G S TP + L K + G H
Sbjct: 183 FALSVSGSVFGWGRNDCGQLGLGD---------SQDRCTPTSVDSLNLKKTTSISCGKDH 233
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGG 307
+A + ++G V+ FG ++ + RP L+++L + CG YHT VL
Sbjct: 234 TAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENN 293
Query: 308 ELYTWGSNENGCLG 321
++Y++G N+ LG
Sbjct: 294 KIYSFGCNDQNQLG 307
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG + R P + +++CG HT LT+ G V+ G FGQ
Sbjct: 194 WGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQ 253
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L +V +I+ G +H+ + + ++Y +G N QLG +
Sbjct: 254 LGHNSSRN-ELRPRLVAELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSNDS 312
Query: 162 AKVIPIPT 169
+P+P
Sbjct: 313 HPSVPLPV 320
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 51/210 (24%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
++ + P + AF + + +ACG HT+ LT+ G VY G N GQLG+ + P
Sbjct: 103 QALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQ 162
Query: 117 RISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP------- 168
+ L +VQ+S G HS A++V G ++ WG+N GQLGLG + P
Sbjct: 163 CVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLK 222
Query: 169 --TKVEC---LSGIFTK--------------------------------------QAALG 185
T + C + I TK + A G
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACG 282
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
++ + K+ S+G +LG +S
Sbjct: 283 RYHTLVLQENNKIYSFGCNDQNQLGRSNDS 312
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
K+ + G G + ++ S+ + + Y PR+++ + V A G H+ + +
Sbjct: 76 KIEAVGCGDDEVILLSEKGSVYRVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKE 135
Query: 257 GRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTW 312
G+VY +G + ++ L ++G P + L P + V GG H+ L+ G ++ W
Sbjct: 136 GQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQ-VSAGGDHSFALSVSGSVFGW 194
Query: 313 GSNENGCLGIG 323
G N+ G LG+G
Sbjct: 195 GRNDCGQLGLG 205
>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
Length = 531
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 128/270 (47%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + ++
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLG---------NNVNQ 221
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 222 LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPTHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NVNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PTHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPTHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T + C +F
Sbjct: 317 -SVVLPHLTHLSCTDDVF 333
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 120/251 (47%), Gaps = 19/251 (7%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
GG H L L+ G VY+ G D G+LG N P I L+ KEVV ++ G HS+
Sbjct: 676 GGKHCLALSAEGEVYSWGEGDDGKLGHG-NKSSCERPRVIESLRGKEVVDVACGGAHSAC 734
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
IT GELY WGK G+LG G ++ P KVE LSG + A G Q++ VT
Sbjct: 735 ITASGELYTWGKGRYGRLGHGDSDDQLRP--KKVEALSGWRVRCVACGSGDAQTLCVTDD 792
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
V SWG G G+LG G LR + L+G+ V G S +
Sbjct: 793 DCVWSWGDGDYGKLGRGGSDGCKVPLR---------VDLLQGMGVIRVECGSQFSVALTA 843
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTW 312
+G VY +G ++ +H RRP ++ L ++V+C G H T GE+YTW
Sbjct: 844 SGSVYTWGKGDYHRLGHGTDDHVRRPKRVAAL-QGKKVICIAVGSLHCVACTDTGEVYTW 902
Query: 313 GSNENGCLGIG 323
G N+ G LG G
Sbjct: 903 GDNDEGQLGDG 913
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP V + + +ACGGAH+ +T +G +Y G +G+
Sbjct: 692 WGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGR 751
Query: 103 LGISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P ++ SG + V +G + +T D ++ WG G+LG G
Sbjct: 752 LGHGDS-DDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGG 810
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P+ +V+ L G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 811 SDGCKVPL--RVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHV-- 866
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G KV A G LH + G VY +GD ++ N
Sbjct: 867 -------RRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIH 919
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
+P L++ L + V CG HT
Sbjct: 920 KPRLVAALQGKKINRVSCGSAHT 942
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 138/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL-ACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P+ C A +L+ + GG TLF +T G VYATG
Sbjct: 586 WGHNHRGQLGGVEGAKVKLPMPCEALS--ALRPIQVVGGEQTLFAVTADGKVYATGYGAG 643
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE L+ +KK VV ++G H A++ +GE+Y WG+ +G+LG
Sbjct: 644 GRLGIGGTDSVSCPTLLESLQHVFIKKVVV--NSGGKHCLALSAEGEVYSWGEGDDGKLG 701
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G K++ P +E L G A G S +T G++ +WG G GRLGHG
Sbjct: 702 HGNKSS--CERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGD--- 756
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+ ++ L G +V+ A +G + C+ ++ V+ +GD K+
Sbjct: 757 ------SDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGG 810
Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P + L V CG + LT+ G +YTWG + LG G
Sbjct: 811 SDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHG 861
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 89/186 (47%), Gaps = 15/186 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G + WG N GQLG G + AKV +P E LS + Q G + AVT GKV +
Sbjct: 581 GTILGWGHNHRGQLG-GVEGAKV-KLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYAT 638
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRV 259
G G GRLG G S+ P L++ L+ V +K + +G H + G V
Sbjct: 639 GYGAGGRLGIGGTDSV---------SCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEV 689
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ + RP +I L E +V CGG H+ +T+ GELYTWG
Sbjct: 690 YSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRY 749
Query: 318 GCLGIG 323
G LG G
Sbjct: 750 GRLGHG 755
>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
Length = 355
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIATVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 283 KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKVCV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 843 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 902
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 903 LGHGDN-ATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 961
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 962 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 1017
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 1018 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 1068
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 1069 NKKPALVIGLDAVFVNRVACGSSHS 1093
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 130/287 (45%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 790 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 849
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 850 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 908
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 909 ATQLKP--KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 961
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 962 ----SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 1017
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P I L V G H +T G++Y WG N++G G G
Sbjct: 1018 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 1064
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 1908 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 1967
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 1968 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 2025
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 2026 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 2082
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH ++G VY +GD ++ +
Sbjct: 2083 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 2135
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 2136 RPRLVAALQGKHIVKVTCGSAHTLALST 2163
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 1802 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 1859
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 1860 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 1918
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 1919 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 1972
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 1973 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 2022
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S KLPY E V CG + LT G +YTWG + LG G
Sbjct: 2023 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 2077
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 1888 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 1945
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 1946 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 2003
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 2004 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 2054
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 2055 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 2114
Query: 309 LYTWGSNENGCLGIG 323
+YTWG N+ G LG G
Sbjct: 2115 VYTWGDNDEGQLGDG 2129
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 125/253 (49%), Gaps = 20/253 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 772 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 830
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 831 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 888
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG ++ L P+L+ L G +V A G +
Sbjct: 889 QGELYTWGLGEYGRLGHGDNATQL---------KPKLVTALAGRRVVQVACGSRDAQTLA 939
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 940 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 999
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 1000 TWGKGDYYRLGHG 1012
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ +WG N QLG G K +KV +PT + +S + A G + V+ GKV + G
Sbjct: 734 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGE 791
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G ++ P + L VK A +G H+ + +G+V+
Sbjct: 792 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 842
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ +P L+ L + +V CG H+ ++S GELYTWG E G
Sbjct: 843 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 902
Query: 320 LGIG 323
LG G
Sbjct: 903 LGHG 906
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 89/238 (37%), Gaps = 69/238 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 1799 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 1856
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 1857 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 1916
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 1917 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 1967
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 1968 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 2025
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG + S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 168
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 278 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VRSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPIPRRV 174
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + + G VY++G ++ + P ++ L
Sbjct: 175 TGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 234
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 137/293 (46%), Gaps = 29/293 (9%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LG+G +E W+P L+ +ACG HTLFLT G VY
Sbjct: 6 WGNASHGQLGMGGIEDEQILIPSQIPWKP-------DAPLRQIACGHRHTLFLTANGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN 152
A G ND QLG N+ + PL I L+ VV I+ G HS A+T G++ WG N
Sbjct: 59 ACGNNDQAQLG--HNLP-TKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG + +I +P + L Q A G S+A+T G++ SWG+ G+LG
Sbjct: 116 GQLGQSTDQS-IIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVK 174
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ S Y RL L G+ + A G HS I ++ V+ FG ++
Sbjct: 175 PPQEL-----SHCNYPLRLTT-LLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGL 228
Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 229 NDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHG 281
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 131/283 (46%), Gaps = 16/283 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN D +LG +L ++ RP++ + + + A+ACG H++ LTE G V + G ND GQL
Sbjct: 61 GNNDQAQLG-HNLPTK-RPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQL 118
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GKKA 161
G S + P I L K VVQI+ G +HS A+T GELY WG N GQLG+ +
Sbjct: 119 GQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQE 178
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G S ++ V +G G+LG ES
Sbjct: 179 LSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDES------ 232
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P +K L + V+ A G S + G V+ G ++ + P
Sbjct: 233 ---NRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEMLP 289
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
++ +L S +V CG HT L S G +Y +G +G LG
Sbjct: 290 RMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLG 332
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 22/187 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+L+ WG S+GQLG+G + I IP+++ +Q A G ++ +T GKV + G
Sbjct: 2 DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+LGH + P LI EL+ V A G HS + E G+V +
Sbjct: 62 NNDQAQLGHNLPTK-----------RPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSW 110
Query: 263 GD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD ++ D+ + + R SL+SK + ++ CG H+ LTS GELY+WGSN
Sbjct: 111 GDNDCGQLGQSTDQSIIELPKIIR--SLVSK--HVVQIACGNNHSLALTSCGELYSWGSN 166
Query: 316 ENGCLGI 322
G LG+
Sbjct: 167 IYGQLGV 173
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 43 WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ + P+ + L +ACGG H+ ++++ V+ G N+
Sbjct: 163 WGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNN 222
Query: 100 FGQLGISE--NIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG+++ N Y L+ LR G++ ++ G S +T +G ++ G + GQL
Sbjct: 223 CGQLGLNDESNRAYPTQLKTLRTLGVRF----VACGDEFSVFLTNEGGVFTCGAGTYGQL 278
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQE 214
G G +++P V L G Q A G ++A V G+V +G G SG+LG+
Sbjct: 279 GHGSNTNEMLP--RMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRST 336
Query: 215 SSI 217
+S+
Sbjct: 337 NSV 339
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 218 FGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG N L + + + + Q++ G H+ A+ G +Y +G S+GQ LG ++
Sbjct: 278 LGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ--LGNRS 335
Query: 162 AKVIPIPTKV 171
+ +P +V
Sbjct: 336 TNSVTLPQEV 345
>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
jacchus]
Length = 1006
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 131/255 (51%), Gaps = 10/255 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P A + ++CG H+L + G V+A G GQLGI E + P +I+ L
Sbjct: 66 PEPVQALKTLKFNLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTL 125
Query: 122 K-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+ + P +V L GI
Sbjct: 126 TGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQAS-PQRVRSLEGIPVA 184
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
Q A G S A++ G WG+ +G+L ++ G P I L+ + V
Sbjct: 185 QVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNVQVQSNKPLSIGALKNLGV 238
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YSEEVVCGGYH 299
+ G H+A + ++G+V+ FGD + ++ + R P ++ ++ ++ CGG H
Sbjct: 239 IYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNPTPKKRGPQIVERIDGLVSQIDCGGDH 298
Query: 300 TCV-LTSGGELYTWG 313
T + + G++ ++G
Sbjct: 299 TIAYVHTTGQVVSFG 313
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 124/252 (49%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLR-ISGLKKEVVQISTGYHH 134
A G H L L V++ G N GQLG G EP++ + LK +V S G H
Sbjct: 29 ASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNLV--SCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+GI Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEINFTPKKITTLTGIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S S+ +P+ ++ LEG+ V AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKELS--------SQASPQRVRSLEGIPVAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P I L + CG HT VL+ G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNSSGQLG 269
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + + P R+ L+ V Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L + +V P + L + + G E + ++ GKV ++G SG+LG+
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYNP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P++++ ++G+ +I G A + G+V FG
Sbjct: 273 TPKKRG---------PQIVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G H+ + + ++ G+NS GQ LG++ A +P V+ L + +
Sbjct: 24 ELLQAASGERHALLLLTNSSVHSCGENSRGQ--LGRRGAPRGDLPEPVQALKTLKFNLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L G+K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------NFTPKKITTLTGIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ L +E + P + L P + +V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVA-QVAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 8/170 (4%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG L S+ P + E + +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL I LK V+ IS G H++ ++ DG+++ +G NS+GQLG
Sbjct: 212 QLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYN 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSG 207
K P VE + G+ + Q G + ++A V G+V+S+G G S
Sbjct: 272 PTPKKR--GPQIVERIDGLVS-QIDCGGDHTIAYVHTTGQVVSFGHGPSD 318
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3954 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4013
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4014 LGHSDSED-QLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4071
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4072 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4128
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4129 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4181
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4182 RPRLVAALQGKKVNRVACGSAHT 4204
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTLPLE-EPKVISAFSGKQGGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 122/275 (44%), Gaps = 37/275 (13%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TLPLEEPKVISAFSG 547
Query: 177 I----FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
A G S A+T G++ +WG G GRLGHG S E P L+
Sbjct: 548 KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIPMLV 598
Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3914 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3972
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 3973 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEV 4030
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4031 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4081
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4082 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4141
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4142 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4175
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3848 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPIQLIGGEQTLFAVTADGKLYATGYGAG 3905
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3906 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3963
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3964 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4018
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4019 ------SEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4072
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4073 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4123
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 118/242 (48%), Gaps = 19/242 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TW 312
TW
Sbjct: 3229 TW 3230
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G L S + PR I L VK A +G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL 3063
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3124 WGLGEYGRLGHG 3135
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++ IP +E L+G Q G + S+A+T G V +W
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3843 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYATG 3901
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3902 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3961
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3962 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4012
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4013 RLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4071
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
+ K P PT L G+ TK A G QS A
Sbjct: 747 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 776
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4112 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4171
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4172 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4206
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3841 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYAT 3900
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 3901 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3960
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 3961 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4015
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 32/277 (11%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G G+LGLG+ +S + P S +KAL+CGG+H+LF+TE G +YATG G
Sbjct: 102 VWGRGFSGQLGLGTNKSHFTPQPLSF--PMPVKALSCGGSHSLFITEDGRLYATGRGKEG 159
Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG S+ S +++ V G S T G+++ +G + GQLGLG +
Sbjct: 160 QLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLG-Q 218
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+ P +V L+G + A G + AVT GK+ +WG G SG+LG+G +
Sbjct: 219 FARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDV--- 275
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACID---------------ENGRVYIFGD 264
P L++EL+ ++V+ A G H+ A ID E+G V++ G
Sbjct: 276 ------SLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMG- 328
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHT 300
R + L + G+ P++ +P ++V CG HT
Sbjct: 329 RGREGQLGR-GDIVESPAVYRSVPLQVQQVACGTSHT 364
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 20/228 (8%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G LG+ E + L P +++ + V +S G+ H++AI G++++WG+ +GQLGLG
Sbjct: 59 WGLLGLGETLDV-LYPQKVN--LEGVTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGT 115
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P P + K + G S+ +T G++ + G G G+LG G + S+L
Sbjct: 116 NKSHFTPQPLSFP----MPVKALSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQESVL- 170
Query: 220 FLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNH 277
+P ++ EG +VK A G S E+G+V+ FG ++ L Q +
Sbjct: 171 --------SPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARY 222
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A P ++ L + G YH +TS G+LYTWG +G LG G
Sbjct: 223 AMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNG 270
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 135/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3352 WGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3411
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L VVQ++ G + +T +G ++ WG G+LG G
Sbjct: 3412 LGHGDNC-TQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG- 3469
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +VE L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3470 -GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHV-- 3526
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P I+ L G KV A G LH + ++G+VY +GD D GN
Sbjct: 3527 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN--DHGQQGSGNTIV 3577
Query: 279 -RRPSLISKLP--YSEEVVCGGYHT 300
++PSL+ L + V CG H+
Sbjct: 3578 NKKPSLVLGLDGIFVNRVACGSSHS 3602
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ +S RP + A + +ACG AH+ +T G V G +G+
Sbjct: 4488 WGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGR 4547
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4548 LGHGDSED-QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4605
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4606 -GSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHV-- 4662
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH + G V+ +GD ++ + +
Sbjct: 4663 -------RRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQ 4715
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L+ L + +V+CG HT L++
Sbjct: 4716 RPRLVQSLQGKHIVKVICGSAHTLALST 4743
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 130/287 (45%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H + LT G V++ G + G
Sbjct: 3299 GEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3358
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3359 KLGHGNRLTLE-KPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3417
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L+ Q A G Q++ +T G V SWG G G+LG G
Sbjct: 3418 CTQLKP--KLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGG----- 3470
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P ++ L GV V G S + ++G V+ +G ++ H
Sbjct: 3471 ----SEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHV 3526
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+ I L + V G H +T G++Y WG N++G G G
Sbjct: 3527 RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG 3573
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 141/291 (48%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A +A GG TL+ +T G +YATG
Sbjct: 4382 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4439
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI + +E L+ +KK V +++G H A++ DGE++ WG+ +G+LG
Sbjct: 4440 GRLGIGGTDSVTTPTLVESLQHVMIKK--VAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4497
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P +E LSGI A G S +T G VL+WG G GRLGHG
Sbjct: 4498 HGNRDS--YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD--- 4552
Query: 217 ILGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4553 ------SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4606
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4607 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4657
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 122/275 (44%), Gaps = 21/275 (7%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+S P + + + +K +A GG H L L+ G V++ G + G+LG Y
Sbjct: 4448 DSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRP 4507
Query: 115 PL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L +SG+ V+ I+ G HS+ IT G + WGK G+LG G ++ P VE
Sbjct: 4508 KLIEALSGIG--VIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQP--KLVE 4563
Query: 173 CLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4564 ALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG---------SDGCKVPM 4614
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
I+ L G+ V G S + +G VY +G ++ +H RRP ++ L
Sbjct: 4615 KIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGK 4674
Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + G H + GGE++TWG N+ G LG G
Sbjct: 4675 KIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDG 4709
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 140/292 (47%), Gaps = 25/292 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P S + LK + GG+ +LF+ ++ G +YA G
Sbjct: 3245 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 3301
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ N P ++ L + VV+ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 3302 TNGRLGLGHNNNVP-TPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3360
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3361 GHGNRL--TLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3416
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
+ ++ P+L+ L +V A G + C+ E G V+ +GD K+
Sbjct: 3417 -------NCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3469
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +L ++ CG + LT GE++TWG + LG G
Sbjct: 3470 GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHG 3521
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 114/247 (46%), Gaps = 16/247 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH 133
A C G H L LT TG V++ G + G+LG + + P RI L +++V + G
Sbjct: 634 AAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDI-PTRIVALAERQVTGVFCGSS 692
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
+S+AIT GELY WG+ + G+LG G K +PT V+ L ALG S+
Sbjct: 693 YSAAITAAGELYTWGRGTYGRLGHGNSEDK--HLPTIVQVLKQQRVIHVALGCGDAHSLC 750
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
VT G V +WG G G+LG+G + S+ L + +G + + F S
Sbjct: 751 VTDTGIVYAWGDGDFGKLGNGTCNG------SSVPVAIELPQCSDGAVKVFSGSHF--SV 802
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ +G VY +G ++ H P I L ++ G H LT+ GEL
Sbjct: 803 ALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGEL 862
Query: 310 YTWGSNE 316
Y WG N+
Sbjct: 863 YGWGRND 869
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 3458 WGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYR 3517
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +P I GL+ K+V+ ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3518 LGHGTD-QHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTI 3576
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V P+ V L GIF + A G SVA
Sbjct: 3577 --VNKKPSLVLGLDGIFVNRVACGSSHSVA 3604
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++ +WG N QLG G K +KV +PT LS + A G + V+ GK+ + G
Sbjct: 3242 KVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACG 3299
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVY 260
G +GRLG G +++ TP+ + L VK A +G H+ + +G+V+
Sbjct: 3300 EGTNGRLGLGHNNNV---------PTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVF 3350
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+G+ K+ +P LI L ++ CG H+ +TS GELYTWG E G
Sbjct: 3351 SWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYG 3410
Query: 319 CLGIG 323
LG G
Sbjct: 3411 RLGHG 3415
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNG+ GRLG G S+ P A + + + CG +++ +T G +Y G +G+
Sbjct: 654 WGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGR 713
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG + L P + LK++ V+ ++ G HS +T G +Y WG G+LG G
Sbjct: 714 LGHGNSEDKHL-PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGT 772
Query: 160 KAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+P+ ++ +C G + F SVA+ G V SWG
Sbjct: 773 CNGSSVPVAIELPQCSDGAVKVFSGSHF--SVALGRDGTVYSWGK-----------GHGG 819
Query: 219 GFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
SE+T P+ I+ LEG + A G H + +G +Y +G
Sbjct: 820 RLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWG 866
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 93/237 (39%), Gaps = 67/237 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAKV-IPIP---------------------------------- 168
++ WG N GQLG G +++ +P P
Sbjct: 4379 IFGWGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4437
Query: 169 ----------------TKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLG 210
T VE L + K+ A+ G + +A++ G+V SWG G G+LG
Sbjct: 4438 AGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4497
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG S + R P+LI+ L G+ V A G HSACI G V +G ++
Sbjct: 4498 HGNRDS---YDR------PKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRL 4548
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ +P L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4549 GHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4605
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
Query: 168 PTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P +E L + Q A E +A+T G V SWG G GRLGHG SS
Sbjct: 619 PKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSS--------- 669
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
+ P I L +V G +SA I G +Y +G ++ P+++
Sbjct: 670 KDIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQ 729
Query: 286 KLPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + V+ CG H+ +T G +Y WG + G LG G
Sbjct: 730 VL-KQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNG 771
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 17/195 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAH-TLFLTETGCVYATGLNDFG 101
WG+GD+G+LG G+ PV + G+H ++ L G VY+ G G
Sbjct: 760 WGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGG 819
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + ++ P I L+ K +V ++ G H A+T GELY WG+N Q L
Sbjct: 820 RLGHGHS-EHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQ--LCPP 876
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
PI L I T L A GG + + W S LG + + F
Sbjct: 877 CVTRDPI-----VLLPILTTPPTLRIAGMAA--GGAQSIVWCH--SSTLGIPVK---IPF 924
Query: 221 LRSTSEYTPRLIKEL 235
+ SE+T RL+ +L
Sbjct: 925 VVDLSEHTFRLLDQL 939
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG + S RP + A + ++ +ACG +H+ ++ TG ++ GL ++G+
Sbjct: 3096 WGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGR 3155
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N+ L + L +VQ++ G + A++ +G ++ WG G+LG G
Sbjct: 3156 LGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRG-- 3213
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G+ G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3214 GSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHV--- 3270
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P L++ L K+ A G LH C + G+VY +GD Q+GN
Sbjct: 3271 ------RKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHG----QQGNGTIL 3320
Query: 279 --RRPSLISKLP--YSEEVVCGGYHTCVLTSG 306
R+PSL+ L V CG H+ T+
Sbjct: 3321 VNRKPSLVLNLEGVRVNRVACGSSHSIAWTTS 3352
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 134/287 (46%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ ++ +K +A GG H + LT G V++ G + G
Sbjct: 3043 GEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3102
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P I LK K + I+ G HS+AI+ GEL+ WG G+LG G
Sbjct: 3103 KLGHDNRLSLD-RPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDN 3161
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V+ L G Q A G Q++A++ G V SWG G G+LG G
Sbjct: 3162 LTQLRP--KLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGG----- 3214
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P I+ L G+ V + G S + + G+VY +G ++ H
Sbjct: 3215 ----SEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHV 3270
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+L+ L + V G H T G++Y WG N++G G G
Sbjct: 3271 RKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNG 3317
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 127/267 (47%), Gaps = 19/267 (7%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P F+ + LA G H+L L+ G VY+ G D G+LG +N +P +I+
Sbjct: 510 PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRD-QPTKIT 568
Query: 120 GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
L K V+ IS G +S+A+T GE+Y WG+ + G+LG G +P T V L F
Sbjct: 569 ELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVP--TLVVGLKDYF 626
Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
A G Q++AVT G V SWG LG S TP+LI++L+
Sbjct: 627 IVDIACGSGDAQTLAVTNTGLVFSWG---------DGGYGKLGTGGSDGSKTPKLIEKLQ 677
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
++V G S + ++G VY +G ++ NH R P L+ L ++V
Sbjct: 678 DIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVA 737
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLG 321
G H LT GE+Y WG N+NG +G
Sbjct: 738 VGSGHVLALTDDGEVYGWGRNDNGQVG 764
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 15/262 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ P + A + + +ACGGAH+ +T G +Y G +G+
Sbjct: 4079 WGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGR 4138
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ L + + +V+ I+ +G + IT D ++ WG G+LG G
Sbjct: 4139 LGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-- 4196
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP K+E L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4197 GSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHV--- 4253
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
P+ I L+G K+ A G LH + G V+ +GD ++ N R
Sbjct: 4254 ------RHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHR 4307
Query: 281 PSLISKL--PYSEEVVCGGYHT 300
P L+ L V CG H+
Sbjct: 4308 PRLVVTLQGKNINRVACGSAHS 4329
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 118/255 (46%), Gaps = 19/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G D G+LG G P I L+ KE+V I+ G
Sbjct: 4059 AVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCD-HPQLIDALQGKEIVDIACGGA 4117
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
HS+A+T GE+Y WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4118 HSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKP--KLVETLIGFKVIDIACGSGDAQTLC 4175
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4176 ITDDDNVWSWGDGDYGKLGRGG---------SDGCKIPMKIESLAGLGVVKVECGSQFSV 4226
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGE 308
+ +G VY +G ++ H R P I+ L ++++C G H + GE
Sbjct: 4227 ALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAAL-QGKKIICIATGSLHCVACSDLGE 4285
Query: 309 LYTWGSNENGCLGIG 323
++TWG N+ G LG G
Sbjct: 4286 VFTWGDNDEGQLGDG 4300
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 120/272 (44%), Gaps = 35/272 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
P C + + +K + C L LT TG VY + YS E P +I
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYI--------------MYYSSETQCPEQI 513
Query: 119 SGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
G KE+ +++ HS A++ DG++Y WG G+LG G ++ PTK+ L
Sbjct: 514 EGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSR--DQPTKITELV 571
Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + G S AVT G+V +WG G GRLGHG S P L+ L
Sbjct: 572 GKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGT---------SEDHTVPTLVVGL 622
Query: 236 EG-VKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
+ V IA +G + + G V+ +GD K+ + ++ P LI KL E
Sbjct: 623 KDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVA 682
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V CG + LT G +YTWG +N LG G
Sbjct: 683 RVYCGSQFSLALTKSGSVYTWGKGDNHRLGHG 714
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 130/289 (44%), Gaps = 21/289 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG P C A L G L +T G VYATG G+
Sbjct: 3973 WGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYATGYGAGGR 4032
Query: 103 LGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG+ LE ++ +KK V +++G H A++ DG++Y WG+ +G+LG G
Sbjct: 4033 LGLGGTDTILTPTLLESIQHIFIKK--VAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHG 4090
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
K P ++ L G A G S AVT GG++ +WG G GRLGHG
Sbjct: 4091 NKNG--CDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGD----- 4143
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S + P+L++ L G KV A +G + CI ++ V+ +GD K+ +
Sbjct: 4144 ----SEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD 4199
Query: 277 HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P I L +V CG + LT G +YTWG + LG G
Sbjct: 4200 GCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4248
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 115/228 (50%), Gaps = 23/228 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGNGD GRLG G SR +P + ++ ++CG ++ +T +G VY G ++G+
Sbjct: 545 WGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGR 604
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL-- 157
LG + +++ P + GLK +V I+ +G + A+T G ++ WG G+LG
Sbjct: 605 LGHGTSEDHTV-PTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGG 663
Query: 158 --GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K K+I E L I + G + S+A+T G V +WG G + RLGHG E+
Sbjct: 664 SDGSKTPKLI------EKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSEN 717
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L G +K A G H + ++G VY +G
Sbjct: 718 HV---------RFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWG 756
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 95/186 (51%), Gaps = 15/186 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + KV IPT E LS + Q G + +AVT GKV +
Sbjct: 3968 GTIYGWGHNHRGQLG-GVEGPKV-KIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYAT 4025
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G +IL TP L++ ++ + +K A +G H + +G+V
Sbjct: 4026 GYGAGGRLGLGGTDTIL---------TPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKV 4076
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ N P LI L E ++ CGG H+ +T+GGE+YTWG
Sbjct: 4077 YSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRY 4136
Query: 318 GCLGIG 323
G LG G
Sbjct: 4137 GRLGHG 4142
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 22/220 (10%)
Query: 115 PLRISGLKKEVVQI-------STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
PL +S L + +I T H ++++WG N QLG G K +KV +
Sbjct: 2951 PLNVSFLATDYEEIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLG-GLKGSKV-KV 3008
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P E L+ + A G + V+ GK+ + G G +GRLG G +++
Sbjct: 3009 PVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNV---------A 3059
Query: 228 TPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
TP + L +K A +G H+ + +G+V+ +G+ K+ RP +I
Sbjct: 3060 TPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIE 3119
Query: 286 KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L ++ CG H+ ++S GEL+TWG E G LG G
Sbjct: 3120 ALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHG 3159
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG GS P + +K +A G H L LT+ G VY G ND GQ
Sbjct: 703 WGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQ 762
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
+G + S EP ++ L+ K +V I G + S A
Sbjct: 763 VGETSETNVS-EPTLLTLLQGKNIVDIDCGPNQSIA 797
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG G++ + RP + + ++ +ACG AH+L + AT
Sbjct: 4289 WGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKSTSAT------H 4342
Query: 103 LGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELY-MWGKNSNGQL 155
L + + Y L + + L+ +V + +H S ++ + ++ M G+ S QL
Sbjct: 4343 LPVDAPMEYDLVRDISLPTLRNRLVLL---HHFSELVSPNVAMFPMEGEGSLDQL 4394
>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
Length = 901
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 138/307 (44%), Gaps = 46/307 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 334 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 453 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 511 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGS-- 559
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P LP + EE+ CG YH VLTS E+YTWG
Sbjct: 560 --PVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGA 613
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 614 NGRLGHG 620
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 34/272 (12%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
K ++ ++CGG H +T+ G +Y+ G G+LG + +P I L ++ +
Sbjct: 309 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 367
Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ G +H+ A+T+ G+LY WG +++G LG G + + +P +V L GI + G
Sbjct: 368 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHW--VPKRVNGPLEGIHVSAISCG 425
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 476
Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
G H+A + E +G+++ +GD DK G+ R P+ ++ L P
Sbjct: 477 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 534
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ CG T LT+ G +YT GS G LG
Sbjct: 535 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLG 566
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + +K +V IS G H++ +T GE+Y WG+ S G+LG G +P P ++
Sbjct: 302 KPLEFA-VKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 358
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G SG LGHG E S + P+
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNE---------VSHWVPKR 409
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG+ V + G H+A + G+++ FGD + + + P + L
Sbjct: 410 VNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGL 469
Query: 289 YSEEVVCGGYHTCVLTS------------GGELYTWGSNENGCLGIG 323
+ CG +HT + G+++TWG + G LG G
Sbjct: 470 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHG 516
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ++R P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 505 WGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQ 564
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G + P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 565 LGNPQADG--MLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 622
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L + G + A+
Sbjct: 623 DDRS--SPTLVEALKDKQVRTVVCGINFTAAI 652
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
IP +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 300 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-------- 351
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +G+ + L GN P +
Sbjct: 352 -QPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 410
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 411 NGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452
>gi|332025816|gb|EGI65973.1| X-linked retinitis pigmentosa GTPase regulator [Acromyrmex
echinatior]
Length = 771
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 144/296 (48%), Gaps = 33/296 (11%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ D+G+LGLG +P + + +ACG AHTL T ++A G N G
Sbjct: 105 IFGSNDWGQLGLGHRNHISKPSCVKILKPERVTHVACGRAHTLICTGAQKIFACGSNQEG 164
Query: 102 QLGISENI--GYSLEPLRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
QLG ++ S P+ I GL ++Q++ G HHS A+T DG + WG N GQLG
Sbjct: 165 QLGRENSVIGDSSSSPILIYDCGLAGPRIIQLAAGSHHSMALTSDGGVVAWGSNLEGQLG 224
Query: 157 LGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
L + + V +PIP V K+ + G+ SV +T G + G SG+LG
Sbjct: 225 LPEISGLVYKPMKVPIPEPV--------KEISAGYYHSVFLTESGLIYICGESESGKLGL 276
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM- 270
+ F +++ P+ + +L + +A G H+ + ENG +Y G A ++
Sbjct: 277 N-----INF---STQVAPKQM-QLPAPALHVACGGH-HTFILAENGNIYCSGSNASGQLG 326
Query: 271 LFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ N P L+ + +E +VCG H+ +LT G+L+T G +G LG+
Sbjct: 327 MGINVNETPTPKLLPRGALQDEKIIKIVCGESHSAILTESGKLFTCGDGRHGKLGL 382
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 133/276 (48%), Gaps = 24/276 (8%)
Query: 58 SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
SR+ + S F K + + CG H+ + +TG ++ G ND+GQLG+ S +P
Sbjct: 67 SRFADNIASHFFIRKDPVVIIECGDEHSAVVCQTGRLFIFGSNDWGQLGLGHRNHIS-KP 125
Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG-----LGKKAAKVIPIPT 169
+ LK E V ++ G H+ T +++ G N GQLG +G ++ I I
Sbjct: 126 SCVKILKPERVTHVACGRAHTLICTGAQKIFACGSNQEGQLGRENSVIGDSSSSPILI-- 183
Query: 170 KVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+C L+G Q A G S+A+T G V++WG+ G+LG + S ++ Y
Sbjct: 184 -YDCGLAGPRIIQLAAGSHHSMALTSDGGVVAWGSNLEGQLGLPEISGLV--------YK 234
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P + E VK +AG+ HS + E+G +YI G+ K+ + +LP
Sbjct: 235 PMKVPIPEPVKE--ISAGYYHSVFLTESGLIYICGESESGKLGLNINFSTQVAPKQMQLP 292
Query: 289 YSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V CGG+HT +L G +Y GSN +G LG+G
Sbjct: 293 APALHVACGGHHTFILAENGNIYCSGSNASGQLGMG 328
>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Ailuropoda melanoleuca]
Length = 348
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 113/248 (45%), Gaps = 22/248 (8%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITVD 141
L++T+ V+ GLN LG +N +L P ++ L K++ +S G H T D
Sbjct: 35 LYVTDNDEVFVFGLNYSNCLGTGDNQS-TLVPKKLEALCGKKIKSLSYGSGPHVLLSTED 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKV 198
G +Y WG N QLG G + PI + + + KQ A G S+A+ G+V
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPI----QVCTNLLIKQVVEVACGSHHSMALAADGEV 149
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENG 257
+WG G++G G +T++ TPR + +K + A G S + +NG
Sbjct: 150 FAWGYNNCGQVGSG---------STTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
VY +G ++ + P ++ L ++VCG HT LT G LY WG+N
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 316 ENGCLGIG 323
G LG G
Sbjct: 261 TYGQLGTG 268
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEITSIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 137/293 (46%), Gaps = 29/293 (9%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WGN +G+LGLG +E W+P ++ +ACG HTLFLT +G VY
Sbjct: 6 WGNASHGQLGLGGIEDEQILTPSQIPWKP-------DSAVNQVACGHRHTLFLTASGKVY 58
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
A G ND+ QLG + PL+I L+ V+ QI+ G HS A+T G++ WG N
Sbjct: 59 ACGSNDYSQLGHELP---TKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNEC 115
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG VI +P V L Q A G S+A+T G++ SWG+ G+LG
Sbjct: 116 GQLGHASD-QDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVK 174
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
S + S Y RL L G+ A G H+ I ++ V+ +G ++
Sbjct: 175 SPSEL-----SQCNYPMRLTT-LLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGL 228
Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 281
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 131/283 (46%), Gaps = 16/283 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ DY +LG L ++ RP+ E + + +ACG H++ LTE G V + G N+ GQL
Sbjct: 61 GSNDYSQLG-HELPTK-RPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+ +
Sbjct: 119 GHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSE 178
Query: 163 -KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G + ++ V WG G+LG E
Sbjct: 179 LSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDE------- 231
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+ P +K L + V+ A G S + G V+ G A ++ ++ P
Sbjct: 232 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 289
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
++ +L S +V CG HT L S G +Y +G +G LG
Sbjct: 290 RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLG 332
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ Q A G ++ +T GKV + G
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P I ELE + A G HS + E G+V +
Sbjct: 62 SNDYSQLGHELPTK-----------RPLQIPELEDYVITQIACGSRHSMALTEWGQVLSW 110
Query: 263 GD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A D+ + Q R L+SK ++ CG H+ LT GELY+WGSN
Sbjct: 111 GDNECGQLGHASDQDVIQLPKIVRY--LVSKTVV--QIACGNNHSLALTCCGELYSWGSN 166
Query: 316 ENGCLGI 322
G LG+
Sbjct: 167 IYGQLGV 173
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 14/183 (7%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S L P+ + A+ACGG HT ++++ V+ G N+
Sbjct: 163 WGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNN 222
Query: 100 FGQLGISE--NIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG+++ N Y L+ LR G++ ++ G S +T +G ++ G + GQL
Sbjct: 223 CGQLGLNDETNRAYPTQLKTLRTLGVRF----VACGDEFSVFLTNEGGVFTCGAGAYGQL 278
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQE 214
G G + +++P V L G Q A G ++A V G++ +G G SG+LG
Sbjct: 279 GHGFSSNEMLP--RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNT 336
Query: 215 SSI 217
S+
Sbjct: 337 KSL 339
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 142/291 (48%), Gaps = 38/291 (13%)
Query: 43 WGNGDYG-----RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG G G R+GLG +E L+ A G H+L L G V++ G
Sbjct: 5 WGPGPRGPVSRRRVGLGGVE---------------LRQAASGERHSLLLLSNGQVHSCGD 49
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N GQLG S + RI L+ V +S G HS A+ G ++ WG S GQLG
Sbjct: 50 NGRGQLG-QRGAPCSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108
Query: 157 LGK-KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+ K +IP+ K++ L+ I KQ + G S+A++ GG+V SWG+ G+LG G+
Sbjct: 109 TGEFKETNLIPM--KIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGK-- 164
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ S+ +P+ ++ L+G+ + AAG HS + +G + +G ++ +
Sbjct: 165 ------KFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKN 218
Query: 276 N---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
N + +P IS L + CG HT VLT G+++T+G N G LG
Sbjct: 219 NVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLG 269
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 130/272 (47%), Gaps = 23/272 (8%)
Query: 46 GDYGRLGLGSLESRWRPVVCSA-------FEKHSLKALACGGAHTLFLTETGCVYATGLN 98
GD GR G L R P CSA E + ++CG H+L + G V+A G
Sbjct: 48 GDNGR---GQLGQRGAP--CSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAG 102
Query: 99 DFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG E +L P++I L ++ Q+S G++HS A++ G+++ WG NS+GQLGL
Sbjct: 103 SEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGL 162
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
GKK P +V L GI Q A G S A++ G WG +G+L + +
Sbjct: 163 GKKFPSQAS-PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNV- 220
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S Y P I L+ + V + G+ H+ + +NG+V+ FGD ++
Sbjct: 221 -----SGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAE 275
Query: 278 ARRPSLISKLP-YSEEVVCGGYHTC--VLTSG 306
P L+ + ++ CG YHT V T+G
Sbjct: 276 KSGPQLVEGIDGLVSQIDCGSYHTLAYVYTTG 307
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG G E+ P+ +K ++CG H+L L+E G V++
Sbjct: 95 RVFA--WGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L + Q++ G HS A+++ G + WG+N+ GQ
Sbjct: 153 GSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQ 212
Query: 155 LGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
L L K P + L + + G+E +V +T GKV ++G G+LGH
Sbjct: 213 LALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSP 272
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 273 TAEKSG---------PQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG---------- 313
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
R P+ S + E + TC++++
Sbjct: 314 -----REPTCKSSPTHPEALTENVDFTCLISADD 342
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E+ Q ++G HS + +G+++ G N GQLG ++ A ++ L + +
Sbjct: 24 ELRQAASGERHSLLLLSNGQVHSCGDNGRGQLG--QRGAPCSAQLKRIRALETLHVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ--ESSILGFLRSTSEYTPRLIKELEGVKVK 241
G E S+AV G+V +WGAG G+LG G+ E++++ P IK L +K+K
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI----------PMKIKTLNDIKIK 131
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGG 297
+ G HS + E G+V+ +G + ++ F +R + +P ++ V GG
Sbjct: 132 QVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQ-VAAGG 190
Query: 298 YHTCVLTSGGELYTWGSNENGCLGI 322
H+ L+ G + WG N G L +
Sbjct: 191 AHSFALSLSGTSFGWGRNNAGQLAL 215
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P+ + L G+ +QAA G S+ + G+V S G G G+LG R
Sbjct: 12 PVSRRRVGLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKR--- 68
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPS 282
I+ LE + V + + G HS + GRV+ +G + ++ F+E N P
Sbjct: 69 ------IRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI--PM 120
Query: 283 LISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
I L ++V CG YH+ L+ GG++++WGSN +G LG+G
Sbjct: 121 KIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLG 163
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 135/286 (47%), Gaps = 29/286 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN YG+LG +++ RP A E + +++CG H+L + +TG +Y+ G GQL
Sbjct: 62 GNNSYGQLGRKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQL 121
Query: 104 GISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E P I+ L ++ ++Q+S G++HS A+T DG+++ WG N +GQLGLG
Sbjct: 122 GIKEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLGTNFP 181
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQESSILGF- 220
P +V L GI Q A G S A++ G WG G+L G+ +S++
Sbjct: 182 SQAS-PQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWGRNKEGQLALSGKNASVVSIN 240
Query: 221 ------------LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
RS S IKE +G+K L+ + +G+V FG
Sbjct: 241 YCIWHEAEALTCKRSNS------IKEFQGLK------ELLNRSRQIADGKVLTFGSNNSG 288
Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT-SGGELYTWG 313
++ R P ++ ++ CG +HT + G++ ++G
Sbjct: 289 QLGHGLITKPRGPQIVESAELFSQIACGSHHTLAYACTSGQVLSFG 334
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 110/227 (48%), Gaps = 17/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-----KALACGGAHTLFLTETGCVYATGL 97
WG+ + +LG+ + R P V E SL ACG H+L L G V++ G
Sbjct: 5 WGDNSFRQLGINA-GRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSCGN 63
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
N +GQLG +NI S P I L+ + VV +S G HS AI G +Y WG S GQLG
Sbjct: 64 NSYGQLG-RKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQLG 122
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ K+ IP + LS Q + G S+A+T GKV SWG G+LG G
Sbjct: 123 I-KEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLGT--- 178
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S+ +P+ + L+G+ + AAG HS + +G Y +G
Sbjct: 179 -----NFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWG 220
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 23/241 (9%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLK------KEVVQISTGYHHSSAITVDGELYM 146
Y G N F QLGI N G P + + +++VQ + G HS + DG ++
Sbjct: 3 YCWGDNSFRQLGI--NAGRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWS 60
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G NS GQ LG+K K P ++ L + G E S+A+ G++ SWG+G
Sbjct: 61 CGNNSYGQ--LGRKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSR 118
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG + P+ I L K+ + G HS + ++G+V+ +GD
Sbjct: 119 GQLGIKEVKDQCSI--------PKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDND 170
Query: 267 VDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ F +R + + +P + +V GG H+ L+ G Y WG N+ G L +
Sbjct: 171 HGQLGLGTNFPSQASPQRVNSLDGIPLA-QVAAGGSHSFALSLSGTSYGWGRNKEGQLAL 229
Query: 323 G 323
Sbjct: 230 S 230
>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101229506 [Cucumis sativus]
Length = 1079
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 142/299 (47%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLGLG + +P + A ++ +ACG HT +T G +Y G+++
Sbjct: 261 WGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNA 320
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG+ + +V ++ G H++ I+ G+L+ +G + G LG G
Sbjct: 321 GLLGNGTDVSHWM-PKRISGILEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHG 379
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
K + I P +V+ L+G+ T A G + AV GK+ +WG G
Sbjct: 380 DKXS--ISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKN 437
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+V+ G +V
Sbjct: 438 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGS-SV 487
Query: 268 DKMLFQEGNHARRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L ++P L+ KL +EEV CG YH VLTS E+YTWG NG LG G
Sbjct: 488 YGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHG 546
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E R +P A ++ +ACG + T+ LT +G V+ G + +GQ
Sbjct: 431 WGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSVYGQ 490
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G + L + +++ G +H +T E+Y WGK +NG+LG G
Sbjct: 491 LGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVED 550
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K A G S A+
Sbjct: 551 R--KSPTLVESLKDKHVKIIACGSNYSAAI 578
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS+ +T GE++ WG+ + G+LGLG K + P VE L+ A G + AVT
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLGLG--MGKDVTQPRLVEALAATTVDLVACGEFHTCAVT 305
Query: 194 GGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHS 250
G++ +WG G +G LG+G + S + P+ I LEG++V A G H+
Sbjct: 306 MDGELYTWGDGVHNAGLLGNGTD---------VSHWMPKRISGILEGLQVAYVACGPWHT 356
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTS--- 305
A I G+++ FGD + + P + L + V CG +HT +
Sbjct: 357 ALISSTGQLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIM 416
Query: 306 --------GGELYTWGSNENGCLGIG 323
G+L+TWG + LG G
Sbjct: 417 TQSSTSIPSGKLFTWGDGDKNRLGHG 442
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 134/289 (46%), Gaps = 20/289 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL--TETGCVYATGLNDF 100
WG+G G LG G P V A +++K LACG HT+F E G VY+ GL +
Sbjct: 4 WGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACG-LHTVFALNAEDGKVYSWGLGKY 62
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITV---DGELYMWGKNSNGQLG 156
G LG N+ PL+I+ K V+ IS H++A+T G +Y +G NSN QLG
Sbjct: 63 GILG-QGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLG 121
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+G + P V L+ + A G S A++ G + WG G G+LG
Sbjct: 122 VGD--TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLG------ 173
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG ++E T I E + KV A G LH+ + G VY FG ++ N
Sbjct: 174 -LGNYNLSTEPTILHIGE-KKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMN 231
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P IS V CG +H+ +T G+LY WG +G LG+G
Sbjct: 232 KFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLG 280
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 19/268 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAH---TLFLTETGCVYATGLND 99
WG G YG LG G+L SR+ P+ ++F+ ++ ++C H +T TG VY+ G N
Sbjct: 57 WGLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNS 116
Query: 100 FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ + Y+ EP ++ L E +++++ G +HS+A++ G L++WG +GQLGLG
Sbjct: 117 NSQLGVGDTEPYA-EPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLG 175
Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P + E + + A G + +T GG V ++G+ G++ +
Sbjct: 176 NYNLSTEPTILHIGEKKAKVM--DVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMNKF 233
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
R + + R + + G HSA I ENG++Y +G ++ +
Sbjct: 234 HLPYRISFNTSKRFVS---------VSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQ 284
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVL 303
P+ + + + CG HT L
Sbjct: 285 RSSPTEVEGFRDKKIGRIACGSKHTAAL 312
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 27 CKRWISSTLQRR-FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTL 84
C ++ S+ L + LWG GD G+LGLG+ P + EK + + +ACG HT
Sbjct: 147 CGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTC 206
Query: 85 FLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGE 143
LT G VYA G N +GQ+ + L P RIS K V +S G HS+AIT +G+
Sbjct: 207 ILTVGGLVYAFGSNIYGQIAAPSMNKFHL-PYRISFNTSKRFVSVSCGSFHSAAITENGK 265
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LY WG ++G+LGLG K PT+VE
Sbjct: 266 LYAWGLETDGRLGLGD--CKQRSSPTEVE 292
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-GGKVLSWG 202
+Y WG NG LG G+ IP P VE L K+ A G A+ GKV SWG
Sbjct: 1 VYTWGSGINGALGHGEDID--IPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWG 58
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC---IDENGRV 259
G G LG G LR S + P I + V + LH+A + G V
Sbjct: 59 LGKYGILGQGN-------LR--SRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSV 109
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y FGD + ++ + P L++ L +V CG YH+ L++ G L+ WG ++
Sbjct: 110 YSFGDNSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDD 169
Query: 318 GCLGIG 323
G LG+G
Sbjct: 170 GQLGLG 175
>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1131
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G F
Sbjct: 373 WGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 432
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P ++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 433 GLLGHGNDISHWV-PKHVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 491
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 492 DRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 549
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + L P + L A G + + +G VY G
Sbjct: 550 GRLGHGDKGPKL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 600
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 601 YGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHG 659
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 127/269 (47%), Gaps = 32/269 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
++ ++CGG H +T+ G +Y+ G G+LG + S +P I L ++ ++
Sbjct: 350 DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVS-QPKLIDALSHMNIELVAC 408
Query: 131 GYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
G +H+ A+T+ G+LY WG + G LG G + +P L GI + G
Sbjct: 409 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGP-LEGIHVSSISCGPWH 467
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ ++G G G LGHG SI PR ++ L+G++ AA G
Sbjct: 468 TAVVTSAGQLFTFGDGSFGVLGHGDRESI---------SVPREVESLKGLRTVRAACGVW 518
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
H+A + E +G+++ +GD DK G+ + P+ ++ L P +
Sbjct: 519 HTAAVVEVMAGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKGPKLVPTCVAALVEPNFCQ 576
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS G LG
Sbjct: 577 VACGHCLTVALTTSGHVYTMGSAVYGQLG 605
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G + P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 544 WGDGDKGRLGHGDKGPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 603
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ G + P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 604 LGNAQADG--MLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDT 661
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K PT VE L + G + A+
Sbjct: 662 DDKN--TPTLVEALKDKQVRIVVCGINFTAAI 691
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 341 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDA 397
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
LS + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 398 LSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------ISHWVPKH 448
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG+ V + G H+A + G+++ FGD + + + P + L
Sbjct: 449 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGL 508
Query: 289 YSEEVVCGGYHTCVLTS------------GGELYTWGSNENGCLGIG 323
+ CG +HT + G+++TWG + G LG G
Sbjct: 509 RTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHG 555
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 339 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDV--------- 389
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 390 SQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHV 449
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT V+TS G+L+T+G G LG G
Sbjct: 450 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 491
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 138/286 (48%), Gaps = 17/286 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P E +++ +ACG +T+ +T+ G VY+ G ND+
Sbjct: 4 WGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNNDY 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V +I+ G H+ A+ G+L+ WG N NGQLGL
Sbjct: 64 GQLG-HEKARKRLQ--LIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNS 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P ++ L Q A G E S+A+T G++ +WG+ G+LG G
Sbjct: 121 VDCTE-RVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGS------ 173
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+T+E P+ I L V + A G H+ I ++G V+ +G ++ +
Sbjct: 174 --YTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRN 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L ++ CG + LT G ++T G+ G LG G
Sbjct: 232 LPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHG 277
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 125/282 (44%), Gaps = 16/282 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG ++R R + + + +ACG HTL + E G +++ G N GQL
Sbjct: 59 GNNDYGQLG--HEKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQL 116
Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P I L V VQI+ G HS A+T DGELY WG N GQLGLG
Sbjct: 117 GLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTT 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
I P ++ L+ + A G ++ ++ G V SWG G+LG
Sbjct: 177 TEIK-PKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLND--------- 226
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P ++ L KV A G S + +G V+ G ++ + P
Sbjct: 227 VQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
+ +L S ++ CG HT L S G +Y WG G LG
Sbjct: 287 QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 96/177 (54%), Gaps = 6/177 (3%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGLGS + +P S + +ACGG HT+ ++++G V++ G N FG
Sbjct: 161 WGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQIST-GYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+++ +L P ++ L+ V +T G S +T+DG ++ G GQLG G
Sbjct: 221 QLGLNDVQQRNL-PCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNT 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+++P +V L G Q + G ++A V G+V +WG GG+G+LG+ S
Sbjct: 280 TNEILP--RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQS 334
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG +G+LGLG + I +P +V+ + +Q A G +VA+T GKV S G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + L +LI L+ + A G H+ ++E G+++ +G
Sbjct: 61 NDYGQLGHEKARKRL-----------QLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWG 109
Query: 264 DRAVDKMLFQEGNHARR-PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ + R P +I L + ++ CG H+ LT+ GELY WGSN G L
Sbjct: 110 CNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQL 169
Query: 321 GIG 323
G+G
Sbjct: 170 GLG 172
>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
Length = 531
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 127/270 (47%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEVASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1124
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 140/307 (45%), Gaps = 47/307 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 356 WGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNY 415
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 416 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 474
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P +VE L G+ T +A+ G + AV GK+ +WG G
Sbjct: 475 DR--KSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 532
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + +E ++A L + + +G VY G
Sbjct: 533 GRLGHGDKEAKL---------VPTCVALVEHNFCQVACGHSL-TVALTTSGHVYAMGS-- 580
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLT E+YTWG
Sbjct: 581 --PVYGQLGN----PQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGA 634
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 635 NGRLGHG 641
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 37/299 (12%)
Query: 43 WGNG--DYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WGNG +YG LG G+ S W P V E + ++CG HT +T G ++ G
Sbjct: 408 WGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGT 467
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAIT------------VDGELYM 146
FG LG + SL P + LK ++ S G H++A+ G+L+
Sbjct: 468 FGALGHGDRKSVSL-PREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFT 526
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG G+LG G K AK++P T V + F Q A G +VA+T G V + G+
Sbjct: 527 WGDGDKGRLGHGDKEAKLVP--TCVALVEHNFC-QVACGHSLTVALTTSGHVYAMGSPVY 583
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG+ Q L + +L+K V+ A G H A + VY +G A
Sbjct: 584 GQLGNPQADGKL-----PTRVEGKLLKSF----VEEIACGAYHVAVLTLRNEVYTWGKGA 634
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTW--GSNENGCLG 321
++ + + P+L+ L + + + CG T + L+ W G +++ C G
Sbjct: 635 NGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAIC----LHKWVSGVDQSMCSG 689
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
GLG K + P +E + + A G + VT G++ SWG GRLGHG +S
Sbjct: 313 GLGVKIDSLFP--KALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDS 370
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+L P+LI L +++ A G H+ + +G +Y +G+ A + L G
Sbjct: 371 DVL---------HPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHG 421
Query: 276 NHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N P ++ + + + CG +HT V+TS G+L+T+G G LG G
Sbjct: 422 NQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 474
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4076 WGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGR 4135
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4136 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4193
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4194 -GSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4250
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4251 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4303
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4304 RPRLVAALQGKKINRVACGSAHT 4326
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 126/247 (51%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ T +++ G D G+LG + + EP +S L K+V+ I+ G +
Sbjct: 504 GQHYLALSATSELFSWGCGDGGRLGHGDTVSLE-EPKLVSALSGKQTGKQVIHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT DGELY WG+ + G+LG G + +P+ V L G+ + G Q+++V
Sbjct: 563 SAAITADGELYTWGRGNYGRLGHGSSEDQTVPM--LVTGLKGLKVVDVSCGSGDAQTLSV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
I ++G+VY +G ++ H R P +++ L + +V G H LT GE+Y
Sbjct: 672 ITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVY 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4036 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4094
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT GELY WGK G+LG G ++ P VE
Sbjct: 4095 PRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKP--KLVEA 4152
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4153 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4203
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L GV V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4204 IDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4263
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4264 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4297
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 117/228 (51%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKA---LACGGAHTLFLTETGCVYATGLN 98
WG GD GRLG G S P + SA K + K +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRG 578
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
++G+LG + ++ P+ ++GLK +VV +S +G + ++T +G+++ WG G+L
Sbjct: 579 NYGRLGHGSSEDQTV-PMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKL 637
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 GRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEE 695
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+++ L+G KV A G H + E+G VY +G
Sbjct: 696 HV---------RYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWG 734
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 33/273 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C A + +AC L L+ G +Y N+ +L P + GL
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNN-----------NTLGPQLVQGL 490
Query: 122 -KKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ +V+I+ H A++ EL+ WG G+LG G + + P V LSG
Sbjct: 491 ASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVS--LEEPKLVSALSGKQ 548
Query: 179 T-KQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
T KQ A G S A+T G++ +WG G GRLGHG S + P L+
Sbjct: 549 TGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGS---------SEDQTVPMLVTG 599
Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL +
Sbjct: 600 LKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDI 659
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG + +T G++Y+WG +N LG G
Sbjct: 660 VKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHG 692
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 123/252 (48%), Gaps = 20/252 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGI 322
TW ++ CL +
Sbjct: 3232 TWXXTKH-CLAV 3242
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3970 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4027
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4028 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4085
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G A G S +T G++ +WG G GRLGHG
Sbjct: 4086 HGNRSP--CDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGD--- 4140
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4141 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4194
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4195 SDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4245
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHATAL 3066
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3127 WGLGEYGRLGHG 3138
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 129/297 (43%), Gaps = 31/297 (10%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3080
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ + + + F N
Sbjct: 3194 -----SEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCLAVXFYYXN 3248
Query: 277 HARRPSLISKLPYSEEVVCGGY-HTCV---------LTSGGELYTWGSNENGCLGIG 323
+ LI V+ G Y TC + ++Y WG N++G G G
Sbjct: 3249 YLLELFLIKV--SVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGNG 3303
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++ IP +E L+G Q G + S+A+T G V +W
Sbjct: 3193 -GSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 92/186 (49%), Gaps = 15/186 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GK+ +
Sbjct: 3965 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4022
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G S+ TP L++ ++ V +K A +G H + G V
Sbjct: 4023 GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4073
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ + RP +I L +E ++ GG H+ +T+ GELYTWG
Sbjct: 4074 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRY 4133
Query: 318 GCLGIG 323
G LG G
Sbjct: 4134 GRLGHG 4139
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 103/227 (45%), Gaps = 40/227 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G ++ +P + H + +ACG A TL LT+ G V++ G DF
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3186
Query: 101 GQLGI--SE--NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG--- 153
G+LG SE NI ++E R++G + V QI G S A+T G ++ W +
Sbjct: 3187 GKLGRGGSEGCNIPQNIE--RLNG--QAVCQIECGAQFSLALTKSGVVWTWXXTKHCLAV 3242
Query: 154 ---------QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV-AVTGGGKVLSWGA 203
+L L K + + + L G + A F+ ++ + KV +WG
Sbjct: 3243 XFYYXNYLLELFLIKVSVRFV--------LLGQYLXTCATYFKLNIIKIVISKKVYAWGD 3294
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
G+ G+G +T P L+ LEG K+ A G HS
Sbjct: 3295 NDHGQQGNGT---------TTVNRKPTLVHGLEGQKITRVACGSSHS 3332
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ +T+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQR 688
Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
LG E++ Y P ++GL+ K+VV ++ G H A+T GE+Y WG N Q L
Sbjct: 689 LGHGTEEHVRY---PKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTL 745
Query: 156 GLGKKAAKVIP 166
+ K V+P
Sbjct: 746 RIAKPVPSVLP 756
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4234 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4293
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4294 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4328
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + + +A G H L LTE+G VY+ G ND
Sbjct: 681 WGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQ 740
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ + P + GL K +V IS G S A
Sbjct: 741 HFDTLRIAKPV-----PSVLPGLDSKHIVGISCGPAQSFA 775
>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1238
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 139/299 (46%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G ++ +P + A ++ +ACG HT +T G +Y G ++
Sbjct: 366 WGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNA 425
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RI+G + +V ++ G H++ IT G+L+ +G + G LG G
Sbjct: 426 GLLGHGTDVSHWI-PKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 484
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
+ + I P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 485 DR--ENISYPREVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKN 542
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + L P I L A G + + +GRV+ G V
Sbjct: 543 RLGHGDKDARL---------EPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGS-TV 592
Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + + P L+ KL EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 593 YGQLGNPQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHG 651
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 102 QLGISENIGYS--------LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
++G +N+ Y +PL S + +V+QI+ G H++ +T GE++ WG+ S G
Sbjct: 314 KVGADKNVSYCSPRTDILLPKPLE-SNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGG 372
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGH 211
+LG G K + P VE L+ A G + AVT G++ +WG G +G LGH
Sbjct: 373 RLGHG--VGKNVVQPCLVEALASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGH 430
Query: 212 GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + S + P+ I LEG++V G H+A I G+++ FGD +
Sbjct: 431 GTD---------VSHWIPKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVL 481
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLT-----------SGGELYTWGSNEN 317
+ + P + L + V CG +HT + S G+L+TWG +
Sbjct: 482 GHGDRENISYPREVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDK 541
Query: 318 GCLGIG 323
LG G
Sbjct: 542 NRLGHG 547
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G ++R P SA ++ +ACG + T+ LT +G V+ G +GQ
Sbjct: 536 WGDGDKNRLGHGDKDARLEPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQ 595
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ G L L L E V +I+ G +H + +T E+Y WGK +NG+LG G
Sbjct: 596 LGNPQSDG-KLPCLVEDKLAGECVEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHGDVE 654
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K A G S A+
Sbjct: 655 DR--KTPTLVEALKDRHVKYIACGSNYSAAI 683
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 45/301 (14%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G + G LG G+ S W P + E + + CG HT +T TG ++ G
Sbjct: 418 WGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGT 477
Query: 100 FGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-----------VDGELYM 146
FG LG ENI Y E +SGL+ V ++ G H++AI G+L+
Sbjct: 478 FGVLGHGDRENISYPREVESLSGLR--TVSVACGVWHTAAIVEVIVTQSSASISSGKLFT 535
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT---KQAALGFEQSVAVTGGGKVLSWGA 203
WG +LG G K A++ P C+S + + A G +V +T G+V + G+
Sbjct: 536 WGDGDKNRLGHGDKDARLEPT-----CISALIDYNFHRIACGHSLTVGLTTSGRVFTMGS 590
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LG+ Q L P L+++ L G V+ A G H + VY +
Sbjct: 591 TVYGQLGNPQSDGKL----------PCLVEDKLAGECVEEIACGAYHVTVLTSRNEVYTW 640
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTW--GSNENG 318
G A ++ + + P+L+ L + + + CG ++ + L+ W G+ ++
Sbjct: 641 GKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAIC----LHKWVSGAEQSQ 696
Query: 319 C 319
C
Sbjct: 697 C 697
>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cavia porcellus]
Length = 780
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 157/326 (48%), Gaps = 35/326 (10%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G + + + + ++G+ ++G+LGLGS +P A +
Sbjct: 28 SKFWFKNDIPMYLSCGDEHTAVVTGNNKLY--MFGSNNWGQLGLGSKSDVKKPTCVKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQ 127
++ ACG HTL LT G VYA G N+ GQLG+ + + RIS E + Q
Sbjct: 86 PEKVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTF-HRISFFTSEHNIKQ 144
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
+S G + S+A++ DG L+MWG NS GQ+GL + +P + G + G+
Sbjct: 145 LSAGSNTSAALSEDGRLFMWGDNSEGQIGLNDVISVCVPHQVNI----GKPISWISCGYY 200
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S VT G++ ++G SG+LG +E I + TP+L+ + +++A G
Sbjct: 201 HSAFVTMDGELYTFGEPESGKLGLPKELLI-------NHRTPQLVAGIPEKVIQVACGGG 253
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGN--------HARRPSLISKLPYSE--EVVCGG 297
H+ + E VY FG L Q G P +I ++ + + CG
Sbjct: 254 -HTVVLTEKA-VYTFG-------LGQFGQLGLGTFCFETLEPKVIEQIKNQKITYISCGE 304
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
HT +++ G +YT+G +G LG+G
Sbjct: 305 NHTALISDIGLMYTFGDGRHGKLGLG 330
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G+G +G+LGLG + +++ P++CS F + +++ +ACGG TL + G NDF
Sbjct: 319 FGDGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACGGCQTLVFAAPR-IDVVGENDF 377
Query: 101 GQLG 104
Q+
Sbjct: 378 NQIN 381
>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Otolemur garnettii]
Length = 531
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 127/270 (47%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERIVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+P I + V+IAA H SA + G VY++G
Sbjct: 275 --------SPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ +V+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333
>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
caballus]
Length = 531
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 127/270 (47%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + IP K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--IPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
[Ailuropoda melanoleuca]
Length = 1035
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 29/268 (10%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
RP +K + ++ G H L L+ G + YS+E R
Sbjct: 99 RPACVKLGKKMKIHSVDQGAEHMLILSSDGKPF--------------EYNYSIEHARFQC 144
Query: 121 L--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ +K ++QI+ G +HS A++ GEL+ WG+N +GQLG+G+ A IP P VE LSG+
Sbjct: 145 ILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFAS-IPTPQAVEHLSGVP 203
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q + G S+A++ G V SWG G+LG G + E P LI+ L+
Sbjct: 204 LVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGH---------TDGEDFPSLIETLDNQ 254
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCG 296
+V+ A G H+A + +G V+ FG ++ + RP L+++L + ++ CG
Sbjct: 255 QVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACG 314
Query: 297 GYHTCVLTSG-GELYTWGSNENGCLGIG 323
HT S G+++++GS + G LG G
Sbjct: 315 RRHTLAYVSDLGKVFSFGSGKEGQLGNG 342
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG + P + + ++ LACGG+HT LT G V+ G +GQ
Sbjct: 226 WGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQ 285
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G GQLG G
Sbjct: 286 LG-HNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGT 344
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++IP+P K+ + + E + G VL W
Sbjct: 345 HNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGNQSVLLW 385
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G L S P L ++ G AH++ L+ +G VY+ G ND G
Sbjct: 173 WGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLG 232
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ G L + ++V ++ G H++ +T DG ++ +G GQLG
Sbjct: 233 QLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQ 292
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L+G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 293 NEL--RPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNG 342
>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
Length = 1082
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 141/297 (47%), Gaps = 29/297 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G+ S ++P + + +++ +ACG HT +T TG +Y G ++
Sbjct: 310 WGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNA 369
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG N+ + + P R+SG + +V +S G H++ IT G+LY +G + G LG G
Sbjct: 370 GLLGHGSNVSHWI-PKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHG 428
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---------TGGGKVLSWGAGGSGRL 209
+ + I P +VE L G+ T + G + AV T GK+ +WG G RL
Sbjct: 429 NR--ETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRL 486
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG SS L P + L A G + + +G ++ G +V
Sbjct: 487 GHGDRSSKL---------KPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGS-SVYG 536
Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L N R P L+ + EVVCG YH VLT GE+YTWG NG LG G
Sbjct: 537 QLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHG 593
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 142 GELYMWG--------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG + + AA I +P +E + A G + + VT
Sbjct: 243 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 302
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+V +WG SGRLGHG +SI + PRL++ L V+ A G H+ I
Sbjct: 303 RQAEVFTWGEECSGRLGHGAGTSI---------FQPRLVESLSICNVETIACGEFHTCAI 353
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD + L G++ P +S P V CG +HT ++TS G
Sbjct: 354 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLEGLQVSAVSCGTWHTALITSSG 412
Query: 308 ELYTWGSNENGCLGIG 323
+LYT+G G LG G
Sbjct: 413 KLYTFGDGTFGVLGHG 428
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G S+ +P + ++ CG T+ LT +G ++ G + +GQ
Sbjct: 478 WGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQ 537
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N G + VV++ G +H + +T GE+Y WGK +NG+LG G A
Sbjct: 538 LGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIAD 597
Query: 163 KVIPIPTKVECLSGIFTKQAALG 185
+ PT VE L K+ A G
Sbjct: 598 R--KTPTFVEALRDRSVKRIACG 618
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y+ G +G+
Sbjct: 2282 WGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGR 2341
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 2342 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 2399
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 2400 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 2456
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 2457 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 2509
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 2510 RPRLVAALQGKKINRVACGSAHT 2532
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 209 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 267
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 268 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 325
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 326 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 376
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 377 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 436
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 437 SWGSNDQ 443
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 123/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 2242 ESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 2300
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P + L+ EVV I+ G HS+ ITV G+LY WGK G+LG G ++ P VE
Sbjct: 2301 PRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKP--KLVEA 2358
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 2359 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 2409
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 2410 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 2469
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 2470 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 2503
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 128/278 (46%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + GL
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYN-------SDTLG----PQLVQGL 195
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+++ + HH A+ GE++ WG G+LG G +P+ P + LSG
Sbjct: 196 ASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 251
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 252 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 299
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 300 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 359
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 360 QDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 397
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 224 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 282
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 283 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 341
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 342 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 399
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 400 EHV---------RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 439
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 2176 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 2233
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 2234 GRLGIGGTESVSTPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 2291
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P VE L GI A G S +T G + SWG G GRLGHG
Sbjct: 2292 HGNRSP--CDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGD--- 2346
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 2347 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 2400
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 2401 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 2451
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 19/250 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 1189 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRH 1248
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 1249 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 1306
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 1307 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 1357
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 1358 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 1417
Query: 311 TWGSNENGCL 320
TWG + G L
Sbjct: 1418 TWGRGDFGEL 1427
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1143 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 1200
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPL--------PRQITALSNYVVKKVAVHSGGRHAMAL 1252
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 1253 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 1312
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 1313 WGLGEYGRLGHG 1324
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 11/211 (5%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
L R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +
Sbjct: 1225 LPRQITALSNYVVK---KVAVHSG-GRHAMALTVDGKVFS-WGEGDDGKLGHFSRMNCDK 1279
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 1280 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVL 1338
Query: 122 K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
V+Q++ G + A+T +G ++ WG G+LG G ++ +P +E L+G
Sbjct: 1339 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNVPQNIERLNGQG 1396
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
Q G + S+A+T G V +WG G G L
Sbjct: 1397 VCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 123/286 (43%), Gaps = 57/286 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G ++ +P + H + +ACG A TL LT+ G V++ G DF
Sbjct: 1313 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1372
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGK---------- 149
G+LG + G ++ P I L + V QI G S A+T G ++ WG+
Sbjct: 1373 GKLGRGGSEGCNV-PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDS 1431
Query: 150 ------NSNGQLGLGKKAAKVIPIP--------------TKVECLSGI--FTKQAALGFE 187
N + ++ + K A +IP+P +E SGI F Q E
Sbjct: 1432 HIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRE 1491
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+ + +V +WG G+ G+G +T P L++ LEG K+ A G
Sbjct: 1492 RQL------EVYAWGDNDHGQQGNGT---------TTVNRKPTLVQGLEGQKITRVACGS 1536
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
HS V + A + +LFQ AR P S L S +V
Sbjct: 1537 SHSVAWTT---VDVAAPSAHEPVLFQT---ARDPLGASYLGVSSDV 1576
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 2171 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 2229
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 2230 YGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 2289
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+++ L G++V AAG HSACI G +Y +G
Sbjct: 2290 LGHGNRSPC---------DRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYG 2340
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 2341 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 2399
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 2440 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 2499
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 2500 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 2534
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 386 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 445
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ +P + GL K +V I+ G S A
Sbjct: 446 HFDTLRITKP-----QPSALPGLDTKHIVGIACGPAQSFA 480
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG---------CVY 93
WG+ D+G+ G G+ +P + E + +ACG +H++ T ++
Sbjct: 1499 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVAAPSAHEPVLF 1558
Query: 94 ATGLNDFGQ--LGISENIGYSLEPLRISGL 121
T + G LG+S ++ S +ISGL
Sbjct: 1559 QTARDPLGASYLGVSSDVDPSAVSNKISGL 1588
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 23/227 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G + R P SAF+ + ++ CG +T+ +++G VY+ G DFG
Sbjct: 73 WGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFG 132
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + + P+R + GL+ + QIS G H A+T++ ++ WG+N NG+LGLG
Sbjct: 133 RLGHGDPSDLFIPHPIRALQGLR--IKQISCGDCHCLAVTMENKVLSWGRNQNGELGLG- 189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K +P K+ GI K A G E SVA+T G + WG G G LG G +
Sbjct: 190 -TTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND--- 245
Query: 220 FLRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
RLI E ++G K+ + + G+ H+ I +G +Y G
Sbjct: 246 ----------RLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 282
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 116/237 (48%), Gaps = 19/237 (8%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGK 149
V + G + GQLG + L P ++S +++V ++ G ++ A + G ++Y WG
Sbjct: 70 VCSWGRGEDGQLGHGDT-DDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGW 128
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G + IP P + L G+ KQ + G +AVT KVLSWG +G L
Sbjct: 129 GDFGRLGHGDPSDLFIPHP--IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 186
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + + P+ I EG+++K+ AAG HS I E+G +Y +G
Sbjct: 187 GLGT---------TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGN 237
Query: 270 MLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + N P ++ +++V CG HT ++S G LYT G ++ G LG G
Sbjct: 238 LGLGDTNDRLIPEKVNI--DGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHG 292
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G + P A + +K ++CG H L +T V + G N G+
Sbjct: 126 WGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGE 185
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ +++ + L G++ ++V + G HS AIT DG+LY WG G LGLG
Sbjct: 186 LGLGTTKDSHVPQKILAFEGIRIKMV--AAGAEHSVAITEDGDLYGWGWGRYGNLGLGDT 243
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++IP ++ G + G+ +++++ G + + G G+LGHG L
Sbjct: 244 NDRLIPEKVNID---GDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCL-V 299
Query: 221 LRSTSEYTPRLIKEL 235
R + +LI ++
Sbjct: 300 PRKVQALSDKLISQV 314
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 15/194 (7%)
Query: 134 HSSAITVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
++SA+ G + WG+ +GQLG G +++P TK+ G G + +VA
Sbjct: 59 NASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLP--TKLSAFDGQDIVSVTCGADYTVAR 116
Query: 193 TGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ GK V SWG G GRLGHG S + + P I+ L+G+++K + G H
Sbjct: 117 SKSGKDVYSWGWGDFGRLGHGDPSDL---------FIPHPIRALQGLRIKQISCGDCHCL 167
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
+ +V +G ++ + P I + V G H+ +T G+L
Sbjct: 168 AVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDL 227
Query: 310 YTWGSNENGCLGIG 323
Y WG G LG+G
Sbjct: 228 YGWGWGRYGNLGLG 241
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LGLG+ + P AFE +K +A G H++ +TE G +Y G +G
Sbjct: 178 WGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGN 237
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + L P +++ ++V +S G+ H+ +I+ G LY G + GQLG G
Sbjct: 238 LGLGDT-NDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFED 296
Query: 163 KVIPIPTKVECLSGIFTKQAAL 184
+ +P KV+ LS Q L
Sbjct: 297 CL--VPRKVQALSDKLISQVIL 316
>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 683
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG + +
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
+ P+ + + G V++A G H+ + E VY FG + LF+
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFLFE-- 282
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I + + + CG HT ++T G +YT+G +G LG+G
Sbjct: 283 --TSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLG 330
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 30/258 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + L FT KQ + G S
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEER------STFHLISFFTSQRKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G+ +G T+ P+ + G + + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQ---------IGLENVTNVCVPQQV--TVGKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
SA + G++Y FG+ K+ NH R P + +P +V CGG HT VLT
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Query: 306 GGELYTWGSNENGCLGIG 323
+YT+G + G LG+G
Sbjct: 261 KA-VYTFGLGQFGQLGLG 277
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P ++ + CG YH+ +T+ G+LYT+G E G LG+
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGL 224
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
+ACGG HT+ LTE VY GL FGQLG+ + + P I +K + + I+ G +H
Sbjct: 248 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENH 306
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
++ IT G +Y +G +G+LGLG + + IPT
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPT 341
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG S ++ P +CS F + ++ ++CGG HTL
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVF 364
>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
Length = 833
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 13/289 (4%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +L GS E +P + AF + + + G T + G V A G +G
Sbjct: 381 VWGSNSSHQLAEGSQEKILQPKLSPAFA--NAQTIEAGQYCTFVVYSDGTVRACGKGSYG 438
Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
+LG+ + N +L+ L + + +IS+ H+ A+T DGE++ WG G+LG
Sbjct: 439 RLGLGDSNNQTTLKKLNFDH-RYVIRKISSSKGSDGHTLALTADGEVFSWGDGDYGKLGH 497
Query: 158 GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P +++ L G K + G+ S AVT G++ +WG G GRLGHG +
Sbjct: 498 GNSSTQ--KYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNR 555
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
LG + Y P++I+ L G+ ++ G S + G+++ +G A E
Sbjct: 556 KLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTSTGQLFAWGCGACLGCGSPEST 615
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP L+ +L + +V CG H LT E+Y WG+N G G G
Sbjct: 616 -ALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNAMGQCGQG 663
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 72/270 (26%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G YGRLGLG ++ + ++ ++ ++ HTL LT G V++ G D+
Sbjct: 433 GKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGHTLALTADGEVFSWGDGDY 492
Query: 101 GQLGISENIGYSLEPLRISG-LKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG N P +I G L+ +VV+ IS GY HS+A+T DGEL+ WG+ G+LG G
Sbjct: 493 GKLGHG-NSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTWGEGDYGRLGHG 551
Query: 159 KKAAKV-------IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG------ 205
K+ + P +E L G++ ++ G + S+A+T G++ +WG G
Sbjct: 552 DSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTSTGQLFAWGCGACLGCGS 611
Query: 206 ---------------------------------------------SGRLGHGQESSILGF 220
G+ G G S +
Sbjct: 612 PESTALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPI-- 669
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
P+ + L+GV V +AG HS
Sbjct: 670 ------TKPKKVVGLDGVTVHQISAGTSHS 693
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 43 WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG GDYGRLG G + ++P V A ++ + CG +L LT TG ++
Sbjct: 540 WGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTSTGQLF 599
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
A G LG +L P + L +V ++ G H A+T D E+Y WG N+
Sbjct: 600 AWGCG--ACLGCGSPESTALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNAM 657
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
GQ G G + + P KV L G+ Q + G S+A T +V++W
Sbjct: 658 GQCGQGHSQSPITK-PKKVVGLDGVTVHQISAGTSHSLAWTALPTDRQVVAW 708
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 97/248 (39%), Gaps = 72/248 (29%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIP-----------IPTKVECLSGIF-------- 178
+T + E+Y+WG NS+ QL G + + P I C ++
Sbjct: 373 VTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAFANAQTIEAGQYCTFVVYSDGTVRAC 432
Query: 179 ----------------TKQAALGFEQSVAV----------------TGGGKVLSWGAGGS 206
T L F+ + T G+V SWG G
Sbjct: 433 GKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGHTLALTADGEVFSWGDGDY 492
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-- 264
G+LGHG ST +Y ++ L+G VK +AG+ HSA + E+G ++ +G+
Sbjct: 493 GKLGHGNS--------STQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTWGEGD 544
Query: 265 -------RAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
+ K+ + N +P +I L Y +V CG + LTS G+L+ WG
Sbjct: 545 YGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTSTGQLFAWGC- 603
Query: 316 ENGCLGIG 323
CLG G
Sbjct: 604 -GACLGCG 610
>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 553
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 120/287 (41%), Gaps = 19/287 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG GS S PV S A+A G H+L LT G + A G N FGQ
Sbjct: 111 WGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGDNTFGQ 170
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
LG S P+ +S V I+ G H+ +T G L WGKN+ GQLG G
Sbjct: 171 LGDGSTTDRS-TPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTLLTWGKNTRGQLGDGTT 229
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V G+ A G + S+ +T L+WG G+LG+G
Sbjct: 230 TGRDTPV--AVTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLGNGT------- 280
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T P + G + AAG LHSA + G + +G ++ +
Sbjct: 281 --TTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSE 338
Query: 281 PSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S LP + H +TS G WG+N NG LG G
Sbjct: 339 PVAVS-LPADTRLTAIAGRDSDHNVTITSAGAALAWGANANGELGDG 384
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 134/329 (40%), Gaps = 37/329 (11%)
Query: 12 YYLKQDIKLGSKLGICKRWISSTLQRRFAAL---------WGNGDYGRLGLGSLESRWRP 62
+ L + L +G W Q R AA WG D G+LG G++ P
Sbjct: 23 FILALAVTLAQSIGASPGWA----QHRSAATAVVSDTILAWGENDGGQLGNGTMIDSSEP 78
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GL 121
V S ++ A+A G H L LT G V A G N GQLG S P+ +S
Sbjct: 79 VAVSLPAGTAVAAVAVGDRHGLALTSAGTVLAWGRNIEGQLGNGSTTSSS-TPVAVSLPT 137
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
V ++ G HS A+T G + WG N+ GQLG G + P+ V +G
Sbjct: 138 GTRAVAVAAGADHSLALTSAGTILAWGDNTFGQLGDGSTTDRSTPV--AVSLPAGTTVAA 195
Query: 182 AALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
A G + ++ +T G +L+WG G+LG G +T TP + GV V
Sbjct: 196 IAAGRDHNLVLTSTGPTLLTWGKNTRGQLGDGT---------TTGRDTPVAVTLPPGVTV 246
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEE---VV 294
A G HS + + +G + Q GN SL+ LP E +
Sbjct: 247 TSVAGGRDHSLVLTSDDTALAWGGNS----FGQLGNGTTTDSLVPIAVALPTGTEATAIA 302
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H+ LTS G + WG N G LG G
Sbjct: 303 AGRLHSAALTSEGAAFAWGHNGRGQLGNG 331
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ P+ + A+A G H+ LT G +A G N GQ
Sbjct: 268 WGGNSFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQ 327
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG--YHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG S EP+ +S + G H+ IT G WG N+NG+LG G
Sbjct: 328 LGNGSTTDSS-EPVAVSLPADTRLTAIAGRDSDHNVTITSAGAALAWGANANGELGDGST 386
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ P+ V +G A G +QS+A+
Sbjct: 387 TDRSTPV--AVSLPAGTRVAAIAAGDDQSMAL 416
>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
Length = 531
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ V++I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPHEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + L ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226798 [Cucumis sativus]
Length = 1103
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 139/307 (45%), Gaps = 46/307 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +
Sbjct: 332 WGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNS 391
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +++ + + P R++G + + IS G H++ +T G+L+ +G + G LG G
Sbjct: 392 GLLGHGKDVSHWV-PKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I IP +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 451 DRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G +Y G
Sbjct: 509 GRLGHGDKEARL---------VPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGS-- 557
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 558 --PVYGQLGN----PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGA 611
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 612 NGRLGHG 618
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E+R P +A + + +ACG + T+ LT +G +Y G +GQ
Sbjct: 503 WGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQ 562
Query: 103 LGISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G P R+ G L K V +++ G +H + +T E+Y WGK +NG+LG G
Sbjct: 563 LGNPQADGKL--PARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGST 620
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K A G + A+
Sbjct: 621 DDR--NTPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 129/302 (42%), Gaps = 42/302 (13%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G Y G LG G S W P V + + +++CG HT +T G ++ G
Sbjct: 384 WGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGT 443
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAIT------------VDGELYM 146
FG LG + S+ P + LK V+ + G H++A+ G+L+
Sbjct: 444 FGVLGHGDRDSISI-PREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFT 502
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTGGGKVLSWGA 203
WG G+LG G K A+++P C++ + Q A G +VA+T G + + G+
Sbjct: 503 WGDGDKGRLGHGDKEARLVPT-----CVAALVEPNFCQVACGHSLTVALTNSGHIYTMGS 557
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG+ Q L R + + ++EL A G H A + VY +G
Sbjct: 558 PVYGQLGNPQADGKLP-ARVEGKLSKSFVEEL--------ACGAYHVAVLTSRTEVYTWG 608
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW--GSNENGC 319
A ++ + P+L+ L + + CG T + L+ W G +++ C
Sbjct: 609 KGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMC 664
Query: 320 LG 321
G
Sbjct: 665 SG 666
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + A G + VT G+V SWG GRLGHG +S
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
+ P+LI L + +++ A G H+ + +G +Y +GD + L G P +
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV 408
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 409 TGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450
>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
distachyon]
Length = 1092
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 135/299 (45%), Gaps = 30/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G F
Sbjct: 337 WGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 396
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + + P ++ G + V IS G H+ +T G+L+ +G S G LG G
Sbjct: 397 GLLGHGNDISHWV-PKKLHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHG 455
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 456 DRES--LSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 513
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + S L P + L A G + + +G VY G
Sbjct: 514 GRLGHGDKESRL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 564
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 565 YGQLGNPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 623
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ESR P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 508 WGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 567
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G + P R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 568 LGNPQADG--MLPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNT 625
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K PT VE L + G + A+
Sbjct: 626 DDKN--TPTLVEALKDKQVRNVVCGTNFTAAI 655
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ ++ GE+Y WG+ S G+LG G + P ++
Sbjct: 305 KPLEFA-VRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCD--VAHPKLIDA 361
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 362 LTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------ISHWVPKK 412
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG+ V + G H+ + G+++ FGD + + + P + L
Sbjct: 413 LHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGL 472
Query: 289 YSEEVVCGGYHTCVLTS------------GGELYTWGSNENGCLGIG 323
+ CG +HT + G+++TWG + G LG G
Sbjct: 473 RTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHG 519
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + + V+ G++ SWG GRLGHG + +
Sbjct: 303 VPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVA-------- 354
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSL 283
P+LI L + +++ A G H+ + +G +Y +GD L GN H L
Sbjct: 355 -HPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKL 413
Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 414 HGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHG 455
>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 1 [Bos taurus]
Length = 531
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG + N L P I K+ V++I+ + H S+A T G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPHEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + L ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG GS RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 2371 WGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 2430
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 2431 LGHSDSED-QLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 2488
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 2489 -GSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHV-- 2545
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G K A G LH C E+G VY +GD ++ N +
Sbjct: 2546 -------RRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 2598
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 2599 RPRLVAALQGKKVNRVACGSAHT 2621
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 1376 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1435
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG + L+P + L VVQ++ G + A+T +G ++ WG G+LG G
Sbjct: 1436 LGHGDTT-TQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 1493
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 1494 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 1550
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 1551 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 1599
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 1600 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 1631
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 1322 GEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 1381
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 1382 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 1440
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 1441 TTTQLKPKMVKV--LLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 1494
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 1495 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 1549
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 1550 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 1597
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 119/274 (43%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG
Sbjct: 2331 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD-R 2389
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 2390 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 2447
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 2448 LQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 2498
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + + G VY +G ++ +H RRP + L +
Sbjct: 2499 IDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 2558
Query: 292 EVV--CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 2559 AIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 2592
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VVQ++ G A+TV+G++Y G+ +NG+LGLG + V P+P +V LS K+ A+
Sbjct: 1299 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTV-PLPRQVTALSSYVVKKVAV 1357
Query: 185 --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G + A+T GKV SWG G G+LGH F R + PRLI+ L+ +++
Sbjct: 1358 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 1408
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGY-- 298
A G HSA + +G +Y +G ++ + +P ++ L +V CG
Sbjct: 1409 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDA 1468
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
T LT G +++WG + G LG G
Sbjct: 1469 QTLALTDEGLVFSWGDGDFGKLGRG 1493
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 1304 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRH 1363
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 1364 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 1421
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 1422 SGELYTWGLGEYGRLGHGD---------TTTQLKPKMVKVLLGHRVVQVACGSRDAQTLA 1472
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 1473 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 1532
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 1533 TWGKGDYFRLGHG 1545
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 135/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 2265 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 2322
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 2323 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 2380
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 2381 HGSRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 2435
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 2436 ------SEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 2489
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L V CG + LT G +YTWG + LG G
Sbjct: 2490 SDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHG 2540
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G++ ++ I +P+ E LS + Q A G + AVT GKV + G +GRLG G
Sbjct: 1273 GRIRAEEEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLG 1332
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
S + R + + ++K KV + + G H+ + +G+V+ +G+ K+
Sbjct: 1333 LSSGTVPLPRQVTALSSYVVK-----KVAVHSGG-RHATALTVDGKVFSWGEGDDGKLGH 1386
Query: 273 QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +P LI L ++ CG H+ LTS GELYTWG E G LG G
Sbjct: 1387 FSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 1439
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 93/239 (38%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 2260 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 2318
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 2319 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 2378
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 2379 LGHGSRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 2429
Query: 269 KMLFQEGNHARRPSLISKLPYSEEV--VCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L V CG T LT +++WG + G LG G
Sbjct: 2430 RLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 2488
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + A+A G H + TE G VY G ND GQ
Sbjct: 2529 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 2588
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 2589 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 2623
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 2258 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 2317
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 2318 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 2377
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 2378 KLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 2432
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 145/324 (44%), Gaps = 56/324 (17%)
Query: 43 WGNGDYGRLGLGSLESRW----RPVVCSAFEKHSLK----ALACGGAHTLFLTETGCVYA 94
WGN G+LGL P AF S+ A+ACG AHTLFL + G VY+
Sbjct: 88 WGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVD-GQVYS 146
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G ND GQLG + + +P R+ L+ + QI+ G HS A+T +G+++ WG N
Sbjct: 147 CGSNDQGQLGHKK---HRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKAS 203
Query: 154 QLGL---------------GKKAAKVIPI-----------------PTKVECLSGIFTKQ 181
QLGL K AA I P V L+G Q
Sbjct: 204 QLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRALTGHKIVQ 263
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G S+ ++ G V +WG SG+L L L++ P L+KEL G+ ++
Sbjct: 264 IVCGANFSLVLSERGDVFAWGDNTSGQL-------CLRELKTVP--VPTLVKELYGIPIR 314
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
AAG H+ + NG+VY +G+ ++ + PS + L + + CG H
Sbjct: 315 QLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDH 374
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ VLT G +Y++G+ G LG G
Sbjct: 375 SVVLTETGGVYSFGAGGQGQLGHG 398
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 107/217 (49%), Gaps = 22/217 (10%)
Query: 53 LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS 112
L ++ RP + A H + + CG +L L+E G V+A G N GQL + E
Sbjct: 241 LAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRE----- 295
Query: 113 LEPLRISGLKKE-----VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
L+ + + L KE + Q++ G H+ A+T +G++Y WG N GQLG+G A I
Sbjct: 296 LKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHT--I 353
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P++++ L F A G + SV +T G V S+GAGG G+LGHG +E
Sbjct: 354 PSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQ---------NEI 404
Query: 228 TPRLIKELEGVKVKIAAAGFLHSAC-IDENGRVYIFG 263
PR+I EL G G H+ + ++Y FG
Sbjct: 405 NPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFG 441
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 42/270 (15%)
Query: 90 GCVYATGLNDFGQLGISENIGYSL---EPLRISGLKKEVVQ-----ISTGYHHSSAITVD 141
G V+A G GQLG+ ++L EP + + I+ G H+ VD
Sbjct: 83 GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHT-LFLVD 141
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G++Y G N GQLG K +K P +V+ L Q A G S+A+T G+V +W
Sbjct: 142 GQVYSCGSNDQGQLGHKKHRSK----PERVDALEPYTITQIACGETHSLALTSNGQVFAW 197
Query: 202 GAGGSGRLG-HGQESSILGFLRSTSEYT------------------------PRLIKELE 236
G + +LG ESS RS++ T PRL++ L
Sbjct: 198 GDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRALT 257
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEV 293
G K+ G S + E G V+ +GD ++ +E P+L+ +L P ++
Sbjct: 258 GHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPI-RQL 316
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
GG HT LT G++Y+WG+N+ G LG+G
Sbjct: 317 AAGGRHTLALTFNGQVYSWGNNQFGQLGVG 346
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 10/213 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+L L L++ P + ++ LA GG HTL LT G VY+ G N FGQ
Sbjct: 283 WGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQ 342
Query: 103 LGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + +++ P R+ L+ + I+ G HS +T G +Y +G GQLG G
Sbjct: 343 LGVGDTAPHTI-PSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQ 401
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P + L G Q G ++ K+ ++G GG+G+LG G +G
Sbjct: 402 NEI--NPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTG-----VGV 454
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
TP L++ L+ + A G S C
Sbjct: 455 EPQQHVLTPMLVRVLDATPILRIATGASASHCF 487
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 27/291 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + V A E +S++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P R+ L ++ Q + G H A+ G Y WG N GQ G
Sbjct: 70 LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ ++E+GR+ +G+ ++ +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L ++ GG+H+ LT GE+Y WG E+G LG+G
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLG 283
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G + A G N++GQLG + S P+ + GL
Sbjct: 189 PVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS-HPVPVQGL 245
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T GE+Y WG+ +G+LGLG +P KV L+
Sbjct: 246 DDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDII 305
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 306 QVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 4/141 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + PV + +L +A GG H+ LT+ G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ +N S + P +++ L +E ++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 161 AAKVIP--IPTKVECLSGIFT 179
P +P K+ G F
Sbjct: 340 VTTGQPLELPIKIPPPEGSFN 360
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 62/170 (36%), Gaps = 53/170 (31%)
Query: 198 VLSWGAGGSGRLGHG-------------------------------------------QE 214
+++WG+G G+LG G +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 215 SSILGFLRST-SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-----D 268
LG T +E P +K L VK+ AA G H +D+ GR Y +G +
Sbjct: 67 RGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126
Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGS 314
+ + G RR +I K + +V GG H+ VLT G ++TWG
Sbjct: 127 PLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
Length = 1103
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 139/307 (45%), Gaps = 46/307 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +
Sbjct: 332 WGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNS 391
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +++ + + P R++G + + IS G H++ +T G+L+ +G + G LG G
Sbjct: 392 GLLGHGKDVSHWV-PKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I IP +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 451 DRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G +Y G
Sbjct: 509 GRLGHGDKEARL---------VPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGS-- 557
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 558 --PVYGQLGN----PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGA 611
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 612 NGRLGHG 618
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E+R P +A + + +ACG + T+ LT +G +Y G +GQ
Sbjct: 503 WGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQ 562
Query: 103 LGISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G P R+ G L K V +++ G +H + +T E+Y WGK +NG+LG G
Sbjct: 563 LGNPQADGKL--PARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGST 620
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K A G + A+
Sbjct: 621 DDR--NTPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 129/302 (42%), Gaps = 42/302 (13%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G Y G LG G S W P V + + +++CG HT +T G ++ G
Sbjct: 384 WGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGT 443
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAIT------------VDGELYM 146
FG LG + S+ P + LK V+ + G H++A+ G+L+
Sbjct: 444 FGVLGHGDRDSISI-PREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFT 502
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTGGGKVLSWGA 203
WG G+LG G K A+++P C++ + Q A G +VA+T G + + G+
Sbjct: 503 WGDGDKGRLGHGDKEARLVPT-----CVAALVEPNFCQVACGHSLTVALTNSGHIYTMGS 557
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG+ Q L R + + ++EL A G H A + VY +G
Sbjct: 558 PVYGQLGNPQADGKLP-ARVEGKLSKSFVEEL--------ACGAYHVAVLTSRTEVYTWG 608
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW--GSNENGC 319
A ++ + P+L+ L + + CG T + L+ W G +++ C
Sbjct: 609 KGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMC 664
Query: 320 LG 321
G
Sbjct: 665 SG 666
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I+ G H++ +T GE++ WG+ G+LG G + P ++ LS + + A
Sbjct: 309 DVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSD--AHHPKLIDALSNLNIELVA 366
Query: 184 LGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTP-RLIKELEGVKV 240
G + AVT G + +WG G SG LGHG++ S + P R+ L+G+ +
Sbjct: 367 CGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKD---------VSHWVPKRVTGPLQGLHI 417
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
+ G H+A + G+++ FGD + + + P + L + CG +
Sbjct: 418 SSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVW 477
Query: 299 HTCVLTS------------GGELYTWGSNENGCLGIG 323
HT + G+L+TWG + G LG G
Sbjct: 478 HTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHG 514
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + A G + VT G+V SWG GRLGHG +S
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA--------- 348
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
+ P+LI L + +++ A G H+ + +G +Y +GD + L G P +
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV 408
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 409 TGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 547 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 605
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 606 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 663
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 664 TDNGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 714
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 715 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 774
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 775 SWGSNDQ 781
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 533
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 534 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 589
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 590 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 637
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + +NG+V+ +GD K+ + + P LI KL
Sbjct: 638 MLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 697
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 698 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 735
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 25/256 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 562 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 620
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 621 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGK 679
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 680 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 737
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
+ P+L++ L+G KV AAG H + E+ V+ +G + D +
Sbjct: 738 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 788
Query: 271 LFQEGNHARRPSLISK 286
+ A P L +K
Sbjct: 789 RVTKPEPAALPGLDTK 804
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 19/120 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 724 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 783
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
F L +++ EP + GL K +V I+ G S + W S +GL
Sbjct: 784 HFDTLRVTKP-----EPAALPGLDTKHIVGIACGPAQS---------FAWSSCSEWSIGL 829
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 19/264 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3094 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3153
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N+ L ++ + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 3154 LGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS 3213
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3214 EGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV--- 3268
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--A 278
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3269 ------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFVN 3320
Query: 279 RRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3321 KKPALVIGLDAVFVNRVACGSSHS 3344
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 129/287 (44%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3041 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3100
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 3101 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3159
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3160 VTQLKP--KLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3212
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3213 ----SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3268
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P I L V G H +T G++Y WG N++G G G
Sbjct: 3269 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3315
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4156 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4215
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4216 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4273
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4274 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4330
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH ++G VY +GD ++ +
Sbjct: 4331 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4383
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4384 RPRLVAALQGKHIVKVTCGSAHTLALST 4411
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4050 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4107
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4108 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4166
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4167 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4220
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4221 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4270
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S KLPY E V CG + LT G +YTWG + LG G
Sbjct: 4271 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4325
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4136 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4193
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4194 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4251
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4252 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 4302
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4303 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4362
Query: 309 LYTWGSNENGCLGIG 323
+YTWG N+ G LG G
Sbjct: 4363 VYTWGDNDEGQLGDG 4377
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 125/253 (49%), Gaps = 20/253 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3023 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3081
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 3082 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 3139
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG + ++ P+L+ L G +V A G +
Sbjct: 3140 QGELYTWGLGEYGRLGHGD---------NVTQLKPKLVVALAGRRVVQVACGSRDAQTLA 3190
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 3191 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 3250
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3251 TWGKGDYYRLGHG 3263
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 130/304 (42%), Gaps = 42/304 (13%)
Query: 32 SSTLQRRFAAL-WGNGDYGRLGLG-------SLESRWRPVVCSAFEKHSLKALACGGAHT 83
S+T Q+R AL W + + G S ES P + F+ +K +AC
Sbjct: 525 STTPQQRIYALGWPSLSKDQQGFSAEPTLSWSGESTAVPTLSCRFQ---IKQVACCETQM 581
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH----HSSAIT 139
L L++ G +Y L EPL + + EV IS H H AI
Sbjct: 582 LILSQEGKLYTWRLAK-----------PEAEPLPMEEVAHEVF-ISIAGHCEGRHFLAID 629
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
+ Y WG + +LG G A+ +P TK+ L + G S A+T GG +L
Sbjct: 630 SNHNAYSWGTGEDHRLGHGDTHARAVP--TKIAALEQHCVQSVYCGCSYSAAITCGGNLL 687
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIA-AAGFLHSACIDENG 257
+WG G RLGHG S P L+ L + + V +A +G HS + G
Sbjct: 688 TWGRGTYARLGHGN---------SDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 738
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
V+ +GD K+ N + +P L+ LP + V G + L+S G+LY+WG +
Sbjct: 739 LVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSLALSSEGQLYSWG--KA 796
Query: 318 GCLG 321
CLG
Sbjct: 797 TCLG 800
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 689 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 748
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 749 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSLALSSEGQLYSWGKATCLGHQLVER 806
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 807 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 862
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 21/247 (8%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
C G H L + Y+ G + +LG + ++ P +I+ L++ VQ + G +S+
Sbjct: 620 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 678
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
AIT G L WG+ + +LG G + +P T V LS ALG S+A+T
Sbjct: 679 AITCGGNLLTWGRGTYARLGHGNSDDRSLP--TLVVALSDHMVVDVALGSGDAHSLALTS 736
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG+G + L P L++ L V+ A + F S +
Sbjct: 737 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLPRVQRVFAGSQF--SLALS 785
Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
G++Y +G +++ + P L+S L + +V H L+S GE++
Sbjct: 786 SEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 845
Query: 311 TWGSNEN 317
WG N++
Sbjct: 846 GWGRNDS 852
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ RLG G +R P +A E+H ++++ CG +++ +T G + G + +
Sbjct: 637 WGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 696
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + SL L ++ VV ++ +G HS A+T +G ++ WG G+LG G
Sbjct: 697 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 756
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
+ PI VE L + ++ G + S+A++ G++ SWG LGH E S+ G
Sbjct: 757 NGSLQPI--LVESLPRV--QRVFAGSQFSLALSSEGQLYSWGKATC--LGHQLVERSVQG 810
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRL+ L+ ++ A H + +G V+ +G
Sbjct: 811 C------SVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWG 848
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ +WG N QLG G K +KV +PT + +S + A G + V+ GKV + G
Sbjct: 2985 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGE 3042
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G ++ P + L VK A +G H+ + +G+V+
Sbjct: 3043 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3093
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ +P L+ L + +V CG H+ ++S GELYTWG E G
Sbjct: 3094 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3153
Query: 320 LGIG 323
LG G
Sbjct: 3154 LGHG 3157
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 89/238 (37%), Gaps = 69/238 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4047 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4104
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4105 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4164
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4165 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4215
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4216 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4273
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 94/249 (37%), Gaps = 43/249 (17%)
Query: 92 VYATGLNDFGQLGISENIGYSLEP-LRISGLKKEVVQISTGYHHSSA---------ITVD 141
+YA G + + G+S EP L SG V +S + ++ +
Sbjct: 532 IYALGWPSLSK----DQQGFSAEPTLSWSGESTAVPTLSCRFQIKQVACCETQMLILSQE 587
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA-LGFEQSVAVTGGGKVLS 200
G+LY W L K A+ +P+ E +F A +A+ S
Sbjct: 588 GKLYTWR--------LAKPEAEPLPME---EVAHEVFISIAGHCEGRHFLAIDSNHNAYS 636
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G RLGHG + + P I LE V+ G +SA I G +
Sbjct: 637 WGTGEDHRLGHGD---------THARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLL 687
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC------GGYHTCVLTSGGELYTWGS 314
+G ++ + P+L+ L S+ +V G H+ LTS G ++ WG
Sbjct: 688 TWGRGTYARLGHGNSDDRSLPTLVVAL--SDHMVVDVALGSGDAHSLALTSEGLVFAWGD 745
Query: 315 NENGCLGIG 323
+ G LG G
Sbjct: 746 GDYGKLGNG 754
>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
Length = 892
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G F
Sbjct: 134 WGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 193
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P ++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 194 GLLGHGNDVSHWV-PKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 252
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + I +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 253 DRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 310
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 311 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 361
Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + + KL + EE+ CG YH VLTS E+YTWG NG LG G
Sbjct: 362 YGQLGNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 420
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 127/269 (47%), Gaps = 32/269 (11%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
++ ++CGG H +T+ G +Y+ G G+LG + S +P I L ++ ++
Sbjct: 111 DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVS-QPKLIDALSHMNIELVAC 169
Query: 131 GYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
G +H+ A+T+ G+LY WG + G LG G + +P L GI + G
Sbjct: 170 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGP-LEGIHVSSISCGPWH 228
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
+ VT G++ ++G G G LGHG SI PR ++ L+G++ AA G
Sbjct: 229 TALVTSAGQLFTFGDGSFGVLGHGDRESI---------SVPREVESLKGLRTVRAACGVW 279
Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
H+A + E +G+++ +GD DK G+ + P+ ++ L P +
Sbjct: 280 HTAAVVEVMAGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKEAKLVPTCVAALVEPNFCQ 337
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS G LG
Sbjct: 338 VACGHCLTVALTTSGHVYTMGSAVYGQLG 366
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E++ P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 305 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 364
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ G + P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 365 LGNTQADG--MLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 422
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
K PT VE L + G + A+
Sbjct: 423 DDKN--TPTLVEALKDKQVRSVVCGINFTAAI 452
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + ++ +V IS G H++ +T GE+Y WG+ S G+LG G + P ++
Sbjct: 102 KPLEFA-VRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCD--VSQPKLIDA 158
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
LS + + A G + AVT G + +WG G G LGHG + S + P+
Sbjct: 159 LSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGND---------VSHWVPKH 209
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG+ V + G H+A + G+++ FGD + + + P + L
Sbjct: 210 VNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGL 269
Query: 289 YSEEVVCGGYHTCVLTS------------GGELYTWGSNENGCLGIG 323
+ CG +HT + G+++TWG + G LG G
Sbjct: 270 RTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHG 316
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 100 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDV--------- 150
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +GD L GN P +
Sbjct: 151 SQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHV 210
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 211 NGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 252
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 23/227 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G + R P SAF+ + ++ CG +T+ +++G VY+ G DFG
Sbjct: 36 WGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFG 95
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + + P+R + GL+ + QIS G H A+T++ ++ WG+N NG+LGLG
Sbjct: 96 RLGHGDPSDLFIPHPIRALQGLR--IKQISCGDCHCLAVTMENKVLSWGRNQNGELGLG- 152
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K +P K+ GI K A G E SVA+T G + WG G G LG G +
Sbjct: 153 -TTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND--- 208
Query: 220 FLRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
RLI E ++G K+ + + G+ H+ I +G +Y G
Sbjct: 209 ----------RLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 245
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 128/263 (48%), Gaps = 20/263 (7%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
SA H L ++ G +HT+ L V + G + GQLG + L P ++S ++
Sbjct: 8 SASPPHVL-LISAGASHTVALLTGNVVCSWGRGEDGQLGHGDT-DDRLLPTKLSAFDGQD 65
Query: 125 VVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V ++ G ++ A + G ++Y WG G+LG G + IP P + L G+ KQ +
Sbjct: 66 IVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHP--IRALQGLRIKQIS 123
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G +AVT KVLSWG +G LG G + + P+ I EG+++K+
Sbjct: 124 CGDCHCLAVTMENKVLSWGRNQNGELGLGT---------TKDSHVPQKILAFEGIRIKMV 174
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHT 300
AAG HS I E+G +Y +G + + N P ++ +++V CG HT
Sbjct: 175 AAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI--DGDKIVMVSCGWRHT 232
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
++S G LYT G ++ G LG G
Sbjct: 233 ISISSSGGLYTHGWSKYGQLGHG 255
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G + P A + +K ++CG H L +T V + G N G+
Sbjct: 89 WGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGE 148
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ +++ + L G++ ++V + G HS AIT DG+LY WG G LGLG
Sbjct: 149 LGLGTTKDSHVPQKILAFEGIRIKMV--AAGAEHSVAITEDGDLYGWGWGRYGNLGLGDT 206
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++IP ++ G + G+ +++++ G + + G G+LGHG L
Sbjct: 207 NDRLIPEKVNID---GDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCL-V 262
Query: 221 LRSTSEYTPRLIKEL 235
R + +LI ++
Sbjct: 263 PRKVQALSDKLISQV 277
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 4/154 (2%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
++ T++ + + WG G LGLG+ + P AFE +K +A G H++ +TE G
Sbjct: 130 LAVTMENKVLS-WGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDG 188
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y G +G LG+ + L P +++ ++V +S G+ H+ +I+ G LY G +
Sbjct: 189 DLYGWGWGRYGNLGLGDT-NDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWS 247
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
GQLG G + +P KV+ LS Q L
Sbjct: 248 KYGQLGHGDFEDCL--VPRKVQALSDKLISQVIL 279
>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
Length = 1086
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 138/307 (44%), Gaps = 46/307 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 334 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 453 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 511 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGS-- 559
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P LP + EE+ CG YH VLTS E+YTWG
Sbjct: 560 --PVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGA 613
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 614 NGRLGHG 620
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 34/272 (12%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
K ++ ++CGG H +T+ G +Y+ G G+LG + +P I L ++ +
Sbjct: 309 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 367
Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ G +H+ A+T+ G+LY WG +++G LG G + + +P +V L GI + G
Sbjct: 368 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHW--VPKRVNGPLEGIHVSAISCG 425
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 476
Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
G H+A + E +G+++ +GD DK G+ R P+ ++ L P
Sbjct: 477 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 534
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ CG T LT+ G +YT GS G LG
Sbjct: 535 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLG 566
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ++R P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 505 WGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQ 564
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G + P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 565 LGNPQADG--MLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 622
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L + G + A+
Sbjct: 623 DDRS--SPTLVEALKDKQVRTVVCGINFTAAI 652
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + +K +V IS G H++ +T GE+Y WG+ S G+LG G +P P ++
Sbjct: 302 KPLEFA-VKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 358
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G SG LGHG E S + P+
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNE---------VSHWVPKR 409
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG+ V + G H+A + G+++ FGD + + + P + L
Sbjct: 410 VNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGL 469
Query: 289 YSEEVVCGGYHTCVLTS------------GGELYTWGSNENGCLGIG 323
+ CG +HT + G+++TWG + G LG G
Sbjct: 470 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHG 516
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
IP +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 300 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV--------- 350
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +G+ + L GN P +
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 410
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 411 NGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDSQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPVHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K+VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ ++ E E V V+IAA H SA + G VY++G
Sbjct: 276 PV--------HIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P+ I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLNPVHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTSFSCTDDVF 333
>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
Length = 2041
Score = 111 bits (277), Expect = 5e-22, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 121/263 (46%), Gaps = 22/263 (8%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP--LRISGLKKEVVQ 127
K + CG HT+ LTE G V+ G+ G LG + + P + ISGL +
Sbjct: 298 KQEFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLG-NGRVDDLETPTQIDISGLFFN--E 354
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
I+ G +HS A+ + ++Y WG N+ GQLG+G K +++P I + G +
Sbjct: 355 IAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQ 414
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
S +T ++ +WG G RLGHG E P+ I+ L+ V V A G
Sbjct: 415 HSACITTNKELYTWGNGDYYRLGHGM---------LLDEMEPKKIEILQDVYVLDVALGT 465
Query: 248 LHSACIDENGRVYIFGDR--AVDKMLFQEGNHARRPSLISKLPYS------EEVVCGGYH 299
+HS CI G VY +G +V M Q+ P + + S +V G H
Sbjct: 466 IHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSH 525
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
+ L+ G LY WGSN+N LG+
Sbjct: 526 SLSLSENGHLYVWGSNKNSLLGV 548
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 89/328 (27%), Positives = 150/328 (45%), Gaps = 36/328 (10%)
Query: 8 AMTKYYLKQDIKLG-SKLGICKRWISSTLQRR---FAALWGNGDYGRLGLGSLESRWRPV 63
A K+++ + K G +++ IC + T + R A +WGN GRLG +
Sbjct: 186 AFEKFFMMEKSKDGKTEINICYYYQMLTQESRPEYIAIVWGNPANGRLGAPKSKFPNESD 245
Query: 64 VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLK 122
+ F ++ + + T V + N L +E N ++P+ LK
Sbjct: 246 KQTIFNNNNPSQMDFTSRQMQQPSRTQQVQNSQYN----LNQAEPNNSDFIQPI---ALK 298
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+E V+I G+HH+ A+T +G +++WG S G LG G+ + PT+++ +SG+F +
Sbjct: 299 QEFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGR--VDDLETPTQID-ISGLFFNEI 355
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G S+A+ +V WG G+LG G + + L P+ + + K++
Sbjct: 356 AAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQL---------LPKQLTFFDRKKIQC 406
Query: 243 A--AAGFLHSACIDENGRVYIFGD----RAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G HSACI N +Y +G+ R ML E P I L Y +V
Sbjct: 407 QYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDE----MEPKKIEILQDVYVLDVA 462
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGI 322
G H+ +T+ G +Y WGS+++ LG+
Sbjct: 463 LGTIHSLCITNEGFVYAWGSSKDSVLGM 490
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/297 (24%), Positives = 131/297 (44%), Gaps = 40/297 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLNDF 100
WG + G+LG+G+ E++ P + F++ ++ L CG H+ +T +Y G D+
Sbjct: 374 WGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDY 433
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + +EP +I L+ V+ ++ G HS IT +G +Y WG + + LG+
Sbjct: 434 YRLGHGMLLD-EMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVYAWGSSKDSVLGMPT 492
Query: 160 KAAKVIPIPTKVECLSGIFTK----QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ K +P +V +S F Q A G S++++ G + WG+ ++
Sbjct: 493 QQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVWGS---------NKN 543
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ-- 273
S+LG E+T V K+ + L +CI+ + F + ++ + +
Sbjct: 544 SLLGVRLQGQEHT--------CVPQKVEQSEDLEKSCIE---KALFFNLKKEEQQMMKDE 592
Query: 274 -----EGNHARRPSLISKLPYSEE-----VVCGGYHTCVLTSGGELYTWGSNENGCL 320
E + L S + S E G +T + + G LY GSN+ G L
Sbjct: 593 KLVTFEQTTLMKTILQSTMGQSHECKYKFATLGTKNTYFIDNTGHLYACGSNQKGML 649
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 27/260 (10%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
E + P+ F ++ ++C H + +T G Y G N + QLG+ + P
Sbjct: 673 FEQSFTPIEIVYFRNTIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTP 732
Query: 116 LRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+ + G +K ++ TG S+ +T GE++ +G + G LG K VI P +
Sbjct: 733 ILLEGAIEQKVIIMAITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMIND 792
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
+ + A + A+ ++ +WG G+LG + R E + K
Sbjct: 793 IPSMI--NLACSNQTMFAIDQKQQLWAWGNNQFGQLG-------ISLQRDEEEINLQTNK 843
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
++ ++ A L S +N YI ++Q + R I+ + ++V
Sbjct: 844 QVSSEFLEWKAQ--LKSL---KNPERYI---------VYQPDKPSTRS--ITGEAFVDQV 887
Query: 294 VCGGYHTCVLTSGGELYTWG 313
CG YHTC++T+ EL T G
Sbjct: 888 SCGLYHTCIITTNQELLTCG 907
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 83/383 (21%), Positives = 138/383 (36%), Gaps = 91/383 (23%)
Query: 17 DIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV------VCSAFEK 70
D+ LG+ +C F WG+ LG+ + + + + + + +F
Sbjct: 460 DVALGTIHSLC------ITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRD 513
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI----------------SENIGYS-L 113
S +A G +H+L L+E G +Y G N LG+ SE++ S +
Sbjct: 514 ASFYQVAAGTSHSLSLSENGHLYVWGSNKNSLLGVRLQGQEHTCVPQKVEQSEDLEKSCI 573
Query: 114 EPLRISGLKKE---------------------VVQISTGYHHSSA-------------IT 139
E LKKE ++Q + G H I
Sbjct: 574 EKALFFNLKKEEQQMMKDEKLVTFEQTTLMKTILQSTMGQSHECKYKFATLGTKNTYFID 633
Query: 140 VDGELYMWGKNSNGQLGLG----KKAAKVIP-------------IPTKVECLSGIFTKQA 182
G LY G N G L +K + IP P ++ +
Sbjct: 634 NTGHLYACGSNQKGMLCKNPHKKQKFKQFIPQKDPPDILFEQSFTPIEIVYFRNTIIRYI 693
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVK 241
+ + +AVT G WG+ +LG LGF +S +TP L++ +E +
Sbjct: 694 SCQYNHCIAVTAKGNAYCWGSNQYNQLG-------LGF-QSDHVFTPILLEGAIEQKVII 745
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGGYH 299
+A G SA + + G V+ FG + + N P +I+ +P + C
Sbjct: 746 MAITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIPSMINLACSNQT 805
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
+ +L+ WG+N+ G LGI
Sbjct: 806 MFAIDQKQQLWAWGNNQFGQLGI 828
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 72/331 (21%), Positives = 128/331 (38%), Gaps = 56/331 (16%)
Query: 40 AALWGNGDYGRLGLG-SLESRWRPVVCS-AFEKHSLKALACGGAHTLFLTETGCVYATGL 97
A WG+ Y +LGLG + + P++ A E+ + G + LT+ G V++ G
Sbjct: 709 AYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAITGEKFSALLTDQGEVWSFGT 768
Query: 98 NDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
++FG LG +N +EP I+ + ++ ++ AI +L+ WG N GQLG
Sbjct: 769 SEFGVLGHELKNFYVIMEPRMINDIP-SMINLACSNQTMFAIDQKQQLWAWGNNQFGQLG 827
Query: 157 LG-----------------------KKAAKVIPIPTK----------VECLSG-IFTKQA 182
+ K K + P + ++G F Q
Sbjct: 828 ISLQRDEEEINLQTNKQVSSEFLEWKAQLKSLKNPERYIVYQPDKPSTRSITGEAFVDQV 887
Query: 183 ALGFEQSVAVTGGGKVLSWG----AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+ G + +T ++L+ G AG + E + ++ L E
Sbjct: 888 SCGLYHTCIITTNQELLTCGLAKYAGHQSQEPEDPEQQQAQQAQFIDAFSSTL--EHSSK 945
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDK-------MLFQEGNHARRPSLISKLPYSE 291
K K+ A H+ + + + G ++ LF++G + P + + +
Sbjct: 946 KFKLVACHEYHTVAVTVSSDLVFLGPEGKERGLHEKFANLFRDGK--QMPVELQNIKF-- 1001
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
V CG H +L G+ YTWG+ G LG+
Sbjct: 1002 -VACGPNHALILNDQGQTYTWGATMGGRLGL 1031
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++A+T G V WG G G LG+G R TP I ++ G+ A
Sbjct: 307 GHHHTMALTEEGAVFIWGMGSQGCLGNG---------RVDDLETPTQI-DISGLFFNEIA 356
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS----KLPYSEEVVCGGYHT 300
AG HS + +N +VY +G ++ + P ++ K + + CG H+
Sbjct: 357 AGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHS 416
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
+T+ ELYTWG+ + LG G
Sbjct: 417 ACITTNKELYTWGNGDYYRLGHG 439
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--SKLPYSEEVVCGG 297
VKI G H+ + E G V+I+G + + + P+ I S L + E+ G
Sbjct: 302 VKIVC-GHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQIDISGL-FFNEIAAGA 359
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
YH+ L ++Y WG N G LGIG
Sbjct: 360 YHSLALAKNNQVYGWGVNNRGQLGIG 385
>gi|417781462|ref|ZP_12429211.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
weilii str. 2006001853]
gi|410778193|gb|EKR62822.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
weilii str. 2006001853]
Length = 506
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 138/299 (46%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + + A G H L L G +
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRTAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTI 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S+ P+ + GL+ +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLR-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A IP KVE L I KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANTAQSIPVKVEGLPEI--KQIANGRDHILALASDGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L + AG S I ++G V +G +
Sbjct: 377 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + ++V+ CG H VL GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTQKVYEPNKAVVGIDDVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 26/263 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY TG N+FGQLG + G + + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSIRNISSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIPIPTKVECLSGIFTKQAALG 185
S AI +G +Y WG N+ GQLG+G + A P PT V + A G
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQP-PTLVPGIDDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAA 244
F ++ + G ++++G G+LG+G L + S P + L V IA
Sbjct: 247 FNHALILKSDGTIVAFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLRDVIQVIA- 300
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
G HSA + ENG VY++G + N A+ P + LP +++ G H
Sbjct: 301 -GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANTAQSIPVKVEGLPEIKQIANGRDHI 359
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L S G +Y+WG N +G LGIG
Sbjct: 360 LALASDGRIYSWGLNASGQLGIG 382
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKV 171
L+KEV ++S G HS + +GE+Y G+N+ GQLG G VI +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPR 230
+S I Q S+A+ G+V +WG G+LG G ++ R+ + P
Sbjct: 178 RNISSIHFNQ-----NNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQPPT 232
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLIS 285
L+ ++ + A GF H+ + +G + FG V ++ + + P +
Sbjct: 233 LVPGID--DAVMGAYGFNHALILKSDGTIVAFGQNNVGQLGNGANDLNADSFSMNPVAVV 290
Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 291 GLRDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNG 328
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 74/176 (42%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L ++ PV + +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANTAQSIPVKVEGLPE--IKQIANGRDHILALASDGRIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P+ L + G S +I GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + + P K V + + G + + G G++ WG G LG
Sbjct: 434 AIGETNTQKVYEPNKAVVGIDDVI--HFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 23/227 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG G+ G+LG G + R P SAF+ + ++ CG +T+ +++G VY+ G DFG
Sbjct: 128 WGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFG 187
Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG + + P+R + GL+ + QIS G H A+T++ ++ WG+N NG+LGLG
Sbjct: 188 RLGHGDPSDLFIPHPIRALQGLR--IKQISCGDCHCLAVTMENKVLSWGRNQNGELGLG- 244
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K +P K+ GI K A G E SVA+T G + WG G G LG G +
Sbjct: 245 -TTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND--- 300
Query: 220 FLRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
RLI E ++G K+ + + G+ H+ I +G +Y G
Sbjct: 301 ----------RLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHG 337
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 116/237 (48%), Gaps = 19/237 (8%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGK 149
V + G + GQLG + L P ++S +++V ++ G ++ A + G ++Y WG
Sbjct: 125 VCSWGRGEDGQLGHGDT-DDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGW 183
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
G+LG G + IP P + L G+ KQ + G +AVT KVLSWG +G L
Sbjct: 184 GDFGRLGHGDPSDLFIPHP--IRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 241
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + + P+ I EG+++K+ AAG HS I E+G +Y +G
Sbjct: 242 GLGT---------TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGN 292
Query: 270 MLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + N P ++ +++V CG HT ++S G LYT G ++ G LG G
Sbjct: 293 LGLGDTNDRLIPEKVNI--DGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHG 347
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G + P A + +K ++CG H L +T V + G N G+
Sbjct: 181 WGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGE 240
Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG+ +++ + L G++ ++V + G HS AIT DG+LY WG G LGLG
Sbjct: 241 LGLGTTKDSHVPQKILAFEGIRIKMV--AAGAEHSVAITEDGDLYGWGWGRYGNLGLGDT 298
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++IP ++ G + G+ +++++ G + + G G+LGHG L
Sbjct: 299 NDRLIPEKVNID---GDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCL-V 354
Query: 221 LRSTSEYTPRLIKEL 235
R + +LI ++
Sbjct: 355 PRKVQALSDKLISQV 369
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LGLG+ + P AFE +K +A G H++ +TE G +Y G +G
Sbjct: 233 WGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGN 292
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ + L P +++ ++V +S G+ H+ +I+ G LY G + GQLG G
Sbjct: 293 LGLGDT-NDRLIPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFED 351
Query: 163 KVIPIPTKVECLSGIFTKQAAL 184
+ +P KV+ LS Q L
Sbjct: 352 CL--VPRKVQALSDKLISQVIL 371
>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 139/307 (45%), Gaps = 46/307 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ ++CG HT +T +G +Y G +F
Sbjct: 332 WGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNF 391
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P +I+G + V I+ G H++ +T G+L+ +G + G LG G
Sbjct: 392 GLLGHGNEVSHWI-PKKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHG 450
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 451 DRGS--VTMPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK 508
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L + G + + +G VY G
Sbjct: 509 GRLGHGDKETKL---------VPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGS-- 557
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P K+P + EE+ CG YH VLTS E+YTWG
Sbjct: 558 --PVYGQLGN----PHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGA 611
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 612 NGRLGHG 618
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 130/272 (47%), Gaps = 38/272 (13%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-I 128
++ +ACGG H +T+ G ++ G G+L G+ ++ L+P + L ++ +
Sbjct: 309 DVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDV---LQPKLVDALGNTNIELV 365
Query: 129 STGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
S G +H+ A+T+ G+LY WG + G LG G + + IP K+ L GI A G
Sbjct: 366 SCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW--IPKKINGPLEGIHVSSIACG 423
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 424 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVT---------MPREVESLKGLRTVRAAC 474
Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
G H+A + E +G+++ +GD DK G+ + P+ ++ L P
Sbjct: 475 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKETKLVPTCVAALVDPN 532
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS G LG
Sbjct: 533 FCRVSCGHSMTVALTTSGHVYTMGSPVYGQLG 564
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E++ P +A + ++CG + T+ LT +G VY G +GQ
Sbjct: 503 WGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQ 562
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG G P+R+ G K V +I+ G +H + +T E+Y WGK +NG+LG G
Sbjct: 563 LGNPHADGKV--PVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 620
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K A G + A+
Sbjct: 621 DDRN--SPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + VT G++ +WG GRLGHG +S +L
Sbjct: 298 LPKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVL-------- 349
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+L+ L +++ + G H+ + +G +Y +GD + L GN P I
Sbjct: 350 -QPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKI 408
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT V+TS G+L+T+G G LG G
Sbjct: 409 NGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHG 450
>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
Length = 1132
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 138/307 (44%), Gaps = 46/307 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 380 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 439
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 440 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 498
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 499 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 556
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 557 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGS-- 605
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P LP + EE+ CG YH VLTS E+YTWG
Sbjct: 606 --PVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGA 659
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 660 NGRLGHG 666
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 34/272 (12%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
K ++ ++CGG H +T+ G +Y+ G G+LG + +P I L ++ +
Sbjct: 355 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 413
Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ G +H+ A+T+ G+LY WG +++G LG G + + +P +V L GI + G
Sbjct: 414 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHW--VPKRVNGPLEGIHVSAISCG 471
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 472 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 522
Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
G H+A + E +G+++ +GD DK G+ R P+ ++ L P
Sbjct: 523 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 580
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ CG T LT+ G +YT GS G LG
Sbjct: 581 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLG 612
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ++R P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 551 WGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQ 610
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G + P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 611 LGNPQADG--MLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 668
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L + G + A+
Sbjct: 669 DDRS--SPTLVEALKDKQVRTVVCGINFTAAI 698
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + +K +V IS G H++ +T GE+Y WG+ S G+LG G +P P ++
Sbjct: 348 KPLEFA-VKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 404
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G SG LGHG E S + P+
Sbjct: 405 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNE---------VSHWVPKR 455
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG+ V + G H+A + G+++ FGD + + + P + L
Sbjct: 456 VNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGL 515
Query: 289 YSEEVVCGGYHTCVLTS------------GGELYTWGSNENGCLGIG 323
+ CG +HT + G+++TWG + G LG G
Sbjct: 516 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHG 562
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
IP +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 346 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV--------- 396
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +G+ + L GN P +
Sbjct: 397 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 456
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 457 NGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 498
>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
Length = 1090
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG+ GRLG G P + A + + +ACG H+ +T +G ++ G + +
Sbjct: 331 WGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSY 390
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG +I + P R+ G + V ++ G H++ +T G+L+ +G + G LG G
Sbjct: 391 GLLGHGNDISH-WTPKRVGGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHG 449
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
K + + +P +VE L G+ T + A G + AV GK+ +WG G G
Sbjct: 450 DK--RSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKG 507
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L K A G + + NGRV+ G
Sbjct: 508 RLGHGDKEQKL---------VPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLY 558
Query: 268 DKMLFQEGNHARRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + + P L+ +L + EE+ CG YH VLT+ E+YTWG NG LG G
Sbjct: 559 GQLGDVRAD-GKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHG 616
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I+ G H++ +T GE++ WG S G+LG G + P VE L+ T+ A
Sbjct: 308 DVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVD--VAHPKLVEALATTNTEFVA 365
Query: 184 LGFEQSVAVTGGGKVLSWGAGGS--GRLGHGQESSILGFLRSTSEYTPRLI-KELEGVKV 240
G S AVT G + +WG G G LGHG + S +TP+ + LEG++V
Sbjct: 366 CGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGND---------ISHWTPKRVGGPLEGIRV 416
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
A G H+A + G+++ FGD + + P + L + V CG +
Sbjct: 417 SSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGVW 476
Query: 299 HTCVLT-----------SGGELYTWGSNENGCLGIG 323
HT + S G+L+TWG + G LG G
Sbjct: 477 HTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHG 512
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E + P +A ++ K +ACG T+ LT G V+ G + +GQ
Sbjct: 501 WGDGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQ 560
Query: 103 LGISENIGYSLEPLRISGL------KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
LG G ++ GL + V +I+ G +H + +T E+Y WGK +NG+LG
Sbjct: 561 LGDVRADG------KLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLG 614
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALG 185
G + PT VE L K A G
Sbjct: 615 HGDVMDRN--TPTLVEALKEKQVKSVACG 641
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 21/189 (11%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++++WG++ +G G K + P +E + A G + VT G+V
Sbjct: 275 GDVFLWGES----VGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFC 330
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG GRLGHG + + P+L++ L + A G HS + +G ++
Sbjct: 331 WGDESGGRLGHGVDVDVA---------HPKLVEALATTNTEFVACGEYHSCAVTLSGDLF 381
Query: 261 IFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWGS 314
+GD L GN P + P V CG +HT ++TS G+L+T+G
Sbjct: 382 TWGDGTHSYGLLGHGNDISHWTPKRVGG-PLEGIRVSSVACGVWHTALVTSAGQLFTFGD 440
Query: 315 NENGCLGIG 323
G LG G
Sbjct: 441 GTFGVLGHG 449
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 701 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 759
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 760 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 817
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 818 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 868
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 869 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 928
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 929 SWGSNDQ 935
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 639 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 687
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +++I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 688 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 743
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 744 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 791
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 792 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 851
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 852 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 889
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 716 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 774
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 775 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 833
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 834 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 891
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 892 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 931
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 772 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 831
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 832 GKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 890
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 891 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGS 932
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 826 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 885
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 886 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 937
>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Papio anubis]
gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
protein 1 [Macaca fascicularis]
gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
Length = 531
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 2752 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 2811
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 2812 LGHGDNT-TQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 2870
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 2871 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 2926
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 2927 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 2977
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 2978 NKKPALVIGLDAVFVNRVACGSSHS 3002
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 129/287 (44%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 2699 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 2758
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 2759 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 2817
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2818 TTQLKP--KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 2870
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 2871 ----SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 2926
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P I L V G H +T G++Y WG N++G G G
Sbjct: 2927 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 2973
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 126/253 (49%), Gaps = 20/253 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 2681 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 2739
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 2740 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 2797
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+L+ L G +V A G +
Sbjct: 2798 QGELYTWGLGEYGRLGHGD---------NTTQLKPKLVTALAGRRVVQVACGSRDAQTLA 2848
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 2849 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 2908
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2909 TWGKGDYYRLGHG 2921
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 117/271 (43%), Gaps = 34/271 (12%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
ES P + F+ +K +AC L L++ G +Y L EPL
Sbjct: 215 ESAGVPTLSCRFQ---IKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPL 260
Query: 117 RISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ + +V IS H H AI + Y WG + +LG G A+ +P TK+
Sbjct: 261 PMEEVAHDVF-ISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP--TKIA 317
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + G S A+T GG +L+WG G RLGHG S P L+
Sbjct: 318 ALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGN---------SDDRSLPTLV 368
Query: 233 KEL-EGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
L + + V +A +G HS + G V+ +GD K+ N + +P L+ LP
Sbjct: 369 VALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRV 428
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ V G + L+S G+LYTWG + CLG
Sbjct: 429 QRVFAGSQFSVALSSEGQLYTWG--KATCLG 457
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 346 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 405
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 406 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 463
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 464 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 519
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 21/247 (8%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
C G H L + Y+ G + +LG + ++ P +I+ L++ VQ + G +S+
Sbjct: 277 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 335
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
AIT G L WG+ + +LG G + +P T V LS ALG S+A+T
Sbjct: 336 AITCGGNLLTWGRGTYARLGHGNSDDRSLP--TLVVALSDHMVVDVALGSGDAHSLALTS 393
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG+G + L P L++ L V+ A + F S +
Sbjct: 394 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLPRVQRVFAGSQF--SVALS 442
Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
G++Y +G +++ + P L+S L + +V H L+S GE++
Sbjct: 443 SEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 502
Query: 311 TWGSNEN 317
WG N++
Sbjct: 503 GWGRNDS 509
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 128 ISTGYHHSSAIT---VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ST + ++A + + +WG N QLG G K +KV +PT + +S + A
Sbjct: 2624 VSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAG 2681
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+ GKV + G G +GRLG G ++ P + L VK A
Sbjct: 2682 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVA 2732
Query: 245 --AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
+G H+ + +G+V+ +G+ K+ +P L+ L + +V CG H+
Sbjct: 2733 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHS 2792
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
++S GELYTWG E G LG G
Sbjct: 2793 AAISSQGELYTWGLGEYGRLGHG 2815
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 29/193 (15%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA-LGFEQSVAVTGGG 196
++ +G+LY W L K A+ +P+ E +F A +A+
Sbjct: 241 LSQEGKLYTWR--------LAKPEAEPLPM---EEVAHDVFISIAGHCEGRHFLAIDSNH 289
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
SWG G RLGHG + + P I LE V+ G +SA I
Sbjct: 290 NAYSWGTGEDHRLGHGD---------THARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 340
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC------GGYHTCVLTSGGELY 310
G + +G ++ + P+L+ L S+ +V G H+ LTS G ++
Sbjct: 341 GNLLTWGRGTYARLGHGNSDDRSLPTLVVAL--SDHMVVDVALGSGDAHSLALTSEGLVF 398
Query: 311 TWGSNENGCLGIG 323
WG + G LG G
Sbjct: 399 AWGDGDYGKLGNG 411
>gi|79295482|ref|NP_001030623.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|332640300|gb|AEE73821.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 310
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 27/291 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + V A E +S++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P R+ L ++ Q + G H A+ G Y WG N GQ G
Sbjct: 70 LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ ++E+GR+ +G+ ++ +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L ++ GG+H+ LT GE+Y WG E+G LG+G
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLG 283
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E +++ +A G H L L E G + A G N++GQLG + S P+ + GL
Sbjct: 189 PVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS-HPVPVQGL 245
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
+V I+ G HS+A+T GE+Y WG+ +G+LGLG +P KV L+
Sbjct: 246 DDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLA 300
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + PV + +L +A GG H+ LT+ G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLKKE-VVQI 128
LG+ +N S + P +++ L +E ++Q+
Sbjct: 280 LGLGDNDKSSKMVPQKVNLLAEEDIIQV 307
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 62/170 (36%), Gaps = 53/170 (31%)
Query: 198 VLSWGAGGSGRLGHG-------------------------------------------QE 214
+++WG+G G+LG G +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 215 SSILGFLRST-SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-----D 268
LG T +E P +K L VK+ AA G H +D+ GR Y +G +
Sbjct: 67 RGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126
Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGS 314
+ + G RR +I K + +V GG H+ VLT G ++TWG
Sbjct: 127 PLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 17/273 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP V + + +ACGGAH+ +T +G +Y G +G+
Sbjct: 3292 WGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGR 3351
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV--DGELYMWGKNSNGQLGLGK 159
LG ++ L P LK V+ ++ G S + + D ++ WG G+LG G
Sbjct: 3352 LGHGDSED-QLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRG- 3409
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P KV+ LS I + G + S+A+T G V +WG G RLGHG + +
Sbjct: 3410 -GSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHV-- 3466
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G VY +GD ++ N +
Sbjct: 3467 -------RRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQ 3519
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
RP +++ L + V CG HT ++ L+
Sbjct: 3520 RPRIVTALQDKKITNVACGSAHTVAWSTSKPLH 3552
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 133/263 (50%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 2317 WGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGR 2376
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV--DGELYMWGKNSNGQLGLGK 159
LG ++ L P + L K V+Q++ G + +T+ +G +Y WG G+LG G
Sbjct: 2377 LGHGDST-TQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRG- 2434
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P VE L+G Q G + S+A+T G+V +WG G RLGHG +S +
Sbjct: 2435 -GSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHV-- 2491
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P++ + L+G K+ A G LH + + G+V+ +GD + +
Sbjct: 2492 -------RKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNK 2544
Query: 280 RPSLISKLP--YSEEVVCGGYHT 300
+P+L+ L V CG H+
Sbjct: 2545 KPALVQGLEGVRITRVACGSSHS 2567
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 131/287 (45%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G +S P + + + +K +A GG H L L+ G VY+ G + G
Sbjct: 3239 GYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDG 3298
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N P I L+ KEV+ I+ G HS+ +T GELY WGK G+LG G
Sbjct: 3299 KLGHG-NRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDS 3357
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P + L G A G Q++ ++ V SWG G G+LG G
Sbjct: 3358 EDQLRP--KMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGG----- 3410
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P+ + L + V G S + ++G VY +G ++ +H
Sbjct: 3411 ----SDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHV 3466
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RRP ++ L + + G H + GE+YTWG N+ G LG G
Sbjct: 3467 RRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDG 3513
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 148/294 (50%), Gaps = 29/294 (9%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC-GGAHTLFL-TETGCVYATGLND 99
+WG D +LG G S+ + V + F SLK + C GG+ +LF+ T G VYA G
Sbjct: 2210 VWGLNDKDQLG-GPRGSKIKTPVLNEFLS-SLKVVCCAGGSKSLFVVTAEGKVYACGEGT 2267
Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQ 154
G+LG+ S+N+ P +++GL + VV+ + +G H+ A+TVDG+++ WG+ +G+
Sbjct: 2268 NGRLGLGSSQNVDI---PKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2324
Query: 155 LG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
LG L + + P +E L + A G S AVT G++ +WG G GRLGHG
Sbjct: 2325 LGHLSRMNCEK---PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGD 2381
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKML 271
ST++ P+L+K L G +V A G + + + G VY +GD K+
Sbjct: 2382 ---------STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLG 2432
Query: 272 FQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +L ++ CG + LT G+++TWG + LG G
Sbjct: 2433 RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHG 2486
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 133/287 (46%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLGS ++ P + ++ +K +A GG H + LT G V++ G D G
Sbjct: 2264 GEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDG 2323
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P + LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2324 KLGHLSRMNCE-KPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDS 2382
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V+ L G Q A G Q++ +T G V SWG G G+LG G
Sbjct: 2383 TTQLRP--KLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGG----- 2435
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P ++ L G V G S + + G+V+ +G ++ +H
Sbjct: 2436 ----SEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHV 2491
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P + L + V G H +T G+++ WG N++G G G
Sbjct: 2492 RKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDG 2538
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 138/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG +E V + SL+ + GG TLF +T G +YATG
Sbjct: 3186 WGHNHRGQLG--GIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGAS 3243
Query: 101 GQLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S + LE ++ +KK V +++G H+ A++V+GE+Y WG+ +G+LG
Sbjct: 3244 GRLGIGGTDSVSTPTLLESIQHVHIKK--VAVNSGGKHALALSVEGEVYSWGEGEDGKLG 3301
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + P +E L G A G S VT G++ +WG G GRLGHG
Sbjct: 3302 HGNRTQ--CDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGD--- 3356
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P++ L+G +V A +G + CI ++ V+ +GD K+
Sbjct: 3357 ------SEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGG 3410
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P + L +V CG + LT G +YTWG + LG G
Sbjct: 3411 SDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHG 3461
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 94/186 (50%), Gaps = 15/186 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG G + AKV +PT +E L+ + Q G + AVT GK+ +
Sbjct: 3181 GTIYGWGHNHRGQLG-GIEGAKV-KVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYAT 3238
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G SGRLG G S+ TP L++ ++ V +K A +G H+ + G V
Sbjct: 3239 GYGASGRLGIGGTDSV---------STPTLLESIQHVHIKKVAVNSGGKHALALSVEGEV 3289
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ RP +I L E ++ CGG H+ +TS GELYTWG
Sbjct: 3290 YSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRY 3349
Query: 318 GCLGIG 323
G LG G
Sbjct: 3350 GRLGHG 3355
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 15/194 (7%)
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H + + ++++WG N QLG G + +K I P E LS + A G + VT
Sbjct: 2198 HGGSREIQTKVFVWGLNDKDQLG-GPRGSK-IKTPVLNEFLSSLKVVCCAGGSKSLFVVT 2255
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
GKV + G G +GRLG G ++ P+ + L VK A +G H+
Sbjct: 2256 AEGKVYACGEGTNGRLGLGSSQNV---------DIPKQVNGLSQYVVKKVAVHSGGRHAM 2306
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ +G+V+ +G+ K+ + +P L+ L ++ CG H+ +TS GEL
Sbjct: 2307 ALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGEL 2366
Query: 310 YTWGSNENGCLGIG 323
YTWG E G LG G
Sbjct: 2367 YTWGLGEYGRLGHG 2380
>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
tropicalis]
gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
Length = 729
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 47/301 (15%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LG+ + + +P A + + ACG HTL TE G +Y++G N G
Sbjct: 60 VFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEG 119
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G S + + + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K
Sbjct: 120 QLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEK- 178
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P KV+ +G + G+ S VT G++ ++G +G+LG L
Sbjct: 179 -GTIYCTPQKVD--TGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPP 228
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------------- 263
+ P+ + L G KV + + G H+ + E VY FG
Sbjct: 229 DKIKKHKKPQRVLGLSG-KVTMVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETH 286
Query: 264 -DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+AVD + + K+ Y V CG HT ++T G LYT+G +G LG+
Sbjct: 287 IPKAVDALTKK------------KIRY---VTCGENHTAIITEKGLLYTFGDGRHGKLGL 331
Query: 323 G 323
G
Sbjct: 332 G 332
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 123/264 (46%), Gaps = 42/264 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
++CG HT+ +T G +Y G N++GQLG+ S +P + LK E VV + G HH
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAIS-KPTCVKALKSEKVVLAACGRHH 100
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G+LY G NS GQLGLG A + T + +S FT KQ + G S
Sbjct: 101 TLVYTEQGKLYSSGGNSEGQLGLGDTAGR-----TSFQEIS-FFTAQYKIKQLSAGSNMS 154
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T GK+ WG G+ LG + T TP+ + G + + G+ H
Sbjct: 155 AALTVDGKLFMWGDNSEGQ---------LGLEKGTIYCTPQKVD--TGKPIAWISCGYYH 203
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----------CGGYH 299
SA + ++G +Y FG+ + G P I K + V+ CGG H
Sbjct: 204 SAFVTQDGELYTFGEP-------ENGKLGLPPDKIKKHKKPQRVLGLSGKVTMVSCGGEH 256
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
T +T E+YT+G + G LG G
Sbjct: 257 TIAVTE-KEVYTFGLGQFGQLGHG 279
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + + +IS G H+ +T +G+LY++G N+ GQLG+
Sbjct: 19 FGKSKFAENI-----PSKFWLKNDKPARISCGDEHTVLVTGNGKLYVFGSNNWGQLGV-- 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+A I PT V+ L AA G ++ T GK+ S G G+LG G +
Sbjct: 72 EAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTS 131
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + S +T + K+K +AG SA + +G+++++GD + ++ ++G
Sbjct: 132 F-QEISFFTAQY-------KIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGTIYC 183
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P + + CG YH+ +T GELYT+G ENG LG+
Sbjct: 184 TPQKVDTGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLGL 226
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHH 134
++CGG HT+ +TE VY GL FGQLG I + P + L KK++ ++ G +H
Sbjct: 250 VSCGGEHTIAVTEKE-VYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENH 308
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKK--AAKVIPI 167
++ IT G LY +G +G+LGLG++ + +PI
Sbjct: 309 TAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPI 343
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG + +++ P++CS F K +++++ACGG H L
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVF 366
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 43 WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G G +G+LG G+ E+ P A K ++ + CG HT +TE G +Y G
Sbjct: 268 FGLGQFGQLGHGTFIFETHI-PKAVDALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRH 326
Query: 101 GQLGI-SENIGYSLEPLRISGLKKEVVQ 127
G+LG+ EN P+ S K VQ
Sbjct: 327 GKLGLGEENFTNQFVPILCSNFLKFTVQ 354
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 23/290 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G + P + + S+++ A GG H++ L+ G V+ G FG
Sbjct: 113 IWGKGDGGRLGFGQEYPAFLPTLNPNLD--SIRSTALGGVHSVALSSLGQVFTWGYGGFG 170
Query: 102 QLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNS-NGQLGLGK 159
LG S L P + G ++ I+T H++AIT GELY WG++ +G+LGLG
Sbjct: 171 ALGHSV-YHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGP 229
Query: 160 KAAKV----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ IP+KV+ L + GF V +T G++ +WGA + LG G +
Sbjct: 230 NCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMV-LTQEGQLWNWGANSNYELGRGDK- 287
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ P+ I L+ V++ A+G HS + ++G+V +G ++
Sbjct: 288 --------VGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSI 339
Query: 276 NHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ + P++I L E V+ CGG + +T G+LY WG+ ++ LG+
Sbjct: 340 ENQKIPTVIEAL-ADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGV 388
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 106/213 (49%), Gaps = 24/213 (11%)
Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
SGL + V IS G HSS + VDG+L++WGK G+LG G++ +P T L I
Sbjct: 89 SGLTE--VGISCGLFHSS-LVVDGKLWIWGKGDGGRLGFGQEYPAFLP--TLNPNLDSI- 142
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+ ALG SVA++ G+V +WG GG G LGH E PR+++
Sbjct: 143 -RSTALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHR---------ELLPRMVEGSWNA 192
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-------FQEGNHARRPSLISKLPYSE 291
K++ A H+A I E+G +Y +G D L EG PS + LP
Sbjct: 193 KIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPV 252
Query: 292 EVV-CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V CGG+ T VLT G+L+ WG+N N LG G
Sbjct: 253 AAVSCGGFFTMVLTQEGQLWNWGANSNYELGRG 285
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 122/255 (47%), Gaps = 20/255 (7%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
S+L + F WG G +G LG P + ++ +A G HT +TE+G +
Sbjct: 156 SSLGQVFT--WGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGEL 213
Query: 93 YATGLND-FGQLGISENIGYS-----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
Y G + G+LG+ N G + P ++ L V +S G + +T +G+L+
Sbjct: 214 YTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWN 273
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG NSN +LG G K P P + L + Q A G S+A+T GKVLSWG G
Sbjct: 274 WGANSNYELGRGDKVGGWKPQP--IPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQH 331
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH SSI ++ P +I+ L V A G SA I +NG++Y++G+ A
Sbjct: 332 GQLGH---SSI------ENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGN-A 381
Query: 267 VDKMLFQEGNHARRP 281
D L G +P
Sbjct: 382 KDSQLGVPGLPETQP 396
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG LG G W+P + + + +A GG H+L LT+ G V + G GQ
Sbjct: 274 WGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQ 333
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S +I P I L E V+ I+ G S+AIT +G+LYMWG + QLG+
Sbjct: 334 LGHS-SIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGV-PGL 391
Query: 162 AKVIPIPTKVECL 174
+ P+P +V+ L
Sbjct: 392 PETQPLPVEVKFL 404
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP----------RL----IKELEGVKVKI 242
++LSWG G SG+LG G E L + + P RL ++ G+
Sbjct: 36 QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVG 95
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
+ G HS+ + +G+++I+G ++ F + A P+L L GG H+
Sbjct: 96 ISCGLFHSSLV-VDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLDSIRSTALGGVHSVA 154
Query: 303 LTSGGELYTWGSNENGCLG 321
L+S G+++TWG G LG
Sbjct: 155 LSSLGQVFTWGYGGFGALG 173
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 110 bits (276), Expect = 7e-22, Method: Composition-based stats.
Identities = 91/283 (32%), Positives = 136/283 (48%), Gaps = 21/283 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G L R PV S+ A+A GG H + G ++ GLN +GQ
Sbjct: 949 WGLNSYGQLGGGPLSYRLLPVQVQGL--MSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQ 1006
Query: 103 LGISENIGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + SL P+++ GL V I+ G+ H+ A+ DG ++ WG N+ GQLG G
Sbjct: 1007 LG-GGPLSQSLTPVQVQVQGLTG-VAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTT 1064
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P+ +V+ L+G+ A G +VA+ G V +WG G+LG G
Sbjct: 1065 AQSLTPV--QVQGLTGVTAISA--GDAHTVALRRDGTVWAWGRNSWGQLGDGT------- 1113
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T TP ++ L GV AAG LH+ + ++G V+ +G + ++ H
Sbjct: 1114 --TTHRATPVQVQGLTGVIA--IAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRAT 1169
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + G HT L G ++ WG N+ G LG G
Sbjct: 1170 PVQVQGLTGVIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDG 1212
Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats.
Identities = 85/281 (30%), Positives = 135/281 (48%), Gaps = 21/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN D G+LG G+ R+ PV A+A G HT+ ++ G V+ G N GQ
Sbjct: 97 WGNNDDGQLGDGTTTRRFSPVQVMT----GATAIAAGIYHTVAASQDGTVWTWGRNSSGQ 152
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG +I P+++ GL V ++ G +HS+A+ G ++ WG N GQLG G
Sbjct: 153 LGDGTSI-QRFSPVQVQGLTG-VTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQ 210
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V+ L+G+ A ++VA+ G V +WG SG+LG G
Sbjct: 211 RLTPV--QVQGLTGVIAISA--NDSETVALRQDGTVWAWGNNSSGQLGDGT--------- 257
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T +TP + L GV A GF + + ++G ++ +G + ++ + RP
Sbjct: 258 TTVRFTPVQVLGLTGVTAIAAGGGF--AVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPE 315
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + G HT L G L+ WG+N +G LG G
Sbjct: 316 QVQGLTGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDG 356
Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats.
Identities = 84/281 (29%), Positives = 133/281 (47%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV + A+A G HT+ L + G V+A G N +GQ
Sbjct: 1101 WGRNSWGQLGDGTTTHRATPVQVQGLT--GVIAIAAGSLHTVALRQDGTVWAWGRNSWGQ 1158
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ GL V+ I+ G H+ A+ DG ++ WG N GQLG G
Sbjct: 1159 LG-DGTTTHRATPVQVQGLTG-VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTR 1216
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P +V+ L+G+ T A G+ + AV G +WG G+LG G
Sbjct: 1217 RLTP--AQVQGLTGVTT--IAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGT--------- 1263
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T TP ++ L GV AAG+ H+ + E+G V+ +G+ + ++ P
Sbjct: 1264 FTDRATPVQVQGLTGVSA--LAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPV 1321
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + + G +HT ++ G + WG N G +G G
Sbjct: 1322 QVEALTGAFSLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDG 1362
Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats.
Identities = 85/281 (30%), Positives = 129/281 (45%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG G+ R+ PV + A+A GG + L + G ++A G N GQ
Sbjct: 245 WGNNSSGQLGDGTTTVRFTPVQVLGLT--GVTAIAAGGGFAVALRQDGTLWAWGSNSRGQ 302
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G S P ++ GL V I+ H+ A+ DG L+ WG NS+GQLG G
Sbjct: 303 LGNGTTFG-SYRPEQVQGLTG-VTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTV 360
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ L+G+ A G+ +VA G V +WG G+LG G
Sbjct: 361 RFTPV--QVQGLTGV--TAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGT--------- 407
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T TP ++ L GV AAG+L++ ++G V+ +GD ++ + P
Sbjct: 408 TTRRLTPVQVQGLTGVTA--IAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRHTPG 465
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + T + G ++ WG N G LG G
Sbjct: 466 EVQGLEGITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDG 506
Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats.
Identities = 87/289 (30%), Positives = 133/289 (46%), Gaps = 17/289 (5%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
Q R WG+ +G+LG G+ R PV + A+A GG H + G ++
Sbjct: 738 QDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGL--MDVTAMAAGGYHMAAAGQDGTLWTW 795
Query: 96 GLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
GLN +GQLG + Y L P+++ GL I+ G H+ A+ DG ++ WG N +GQ
Sbjct: 796 GLNSYGQLG-GGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQ 854
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G A + P+ +V+ L + T AA G+ + A G + +WG G+LG G
Sbjct: 855 LGDGTTAQSLTPVQVQVQGLMDV-TAMAAGGYHMA-AAGQDGTLWTWGLNSYGQLGGGPL 912
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S L P ++ L + V AAG H A ++G ++ +G + ++
Sbjct: 913 SYRL---------LPVQVQGL--MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGP 961
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ P + L + GGYH G L+TWG N G LG G
Sbjct: 962 LSYRLLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG 1010
Score = 95.5 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 82/281 (29%), Positives = 131/281 (46%), Gaps = 15/281 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV + A+ + T+ + + ++A G N +GQ
Sbjct: 695 WGLNSSGQLGDGTTTQRLTPVQVHGLTDAT--AILTSSSQTVAMRQDRTLWAWGDNHWGQ 752
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG L P+++ GL +V ++ G +H +A DG L+ WG NS GQLG G +
Sbjct: 753 LG-DGTTTRRLTPVQVQGLM-DVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSY 810
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++P+ +V+ L+ A G +VAV G V +WG+ SG+LG G + L
Sbjct: 811 RLLPV--QVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSL---- 864
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
TP ++ + V AAG H A ++G ++ +G + ++ ++ P
Sbjct: 865 -----TPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPV 919
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + GGYH G L+TWG N G LG G
Sbjct: 920 QVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG 960
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 23/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG G+ PV A+A GG+HT+ L + G V+ G N +GQ
Sbjct: 595 WGFNNYGQLGDGTTAGHLTPVQVPGVT--GAVAIAAGGSHTVALLQDGTVWTWGYNIWGQ 652
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+++ GL +V+ I+T H+ A+ DG ++ WG NS+GQLG G
Sbjct: 653 LG-DGTTTHRHSPVQVQGLA-DVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQ 710
Query: 163 KVIPIPTKVECLSGIFTKQAAL-GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+ + G+ A L Q+VA+ + +WG G+LG G
Sbjct: 711 RLTPVQ-----VHGLTDATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDGT-------- 757
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T TP ++ L + V AAG H A ++G ++ +G + ++ ++ P
Sbjct: 758 -TTRRLTPVQVQGL--MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLP 814
Query: 282 SLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + + G HT + G ++ WGSN +G LG G
Sbjct: 815 VQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDG 858
Score = 87.0 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 85/281 (30%), Positives = 132/281 (46%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ ++G+LG G+ R PV + A+A G +T+ + G V+A G N Q
Sbjct: 395 WGDNEWGQLGDGTTTRRLTPVQVQGLT--GVTAIAAGYLYTVASKQDGTVWAWGDNKRSQ 452
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P + GL+ + I+ + A+ DG ++ WG N+ GQLG G
Sbjct: 453 LG-EGAVSQRHTPGEVQGLEG-ITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTR 510
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ +V+ L+G+ T AA + VAV G V +WG G G+LG G G R
Sbjct: 511 RLTPV--QVQGLAGV-TAVAASDY-HLVAVRQDGTVWAWGVGFWGQLGDGT-----GMDR 561
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S TP ++ L GV AAG H+ + ++G V+ +G ++ P
Sbjct: 562 S----TPVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPV 615
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + GG HT L G ++TWG N G LG G
Sbjct: 616 QVPGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDG 656
Score = 85.9 bits (211), Expect = 3e-14, Method: Composition-based stats.
Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 20/259 (7%)
Query: 66 SAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
+AF + LA G G HTL + + G V+A G ND GQLG P+++
Sbjct: 67 NAFAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLG-DGTTTRRFSPVQV---MTG 122
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
I+ G +H+ A + DG ++ WG+NS+GQLG G + P+ +V+ L+G+ A
Sbjct: 123 ATAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPV--QVQGLTGV--TAVAA 178
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S A+ GG V +WG G+LG G ST TP ++ L GV +
Sbjct: 179 GRNHSAALGQGGTVWTWGDNLVGQLGDGT---------STQRLTPVQVQGLTGVIA--IS 227
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
A + + ++G V+ +G+ + ++ P + L + GG L
Sbjct: 228 ANDSETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTAIAAGGGFAVALR 287
Query: 305 SGGELYTWGSNENGCLGIG 323
G L+ WGSN G LG G
Sbjct: 288 QDGTLWAWGSNSRGQLGNG 306
Score = 84.7 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 90/333 (27%), Positives = 137/333 (41%), Gaps = 67/333 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG------ 96
WG YG+LG G L R PV + A+A G +HT+ + + G V+A G
Sbjct: 795 WGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQ 854
Query: 97 ----------------------------------------------LNDFGQLGISENIG 110
LN +GQLG +
Sbjct: 855 LGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLG-GGPLS 913
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
Y L P+++ GL +V ++ G +H +A DG L+ WG NS GQLG G + +++P+ +
Sbjct: 914 YRLLPVQVQGL-MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPV--Q 970
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
V+ L + T AA G+ + A G + +WG G+LG G S L TP
Sbjct: 971 VQGLMSV-TAMAAGGYHMA-AAGQDGTLWTWGLNSYGQLGGGPLSQSL---------TPV 1019
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
++ V AAGF H+ + ++G V+ +G A ++ + P + L
Sbjct: 1020 QVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGLTGV 1079
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G HT L G ++ WG N G LG G
Sbjct: 1080 TAISAGDAHTVALRRDGTVWAWGRNSWGQLGDG 1112
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + A+A H + + + G V+A G+ +GQ
Sbjct: 495 WGDNARGQLGDGTTTRRLTPVQVQGLA--GVTAVAASDYHLVAVRQDGTVWAWGVGFWGQ 552
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+++ GL V I+ G +H+ A+ DG ++ WG N+ GQLG G A
Sbjct: 553 LGDGTGMDRS-TPVQVQGLTG-VTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAG 610
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V ++G A G +VA+ G V +WG G+LG G
Sbjct: 611 HLTPV--QVPGVTGAVA--IAAGGSHTVALLQDGTVWTWGYNIWGQLGDGT--------- 657
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T ++P ++ L V G H+ + ++G V+ +G + ++ P
Sbjct: 658 TTHRHSPVQVQGLADVIAIATNNG--HTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPV 715
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + ++ T + L+ WG N G LG G
Sbjct: 716 QVHGLTDATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDG 756
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG +G+LG G+ R PV + ALA G AHT+ + E G V+A G N
Sbjct: 1248 AWTWGFNLWGQLGDGTFTDRATPVQVQGLT--GVSALAAGYAHTVVVGEDGTVWAWGNNS 1305
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + S P+++ L ++ G H+ A++ DG + WG+N+ GQ+G G
Sbjct: 1306 GTQLGNGSSTDRS-TPVQVEALTG-AFSLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGT 1363
Query: 160 KAAKVIPIPTKVE 172
A + P+ V+
Sbjct: 1364 TADRPTPVNVMVQ 1376
>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
vinifera]
Length = 1107
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 134/307 (43%), Gaps = 46/307 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + + +++ +ACG HT +T +G +Y G +F
Sbjct: 336 WGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 395
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 396 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 454
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
K + P +VE L G T +A G + AV GK+ +WG G
Sbjct: 455 D--TKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDK 512
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 513 GRLGHGDKEAKL---------VPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGS-- 561
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 562 --PVYGQLGN----PQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGA 615
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 616 NGRLGHG 622
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 38/271 (14%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-IS 129
++ +ACGG H +T+ G +++ G G+L G+ ++ L P I L ++ ++
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV---LHPKLIDSLSNTNIELVA 370
Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
G +H+ A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 371 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW--VPKRVNGPLEGIHVSSISCGP 428
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ VT G++ ++G G G LGHG S+ PR ++ L+G + I+A G
Sbjct: 429 WHTAVVTSSGQLFTFGDGTFGVLGHGDTKSV---------SKPREVESLKGHRTVISACG 479
Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
H+A + E +G+++ +GD DK G+ + P+ ++ L P
Sbjct: 480 VWHTAAVVEIMVGNPSSSNCSSGKLFTWGD--GDKGRLGHGDKEAKLVPTCVAALVDPNF 537
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS G LG
Sbjct: 538 CRVACGHSLTVALTTSGHVYTMGSPVYGQLG 568
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G E++ P +A + +ACG + T+ LT +G VY G +GQ
Sbjct: 507 WGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 566
Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G P R+ G K V +I+ G +H + +T E+Y WGK +NG+LG G
Sbjct: 567 LGNPQADGKL--PTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 624
Query: 161 AAKVIPIPTKVECLSGIFTKQAALG 185
+ PT VE L K A G
Sbjct: 625 DDRN--SPTLVEALKDKQVKSIACG 647
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 129/299 (43%), Gaps = 36/299 (12%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G Y G LG G+ S W P V E + +++CG HT +T +G ++ G
Sbjct: 388 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGT 447
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHHSSAIT------------VDGELYM 146
FG LG + S +P + LK IS G H++A+ G+L+
Sbjct: 448 FGVLGHGDTKSVS-KPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFT 506
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG G+LG G K AK++P T V L + A G +VA+T G V + G+
Sbjct: 507 WGDGDKGRLGHGDKEAKLVP--TCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVY 564
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG+ Q L R+ +L V+ A G H A + VY +G A
Sbjct: 565 GQLGNPQADGKL---------PTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGA 615
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW--GSNENGCLG 321
++ + + P+L+ L + + CG T + L+ W G +++ C G
Sbjct: 616 NGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATIC----LHKWVSGVDQSMCSG 670
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + A G + VT G++ SWG GRLGHG +S +L
Sbjct: 302 LPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-------- 353
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L +++ A G H+ + +G +Y +GD + L GN P +
Sbjct: 354 -HPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 412
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT V+TS G+L+T+G G LG G
Sbjct: 413 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 454
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 134/273 (49%), Gaps = 25/273 (9%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P L +L+ G G H L +TE G +YA G N + QLG + N
Sbjct: 54 LGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRIS-GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
G S P+ +S L+ K V ++S G HHS A+T +GE++ WG N+ GQ+G G A + P
Sbjct: 114 QGVS--PILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQ--P 169
Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P KV CL A G S+AVT G+V WG G+G+LG G + L
Sbjct: 170 TPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQL------- 222
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
TP + L+G V A+G+ HS + + G +Y +G ++ GN + + S +
Sbjct: 223 --TPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPVQ 278
Query: 286 KLPYSEEVV----CGGYHTCVL-TSGGELYTWG 313
+ E +V C HT T G++Y WG
Sbjct: 279 VMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P++ S + + ++CG H+L LT G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P ++S K +V I+ G S A+T +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P ++ L G Q A G+ S+A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQL--TPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E + V+IAA H SA ++G+VY++G
Sbjct: 276 PV--------QVMTEKERI-VEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 127/276 (46%), Gaps = 22/276 (7%)
Query: 58 SRWRPV--VCSAFEKHSLKALACGGA---HTLFLTETGCVYATGLNDFGQLGISENIGYS 112
S+W P+ + SA E S++ GA +++T VY GLN LG ++ +
Sbjct: 5 SKW-PLFTLLSAQELSSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQS-T 62
Query: 113 LEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
+ P ++ L K+++ +S G H +T DGELY WG N QLG G V PI
Sbjct: 63 IAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVS 122
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L G + + G S+A+T G+V +WG G++G G + ++ TPR
Sbjct: 123 TN-LQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSG---------STANQPTPR 172
Query: 231 LIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP 288
+ KV + A G S + +NG VY +G ++ L GN LI+
Sbjct: 173 KVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQG 232
Query: 289 YSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
+ + GY H+ LT G LY WG+N G LG G
Sbjct: 233 FCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTG 268
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P A + + +A G AH+L LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG N L P+++ K+ +V+I+ + H S+A T G++YMWG+
Sbjct: 265 LGTG-NKSNQLSPVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ 312
>gi|324509125|gb|ADY43843.1| RCC1 and BTB domain-containing protein 1 [Ascaris suum]
Length = 533
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 129/271 (47%), Gaps = 20/271 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISEN- 108
LG + P ++ +LA G G H L L++ G V++ G N FGQLG+
Sbjct: 54 LGTNRSQGTLEPSRIDTLSGRAIVSLAYGSGPHVLALSQNGEVFSWGHNAFGQLGLGSTT 113
Query: 109 --IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
I SL +SG VVQI+ G HHS A+T GE++ WG+NS GQ+G+G + +P
Sbjct: 114 VGIAPSLVGDTLSG--HNVVQIACGSHHSVAVTDRGEIFAWGRNSCGQVGIGSNVNQDLP 171
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
L+ F + G ++A+T GG+V +WG G+G+LG G S ++
Sbjct: 172 RQVTGHLLNR-FVRSVVCGQNSTMALTDGGEVFAWGFNGNGQLGAGNLS---------NQ 221
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
++P L+ L V ++ A GF HS + + G+++ +G ++ + ++
Sbjct: 222 HSPALVIGLHNVVIEQIACGFAHSLALTDEGQLFAWGSNTCGQLCANLPRSNQTSPVLVA 281
Query: 287 LPYSEEVVCGGYHTCVLT----SGGELYTWG 313
+ H C +T G++Y WG
Sbjct: 282 SALGRIIEVAAVHACNITVAVNQSGKVYMWG 312
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 122/225 (54%), Gaps = 15/225 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ +G+LGLGS P +V H++ +ACG H++ +T+ G ++A G N G
Sbjct: 99 WGHNAFGQLGLGSTTVGIAPSLVGDTLSGHNVVQIACGSHHSVAVTDRGEIFAWGRNSCG 158
Query: 102 QLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+GI N+ L P +++G L + V + G + + A+T GE++ WG N NGQLG G
Sbjct: 159 QVGIGSNVNQDL-PRQVTGHLLNRFVRSVVCGQNSTMALTDGGEVFAWGFNGNGQLGAGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P V L + +Q A GF S+A+T G++ +WG+ G+L
Sbjct: 218 LSNQ--HSPALVIGLHNVVIEQIACGFAHSLALTDEGQLFAWGSNTCGQL--------CA 267
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
L +++ +P L+ G +++AA + + ++++G+VY++G
Sbjct: 268 NLPRSNQTSPVLVASALGRIIEVAAVHACNITVAVNQSGKVYMWG 312
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I L+ +V S+G + +T +GELY G NS LG + + P ++++ LSG
Sbjct: 18 IENLQTAIVFGSSG-SEAILVTKEGELYAIGTNSCSCLGTNRSQGTLEP--SRIDTLSGR 74
Query: 178 FTKQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-L 235
A G +A++ G+V SWG G+LG G S+ +G P L+ + L
Sbjct: 75 AIVSLAYGSGPHVLALSQNGEVFSWGHNAFGQLGLG--STTVGI-------APSLVGDTL 125
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEE 292
G V A G HS + + G ++ +G + ++ + P ++ +
Sbjct: 126 SGHNVVQIACGSHHSVAVTDRGEIFAWGRNSCGQVGIGSNVNQDLPRQVTGHLLNRFVRS 185
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VVCG T LT GGE++ WG N NG LG G
Sbjct: 186 VVCGQNSTMALTDGGEVFAWGFNGNGQLGAG 216
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+L ++ P + ++ +ACG AH+L LT+ G ++A G N GQ
Sbjct: 205 WGFNGNGQLGAGNLSNQHSPALVIGLHNVVIEQIACGFAHSLALTDEGQLFAWGSNTCGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV----DGELYMWGKNSNGQLGLG 158
L + P+ ++ +++++ H+ ITV G++YMWG+ GQ
Sbjct: 265 LCANLPRSNQTSPVLVASALGRIIEVAAV--HACNITVAVNQSGKVYMWGQ-VRGQ---- 317
Query: 159 KKAAKVIPIPTKVECLSGIF 178
PI T C+ F
Sbjct: 318 ---TATCPIETHFGCVDDAF 334
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3097 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3156
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 3157 LGHGDNT-TQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3215
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3216 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3271
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3272 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3322
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3323 NKKPALVIGLDAVFVNRVACGSSHS 3347
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 129/287 (44%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 3104 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3162
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3163 TTQLKP--KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3215
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3216 ----SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3271
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P I L V G H +T G++Y WG N++G G G
Sbjct: 3272 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4160 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4220 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4277
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4278 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4334
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH ++G VY +GD ++ +
Sbjct: 4335 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4387
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4388 RPRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4054 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4111
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4112 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4171 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4224
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4225 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4274
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S KLPY E V CG + LT G +YTWG + LG G
Sbjct: 4275 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4329
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4140 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4197
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4198 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4255
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4256 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 4306
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4307 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4366
Query: 309 LYTWGSNENGCLGIG 323
+YTWG N+ G LG G
Sbjct: 4367 VYTWGDNDEGQLGDG 4381
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 128/254 (50%), Gaps = 22/254 (8%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLG--ISENIG--YSLEPLRISGLKKEVVQISTGYH 133
GG+ +LF+ ++ G VYA G G+LG ++ N+ + L LR +KK V + +G
Sbjct: 3026 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKK--VAVHSGGK 3083
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 3084 HALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAIS 3141
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSA 251
G++ +WG G GRLGHG +T++ P+L+ L G +V A G +
Sbjct: 3142 SQGELYTWGLGEYGRLGHGD---------NTTQLKPKLVTALAGRRVVQVACGSRDAQTL 3192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE+
Sbjct: 3193 ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEV 3252
Query: 310 YTWGSNENGCLGIG 323
+TWG + LG G
Sbjct: 3253 WTWGKGDYYRLGHG 3266
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 117/271 (43%), Gaps = 34/271 (12%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
ES P + F+ +K +AC L L++ G +Y L EPL
Sbjct: 561 ESAGVPTLSCRFQ---IKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPL 606
Query: 117 RISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ + +V IS H H AI + Y WG + +LG G A+ +P TK+
Sbjct: 607 PMEEVAHDVF-ISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP--TKIA 663
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + G S A+T GG +L+WG G RLGHG S P L+
Sbjct: 664 ALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGN---------SDDRSLPTLV 714
Query: 233 KEL-EGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
L + + V +A +G HS + G V+ +GD K+ N + +P L+ LP
Sbjct: 715 VALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRV 774
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ V G + L+S G+LYTWG + CLG
Sbjct: 775 QRVFAGSQFSVALSSEGQLYTWG--KATCLG 803
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 752 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 809
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 810 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 865
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 21/247 (8%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
C G H L + Y+ G + +LG + ++ P +I+ L++ VQ + G +S+
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 681
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
AIT G L WG+ + +LG G + +P T V LS ALG S+A+T
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLP--TLVVALSDHMVVDVALGSGDAHSLALTS 739
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG+G + L P L++ L V+ A + F S +
Sbjct: 740 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLPRVQRVFAGSQF--SVALS 788
Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
G++Y +G +++ + P L+S L + +V H L+S GE++
Sbjct: 789 SEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 848
Query: 311 TWGSNEN 317
WG N++
Sbjct: 849 GWGRNDS 855
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 128 ISTGYHHSSAIT---VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ST + ++A + + +WG N QLG G K +KV +PT + +S + A
Sbjct: 2969 VSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAG 3026
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+ GKV + G G +GRLG G ++ P + L VK A
Sbjct: 3027 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLRQYVVKKVA 3077
Query: 245 --AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
+G H+ + +G+V+ +G+ K+ +P L+ L + +V CG H+
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
++S GELYTWG E G LG G
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHG 3160
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 89/238 (37%), Gaps = 69/238 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4051 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4109 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4168
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4169 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4220 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4277
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 29/193 (15%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA-LGFEQSVAVTGGG 196
++ +G+LY W L K A+ +P+ E +F A +A+
Sbjct: 587 LSQEGKLYTWR--------LAKPEAEPLPME---EVAHDVFISIAGHCEGRHFLAIDSNH 635
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
SWG G RLGHG + + P I LE V+ G +SA I
Sbjct: 636 NAYSWGTGEDHRLGHGD---------THARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 686
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC------GGYHTCVLTSGGELY 310
G + +G ++ + P+L+ L S+ +V G H+ LTS G ++
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVAL--SDHMVVDVALGSGDAHSLALTSEGLVF 744
Query: 311 TWGSNENGCLGIG 323
WG + G LG G
Sbjct: 745 AWGDGDYGKLGNG 757
>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
Length = 819
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 131/282 (46%), Gaps = 20/282 (7%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E P E + +A G H+L L + G V+A G N +G
Sbjct: 133 WGYNSYGQLGLGEAGEIERIPKKIEGLE--DVIKVAAGSRHSLALKKDGTVWAWGYNYYG 190
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG NI + P+++ GL V I G S A+ DG ++ WG N GQ+G G
Sbjct: 191 QLGDESNIRRN-TPVQVKGLTG-VKDIDAGDFFSVALRDDGTVWGWGYNYKGQIGCGTGI 248
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P+ T +S I Q + G E +A+ V WGAG G+LG+G +S L
Sbjct: 249 NSNVPLQTV--GVSNI--TQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRIP 304
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
S +T +VK AG + SA I E+G ++I+GD ++ N P
Sbjct: 305 EKLSSFT----------EVKSVKAGTMVSAAIKEDGTLWIWGDNTY-GIMGNSRNINSSP 353
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + V Y L + G ++TWG N NG LG+G
Sbjct: 354 VQRKDISGIKAVELNQYCAAALKNDGTVWTWGKNINGILGLG 395
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 17/191 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G L G+ P+ E ++ A++ G + L L E G V+A G N +GQ
Sbjct: 644 WGSNQFGELAHGNDTFSLEPMQAEGLE--NICAISAGNNYNLALKEDGTVWAWGDNTYGQ 701
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+++ GL+ +V+I G S AIT DG+++ WGKN+ GQLG G
Sbjct: 702 LGNGSTYKTNV-PVQVDGLEN-IVKIIAGRDSSFAITKDGDVWAWGKNNCGQLGDGTTQN 759
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++ P+ K++ G K G + ++ + G V+ G+ SG + LGF
Sbjct: 760 RLTPV--KIDAFKG--CKSIVSGMDFTMVLMNDGTVIGVGSNVSGVM-------TLGF-- 806
Query: 223 STSEYTPRLIK 233
S + P +K
Sbjct: 807 SDRSFIPIEVK 817
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 25/289 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+++ PV + ++ ++CGG H L + E ++A G ND+ Q
Sbjct: 434 WGYNIYGQLGNGNVDYITEPVTINGIS--NISKISCGGKHVLAIDENKTLWAWGNNDYLQ 491
Query: 103 LGISENIGYSLE--------PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L +++G S E P + +K+V I ++ + + D E++++ N
Sbjct: 492 L--IDDVGLSAESGSNDYCIPFAVKS-EKDVKDIVAAFNRTLVVYEDEEVWIYAA-KNTV 547
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G + + +P K+E L G+ ++G +A+ G V S G G+LG G +
Sbjct: 548 AG----DEQSVYLPYKIEGLEGV--TDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQ 601
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ S SE T L K + AAG HS + +G V+ +G ++
Sbjct: 602 T----HHNSYSE-TFNLTKAKGLTNIVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHGN 656
Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P L + G + L G ++ WG N G LG G
Sbjct: 657 DTFSLEPMQAEGLENICAISAGNNYNLALKEDGTVWAWGDNTYGQLGNG 705
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
VQ++ G +H+ A+ DG ++ WG NS GQLGLG +A ++ IP K+E L + + A G
Sbjct: 112 VQVACGEYHTIALKKDGTVWTWGYNSYGQLGLG-EAGEIERIPKKIEGLEDVI--KVAAG 168
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
S+A+ G V +WG G+L G ES+I TP +K L GVK I A
Sbjct: 169 SRHSLALKKDGTVWAWGYNYYGQL--GDESNI-------RRNTPVQVKGLTGVK-DIDAG 218
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
F S + ++G V+ +G ++ G ++ P + ++ G H L
Sbjct: 219 DFF-SVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVSNITQISAGDEHVLALDK 277
Query: 306 GGELYTWGSNENGCLGIG 323
++ WG+ + G LG G
Sbjct: 278 DKNVWGWGAGDKGQLGNG 295
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 23/276 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G++G G+ + P+ ++ ++ G H L L + V+ G D GQ
Sbjct: 234 WGYNYKGQIGCGTGINSNVPLQTVGVS--NITQISAGDEHVLALDKDKNVWGWGAGDKGQ 291
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P ++S EV + G S+AI DG L++WG N+ G +G +
Sbjct: 292 LGNGTAASFLRIPEKLSSFT-EVKSVKAGTMVSAAIKEDGTLWIWGDNTYGIMG---NSR 347
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ--ESSILGF 220
+ P + + +SGI K L + A+ G V +WG +G LG G +S I
Sbjct: 348 NINSSPVQRKDISGI--KAVELNQYCAAALKNDGTVWTWGKNINGILGLGTALDSQIPSV 405
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ T + V++ + G H A I +G ++ +G ++ ++
Sbjct: 406 VSGTGD-------------VEVISCGKTHMAIIKSDGTLWTWGYNIYGQLGNGNVDYITE 452
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
P I+ + ++ CGG H + L+ WG+N+
Sbjct: 453 PVTINGISNISKISCGGKHVLAIDENKTLWAWGNND 488
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG GS PV E ++ + G + +T+ G V+A G N+ GQ
Sbjct: 694 WGDNTYGQLGNGSTYKTNVPVQVDGLE--NIVKIIAGRDSSFAITKDGDVWAWGKNNCGQ 751
Query: 103 LG--ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG ++N L P++I K K +V +G + + DG + G N +G + LG
Sbjct: 752 LGDGTTQN---RLTPVKIDAFKGCKSIV---SGMDFTMVLMNDGTVIGVGSNVSGVMTLG 805
Query: 159 KKAAKVIPIPTKVE 172
IPI K++
Sbjct: 806 FSDRSFIPIEVKIK 819
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3023 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3082
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3083 LGHGDN-ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3141
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3142 SEGSA--TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3197
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3198 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3248
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3249 NKKPALVIGLDAVFVNRVACGSSHS 3273
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 127/285 (44%), Gaps = 15/285 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 2970 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3029
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ I+ G HS+AI+ GELY WG G+LG G
Sbjct: 3030 KLGHGNRTTLD-KPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3088
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A ++ P C S + Q++A+T G V SWG G G+LG G
Sbjct: 3089 ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG------- 3141
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S TP I+ L G+ V G S + G V+ +G ++ H R+
Sbjct: 3142 --SEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRK 3199
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I+ L V G H +T G++Y WG N++G G G
Sbjct: 3200 PQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3244
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 144/297 (48%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4075 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4132
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +S+ P + L+ V+ +++G H A+T DGE+Y WG+ +G+LG
Sbjct: 4133 GRLGVGGSDSWSI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4191
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4192 GNRLS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4245
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4246 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4295
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S KLPY E V CG + LT G +YTWG + LG G
Sbjct: 4296 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4350
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4181 WGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4240
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4241 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4298
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4299 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4355
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH + G VY +GD ++ +
Sbjct: 4356 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4408
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4409 RPRLVAALQGKHIVKVTCGSAHTLALST 4436
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4161 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMS--VADIACGS 4218
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4219 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4276
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4277 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4327
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4328 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4387
Query: 309 LYTWGSNENGCLGIG 323
+YTWG N+ G LG G
Sbjct: 4388 VYTWGDNDEGQLGDG 4402
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 39/249 (15%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V GLND QLG S+ I L P+ I+G K + +S
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFVVSQ---------- 2962
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG+++ G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV
Sbjct: 2963 DGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3020
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG +++ PRL++ L K++ A G HSA I G
Sbjct: 3021 FSWGEGEDGKLGHGNRTTL---------DKPRLVEALRAKKIRDIACGSSHSAAISSQGE 3071
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
+Y +G ++ + +P L++ L S +V CG T LT G +++WG
Sbjct: 3072 LYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGD 3131
Query: 315 NENGCLGIG 323
+ G LG G
Sbjct: 3132 GDFGKLGRG 3140
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G+YGRLG G + + P + A + H + AL G AHTL LT G VYA G D+
Sbjct: 716 WGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDY 775
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + SL+PL I L + V ++ G S A+T +G+LY WGK S L ++
Sbjct: 776 GKLG-NASCNSSLQPLLIECLPR-VQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVER 833
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ +P + L A+G +A++ G++ WG + ++
Sbjct: 834 NVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI 882
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 114/270 (42%), Gaps = 30/270 (11%)
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
S RP K +K +AC L L++ G +Y ++ +PL
Sbjct: 582 STQRPPPALLNCKFHVKQVACSKDIVLLLSKEGKLYNWHIS---------KPDTEPQPLD 632
Query: 118 ISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+ E IS H H A+ + Y WG N +LG G ++ +PTK+E
Sbjct: 633 FGDIGSETF-ISIASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSR--ELPTKIES 689
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L K G S A+T G + +WG G GRLGHG S + P ++
Sbjct: 690 LVR-RVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGI---------SDDQCLPTMVM 739
Query: 234 ELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
L+ +V A +G H+ C+ G VY +GD K+ N + +P LI LP +
Sbjct: 740 ALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQ 799
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V G + LT G+LY+WG + CLG
Sbjct: 800 RVFAGSQFSLALTGEGQLYSWG--KASCLG 827
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 20/246 (8%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
C G H L + Y+ G D +LG + L P +I L + V + G +S+A
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSREL-PTKIESLVRRVKSVYCGCSYSAA 706
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
IT+ G LY WG+ + G+LG G + +P T V L ALG ++ +T
Sbjct: 707 ITLRGNLYTWGRGNYGRLGHGISDDQCLP--TMVMALKDHQVVDVALGSGDAHTLCLTNE 764
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G G+LG+ +S L L E PR+ + G + +A G
Sbjct: 765 GLVYAWGDGDYGKLGNASCNSSLQPL--LIECLPRVQRVFAGSQFSLALTG--------- 813
Query: 256 NGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
G++Y +G + +++ + P LI+ L + +V G H L+S GE++
Sbjct: 814 EGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFG 873
Query: 312 WGSNEN 317
WG N+N
Sbjct: 874 WGRNDN 879
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 22/227 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G SR P + + +K++ CG +++ +T G +Y G ++G+
Sbjct: 665 WGTGDNRRLGHGDCHSRELPTKIESLVRR-VKSVYCGCSYSAAITLRGNLYTWGRGNYGR 723
Query: 103 L--GISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
L GIS++ P + LK +VV ++ +G H+ +T +G +Y WG G+LG
Sbjct: 724 LGHGISDD---QCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGN 780
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESS 216
+ + P+ +ECL + ++ G + S+A+TG G++ SWG LGH E +
Sbjct: 781 ASCNSSLQPL--LIECLPRV--QRVFAGSQFSLALTGEGQLYSWGKASC--LGHQLVERN 834
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G PRLI L+ ++ A G H + G ++ +G
Sbjct: 835 VQGC------SVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWG 875
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 91/236 (38%), Gaps = 65/236 (27%)
Query: 144 LYMWGKNSNGQLG--LGKKAAKVIP----------------------------------- 166
+Y WG N GQLG G + P
Sbjct: 4072 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGS 4131
Query: 167 -------------IPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGH 211
IPT + L +F K+ A+ G + +A+T G+V +WG G G+LGH
Sbjct: 4132 GGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4191
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
G L + R P+L++ L G+ V A G HSA I +G V +G ++
Sbjct: 4192 GNR---LSYDR------PKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLG 4242
Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4243 HGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4298
>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
Length = 1263
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 29/260 (11%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVV 126
+K + ++ G H L L+ G + YS+E R + +K ++
Sbjct: 335 KKMKIHSVDQGAEHMLILSSDGKPF--------------EYNYSIEHARFQCILQEKSII 380
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
QI+ G +HS A++ GEL+ WG+N +GQLG+G+ IP P VE LSG+ Q + G
Sbjct: 381 QITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTS-IPTPQLVEHLSGVPLVQISAGK 439
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A++ G + SWG G+LG G + E P LI+ L+ KV+ A G
Sbjct: 440 AHSMALSMSGNIYSWGRNDLGQLGLGH---------TNGEDFPSLIEALDNQKVEFLACG 490
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLT 304
H+A + ++G V+ FG ++ + RP L+++L + +V CG +HT
Sbjct: 491 GSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYV 550
Query: 305 SG-GELYTWGSNENGCLGIG 323
S G+++++GS + G LG G
Sbjct: 551 SDLGKVFSFGSGKEGQLGNG 570
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG P + A + ++ LACGG+HT LT+ G V+ G +GQ
Sbjct: 454 WGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQ 513
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V Q++ G H+ A D G+++ +G GQLG G
Sbjct: 514 LG-HNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGT 572
Query: 161 AAKVIPIPTKV 171
++IP+P K+
Sbjct: 573 HNQLIPLPMKL 583
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G L S P + L ++ G AH++ L+ +G +Y+ G ND G
Sbjct: 401 WGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLG 460
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ G P I L + V+ ++ G H++ +T DG ++ +G GQLG
Sbjct: 461 QLGLGHTNGEDF-PSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNST 519
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L+G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 520 QNEL--RPRLVTELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNG 570
>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
Length = 1385
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 138/307 (44%), Gaps = 46/307 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G +P + A +++ +ACG HT +T +G +Y G ++
Sbjct: 379 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 438
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 439 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 497
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ + + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 498 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 555
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
GRLGHG + + L P + L A G + + +G VY G
Sbjct: 556 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGS-- 604
Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
+ Q GN P LP + EE+ CG YH VLTS E+YTWG
Sbjct: 605 --PVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGA 658
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 659 NGRLGHG 665
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 34/272 (12%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
K ++ ++CGG H +T+ G +Y+ G G+LG + +P I L ++ +
Sbjct: 354 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 412
Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ G +H+ A+T+ G+LY WG +++G LG G + + +P +V L GI + G
Sbjct: 413 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHW--VPKRVNGPLEGIHVSAISCG 470
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 471 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 521
Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
G H+A + E +G+++ +GD DK G+ R P+ ++ L P
Sbjct: 522 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 579
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ CG T LT+ G +YT GS G LG
Sbjct: 580 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLG 611
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG G ++R P +A + + +ACG T+ LT +G VY G +GQ
Sbjct: 550 WGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQ 609
Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G + P+R+ G K V +IS G +H + +T E+Y WGK +NG+LG G
Sbjct: 610 LGNPQADG--MLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 667
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L + G + A+
Sbjct: 668 DDRS--SPTLVESLKDKQVRTVVCGINFTAAI 697
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL + +K +V IS G H++ +T GE+Y WG+ S G+LG G +P P ++
Sbjct: 347 KPLEFA-VKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCD--VPQPKLIDA 403
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRL 231
L+ + + A G + AVT G + +WG G SG LGHG E S + P+
Sbjct: 404 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNE---------VSHWVPKR 454
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ LEG+ V + G H+A + G+++ FGD + + + P + L
Sbjct: 455 VNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGL 514
Query: 289 YSEEVVCGGYHTCVLTS------------GGELYTWGSNENGCLGIG 323
+ CG +HT + G+++TWG + G LG G
Sbjct: 515 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHG 561
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
IP +E + + + G + VT G++ SWG GRLGHG + +
Sbjct: 345 IPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV--------- 395
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
P+LI L + +++ A G H+ + +G +Y +G+ + L GN P +
Sbjct: 396 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRV 455
Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + + + CG +HT ++TS G+L+T+G G LG G
Sbjct: 456 NGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 497
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 125/280 (44%), Gaps = 20/280 (7%)
Query: 49 GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
G+ G G + R RPV ++ A + G H + LT+TG Y+ G ND GQLG
Sbjct: 391 GQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLG- 449
Query: 106 SENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
EN+ + P I LK K++ S YHHS+ IT GELY +G N GQLGL +
Sbjct: 450 HENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQ 509
Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P V+ L A G ++ T G++ + G G+LG I
Sbjct: 510 STP--QLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQI------ 561
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
P L+ L V A G+ HS + GR + FG ++ H P++
Sbjct: 562 ---KLPTLVA-LPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNV 617
Query: 284 ISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ + V CG YHT +L+ G++Y +G N G LG
Sbjct: 618 VALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLG 657
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 128/288 (44%), Gaps = 22/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G YG LG G R + S ++ + G LT G V GLN GQ
Sbjct: 334 GQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQC 393
Query: 104 G---ISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G E + L P++ + + + + S G H A+T G Y WG N GQLG
Sbjct: 394 GQGHFDERV-MMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHEN 452
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
A K I +P +E L A++ + S +T G++ ++G G+LG H Q S
Sbjct: 453 LATK-IHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQS- 510
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
TP+L+K LE +V + A G H+ G ++ G ++
Sbjct: 511 ----------TPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQ 560
Query: 278 ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P+L++ LP V CG YH+ V+++GG +++G N+ G LGIG
Sbjct: 561 IKLPTLVA-LPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIG 607
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 15/240 (6%)
Query: 89 TGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
+G +Y+ G N +G+LG ++I + L + + G ++ Q+ +G + +T +G +
Sbjct: 327 SGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWD-DIRQVVSGNETLAVLTNEGVVLTC 385
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGG 205
G N +GQ G G +V+ + V+ L K A+ G E +A+T G SWG
Sbjct: 386 GLNKSGQCGQGHFDERVMML-RPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYND 444
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LGH +T + P+LI+ L+ K+ A+ + HSA I + G +Y FG
Sbjct: 445 RGQLGHEN--------LATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMN 496
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ H P L+ L +E V CG YHT + T+ GEL+T G N+ G LG+
Sbjct: 497 DCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLA 556
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 18/264 (6%)
Query: 1 MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW 60
M+ R + A+ Q +K + C+ I+ T A WG D G+LG +L ++
Sbjct: 403 MMLRPVQALRS----QRVKFIAASNGCEHMIALT-DTGLAYSWGYNDRGQLGHENLATKI 457
Query: 61 R-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P + + + L + H+ +T+ G +Y G+ND GQLG+ S L S
Sbjct: 458 HVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKS 517
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
EV ++ G +H+ T GEL+ GKN GQLGL + I +PT V L
Sbjct: 518 LEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHN--RQIKLPTLV-ALPNEMV 574
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A G+ SV V+ GG+ S+G G+LG G + + P ++ +
Sbjct: 575 SFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSK---------VHQNVPNVVALSSNTR 625
Query: 240 VKIAAAGFLHSACIDENGRVYIFG 263
+ A G H+ + E G+VY+FG
Sbjct: 626 MVRATCGCYHTVLLSEQGQVYVFG 649
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 15/225 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D G+LGL + + P + + E + +ACG HT+ T G ++ G ND+GQ
Sbjct: 493 FGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQ 552
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG++ N L L L E+V ++ GY+HS ++ G + +G+N GQLG+G K
Sbjct: 553 LGLAHNRQIKLPTL--VALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKV 610
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGF 220
+ +P V S +A G +V ++ G+V +G G+LG+ G ++L
Sbjct: 611 HQNVP--NVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLPV 668
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
L+ E R ++ AAGF ++ I E R GD
Sbjct: 669 PLKVRPEKNSRRCVDV--------AAGFYTTSLIVERKRENDDGD 705
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+ ST R F+ +G DYG+LG+GS + P V + + CG HT+ L+E G
Sbjct: 586 VVSTGGRAFS--FGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQG 643
Query: 91 CVYATGLNDFGQLGISENIGYSLE-PLRISGLK--KEVVQISTGYHHSSAITV------D 141
VY G N+ GQLG + L PL++ K + V ++ G++ +S I D
Sbjct: 644 QVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDD 703
Query: 142 GELYMWGKN 150
G++ M ++
Sbjct: 704 GDVIMLDQS 712
>gi|130488540|ref|NP_001076272.1| Williams-Beuren syndrome chromosome region 16 [Danio rerio]
gi|126631511|gb|AAI33898.1| Si:dkeyp-36f5.3 protein [Danio rerio]
Length = 451
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 139/268 (51%), Gaps = 23/268 (8%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKE 124
++ + ++CG AH+L LT++ V++ G N FGQ G I E+ YS + +I G
Sbjct: 159 QETRVPQVSCGRAHSLVLTDSEGVFSMGSNTFGQCGRKIVEDEVYSGSHVVHKIEGFDSR 218
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V+Q++ G HS +T G ++ G ++GQ GLG P+P + L+G+ +Q A
Sbjct: 219 VIQVACGQDHSLFLTDRGSVFACGWGADGQTGLGHHNKASCPVPVGGD-LAGVTVQQVAT 277
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIA 243
+ S+AV+ G+V WG +L ES+ + +PRL+ L+GV +++ A
Sbjct: 278 YGDCSLAVSTDGQVFGWGNSEYLQLASVTESTQIS--------SPRLLP-LKGVGRIRQA 328
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPSLI---SKLPYSEEVV---C 295
A G A ++E+G V+++G + K L + R P+ S+ + +V C
Sbjct: 329 ACGGTQVAVLNEDGDVFVWGFGILGKGPKLSESAIPERVPATFFGRSEFNPTVKVASIRC 388
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H +T GGEL+ WG N GCLGIG
Sbjct: 389 GLSHFAAVTDGGELFVWGKNVRGCLGIG 416
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 17/136 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WGN +Y L L S+ + P + ++ ACGG L E G V+ G
Sbjct: 294 WGNSEY--LQLASVTESTQISSPRLLPLKGVGRIRQAACGGTQVAVLNEDGDVFVWG--- 348
Query: 100 FGQLGISENIGYSLEPLRISGL---------KKEVVQISTGYHHSSAITVDGELYMWGKN 150
FG LG + S P R+ +V I G H +A+T GEL++WGKN
Sbjct: 349 FGILGKGPKLSESAIPERVPATFFGRSEFNPTVKVASIRCGLSHFAAVTDGGELFVWGKN 408
Query: 151 SNGQLGLGKKAAKVIP 166
G LG+GK + P
Sbjct: 409 VRGCLGIGKHDDQYFP 424
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 22/191 (11%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
FA WG G+ GLG PV V +++ +A G +L ++ G V+ G
Sbjct: 239 FACGWGAD--GQTGLGHHNKASCPVPVGGDLAGVTVQQVATYGDCSLAVSTDGQVFGWGN 296
Query: 98 NDFGQLG-ISENIGYS---LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
+++ QL ++E+ S L PL+ G + Q + G + + DG++++WG G
Sbjct: 297 SEYLQLASVTESTQISSPRLLPLKGVG---RIRQAACGGTQVAVLNEDGDVFVWG---FG 350
Query: 154 QLGLGKKAAKVIPIPTKV--------ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
LG G K ++ IP +V E + G AVT GG++ WG
Sbjct: 351 ILGKGPKLSESA-IPERVPATFFGRSEFNPTVKVASIRCGLSHFAAVTDGGELFVWGKNV 409
Query: 206 SGRLGHGQESS 216
G LG G+
Sbjct: 410 RGCLGIGKHDD 420
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 138/337 (40%), Gaps = 65/337 (19%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G YG L R P S + +ACG T FL ETG V+ G ND GQ
Sbjct: 16 FGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQ 75
Query: 103 LGI----------------SENIGYS---------------------------------- 112
GI +E+I +
Sbjct: 76 CGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHGST 135
Query: 113 ---LEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
P +I L VV+++ Y H+ +T++G LY +G+N GQLG+ + +P+P
Sbjct: 136 NPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVP 195
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+ A G +V G V+++G G+LG G L + S S
Sbjct: 196 LTYFNSRPVLA--VACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYT---LDYHASPS--- 247
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
L L+ + V A G+ H+ + E+G VY FG ++ +H P+LI L
Sbjct: 248 -LLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALA 306
Query: 289 --YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ +V CG YHT VL+ G++Y +G N +G LG+G
Sbjct: 307 KTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLG 343
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 23/271 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LG GS P + + +AC HT+ +T G +YA G ND GQ
Sbjct: 122 FGFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQ 181
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--- 158
LGI + + + P+ ++ + V+ ++ G HH+ +G + +GKN +GQLG G
Sbjct: 182 LGIDDGMDRHV-PVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTL 240
Query: 159 --KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P L + A G+ ++A+ G V S+G G+LGHG
Sbjct: 241 DYHASPSLLAAP-----LDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHH 295
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ SE P LIK L G H+ + E+G+VY FG ++
Sbjct: 296 L-------SE--PTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLI 346
Query: 277 HARRPSLISKL--PYSEEVVCGGYHTCVLTS 305
P +I+ L + +V G YH+ LT+
Sbjct: 347 DCTSPQIIASLRDKFVVKVASGFYHSICLTA 377
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 11/180 (6%)
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y +G+NS G+L + +P P + + A G EQ+ + G V + G
Sbjct: 14 YSFGQNSYGELCHNDTVDRTLPTP--ISFCHNVKILDVACGNEQTAFLFETGDVFTCGYN 71
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
SG+ G G S + + P L+ E + +A G H I +G +Y FG
Sbjct: 72 DSGQCGIGSTSRV-----QSLRLVPALVT--EDIAHIRSANGCEHLTAISRSGALYTFGF 124
Query: 265 RAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ ++ N P+ I L + EV C +HT V+T G LY +G N+ G LGI
Sbjct: 125 NSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGI 184
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 81 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 139
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 140 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 197
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P P +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 198 PTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLG---------NSG 248
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 249 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 306
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 307 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 124/274 (45%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 35 KWPIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 93
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 94 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 153
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ TPR +
Sbjct: 154 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPTPRRV 203
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + ++G VY++G ++ + P ++ L
Sbjct: 204 TGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 263
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 264 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 233 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 292
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 293 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 345
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 346 --SVILPHLTHFSCTDDVF 362
>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
Length = 1698
Score = 110 bits (275), Expect = 8e-22, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 145/322 (45%), Gaps = 28/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
++ +LK DI + G + R F ++G+ + G+LGL +PV +
Sbjct: 27 SRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVKVLK 84
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
+++ACG HTL T G + A G N GQLG+ N S + LR + +
Sbjct: 85 GERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLL 144
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G H S+A+T DG L++WG NS GQLG G + ++P E G + G+
Sbjct: 145 SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP----KELNMGQSIHWVSCGYRH 200
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G V S+G GRLG L + + P+ ++ L V +++A G
Sbjct: 201 SALVTDSGDVYSFGESADGRLG-------LSAHQLANHSYPQRVESLHSV-LQVACGG-K 251
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E+ +Y FG + ++F A P + V CG H+
Sbjct: 252 HTLALTED-ELYCFGGGEFGQLGLGTLVFV----ADSPVAVGHFRKGRVTHVTCGEQHSA 306
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG G
Sbjct: 307 LITDSGLLYTFGDGRHGKLGHG 328
Score = 105 bits (262), Expect = 3e-20, Method: Composition-based stats.
Identities = 73/240 (30%), Positives = 125/240 (52%), Gaps = 26/240 (10%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ I+ N+ P R+ LK ++ V IS G HS+ +T G L
Sbjct: 7 IPDTGAVFT-----FGKSKIANNV-----PSRL-WLKSDIPVHISCGQSHSAFVTEQGRL 55
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+++G N+ GQLGL K P+ KV L G + A G + ++ T G++L+ G
Sbjct: 56 FVFGDNNRGQLGLQIKGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGN 113
Query: 205 GSGRLGHGQESSILGF--LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LG G + + F LR +Y P +K+ +AG SA + E+GR++++
Sbjct: 114 SDGQLGLGHCNDSISFQRLRPFCDYAP----------IKLLSAGDHTSAALTEDGRLFLW 163
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
GD + ++ F +HA P ++ V CG H+ ++T G++Y++G + +G LG+
Sbjct: 164 GDNSAGQLGFGNDSHALLPKELNMGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGL 223
Score = 82.0 bits (201), Expect = 4e-13, Method: Composition-based stats.
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 26/244 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG+ G+LG G+ P + S+ ++CG H+ +T++G VY+ G + G
Sbjct: 162 LWGDNSAGQLGFGNDSHALLPKELNM--GQSIHWVSCGYRHSALVTDSGDVYSFGESADG 219
Query: 102 QLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG+S + P R+ L V+Q++ G H+ A+T D ELY +G GQLGLG
Sbjct: 220 RLGLSAHQLANHSYPQRVESLH-SVLQVACGGKHTLALTED-ELYCFGGGEFGQLGLGT- 276
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
V P V G + S +T G + ++G G G+LGHG E+
Sbjct: 277 LVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRHGKLGHGDEN----- 331
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH-------------SACIDENGRVYIFGDRAV 267
T+++TP + + V A G H C+++ Y + DR
Sbjct: 332 --FTNQFTPTVCQRFFEYSVMTVACGSSHMLVFARPRQQENEEVCLEDEDVTYSYLDRCY 389
Query: 268 DKML 271
M+
Sbjct: 390 TTMI 393
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 23/291 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P +C + + + A+ GG TLF +T+ G VYA+G G
Sbjct: 3839 WGHNHRGQLGGIEGNKVKSPRLCESLSELN-PAMITGGEQTLFAVTDDGKVYASGYAAHG 3897
Query: 102 QLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S+N+ L L G+ + + I +G H A+T GELY WG+ +G+LGL
Sbjct: 3898 RLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGL 3957
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + +P +E L A G S +T G + +WG G GRLGH +
Sbjct: 3958 GTTVN--MNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHET- 4014
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
++ P+L+ L+G +V A +G + C +G V+ +GD K L + G
Sbjct: 4015 --------QHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGK-LGRGG 4065
Query: 276 NH-ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N ++ P I L + +++CG + LT+ G +YTWG + LG G
Sbjct: 4066 NEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHG 4116
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 128/289 (44%), Gaps = 24/289 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK----ALACGGAHTLFLTETGCVYATGLND 99
G +GRLG+GS ++ P ++ + A+ GG H L +T G +YA G +
Sbjct: 3892 GYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGE 3951
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG+ + ++ P I LK K V+ G HS+ IT DG LY WGK G+LG
Sbjct: 3952 DGKLGLGTTVNMNV-PHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHN 4010
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGH-GQES 215
+ P V L G A G Q++ T G V SWG G G+LG G E
Sbjct: 4011 DHETQ--HKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEG 4068
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S P+ I L G V G S + G VY +G ++ +
Sbjct: 4069 S----------KVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDD 4118
Query: 276 NHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+H R P + L E V+ CG H V T G++++WG N+ G +G
Sbjct: 4119 SHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIG 4167
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 138/287 (48%), Gaps = 19/287 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG D +LG E++ + P+ + A G + +++ G V+A G
Sbjct: 2928 VWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEGSS 2987
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LGI + P +IS L VV+ +S H A+T DG+++ WG GQLG
Sbjct: 2988 GRLGIGGFANIRM-PHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGH 3046
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E ++ + G S AV+ G++ +WG G GRLGHG
Sbjct: 3047 G--SLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGD---- 3100
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGN 276
S ++ P+L++ LE V++ A G ++ + + ++ +GD + K+ ++G+
Sbjct: 3101 -----SNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGS 3155
Query: 277 HARR-PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ P + P + ++ CG + + +LT G++YTWG E LG
Sbjct: 3156 SSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLG 3202
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 128/283 (45%), Gaps = 16/283 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
G G GRLG+G + P S+ + ++ A++C G H L +T G V++ G +G
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYG 3042
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG Y + K + ++S G HS+A++V+GEL+ WG+ ++G+LG G
Sbjct: 3043 QLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSN 3102
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILGF 220
+ P V L + A G + + G L +WG G G+LG SS
Sbjct: 3103 NQTKP--KLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSS---- 3156
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S P + ++I G S + + G+VY +G ++ +
Sbjct: 3157 ----STDVPVQVITFPSNIIQIEC-GMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPI 3211
Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L +V G H LTS GE+Y+WG NE+G G
Sbjct: 3212 PTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQG 3254
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G H L LT+ G VY+ G G LGI N P ++ L +V IS G HS+A+
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIG-NTESQTAPTAVAALSGDRIVHISAGSMHSAAV 575
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
T DG LY WGK S G+LG G K+ IPT VE L+G+ Q G ++A+ G
Sbjct: 576 TEDGVLYTWGKGSYGRLGHGNAEDKL--IPTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633
Query: 197 KVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
+V SWG G G+LG G + + + S T ++K + G ++ +A + +
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMA---------LTK 684
Query: 256 NGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYT 311
+G++Y +G D GN H R+P LI L + +V G H LT+ ++Y
Sbjct: 685 DGKLYSWG--CGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYA 742
Query: 312 WGSN 315
WG N
Sbjct: 743 WGKN 746
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY- 132
K H + LT G V+ G +++E L G +E++QI
Sbjct: 466 KEFYSSPKHRVVLTVHGTVFYVMDASMGD--------FTVEQLFFPG-DEEIIQIDHNPS 516
Query: 133 -HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+H A+T DG++Y WG+ SNG LG+G ++ P T V LSG + G S A
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAP--TAVAALSGDRIVHISAGSMHSAA 574
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLH 249
VT G + +WG G GRLGHG L P +++ L GVK+ +G H
Sbjct: 575 VTEDGVLYTWGKGSYGRLGHGNAEDKL---------IPTIVEGLNGVKIVQVDCGSGDAH 625
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
+ +D+ G+V+ +GD K+ + + P IS + + VV CG + LT
Sbjct: 626 TLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKD 685
Query: 307 GELYTWGSNENGCLGIG 323
G+LY+WG + LG G
Sbjct: 686 GKLYSWGCGDTYQLGHG 702
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 26/273 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G YG+LG GSL+S RP + F+ ++ ++CG H+ ++ G ++ G G+
Sbjct: 3036 WGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGR 3095
Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
LG ++ + +P + L+K + ++ G ++ + D L+ WG S G+LGL K
Sbjct: 3096 LGHGDSNNQT-KPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGL-KD 3153
Query: 161 AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P +V S I + + F SV +T GKV +WG G RLG+ S
Sbjct: 3154 GSSSTDVPVQVITFPSNIIQIECGMHF--SVLLTKEGKVYTWGKGEYYRLGNDSTS---- 3207
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
+ P L+ L + A G LH + +G VY +GD Q+GN++
Sbjct: 3208 -----VQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHG----QQGNNST 3258
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTSG 306
R+P +++ L ++ CG H+ G
Sbjct: 3259 ICNRKPQIVASLKGHRICKIACGSSHSIAFAQG 3291
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G LG+G+ ES+ P +A + ++ G H+ +TE G +Y G +G+
Sbjct: 532 WGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGR 591
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N L P + GL ++VQ+ +G H+ A+ G+++ WG G+LG
Sbjct: 592 LG-HGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPG 650
Query: 160 KAAKVIPIPTKVECLSGIFTKQAAL----GFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+P P +SGI + + G + S+A+T GK+ SWG G + +LGHG +
Sbjct: 651 SDQNKVPKP-----ISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQE 705
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+LI+ L V + G H + + VY +G
Sbjct: 706 HV---------RQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 17/237 (7%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
V+ GLND QLG + P+ L + +Q + G S ++ DG+++ G+
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEG 2985
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGR 208
S+G+LG+G A I +P ++ LS ++ A+ +AVT GKV SWG G G+
Sbjct: 2986 SSGRLGIGGFAN--IRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQ 3043
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S+ + R P++I+ + ++ + G HSA + NG ++ +G A
Sbjct: 3044 LGHG---SLQSYDR------PKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADG 3094
Query: 269 KMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSG-GELYTWGSNENGCLGI 322
++ + N+ +P L+ L V CG + L +G L+ WG G LG+
Sbjct: 3095 RLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGL 3151
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 111/227 (48%), Gaps = 18/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LGLG+ + P + + + + CG +H+ +T+ G +Y G +G+
Sbjct: 3947 WGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGR 4006
Query: 103 LGISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-G 158
LG +++ +P +S LK E V +G + T G ++ WG G+LG G
Sbjct: 4007 LGHNDH-ETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGG 4065
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +KV P K++ L+G + G + S+A+T G V +WG G RLGHG +S
Sbjct: 4066 NEGSKV---PKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDS--- 4119
Query: 219 GFLRSTSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
+ TP R++ L V G LH E+G+V+ +GD
Sbjct: 4120 ------HQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGD 4160
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 116/250 (46%), Gaps = 21/250 (8%)
Query: 83 TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITV 140
TL T V+ G N GQLG E G ++ R+ E+ I+ G A+T
Sbjct: 3827 TLPTGSTFSVFGWGHNHRGQLGGIE--GNKVKSPRLCESLSELNPAMITGGEQTLFAVTD 3884
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
DG++Y G ++G+LG+G P P GI K+ A+ G + +AVT G++
Sbjct: 3885 DGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGEL 3944
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+WG G G+LG G + + P LI+ L+ V A G HSACI ++G
Sbjct: 3945 YAWGEGEDGKLGLGT---------TVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGS 3995
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC-----GGYHTCVLTSGGELYTWG 313
+Y +G ++ + +P L+S L E+V C G T T+ G +++WG
Sbjct: 3996 LYTWGKGRYGRLGHNDHETQHKPKLVSAL-KGEQVTCVACGSGDAQTLCATASGCVFSWG 4054
Query: 314 SNENGCLGIG 323
+ G LG G
Sbjct: 4055 DGDYGKLGRG 4064
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 7/161 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G E P + KH +K L CG ++ LT G VY G D+
Sbjct: 4053 WGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIK-LLCGSQFSMALTTAGHVYTWGKGDYY 4111
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG ++ + P R+ GL + V+ I G H T G+++ WG N GQ +G
Sbjct: 4112 RLGHGDD-SHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQ--IGN 4168
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
+ + +P ++ I A G S+A + + LS
Sbjct: 4169 DTTQAVSVPKRINITDNICIDHVACGSAHSIAWSSKQRNLS 4209
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++++WG N QLG AKV P + L+ + Q A G + S V+ GKV +
Sbjct: 2924 NKVFVWGLNDMRQLGTDLSEAKV-KSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFAC 2982
Query: 202 GAGGSGRLGHGQESSIL--GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
G G SGRLG G ++I + S S Y R KV ++ AG H + +G+V
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVR--------KVAVSCAG-RHVLAVTADGKV 3033
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ +GD ++ RP +I + + EV CG H+ ++ GEL+TWG +
Sbjct: 3034 FSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGAD 3093
Query: 318 GCLGIG 323
G LG G
Sbjct: 3094 GRLGHG 3099
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 102 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 160
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 161 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 218
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P P +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 219 PTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGN---------SG 269
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 270 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 327
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 328 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 361
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 124/274 (45%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + + ++E
Sbjct: 56 KWPIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 114
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 115 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 174
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ TPR +
Sbjct: 175 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TVNQPTPRRV 224
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + + ++G VY++G ++ + P ++ L
Sbjct: 225 TGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR 284
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 285 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 318
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 254 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 313
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 314 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 366
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 367 --SVILPHLTHFSCTDDVF 383
>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
Length = 1697
Score = 110 bits (275), Expect = 8e-22, Method: Composition-based stats.
Identities = 94/328 (28%), Positives = 149/328 (45%), Gaps = 34/328 (10%)
Query: 7 TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
+A ++ +LK DI + G + R F ++G+ + G+LGL +PV
Sbjct: 24 SAPSRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVK 81
Query: 67 AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEV 125
+ +++ACG HTL T G + A G N GQLG+ N S + LR +
Sbjct: 82 VLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPI 141
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+S G H S+A+T DG L++WG NS GQLG G + ++P E G + G
Sbjct: 142 KLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP----QELNMGQSIHWVSCG 197
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ S VT G V ++G GRLG L + + P+ ++ L V +++A
Sbjct: 198 YRHSALVTDSGDVYTFGESADGRLG-------LSAHQLANHSYPQRVESLRSV-LQVACG 249
Query: 246 GFLHSACIDENGRVYI-----FGDRAVDKMLFQEGN-----HARRPSLISKLPYSEEVVC 295
G H+ + E+ +Y FG + ++F + H R+ + V C
Sbjct: 250 G-KHTLALTED-ELYCFGGGEFGQLGLGMLVFVADSPVAVGHFRKDRVT-------HVTC 300
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H+ ++T G LYT+G +G LG G
Sbjct: 301 GEQHSALITDSGLLYTFGDGRHGKLGHG 328
Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats.
Identities = 73/240 (30%), Positives = 124/240 (51%), Gaps = 26/240 (10%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
+ +TG V+ FG+ I+ + P R+ LK ++ V IS G HS+ +T G L
Sbjct: 7 IPDTGAVFT-----FGKSKIANS-----APSRL-WLKSDIPVHISCGQSHSAFVTEQGRL 55
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+++G N+ GQLGL K P+ KV L G + A G + ++ T G++L+ G
Sbjct: 56 FVFGDNNRGQLGLQIKGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGN 113
Query: 205 GSGRLGHGQESSILGF--LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LG G + + F LR +Y P +K+ +AG SA + E+GR++++
Sbjct: 114 SDGQLGLGHCNDSISFQRLRPFCDYAP----------IKLLSAGDHTSAALTEDGRLFLW 163
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
GD + ++ F +HA P ++ V CG H+ ++T G++YT+G + +G LG+
Sbjct: 164 GDNSAGQLGFGNDSHALLPQELNMGQSIHWVSCGYRHSALVTDSGDVYTFGESADGRLGL 223
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 26/244 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
LWG+ G+LG G+ P + S+ ++CG H+ +T++G VY G + G
Sbjct: 162 LWGDNSAGQLGFGNDSHALLPQELNM--GQSIHWVSCGYRHSALVTDSGDVYTFGESADG 219
Query: 102 QLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG+S + P R+ L+ V+Q++ G H+ A+T D ELY +G GQLGLG
Sbjct: 220 RLGLSAHQLANHSYPQRVESLR-SVLQVACGGKHTLALTED-ELYCFGGGEFGQLGLGM- 276
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
V P V G + S +T G + ++G G G+LGHG E+
Sbjct: 277 LVFVADSPVAVGHFRKDRVTHVTCGEQHSALITDSGLLYTFGDGRHGKLGHGDEN----- 331
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH-------------SACIDENGRVYIFGDRAV 267
T+++TP + + V A G H C+++ Y + DR
Sbjct: 332 --FTNQFTPTVCQRFFEYSVMTVACGSSHMLVFARPRQQENEEVCLEDEDVTYSYLDRCY 389
Query: 268 DKML 271
M+
Sbjct: 390 TTMI 393
>gi|345856409|ref|ZP_08808895.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
gi|344330533|gb|EGW41825.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
Length = 1419
Score = 110 bits (275), Expect = 8e-22, Method: Composition-based stats.
Identities = 90/288 (31%), Positives = 139/288 (48%), Gaps = 23/288 (7%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
+ WG+ YG+LG G+ R PV K ++A GG H+L L + V A G N
Sbjct: 521 YVMAWGSNTYGQLGDGTNIQRSTPVRVQGL-KGQASSVAAGGTHSLALLQDKSVAAWGNN 579
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
D GQLG + ++GL ++V I+ G HS A+ DG ++ WG NS+GQLG G
Sbjct: 580 DHGQLGDGSFTNRNTAA-TVNGLS-DIVGIAAGERHSLAVQSDGSVWAWGDNSSGQLGDG 637
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P+ KV+ LS + TK AA G + S+A+T GKV +WG G+LG G
Sbjct: 638 TLKERSTPV--KVKGLSQV-TKIAA-GGDTSLAITADGKVWAWGNNQDGQLGDGT----- 688
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-- 276
+ ++ TP L+ L V + G+ H + +G V+ +GD + + + G+
Sbjct: 689 ----TNNQSTPVLVPGLSDVTT--VSVGWTHCLALKSDGGVWAWGDNS--QSILGTGSAD 740
Query: 277 -HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P+ + L + G + +T+ G WG N+ LG G
Sbjct: 741 AYCAVPTQVKGLSGVTAISAGNQFSLAMTNQGVAEAWGRNDFNQLGDG 788
Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats.
Identities = 88/296 (29%), Positives = 135/296 (45%), Gaps = 29/296 (9%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
LQ + A WGN D+G+LG GS +R + + +A G H+L + G V+A
Sbjct: 568 LQDKSVAAWGNNDHGQLGDGSFTNRNTAATVNGLS--DIVGIAAGERHSLAVQSDGSVWA 625
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG + P+++ GL +V +I+ G S AIT DG+++ WG N +GQ
Sbjct: 626 WGDNSSGQLG-DGTLKERSTPVKVKGL-SQVTKIAAGGDTSLAITADGKVWAWGNNQDGQ 683
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P+ V LS + T ++G+ +A+ G V +WG LG G
Sbjct: 684 LGDGTTNNQSTPV--LVPGLSDVTT--VSVGWTHCLALKSDGGVWAWGDNSQSILGTGSA 739
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ P +K L GV +AG S + G +G +++ +
Sbjct: 740 DAYCA--------VPTQVKGLSGVTA--ISAGNQFSLAMTNQGVAEAWGRNDFNQL--GD 787
Query: 275 GNHAR---RPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G+ A+ P I +P + + GGYH T G +WG N +G LG+G
Sbjct: 788 GSAAKFESTPVQIKNMPLVPVVDQSISAGGYHALCGTLGTR--SWGYNASGQLGLG 841
Score = 82.4 bits (202), Expect = 3e-13, Method: Composition-based stats.
Identities = 85/283 (30%), Positives = 124/283 (43%), Gaps = 28/283 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG LG GS +R P + + A+A G ++ L L G V+A G N G
Sbjct: 122 WGSNQYGELGDGSTTNRNSPAPVPSLS--GISAIATGYSYCLALKNDGTVWAWGSNQNGA 179
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P++ISGL VV I+ YH S AI DG ++ WG N GQLG G
Sbjct: 180 LGDGTTDDRK-TPVQISGLSG-VVSIAANYHSSYAIKSDGTVWAWGLNDQGQLGDGLSKD 237
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +PI T + + + GF +V G W G S+ G +
Sbjct: 238 QWLPINTGLSNIKSLIPG----GFSLTVIKQDGS---LWQLG----------LSVNGSVS 280
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RP 281
+ EYT + L V AAAG + I ++ V+ +G+ + N +P
Sbjct: 281 NDVEYTLVQVPGLS--HVVSAAAGQNNFMAILQDQTVWTWGNALPG---YGSMNTVTPQP 335
Query: 282 SLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + V C G++ L + G ++ WG+N NG LG G
Sbjct: 336 VQVQGLSGTYSAVACLGWYDLALKTDGTVWAWGNNMNGELGDG 378
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 128 ISTGYHHSSAITVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+S G HS + GE M WG N+ GQLG G + P+ +V+ L G + AA G
Sbjct: 508 VSAGDSHSLSA---GEYVMAWGSNTYGQLGDGTNIQRSTPV--RVQGLKGQASSVAA-GG 561
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
S+A+ V +WG G+LG G F + T + ++ G+ AAG
Sbjct: 562 THSLALLQDKSVAAWGNNDHGQLGDGS------FTNRNTAATVNGLSDIVGI-----AAG 610
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
HS + +G V+ +GD + ++ P + L ++ GG + +T+
Sbjct: 611 ERHSLAVQSDGSVWAWGDNSSGQLGDGTLKERSTPVKVKGLSQVTKIAAGGDTSLAITAD 670
Query: 307 GELYTWGSNENGCLGIG 323
G+++ WG+N++G LG G
Sbjct: 671 GKVWAWGNNQDGQLGDG 687
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/252 (28%), Positives = 108/252 (42%), Gaps = 31/252 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
+ A++ A+ L + G V+ G G N +L P++ L +V+ IS G
Sbjct: 51 ITAISANEAYALAMKSDGTVWGWGTGPLGNNDADSN--SALVPVQAKNLT-DVIAISAGG 107
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ A+ DG ++ WG N G+LG G + P P V LSGI A G+ +A+
Sbjct: 108 DVALALKNDGTVWSWGSNQYGELGDGSTTNRNSPAP--VPSLSGI--SAIATGYSYCLAL 163
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V +WG+ +G LG G + TP I L GV V I AA + S
Sbjct: 164 KNDGTVWAWGSNQNGALGDGT---------TDDRKTPVQISGLSGV-VSI-AANYHSSYA 212
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS------EEVVCGGYHTCVLTSG 306
I +G V+ +G L +G S LP + + ++ GG+ V+
Sbjct: 213 IKSDGTVWAWG-------LNDQGQLGDGLSKDQWLPINTGLSNIKSLIPGGFSLTVIKQD 265
Query: 307 GELYTWGSNENG 318
G L+ G + NG
Sbjct: 266 GSLWQLGLSVNG 277
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G + +W P+ ++K+L GG + + G ++ GL+ G
Sbjct: 222 WGLNDQGQLGDGLSKDQWLPINTGL---SNIKSLIPGGFSLTVIKQDGSLWQLGLSVNGS 278
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+S ++ Y+L +++ GL VV + G ++ AI D ++ WG N G G
Sbjct: 279 --VSNDVEYTL--VQVPGLS-HVVSAAAGQNNFMAILQDQTVWTWG---NALPGYGSMNT 330
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
V P P +V+ LSG ++ A LG+ +A+ G V +WG +G LG G + + +
Sbjct: 331 -VTPQPVQVQGLSGTYSAVACLGW-YDLALKTDGTVWAWGNNMNGELGDGTKDNHFVPSQ 388
Query: 223 STSEYTP 229
+ ++ TP
Sbjct: 389 NFADKTP 395
Score = 44.7 bits (104), Expect = 0.061, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
T Q + S +++ G V++WG+ G+LG G + TP ++ L+G
Sbjct: 503 TFQGGVSAGDSHSLSAGEYVMAWGSNTYGQLGDGT---------NIQRSTPVRVQGLKGQ 553
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCG 296
+AA G HS + ++ V +G+ D +G+ R + ++ L + G
Sbjct: 554 ASSVAAGG-THSLALLQDKSVAAWGNN--DHGQLGDGSFTNRNTAATVNGLSDIVGIAAG 610
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
H+ + S G ++ WG N +G LG G
Sbjct: 611 ERHSLAVQSDGSVWAWGDNSSGQLGDG 637
Score = 38.9 bits (89), Expect = 3.5, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 12/135 (8%)
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
++A+ G V WG +G LG+ S S P K L V + I+A G +
Sbjct: 61 ALAMKSDGTVWGWG---TGPLGNNDADS-------NSALVPVQAKNLTDV-IAISAGGDV 109
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
A + +G V+ +G ++ + P+ + L + G + L + G
Sbjct: 110 ALA-LKNDGTVWSWGSNQYGELGDGSTTNRNSPAPVPSLSGISAIATGYSYCLALKNDGT 168
Query: 309 LYTWGSNENGCLGIG 323
++ WGSN+NG LG G
Sbjct: 169 VWAWGSNQNGALGDG 183
>gi|410450581|ref|ZP_11304618.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
sp. Fiocruz LV3954]
gi|410015667|gb|EKO77762.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
sp. Fiocruz LV3954]
Length = 506
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 138/297 (46%), Gaps = 31/297 (10%)
Query: 43 WGNGDYGRLGLGSLE--------SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WGN G+LG+G+ R P + + + A G H L L G + +
Sbjct: 204 WGNNAKGQLGIGNNNNPNPKEAGDRLPPTLVPGIDDAVMGAY--GFNHALILKSDGTLVS 261
Query: 95 TGLNDFGQLGISE---NIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
G N+ GQLG E N+ +S P+ + L+ +V+Q+ G HS+A+T +GE+Y+WGKN
Sbjct: 262 FGQNNVGQLGNGEVNLNVNSFSTNPVAVVNLR-DVIQVIAGSEHSAALTENGEVYVWGKN 320
Query: 151 SNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G LG G+ +A V P KVE LSGI KQ A G + +A+ GK+ SWG SG+
Sbjct: 321 QYGNLGNGRLSAANTVQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNASGQ 378
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAV 267
LG G GF TP + L AG S I ++G V +G +
Sbjct: 379 LGIGGS----GFPNP----TPIPTQVLNITNASSVWAGGTQSFSILKSGEVKGWGANGNT 430
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N ++ + E V+ CG H L GE+Y WG N G LG
Sbjct: 431 ANLAIGETNTSKVYEPNKAVVGIENVIHFGCGATHNFALLRNGEIYGWGWNFKGSLG 487
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 22/260 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ G AH+ FL + G VY G N+FGQLG + G + + + +++ I ++
Sbjct: 133 LSAGAAHSGFL-KNGNVYTVGRNNFGQLGTGHSTGDNNNDVIVPLDSIRDIFSIHFNQNN 191
Query: 135 SSAITVDGELYMWGKNSNGQLGLG-------KKAAKVIPIPTKVECLSGIFTKQAALGFE 187
S AI +G +Y WG N+ GQLG+G K+A +P PT V + A GF
Sbjct: 192 SMAIAKNGSVYTWGNNAKGQLGIGNNNNPNPKEAGDRLP-PTLVPGIDDAV--MGAYGFN 248
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
++ + G ++S+G G+LG+G+ + ++ P + L V I AG
Sbjct: 249 HALILKSDGTLVSFGQNNVGQLGNGE----VNLNVNSFSTNPVAVVNLRDVIQVI--AGS 302
Query: 248 LHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
HSA + ENG VY++G + L P + L +++ G H L
Sbjct: 303 EHSAALTENGEVYVWGKNQYGNLGNGRLSAANTVQSTPVKVEGLSGIKQIANGRDHILAL 362
Query: 304 TSGGELYTWGSNENGCLGIG 323
S G++Y+WG N +G LGIG
Sbjct: 363 ASDGKIYSWGLNASGQLGIG 382
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-----VIPIPTK 170
+KE+ ++S G HS + +G +Y G+N+ GQLG G ++P+ +
Sbjct: 121 FQKEINFYFGTKLSAGAAHSGFLK-NGNVYTVGRNNFGQLGTGHSTGDNNNDVIVPLDSI 179
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+ S F + S+A+ G V +WG G+LG G ++ + P
Sbjct: 180 RDIFSIHFNQN------NSMAIAKNGSVYTWGNNAKGQLGIGNNNNPNP-KEAGDRLPPT 232
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-----HARRPSLIS 285
L+ ++ + A GF H+ + +G + FG V ++ E N + P +
Sbjct: 233 LVPGID--DAVMGAYGFNHALILKSDGTLVSFGQNNVGQLGNGEVNLNVNSFSTNPVAVV 290
Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 291 NLRDVIQVIAGSEHSAALTENGEVYVWGKNQYGNLGNG 328
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 72/176 (40%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGKNQYGNLGNGRLSAANTVQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI + + P+ L + G S +I GE+ WG N N L
Sbjct: 374 NASGQLGIGGSGFPNPTPIPTQVLNITNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + P K + GI G + A+ G++ WG G LG
Sbjct: 434 AIGETNTSKVYEPNK--AVVGIENVIHFGCGATHNFALLRNGEIYGWGWNFKGSLG 487
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3185 WGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3244
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 3245 LGHGDN-ATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3303
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3304 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3359
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + ++G+VY +GD D GN
Sbjct: 3360 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDN--DHGQQGSGNTFV 3410
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3411 NKKPALVIGLDDVFVNRVACGSSHS 3435
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 137/301 (45%), Gaps = 21/301 (6%)
Query: 30 WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLT 87
+I S R FA G G GRLGLG + P ++ +K +A GG H L LT
Sbjct: 3120 FIVSQEGRVFAC--GEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 3177
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYM 146
G V++ G + G+LG +P ++ L+ K++ ++ G HS+AI+ GELY
Sbjct: 3178 LDGKVFSWGEGEDGKLGHGNRTTLD-KPRQVEALRAKKIRDVACGSSHSAAISSQGELYT 3236
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAG 204
WG G+LG G A ++ P V L+G Q A G Q++A+T G V SWG G
Sbjct: 3237 WGLGEYGRLGHGDNATQLKP--KLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 3294
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG G S TP I+ L G+ V G S + G V+ +G
Sbjct: 3295 DFGKLGRGG---------SEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGK 3345
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ H R+P I L V G H +T G++Y WG N++G G
Sbjct: 3346 GDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGS 3405
Query: 323 G 323
G
Sbjct: 3406 G 3406
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4335 WGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGR 4394
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4395 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4452
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4453 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4509
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH ++G VY +GD ++ +
Sbjct: 4510 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4562
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L+S L + +V CG HT L++
Sbjct: 4563 RPRLVSALQGKHIVKVTCGSAHTLALST 4590
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4229 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4286
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4287 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4345
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L G+ A G S A+T G+VL+WG G GRLGHG
Sbjct: 4346 GNRVS--YDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGD---- 4399
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4400 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4449
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S KLPY E V CG + LT G +YTWG + LG G
Sbjct: 4450 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4504
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 112/253 (44%), Gaps = 15/253 (5%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A+ GG H L LT G VYA G + G+LG + Y L V I+ G H
Sbjct: 4315 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAH 4374
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT G++ WGK G+LG G ++ P VE L G A G Q++ +
Sbjct: 4375 SAAITASGQVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTLCI 4432
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4433 TDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFSVA 4483
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G VY +G ++ +H RRP ++ L + + G H + GE+Y
Sbjct: 4484 LTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY 4543
Query: 311 TWGSNENGCLGIG 323
TWG N+ G LG G
Sbjct: 4544 TWGDNDEGQLGDG 4556
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 20/253 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G V+A G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3114 GGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3172
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P +VE L + A G S A++
Sbjct: 3173 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRQVEALRAKKIRDVACGSSHSAAISS 3230
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG ++ L P+L+ L G +V A G +
Sbjct: 3231 QGELYTWGLGEYGRLGHGDNATQL---------KPKLVAALAGRRVVQVACGSRDAQTLA 3281
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 3282 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3341
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3342 TWGKGDYYRLGHG 3354
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 113/266 (42%), Gaps = 34/266 (12%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV+ F+ +K + C L L++ G ++A L+ EP +
Sbjct: 581 PVLSCRFQ---VKQVVCSENQVLLLSQEGKLHAWRLSK-----------PEAEPQPLEEA 626
Query: 122 KKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
E IS H H AI + Y WG + +LG G A+ +P TK+ L
Sbjct: 627 GHETF-ISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVP--TKIAALEQH 683
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-E 236
+ G S +T GG +L+WG G RLGHG S P L+ L E
Sbjct: 684 CVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGN---------SDDRCLPTLVAALAE 734
Query: 237 GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
V +A +G HS + G V+ +GD K+ N + +P L+ LP + +
Sbjct: 735 HTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFA 794
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLG 321
G ++ L+S G++YTWG + CLG
Sbjct: 795 GSQYSVALSSEGQVYTWG--KATCLG 818
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ RLG G +R P +A E+H ++++ CG ++ +T G + G + +
Sbjct: 655 WGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTYAR 714
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L L + + VV ++ +G HS A+T +G ++ WG G+LG G
Sbjct: 715 LGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 774
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
+ PI VE L + ++ G + SVA++ G+V +WG LGH E S+ G
Sbjct: 775 NGSLQPI--LVESLPRV--QRIFAGSQYSVALSSEGQVYTWGKATC--LGHQLVERSVQG 828
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRL+ L+ ++ A G H + +G V+ +G
Sbjct: 829 C------SVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWG 866
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 21/246 (8%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
C G H + + Y+ G + +LG + ++ P +I+ L++ VQ + G +S+
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVFCGCTYSA 696
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
IT G L WG+ + +LG G + +P T V L+ ALG S+A+T
Sbjct: 697 VITCGGNLLTWGRGTYARLGHGNSDDRCLP--TLVAALAEHTVVDVALGSGDAHSLALTS 754
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG+G + L P L++ L +V+ AG +S +
Sbjct: 755 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLP--RVQRIFAGSQYSVALS 803
Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
G+VY +G +++ + P L+S L + ++ G H L+S GE++
Sbjct: 804 SEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVF 863
Query: 311 TWGSNE 316
WG N+
Sbjct: 864 GWGRND 869
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 98/245 (40%), Gaps = 85/245 (34%)
Query: 92 VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
V GLND QLG S+ I L P+ I+G K + +S
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFIVSQ---------- 3124
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
+G ++ G+ +NG+LGLG +P+P ++ L K+ A+ G + ++A+T GKV
Sbjct: 3125 EGRVFACGEGTNGRLGLG--VTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3182
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG G G+LGHG +++ PR ++ L K++
Sbjct: 3183 FSWGEGEDGKLGHGNRTTL---------DKPRQVEALRAKKIR----------------- 3216
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+V CG H+ ++S GELYTWG E G
Sbjct: 3217 ---------------------------------DVACGSSHSAAISSQGELYTWGLGEYG 3243
Query: 319 CLGIG 323
LG G
Sbjct: 3244 RLGHG 3248
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 90/238 (37%), Gaps = 69/238 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4226 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4283
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4284 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4343
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G+V +G +
Sbjct: 4344 GHGNR---------VSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGR 4394
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4395 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4452
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 56/168 (33%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + +A +H++ AL G AH+L LT G V+A G D+
Sbjct: 707 WGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDY 766
Query: 101 GQLGISENIGYSLEPLRISGLK-------------------------------------- 122
G+LG + N SL+P+ + L
Sbjct: 767 GKLG-NGNCNGSLQPILVESLPRVQRIFAGSQYSVALSSEGQVYTWGKATCLGHQLVERS 825
Query: 123 ---------------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
K +V ++ G H A++ GE++ WG+N Q+
Sbjct: 826 VQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQV 873
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ SWGAG RLGHG + + P I LE V+ G +
Sbjct: 644 MAIDSNHNAYSWGAGEDHRLGHGD---------THARAVPTKIAALEQHCVQSVFCGCTY 694
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC------GGYHTCVL 303
SA I G + +G ++ + P+L++ L +E V G H+ L
Sbjct: 695 SAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAAL--AEHTVVDVALGSGDAHSLAL 752
Query: 304 TSGGELYTWGSNENGCLGIG 323
TS G ++ WG + G LG G
Sbjct: 753 TSEGLVFAWGDGDYGKLGNG 772
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL---HSACIDENGRVYIFGDRAVDK 269
QE + + S E P+ ++E G + I+ AG H ID N Y +G D
Sbjct: 604 QEGKLHAWRLSKPEAEPQPLEE-AGHETFISIAGHCEGRHFMAIDSNHNAYSWG-AGEDH 661
Query: 270 MLFQEGNHARR-PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L HAR P+ I+ L + V CG ++ V+T GG L TWG LG G
Sbjct: 662 RLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHG 718
>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 129/275 (46%), Gaps = 15/275 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+ G G+ E P + + +++CGGAHT+ ++E G V++ GL GQ
Sbjct: 53 WGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQ 112
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + + ++V+ ++ G H+ + GELY G N NGQ G+G +
Sbjct: 113 LGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSD 172
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P VE L G + A+ G + VTGGG+V ++G+G G+LGHG +
Sbjct: 173 --LLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDL----- 225
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--RR 280
PR + L G+ + + A G ++ C + RV+ FG V ++ +H
Sbjct: 226 ----SMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSE 281
Query: 281 PSLISKLPYSEEVVCGGYHTCV--LTSGGELYTWG 313
P + L E +C + V LT G L WG
Sbjct: 282 PRQMEFLKEEEVELCKCNQSEVIALTRRGALRAWG 316
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 100 FGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+GQ G + E + S + + ++V ++ G HS+ + GE+ WG+N GQ G
Sbjct: 4 WGQAGSAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGT 63
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + PT V L G+ + G +V V+ G+V SWG G +G+LGHG ++
Sbjct: 64 GTQ--EQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNL 121
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
TP +++ + G V G H+ + G +Y G + +
Sbjct: 122 T---------TPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSD 172
Query: 278 ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L + CG HT V+T GGE++T+GS G LG G
Sbjct: 173 LLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHG 220
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG+ + +G++ + P K G + A G S V G G+VL WG
Sbjct: 1 VYFWGQAGSA---VGEQVSSSTPRMLKKA--MGRQVRDVACGLVHSAMVMGSGEVLCWGE 55
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+ G G + +E+ P + L GV + G H+ + E+GRV+ +G
Sbjct: 56 NKYGQCGTGTQEQ--------TEH-PTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWG 106
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
A ++ ++ PS++ + + V CG HT ++ +GGELYT G N+NG G
Sbjct: 107 LGANGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCG 166
Query: 322 IG 323
+G
Sbjct: 167 VG 168
>gi|421113392|ref|ZP_15573836.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
santarosai str. JET]
gi|410801166|gb|EKS07340.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
santarosai str. JET]
Length = 506
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 138/297 (46%), Gaps = 31/297 (10%)
Query: 43 WGNGDYGRLGLGSLE--------SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WGN G+LG+G+ R P + + + A G H L L G + +
Sbjct: 204 WGNNAKGQLGIGNNNNPNPKEAGDRLPPTLVPGIDDAVMGAY--GFNHALILKSDGTLVS 261
Query: 95 TGLNDFGQLGISE---NIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
G N+ GQLG E N+ +S P+ + L+ +V+Q+ G HS+A+T +GE+Y+WGKN
Sbjct: 262 FGQNNVGQLGNGEVNLNVNSFSTNPVAVVNLR-DVIQVIAGSEHSAALTENGEVYVWGKN 320
Query: 151 SNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G LG G+ +A V P KVE LSGI KQ A G + +A+ GK+ SWG SG+
Sbjct: 321 QYGNLGNGRLSAANTVQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNASGQ 378
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAV 267
LG G GF TP + L AG S I ++G V +G +
Sbjct: 379 LGIGGS----GFPNP----TPIPTQVLNITNASSVWAGGTQSFSILKSGEVKGWGANGNT 430
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N ++ + E V+ CG H L GE+Y WG N G LG
Sbjct: 431 ANLAIGETNTSKVYEPNKAVVGIENVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 22/260 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHH 134
L+ G AH+ FL + G VY G N+FGQLG + G + + + + +++ I ++
Sbjct: 133 LSAGAAHSGFL-KNGNVYTVGRNNFGQLGTGHSTGDNNNDVIVLLDSIRDIFSIHFNQNN 191
Query: 135 SSAITVDGELYMWGKNSNGQLGLG-------KKAAKVIPIPTKVECLSGIFTKQAALGFE 187
S AI +G +Y WG N+ GQLG+G K+A +P PT V + A GF
Sbjct: 192 SMAIAKNGRVYTWGNNAKGQLGIGNNNNPNPKEAGDRLP-PTLVPGIDDAV--MGAYGFN 248
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
++ + G ++S+G G+LG+G+ + ++ P + L V I AG
Sbjct: 249 HALILKSDGTLVSFGQNNVGQLGNGE----VNLNVNSFSTNPVAVVNLRDVIQVI--AGS 302
Query: 248 LHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
HSA + ENG VY++G + L P + L +++ G H L
Sbjct: 303 EHSAALTENGEVYVWGKNQYGNLGNGRLSAANTVQSTPVKVEGLSGIKQIANGRDHILAL 362
Query: 304 TSGGELYTWGSNENGCLGIG 323
S G++Y+WG N +G LGIG
Sbjct: 363 ASDGKIYSWGLNASGQLGIG 382
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKV 171
+KE+ ++S G HS + +G +Y G+N+ GQLG G VI + +
Sbjct: 121 FQKEINFYFGTKLSAGAAHSGFLK-NGNVYTVGRNNFGQLGTGHSTGDNNNDVIVLLDSI 179
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ I Q S+A+ G+V +WG G+LG G ++ + P L
Sbjct: 180 RDIFSIHFNQ-----NNSMAIAKNGRVYTWGNNAKGQLGIGNNNNPNP-KEAGDRLPPTL 233
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-----HARRPSLISK 286
+ ++ + A GF H+ + +G + FG V ++ E N + P +
Sbjct: 234 VPGID--DAVMGAYGFNHALILKSDGTLVSFGQNNVGQLGNGEVNLNVNSFSTNPVAVVN 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 292 LRDVIQVIAGSEHSAALTENGEVYVWGKNQYGNLGNG 328
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGKNQYGNLGNGRLSAANTVQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI + + P+ L + G S +I GE+ WG N N L
Sbjct: 374 NASGQLGIGGSGFPNPTPIPTQVLNITNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 AIGETNTSKVYEPNK--AVVGIENVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1073
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 136/299 (45%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + P + + S+ +ACG HT +T TG +Y G ++
Sbjct: 296 WGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNA 355
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + ++ +S G H++ IT G+L+ +G + G LG G
Sbjct: 356 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 414
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
K + + P +VE LSG+ T A G + A+ GK+ +WG G
Sbjct: 415 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKS 472
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+VY G V
Sbjct: 473 RLGHGDKEPRL---------KPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGS-TV 522
Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + P L+ KL EE+ CG YH VLTS E++TWG NG LG G
Sbjct: 523 YGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHG 581
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E R +P SA H+ +ACG + T+ LT +G VY G +GQ
Sbjct: 466 WGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQ 525
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + N L L L K+ V +I+ G +H + +T E++ WGK +NG+LG G
Sbjct: 526 LG-NPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVE 584
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT V+ L K A G + A+
Sbjct: 585 DR--KAPTLVDALKERHVKNIACGSNFTAAI 613
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 38/293 (12%)
Query: 52 GLGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
+G L SR ++ E + + +ACG H ++ G V+ G G+LG
Sbjct: 250 NIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLG--HG 307
Query: 109 IGYSLE-PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKV 164
+G + P I L + ++ G H+ A+T+ GE+Y WG ++ G LG G +
Sbjct: 308 MGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHW 367
Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
IP ++ L G+ + G + +T G++ ++G G G LGHG + ++
Sbjct: 368 --IPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETV------ 419
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-----------NGRVYIFGDRAVDKMLF 272
+ PR ++ L G++ A G H+A I E +G+++ +GD DK
Sbjct: 420 ---FYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDG--DKSRL 474
Query: 273 QEGNHARR--PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
G+ R P+ +S L V CG T LT+ G++YT GS G LG
Sbjct: 475 GHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLG 527
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 36/246 (14%)
Query: 102 QLGISENIGY--------SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
+ G +NIGY +PL S + +V I+ G H++ ++ GE++ WG+ S G
Sbjct: 244 KFGADKNIGYLGSRSDVLIPKPLE-SNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGG 302
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGH 211
+LG G K + P +E L+ A G + AVT G++ +WG G +G LGH
Sbjct: 303 RLGHG--MGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGH 360
Query: 212 GQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + S + P+ I LEG+++ + G H+A I G+++ FGD +
Sbjct: 361 GTD---------VSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVL 411
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTS-----------GGELYTWGSNEN 317
+ P + L + V CG +H + G+L+TWG +
Sbjct: 412 GHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDK 471
Query: 318 GCLGIG 323
LG G
Sbjct: 472 SRLGHG 477
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 142 GELYMWGK---------NSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
G++Y+WG+ ++ +G LG ++ +IP P + + + A G + +
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVH--HIACGVKHAAL 286
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
V+ G+V +WG GRLGHG + G P+LI+ L + A G H+
Sbjct: 287 VSRQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLAATSIDFVACGEFHTC 337
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTS 305
+ G +Y +GD + L G P IS P V CG +HT ++TS
Sbjct: 338 AVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITS 396
Query: 306 GGELYTWGSNENGCLGIG 323
G+L+T+G G LG G
Sbjct: 397 TGQLFTFGDGTFGVLGHG 414
>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Canis lupus familiaris]
Length = 531
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
Length = 710
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 136/288 (47%), Gaps = 22/288 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+ D+G+LGLG ++ +P + + K +ACG +HTL T G VY G GQ
Sbjct: 59 FGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQ 118
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+ E+ EP + + + +S GY+H++ +T DG LY +G+ G+LGL
Sbjct: 119 LGLGEDTTECTEPTLLD-FDSKAISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDL 177
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P KV +GI K + G + A+ G V ++G G SG+LGHG
Sbjct: 178 DSSDTPQKV---TGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGN-----SL 229
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR- 279
L S TP ++ K A+ G +A I G +Y FGD K+ + +
Sbjct: 230 LESP---TPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQ 286
Query: 280 -RPSLISKLPYSEE--VVCGGYHTCVLTS----GGELYTWGSNENGCL 320
RP +++ + V CGG H V+ S GE+ + S+E+ +
Sbjct: 287 FRPFKVARFNKFQVQWVACGGCHMMVIASPRQQNGEISSESSDEDPLM 334
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 20/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYH 133
A+ACG HT +TE G +Y G ND+GQLG+ S +P + LK E + ++ G
Sbjct: 39 AVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTAS-KPSCVKSLKHEKAKLVACGRS 97
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ T DG++Y+WG S GQLGLG+ + PT ++ S + + G+ + VT
Sbjct: 98 HTLIATGDGKVYVWGGGSEGQLGLGEDTTECT-EPTLLDFDSKAIS--VSCGYYHTAVVT 154
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + ++G G+LG L S TP+ + ++ KVK G H+ I
Sbjct: 155 EDGNLYTFGETEYGKLG-------LNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTAI 206
Query: 254 DENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
E+G VY FG+ A ++ GN + P + + ++ CG T V+T G
Sbjct: 207 AESGAVYTFGNGASGQLGH--GNSLLESPTPHRVERFRDADCKHASCGENFTAVITGKGH 264
Query: 309 LYTWGSNENGCLGIG 323
LYT+G +G LG+G
Sbjct: 265 LYTFGDGRHGKLGLG 279
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 10/213 (4%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G G+LGLG + F+ ++ +++CG HT +TE G +Y G ++G
Sbjct: 110 VWGGGSEGQLGLGEDTTECTEPTLLDFDSKAI-SVSCGYYHTAVVTEDGNLYTFGETEYG 168
Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG++ ++ S P +++G+K++V + G H++AI G +Y +G ++GQLG G
Sbjct: 169 KLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNS 228
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P P +VE K A+ G + +TG G + ++G G G+LG G ES F
Sbjct: 229 LLES-PTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDES----F 283
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
T+++ P + +V+ A G H I
Sbjct: 284 ---TNQFRPFKVARFNKFQVQWVACGGCHMMVI 313
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 116/241 (48%), Gaps = 25/241 (10%)
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
+ ETG ++ FG+ +ENI +R + ++ G H++ +T +G LY
Sbjct: 8 VPETGAIFT-----FGKSKFAENISSKFW-IR----NDRICAVACGDEHTALVTENGRLY 57
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+G N GQLGLG K P+ V+ L K A G ++ TG GKV WG G
Sbjct: 58 TFGSNDWGQLGLGH--TKTASKPSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGS 115
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG G++ T+E T + + + + + + G+ H+A + E+G +Y FG+
Sbjct: 116 EGQLGLGED---------TTECTEPTLLDFDSKAISV-SCGYYHTAVVTEDGNLYTFGET 165
Query: 266 AVDKMLFQEG--NHARRPSLISKLPYSEE-VVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
K+ + + P ++ + + VVCGG HT + G +YT+G+ +G LG
Sbjct: 166 EYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIAESGAVYTFGNGASGQLGH 225
Query: 323 G 323
G
Sbjct: 226 G 226
>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 437
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 137/298 (45%), Gaps = 34/298 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL---ACGGAHTLFLTETGCVYATGLND 99
WG+ G+LG G R PV + L+ + ACGG H+L + G V+A G N
Sbjct: 134 WGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNS 193
Query: 100 FGQLGIS--ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQ+G +N + +R V ++ G+ HS A++VDG ++ WG N GQLG
Sbjct: 194 DGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVWAWGDNEFGQLGD 253
Query: 158 GKKAAKVIPIPTKVEC---LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+ P+ L + A F S+A+T G+V +WG G G+LG G
Sbjct: 254 CSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAF--SLALTRDGEVWAWGNNGVGQLGMGPH 311
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVK----IAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ GF+R P ++ GV +K I A G HS + +G V +G A D+
Sbjct: 312 N---GFVRD-----PLPVRAANGVPLKGVRAITANG-RHSLALMNDGSVLAWG--AGDRG 360
Query: 271 LFQEG--NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
+G NH P+L S V+C G YH+ + G + WG N+ G LGIG
Sbjct: 361 QLGQGAQNHEDHPTLASL----HSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIG 414
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 123/259 (47%), Gaps = 22/259 (8%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---SGLKKE-VVQISTGY 132
A GG H+L + G V+A G N GQLGI N SL P+R+ SG V++++ G
Sbjct: 61 AGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKA-SLSPVRVMHKSGAPLNGVLKVAAGE 119
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT---KVECLSGIFTKQAALGFEQS 189
HS A+T GE++ WG NS GQLG G + P+ + L I AA G + S
Sbjct: 120 RHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVG--AACGGKHS 177
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+AV G V +WG+ G++G G + R R K L GVK AAGF H
Sbjct: 178 LAVASDGTVWAWGSNSDGQIGDGTLKN-----RQNPRQVMRFGKPLAGVKA--VAAGFAH 230
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLISKLPYSEEVVCGGYHTCVLT 304
S + +G V+ +GD ++ + P S+ L + G + LT
Sbjct: 231 SLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALT 290
Query: 305 SGGELYTWGSNENGCLGIG 323
GE++ WG+N G LG+G
Sbjct: 291 RDGEVWAWGNNGVGQLGMG 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ G+LG+G+ ++ PV S + + +A G H+L LT G V+ G N
Sbjct: 79 WGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGEVWTWGDNS 138
Query: 100 FGQLGISENIGYSLE---PLRISGLK----KEVVQISTGYHHSSAITVDGELYMWGKNSN 152
GQLG G+ E P+++ ++ + +V + G HS A+ DG ++ WG NS+
Sbjct: 139 KGQLG----DGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNSD 194
Query: 153 GQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQ+G G + P + + L+G+ K A GF S+A++ G V +WG G+LG
Sbjct: 195 GQIGDGTLKNRQNPRQVMRFGKPLAGV--KAVAAGFAHSLALSVDGTVWAWGDNEFGQLG 252
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+ ++ + + + L+ V V I AAG S + +G V+ +G+ V ++
Sbjct: 253 DCSDYD----RKAPVQVMHSVDRPLDNV-VAI-AAGRAFSLALTRDGEVWAWGNNGVGQL 306
Query: 271 LFQEGNHARRPSLISK------LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N R L + L + G H+ L + G + WG+ + G LG G
Sbjct: 307 GMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQLGQG 365
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 88/181 (48%), Gaps = 18/181 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEK--HSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ ++G+LG S R PV V + ++ ++ A+A G A +L LT G V+A G N
Sbjct: 243 WGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVWAWGNNG 302
Query: 100 FGQLGISENIGYSLEPLRISGLK----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG+ + G+ +PL + K V I+ HS A+ DG + WG GQL
Sbjct: 303 VGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQL 362
Query: 156 GLGKKAAKVIPIPTK---VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
G G + + P V CL A G S+AV G VL+WG G+LG G
Sbjct: 363 GQGAQNHEDHPTLASLHSVICL--------AAGRYHSLAVAENGAVLAWGDNQKGQLGIG 414
Query: 213 Q 213
+
Sbjct: 415 K 415
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLN 98
WGN G+LG+G R P+ A LK A+ G H+L L G V A G
Sbjct: 298 WGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAG 357
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
D GQLG + P S V+ ++ G +HS A+ +G + WG N GQLG+G
Sbjct: 358 DRGQLGQGAQ-NHEDHPTLAS--LHSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIG 414
Query: 159 KKAAKVIPIPTKV 171
K +P K
Sbjct: 415 KADKNFHALPEKT 427
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
AA G S+ V G V +WG SG+LG G + L +R + L GV +K
Sbjct: 60 AAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSG----APLNGV-LK 114
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEV--VCG 296
+ AAG HS + G V+ +GD + ++ F E + I P V CG
Sbjct: 115 V-AAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACG 173
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
G H+ + S G ++ WGSN +G +G G
Sbjct: 174 GKHSLAVASDGTVWAWGSNSDGQIGDG 200
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---SKLPYSE--EVVCG 296
IAA G HS + +G V+ +GD + ++ + P + S P + +V G
Sbjct: 59 IAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAG 118
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
H+ LT+ GE++TWG N G LG G
Sbjct: 119 ERHSLALTAKGEVWTWGDNSKGQLGDG 145
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G +Y G +G+
Sbjct: 2874 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGR 2933
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 2934 LGHGDSED-QLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 2991
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 2992 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3048
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3049 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3101
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 3102 RPRLVAALQGKKINRVACGSAHT 3124
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+
Sbjct: 1880 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 1939
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
LG +N L L VVQ++ G + A+T +G ++ WG G+LG G
Sbjct: 1940 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG-- 1997
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 1998 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 2054
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
P++++ L G K+ A G LH + E G+V+ +GD Q+GN
Sbjct: 2055 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHG----QQGNGTTT 2104
Query: 279 --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2105 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2135
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 134/289 (46%), Gaps = 22/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ SA + +K +A GG H + LT G V++ G D
Sbjct: 1826 GEATNGRLGLG-LSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 1884
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 1885 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 1943
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 1944 DNTTQLRPKLVKV--LLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGG--- 1998
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 1999 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 2052
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G+++ WG N++G G G
Sbjct: 2053 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNG 2101
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 114/254 (44%), Gaps = 17/254 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G +Y+ G + G+LG N P I L+ EVV I+ G
Sbjct: 2854 AVNSGGKHCLALSSEGELYSWGEAEDGKLG-HGNRSPCDRPRVIESLRGVEVVDIAAGGA 2912
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
HS+ IT GELY WGK G+LG G ++ P VE L G + G Q++
Sbjct: 2913 HSACITASGELYTWGKGRYGRLGHGDSEDQLKP--KLVEALQGHRVIDVACGSGDAQTLC 2970
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I L G+ V G S
Sbjct: 2971 LTDDDMVWSWGDGDYGKLGRGG---------SDGCKVPMKIDSLTGLGVVKVECGSQFSV 3021
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ +H RRP + L + + G H T GE+
Sbjct: 3022 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 3081
Query: 310 YTWGSNENGCLGIG 323
YTWG N+ G LG G
Sbjct: 3082 YTWGDNDEGQLGDG 3095
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +IS L VV+ + +G H
Sbjct: 1808 GGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRH 1867
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 1868 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 1925
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+L+K L G +V A G +
Sbjct: 1926 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLA 1976
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 1977 LTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2036
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2037 TWGKGDYFRLGHG 2049
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 22/254 (8%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
GG TLF +T G +YATG G+LGI S LE ++ ++K V +++G
Sbjct: 2803 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 2860
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H A++ +GELY WG+ +G+LG G ++ P +E L G+ A G S +T
Sbjct: 2861 HCLALSSEGELYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 2918
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
G++ +WG G GRLGHG S + P+L++ L+G +V A +G +
Sbjct: 2919 ASGELYTWGKGRYGRLGHGD---------SEDQLKPKLVEALQGHRVIDVACGSGDAQTL 2969
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
C+ ++ V+ +GD K+ + + P I L +V CG + LT G +
Sbjct: 2970 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3029
Query: 310 YTWGSNENGCLGIG 323
YTWG + LG G
Sbjct: 3030 YTWGKGDYHRLGHG 3043
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 1762 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 1819
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R S + ++K KV + + G H+ +
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVK-----KVAVHSGG-RHAMALTV 1873
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+WG
Sbjct: 1874 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 1933
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 1934 LGEYGRLGHG 1943
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
G +Y WG N GQLG G + AKV +P PT+
Sbjct: 2763 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 2821
Query: 171 --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+E + +F ++ A+ G + +A++ G++ SWG G+
Sbjct: 2822 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGK 2881
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSACI +G +Y +G
Sbjct: 2882 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYG 2932
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 2933 RLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG 2991
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3032 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 3091
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 3092 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 3126
>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 918
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 140/290 (48%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG L
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLG-------LPN 226
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
+ P+ + + G V++A G H+ + E VY FG + LF+
Sbjct: 227 QLLVNHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFLFE-- 282
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I + + + CG HT ++T G +YT+G +G LG+G
Sbjct: 283 --TSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLG 330
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 30/258 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + L FT KQ + G S
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEER------STFHLISFFTSQRKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G+ +G T+ P+ + G + + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQ---------IGLENVTNVCVPQQV--TVGKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
SA + G++Y FG+ K+ NH R P + +P +V CGG HT VLT
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Query: 306 GGELYTWGSNENGCLGIG 323
+YT+G + G LG+G
Sbjct: 261 KA-VYTFGLGQFGQLGLG 277
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P ++ + CG YH+ +T+ G+LYT+G E G LG+
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGL 224
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
+ACGG HT+ LTE VY GL FGQLG+ + + P I +K + + I+ G +H
Sbjct: 248 VACGGGHTVVLTEK-AVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENH 306
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
++ IT G +Y +G +G+LGLG + + IPT
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPT 341
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 43 WGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFL 86
+G+G +G+LGLG S ++ P +CS F + ++ ++CGG HTL
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVF 364
>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
GTPase regulator-like [Equus caballus]
Length = 915
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 163/325 (50%), Gaps = 33/325 (10%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G + + + + ++G+ ++G+LGLGS +P A +
Sbjct: 28 SKFWFKNDIPICLACGDEHTAVVTGNNKLY--MFGSNNWGQLGLGSESPVSKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K +ACG HT+ TE G VYATG N GQLG+ ++ + ++ + ++ Q+
Sbjct: 86 PEKVKFVACGRTHTIVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTSQHKIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G S+A+T DGEL+MWG NS GQ+GL K + +P +V G + G+
Sbjct: 146 SAGSSSSAALTEDGELFMWGDNSEGQIGL--KNIDNVCVPHQVTI--GKPISWVSCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S +T G++ ++G SG+L G S +L R P+L+ + +++A G
Sbjct: 202 SAFITTEGELYTFGEPESGKL--GLPSKLLINHR-----IPQLVPGIPEKVIQVACGGG- 253
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLIS-----KLPYSEEVVCGGY 298
H+ + EN VY FG + +F+ P++I K+ Y + CG
Sbjct: 254 HTVVLTENA-VYTFGLGQFGQLGLGTFIFE----TSEPTVIEHIKDQKISY---ISCGEN 305
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
HT ++T G +YT+G +G LG+G
Sbjct: 306 HTALITDTGLIYTFGDGRHGKLGLG 330
>gi|159039899|ref|YP_001539152.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157918734|gb|ABW00162.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 554
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 130/285 (45%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG LG GS PVV S ++ A+A GG H+L LT G V A G ND GQ
Sbjct: 61 WGQNDYGELGNGSTAGSNTPVVVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGRNDHGQ 120
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +EP+ + V I+ G H+ A+T G + WG+N GQLG G
Sbjct: 121 LGDGSTVDK-VEPVSVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQLGDGSTV 179
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
K+ P+ V+ +G A G + ++A+T G V +WG+ SG LG G
Sbjct: 180 DKLEPV--SVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGELGDG--------- 228
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ TP L+ AG HS + V+ +GD + D L N +
Sbjct: 229 TTIDRTTPILVGLPG--TTVTTTAGGGHSFAVTSADTVHAWGDNS-DGQLGNGNNVDQLE 285
Query: 282 SLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ +P V G H+ LT+ G L WG+N+ G LG G
Sbjct: 286 PVVVSMPLGATVTAIAGGNDHSLALTAAGALLAWGNNDVGQLGNG 330
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGK 149
+ A G ND+G+LG G S P+ +S V ++ G HS A+T G + WG+
Sbjct: 57 TILAWGQNDYGELGNGSTAG-SNTPVVVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGR 115
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLG G KV P+ V+ +G A G + ++A+T G VL+WG G+L
Sbjct: 116 NDHGQLGDGSTVDKVEPV--SVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQL 173
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + + P + G V A G H+ I G V+ +G + +
Sbjct: 174 GDGS---------TVDKLEPVSVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGE 224
Query: 270 MLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +G R P L+ + GG H+ +TS ++ WG N +G LG G
Sbjct: 225 L--GDGTTIDRTTPILVGLPGTTVTTTAGGGHSFAVTSADTVHAWGDNSDGQLGNG 278
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G LG G+ R P++ + GG H+ +T V+A G N GQ
Sbjct: 217 WGSNSSGELGDGTTIDRTTPILVGL--PGTTVTTTAGGGHSFAVTSADTVHAWGDNSDGQ 274
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG N+ LEP+ +S L V I+ G HS A+T G L WG N GQLG G
Sbjct: 275 LGNGNNVDQ-LEPVVVSMPLGATVTAIAGGNDHSLALTAAGALLAWGNNDVGQLGNGNTL 333
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + T A + S+A+T G VL+WG G LG G
Sbjct: 334 DQSEPVDVNLPTGT-TITAIATRDSDHSLALTAAGSVLAWGENDDGELGDGST-----LD 387
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
RS P + G V AAG HS
Sbjct: 388 RS----EPVDVNLPTGTTVTAIAAGDGHS 412
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ + PVV S ++ A+A G H+L LT G + A G ND GQ
Sbjct: 267 WGDNSDGQLGNGNNVDQLEPVVVSMPLGATVTAIAGGNDHSLALTAAGALLAWGNNDVGQ 326
Query: 103 LGISENIGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + S EP+ ++ + HS A+T G + WG+N +G+LG G
Sbjct: 327 LGNGNTLDQS-EPVDVNLPTGTTITAIATRDSDHSLALTAAGSVLAWGENDDGELGDGST 385
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ P+ V +G A G S+A+
Sbjct: 386 LDRSEPV--DVNLPTGTTVTAIAAGDGHSLAL 415
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 55/157 (35%), Gaps = 15/157 (9%)
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+ + + A E S + +L+WG G LG+G + TP
Sbjct: 31 MTVMQAVTVSPVAAQQEASPSTAASDTILAWGQNDYGELGNGSTA---------GSNTPV 81
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPY 289
++ V A G HS + G V +G D +G+ + +S P
Sbjct: 82 VVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGRN--DHGQLGDGSTVDKVEPVSVDFPA 139
Query: 290 SEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
V G H LTS G + WG N G LG G
Sbjct: 140 GTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQLGDG 176
>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
Length = 531
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|390348536|ref|XP_781445.2| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Strongylocentrotus purpuratus]
Length = 539
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 149/294 (50%), Gaps = 21/294 (7%)
Query: 39 FAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
FA L WG YG+LGLG + P F + +K + GG HT+FLT G ++ G
Sbjct: 149 FAYLAWGANSYGQLGLGHQKDHLLPENLKTFPE-DVKTIVGGGGHTVFLTGNGDLHVCGS 207
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
N+ GQLG+ + + +R+ L+ + +I+ G++H+ AIT + EL WG N++GQL
Sbjct: 208 NNKGQLGLGHTSDIN-KLVRVPDLRP-LKKIACGWNHTVAITENDELLCWGSNTHGQL-- 263
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
++ P ++E LSG+ + A G ++AV+ G++ +WGAG G+LG
Sbjct: 264 -THKESIVTKPRQIE-LSGVDCPRFAAISGGLRHTLAVSTDGQLWTWGAGKKGQLGWTDS 321
Query: 215 SSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ + + P +KE + VK AAG HSA + + G +YI+G ++
Sbjct: 322 KMRVPHQWNKPVHIP--VKEDDVDVKFVQVAAGAYHSAALSDMGILYIWGCNKWSQLAQP 379
Query: 274 EGNHA----RR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ ++ +R P+L L + + G H +T +YTWG N+ G LG
Sbjct: 380 KSSNPISTPKRLDPALFDGLTI-KGIHSGWTHMLAITEDESVYTWGRNDYGQLG 432
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 40/253 (15%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
G +TLF A G N +GQLG+ + L P + ++V I G H+ +T
Sbjct: 144 GVYTLF-----AYLAWGANSYGQLGLGHQKDHLL-PENLKTFPEDVKTIVGGGGHTVFLT 197
Query: 140 VDGELYMWGKNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+G+L++ G N+ GQLGLG + K++ +P K+ A G+ +VA+T +
Sbjct: 198 GNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRP------LKKIACGWNHTVAITENDE 251
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA---GFLHSACID 254
+L WG+ G+L H +ES + PR I EL GV AA G H+ +
Sbjct: 252 LLCWGSNTHGQLTH-KESIVT---------KPRQI-ELSGVDCPRFAAISGGLRHTLAVS 300
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEE--------VVCGGYHTCVL 303
+G+++ +G ++ + + + R P +K +P E+ V G YH+ L
Sbjct: 301 TDGQLWTWGAGKKGQLGWTD-SKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAAL 359
Query: 304 TSGGELYTWGSNE 316
+ G LY WG N+
Sbjct: 360 SDMGILYIWGCNK 372
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 49/229 (21%)
Query: 43 WGNGDYGRLGLGSLESR----W-RPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYA 94
WG G G+LG + R W +PV E +A G H+ L++ G +Y
Sbjct: 308 WGAGKKGQLGWTDSKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAALSDMGILYI 367
Query: 95 TGLNDFGQLGISEN-----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G N + QL ++ L+P GL + I +G+ H AIT D +Y WG+
Sbjct: 368 WGCNKWSQLAQPKSSNPISTPKRLDPALFDGLT--IKGIHSGWTHMLAITEDESVYTWGR 425
Query: 150 NSNGQLGLGKKAAKVIP---------------------IPTKVECLSGIFTKQAALGFEQ 188
N GQ LG+ AAK IP +PT++ L KQ G E
Sbjct: 426 NDYGQ--LGRPAAKSIPNGSAESESNATPTTTTPDCCHVPTEISILKN--AKQIVCGAEH 481
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
S+A+T K+L+WG G G ++++ + P+ ++ L+G
Sbjct: 482 SLAITKDDKLLAWGWNEHGMCADGTKTNV---------FLPKQVQGLDG 521
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 116/259 (44%), Gaps = 28/259 (10%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
+K + GG HT+FLT G ++ G N+ GQLG+ + + +R+ L+ + QI G
Sbjct: 23 DVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDIN-KLVRVPDLRP-LKQIVCG 80
Query: 132 YHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPT-------KVECLSGIFTKQAA 183
++H+ AIT DG L + + ++G ++IP+P V G + ++
Sbjct: 81 WNHTVAITGTDGSLELLHRGQFNEVG-----RELIPVPECSWEETLPVAVRVGAGSHESC 135
Query: 184 LGFEQSV-AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVK 241
+G + V L+WGA G+LG G + L P +K E VK
Sbjct: 136 VGVADVLNGVYTLFAYLAWGANSYGQLGLGHQKDHL---------LPENLKTFPEDVKTI 186
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
+ G H+ + NG +++ G ++ + + + L +++ CG HT
Sbjct: 187 VGGGG--HTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRPLKKIACGWNHTV 244
Query: 302 VLTSGGELYTWGSNENGCL 320
+T EL WGSN +G L
Sbjct: 245 AITENDELLCWGSNTHGQL 263
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 126/298 (42%), Gaps = 47/298 (15%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ + G+LGLG + V LK + CG HT+ +T T G +
Sbjct: 47 GSNNKGQLGLGHTSDINKLVRVPDLR--PLKQIVCGWNHTVAITGT-----DGSLELLHR 99
Query: 104 GISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVD--GELYM------WGKNSN 152
G +G L P+ ++ + V++ G H S D +Y WG NS
Sbjct: 100 GQFNEVGRELIPVPECSWEETLPVAVRVGAGSHESCVGVADVLNGVYTLFAYLAWGANSY 159
Query: 153 GQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
GQLGLG + ++P P V+ + G G +V +TG G + G+ G
Sbjct: 160 GQLGLGHQKDHLLPENLKTFPEDVKTIVG--------GGGHTVFLTGNGDLHVCGSNNKG 211
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG G S I +R + +L +K KIA G+ H+ I EN + +G
Sbjct: 212 QLGLGHTSDINKLVR---------VPDLRPLK-KIAC-GWNHTVAITENDELLCWGSNTH 260
Query: 268 DKMLFQEGNHARRPSLIS----KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ +E + +P I P + G HT +++ G+L+TWG+ + G LG
Sbjct: 261 GQLTHKE-SIVTKPRQIELSGVDCPRFAAISGGLRHTLAVSTDGQLWTWGAGKKGQLG 317
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 32/221 (14%)
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA--KVIPIPTKVEC 173
LRIS ++V I G H+ +T +G+L++ G N+ GQLGLG + K++ +P
Sbjct: 15 LRISNFPEDVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRP- 73
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLI 232
KQ G+ +VA+T G GS L H GQ + + L E +
Sbjct: 74 -----LKQIVCGWNHTVAIT--------GTDGSLELLHRGQFNEVGRELIPVPECS---W 117
Query: 233 KELEGVKVKIAAAGFLHSACIDE----NGRVYIF-----GDRAVDKM-LFQEGNHARRPS 282
+E V V++ A H +C+ NG +F G + ++ L + +H +
Sbjct: 118 EETLPVAVRVGAGS--HESCVGVADVLNGVYTLFAYLAWGANSYGQLGLGHQKDHLLPEN 175
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + + +V GG HT LT G+L+ GSN G LG+G
Sbjct: 176 LKTFPEDVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLG 216
>gi|456874043|gb|EMF89368.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
santarosai str. ST188]
Length = 477
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 138/297 (46%), Gaps = 31/297 (10%)
Query: 43 WGNGDYGRLGLGSLE--------SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WGN G+LG+G+ R P + + + A G H L L G + +
Sbjct: 175 WGNNAKGQLGIGNNNNPNPKEAGDRLPPTLVPGIDDAVMGAY--GFNHALILKSDGTLVS 232
Query: 95 TGLNDFGQLGISE---NIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
G N+ GQLG E N+ +S P+ + L+ +V+Q+ G HS+A+T +GE+Y+WGKN
Sbjct: 233 FGQNNVGQLGNGEVNLNVNSFSTNPVAVVNLR-DVIQVIAGSEHSAALTENGEVYVWGKN 291
Query: 151 SNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G LG G+ +A V P KVE LSGI KQ A G + +A+ GK+ SWG SG+
Sbjct: 292 QYGNLGNGRLSAANTVQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNASGQ 349
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAV 267
LG G GF TP + L AG S I ++G V +G +
Sbjct: 350 LGIGGS----GFPNP----TPIPTQVLNITNASSVWAGGTQSFSILKSGEVKGWGANGNT 401
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N ++ + E V+ CG H L GE+Y WG N G LG
Sbjct: 402 ANLAIGETNTSKVYEPNKAVVGIENVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 458
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 22/260 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ G AH+ FL + G VY G N+FGQLG + G + + + +++ I ++
Sbjct: 104 LSAGAAHSGFL-KNGNVYTVGRNNFGQLGTGHSTGDNNNDVIVPLDSIRDIFSIHFNQNN 162
Query: 135 SSAITVDGELYMWGKNSNGQLGLG-------KKAAKVIPIPTKVECLSGIFTKQAALGFE 187
S AI +G +Y WG N+ GQLG+G K+A +P PT V + A GF
Sbjct: 163 SMAIAKNGSVYTWGNNAKGQLGIGNNNNPNPKEAGDRLP-PTLVPGIDDAV--MGAYGFN 219
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
++ + G ++S+G G+LG+G+ + ++ P + L V I AG
Sbjct: 220 HALILKSDGTLVSFGQNNVGQLGNGE----VNLNVNSFSTNPVAVVNLRDVIQVI--AGS 273
Query: 248 LHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
HSA + ENG VY++G + L P + L +++ G H L
Sbjct: 274 EHSAALTENGEVYVWGKNQYGNLGNGRLSAANTVQSTPVKVEGLSGIKQIANGRDHILAL 333
Query: 304 TSGGELYTWGSNENGCLGIG 323
S G++Y+WG N +G LGIG
Sbjct: 334 ASDGKIYSWGLNASGQLGIG 353
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-----VIPIPTKVECLSGIFTK 180
++S G HS + +G +Y G+N+ GQLG G ++P+ + + S F +
Sbjct: 102 TKLSAGAAHSGFLK-NGNVYTVGRNNFGQLGTGHSTGDNNNDVIVPLDSIRDIFSIHFNQ 160
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
S+A+ G V +WG G+LG G ++ + P L+ ++
Sbjct: 161 N------NSMAIAKNGSVYTWGNNAKGQLGIGNNNNPNP-KEAGDRLPPTLVPGID--DA 211
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-----HARRPSLISKLPYSEEVVC 295
+ A GF H+ + +G + FG V ++ E N + P + L +V+
Sbjct: 212 VMGAYGFNHALILKSDGTLVSFGQNNVGQLGNGEVNLNVNSFSTNPVAVVNLRDVIQVIA 271
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H+ LT GE+Y WG N+ G LG G
Sbjct: 272 GSEHSAALTENGEVYVWGKNQYGNLGNG 299
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 287 VWGKNQYGNLGNGRLSAANTVQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 344
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI + + P+ L + G S +I GE+ WG N N L
Sbjct: 345 NASGQLGIGGSGFPNPTPIPTQVLNITNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 404
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 405 AIGETNTSKVYEPNK--AVVGIENVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 458
>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
(RCC1) repeat [Roseburia intestinalis XB6B4]
Length = 1546
Score = 110 bits (274), Expect = 1e-21, Method: Composition-based stats.
Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 29/282 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ YG++G G+ E R++P + H + A++ G H+ +T+ G +Y G ND G
Sbjct: 810 MWGSNVYGQIGDGTTEDRYKP---TKILDHVI-AVSLGYCHSGAITQDGSLYMWGSNDSG 865
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
Q+G G + + + + + V+ +S G HS AIT DG LYMWG NS G G+G
Sbjct: 866 QIGD----GTTEDRYKPTKILDHVIAVSLGVSHSGAITQDGSLYMWGSNSRG--GIGDGT 919
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+V PTK+ L + G S A+T G + WG+ G +G G E
Sbjct: 920 TEVRYKPTKI--LDHVIAVSLQTG--NSGAITQDGSLYMWGSNVYGEIGDGTEED----- 970
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
Y P I + V + G HS I ++G +Y++G ++ +G R
Sbjct: 971 ----RYKPTKILD----HVIAVSLGDDHSGAITQDGSLYMWGRNYYGEI--GDGTEEDRY 1020
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + V G H+ +T G LY WG N +G +G G
Sbjct: 1021 KPTKILDHVIAVSLGVGHSGAITQDGSLYMWGWNSDGQIGDG 1062
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 29/282 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG D+G++G G+ ++R++P + H + +++ G ++ +T+ G +Y G N +G
Sbjct: 762 MWGVNDFGQIGDGTTKNRYKP---TKILDHVV-SVSLGDYYSGAITQDGSLYMWGSNVYG 817
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
Q+G G + + + + + V+ +S GY HS AIT DG LYMWG N +GQ+G G
Sbjct: 818 QIGD----GTTEDRYKPTKILDHVIAVSLGYCHSGAITQDGSLYMWGSNDSGQIGDGTTE 873
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ PTK+ L + +LG S A+T G + WG+ G +G G
Sbjct: 874 DRY--KPTKI--LDHVIA--VSLGVSHSGAITQDGSLYMWGSNSRGGIGDG--------- 918
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T+E + K L+ V G +S I ++G +Y++G ++ +G R
Sbjct: 919 --TTEVRYKPTKILDHVIAVSLQTG--NSGAITQDGSLYMWGSNVYGEI--GDGTEEDRY 972
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + V G H+ +T G LY WG N G +G G
Sbjct: 973 KPTKILDHVIAVSLGDDHSGAITQDGSLYMWGRNYYGEIGDG 1014
Score = 95.5 bits (236), Expect = 3e-17, Method: Composition-based stats.
Identities = 75/250 (30%), Positives = 117/250 (46%), Gaps = 25/250 (10%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
+ L+ G H+ + + G +Y G+NDFGQ+G G + + + + VV +S G +
Sbjct: 742 QVLSLGDYHSGVIAQDGSLYMWGVNDFGQIG----DGTTKNRYKPTKILDHVVSVSLGDY 797
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+S AIT DG LYMWG N GQ+G G + PTK+ L + +LG+ S A+T
Sbjct: 798 YSGAITQDGSLYMWGSNVYGQIGDGTTEDRY--KPTKI--LDHVIA--VSLGYCHSGAIT 851
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G + WG+ SG++G G + Y P I + V + G HS I
Sbjct: 852 QDGSLYMWGSNDSGQIGDGT---------TEDRYKPTKILD----HVIAVSLGVSHSGAI 898
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
++G +Y++G + + +G R L + V ++ +T G LY WG
Sbjct: 899 TQDGSLYMWGSNSRGGI--GDGTTEVRYKPTKILDHVIAVSLQTGNSGAITQDGSLYMWG 956
Query: 314 SNENGCLGIG 323
SN G +G G
Sbjct: 957 SNVYGEIGDG 966
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ YG +G G+ E R++P + H + A++ G H+ +T+ G +Y G N +G
Sbjct: 954 MWGSNVYGEIGDGTEEDRYKP---TKILDHVI-AVSLGDDHSGAITQDGSLYMWGRNYYG 1009
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
++G G + + + + V+ +S G HS AIT DG LYMWG NS+GQ+G G
Sbjct: 1010 EIGD----GTEEDRYKPTKILDHVIAVSLGVGHSGAITQDGSLYMWGWNSDGQIGDGTTK 1065
Query: 162 AKVIP 166
A+ P
Sbjct: 1066 ARYTP 1070
Score = 45.4 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+++ +LG S + G + WG G++G G + + Y P I +
Sbjct: 740 YSQVLSLGDYHSGVIAQDGSLYMWGVNDFGQIGDGT---------TKNRYKPTKILD--- 787
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
V + G +S I ++G +Y++G ++ +G R L + V G
Sbjct: 788 -HVVSVSLGDYYSGAITQDGSLYMWGSNVYGQI--GDGTTEDRYKPTKILDHVIAVSLGY 844
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
H+ +T G LY WGSN++G +G G
Sbjct: 845 CHSGAITQDGSLYMWGSNDSGQIGDG 870
>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 388
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 16/279 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG L+ P + S+ +LACGGAH + LT G V + G + GQ
Sbjct: 23 WGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQ 82
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + SL P ++ L + +S G+ HS ++ +G ++ G S GQLG G A
Sbjct: 83 LGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHA 142
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ KV C +Q A G S+ + G +V +G+G G+LG +
Sbjct: 143 SHCSPV--KVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSND------- 193
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
R S P+++ EGV++ AA HSA + +G VY +G F+ AR P
Sbjct: 194 RVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGRG------FKGFEDARVP 247
Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ +V G H ++ GE+ G N G L
Sbjct: 248 QCLNSSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGVL 286
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 109/224 (48%), Gaps = 16/224 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G +G+LG G S PV S F ++ +ACG H+L L + VY G GQL
Sbjct: 129 GDGSFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQL 188
Query: 104 GISENIGYSLE-PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
G+S + S+ P +SG + E+ I+ HS+A++VDG +Y WG+ G K
Sbjct: 189 GVSNDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGR--------GFKG 240
Query: 162 AKVIPIPTKVECLSGI--FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P +CL+ FTK ALG+ ++A++G G+V G G L Q S
Sbjct: 241 FEDARVP---QCLNSSLNFTK-VALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAK 296
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L E + L+G K+ A G HS + E+G + +G
Sbjct: 297 HLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWG 340
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS--LEPLRISGLKK------ 123
+ +A G H L ++ G V G N G L +NI + L LR L+K
Sbjct: 255 NFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLEKVPGLDG 314
Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
++ I+TG HS +T GE+ WG +GQLGLG ++ P+
Sbjct: 315 TKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDRISPV 359
>gi|403333599|gb|EJY65911.1| hypothetical protein OXYTRI_13931 [Oxytricha trifallax]
Length = 1207
Score = 110 bits (274), Expect = 1e-21, Method: Composition-based stats.
Identities = 75/239 (31%), Positives = 114/239 (47%), Gaps = 13/239 (5%)
Query: 92 VYATGLNDFGQLGISENIG----YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
V++ G + FGQLG+ + I + + P R + Q+S G HS IT +Y
Sbjct: 65 VFSWGSDKFGQLGLGKQISSQKQFHMVP-RFCSYNIPITQVSCGTSHSVFITSSQLIYSM 123
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N GQLG+ + P VE L Q + G ++A+ G+V SWG+ +G
Sbjct: 124 GSNLQGQLGIDDPYTQQKSSPVLVELLVNHKPIQISCGNNHTLALMRDGEVYSWGSNENG 183
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
+ G G + ++ P+++K + + +K +G HS +DE GR+++ G
Sbjct: 184 QCGSGASP-----FHTVVQWAPKIVKFDDYQRPFIKQIDSGAFHSGFVDEIGRLFMCGKG 238
Query: 266 AVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ P ISK+P +EV CG HT VLT GE+YT GSN G LG G
Sbjct: 239 DQGQLGNMSYQDELSPFYISKIPEKIQEVACGDDHTVVLTRNGEIYTMGSNSRGQLGTG 297
Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats.
Identities = 82/294 (27%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-----PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG+ +G+LGLG S + P CS + ++CG +H++F+T + +Y+ G
Sbjct: 68 WGSDKFGQLGLGKQISSQKQFHMVPRFCSY--NIPITQVSCGTSHSVFITSSQLIYSMGS 125
Query: 98 NDFGQLGISENIGYSLE---PLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
N GQLGI + Y+ + P+ + L + +QIS G +H+ A+ DGE+Y WG N NG
Sbjct: 126 NLQGQLGIDDP--YTQQKSSPVLVELLVNHKPIQISCGNNHTLALMRDGEVYSWGSNENG 183
Query: 154 QLGLGKKAAKVI----PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
Q G G + P K + F KQ G S V G++ G G G+L
Sbjct: 184 QCGSGASPFHTVVQWAPKIVKFDDYQRPFIKQIDSGAFHSGFVDEIGRLFMCGKGDQGQL 243
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G+ + E +P I ++ K++ A G H+ + NG +Y G + +
Sbjct: 244 GN---------MSYQDELSPFYISKIPE-KIQEVACGDDHTVVLTRNGEIYTMGSNSRGQ 293
Query: 270 MLFQEGNHARR----PSLISKLPYSEEV-VCGGYHTCVLTSGGELYTWGSNENG 318
+ G + R P L+ +L + + G + L+ +LY WG G
Sbjct: 294 L--GTGPSSSRGSNVPVLLQELNFIRMTRIRAGQFSASLSVDNQLYLWGCGTFG 345
Score = 88.2 bits (217), Expect = 5e-15, Method: Composition-based stats.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 44 GNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
G+ G+LG+ + + PV+ H ++CG HTL L G VY+ G N+ G
Sbjct: 124 GSNLQGQLGIDDPYTQQKSSPVLVELLVNHKPIQISCGNNHTLALMRDGEVYSWGSNENG 183
Query: 102 QLGISEN-----IGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQL 155
Q G + + ++ + ++ ++ + QI +G HS + G L+M GK GQL
Sbjct: 184 QCGSGASPFHTVVQWAPKIVKFDDYQRPFIKQIDSGAFHSGFVDEIGRLFMCGKGDQGQL 243
Query: 156 GLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G ++ P IP K++ + A G + +V +T G++ + G+ G+LG
Sbjct: 244 GNMSYQDELSPFYISKIPEKIQ--------EVACGDDHTVVLTRNGEIYTMGSNSRGQLG 295
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G SS R ++ P L++EL +++ +I A F SA + + ++Y++G
Sbjct: 296 TGPSSS-----RGSN--VPVLLQELNFIRMTRIRAGQF--SASLSVDNQLYLWGCGT--- 343
Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F E R + L ++ + VLT G +YTWG N+ G LG+
Sbjct: 344 --FGEFFTPHRVKSVQNLELADFQLGKSGFLTVLTRQGSVYTWGINDMGQLGL 394
Score = 82.4 bits (202), Expect = 3e-13, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 38/268 (14%)
Query: 43 WGNGDYGRLGLGSLE----SRWRPVVCS--AFEKHSLKALACGGAHTLFLTETGCVYATG 96
WG+ + G+ G G+ +W P + +++ +K + G H+ F+ E G ++ G
Sbjct: 177 WGSNENGQCGSGASPFHTVVQWAPKIVKFDDYQRPFIKQIDSGAFHSGFVDEIGRLFMCG 236
Query: 97 LNDFGQLGISENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
D GQLG N+ Y L P IS + +++ +++ G H+ +T +GE+Y G NS GQ
Sbjct: 237 KGDQGQLG---NMSYQDELSPFYISKIPEKIQEVACGDDHTVVLTRNGEIYTMGSNSRGQ 293
Query: 155 LGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
LG G +++ +P ++ L+ I T+ A F S++V ++ WG G G
Sbjct: 294 LGTGPSSSRGSNVPVLLQELNFIRMTRIRAGQFSASLSVD--NQLYLWGCGTFGEF---- 347
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKV---KIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
+TP +K ++ +++ ++ +GFL + G VY +G + ++
Sbjct: 348 -------------FTPHRVKSVQNLELADFQLGKSGFL--TVLTRQGSVYTWGINDMGQL 392
Query: 271 LFQEGNHARRPSLISKLPYSE--EVVCG 296
++ P + L ++ CG
Sbjct: 393 GLRDSIQRSTPHRVEALDGKRVTQITCG 420
>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
Length = 527
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 283 KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 27/291 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + V A E +S++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P R+ L ++ Q + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+G+ + I IP + C + +Q A G SV +T G V +WG +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ + P ++ LE V I A G H+ ++E+GR+ +G+ ++ +
Sbjct: 177 PWPPGDIKQI--FVPVRVQGLE--NVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L ++ GG+H+ LT GE+Y WG E+G LG G
Sbjct: 233 TQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFG 283
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 4/162 (2%)
Query: 54 GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
G ++ + PV E S+ +A G H L L E G + A G N++GQLG + S
Sbjct: 181 GDIKQIFVPVRVQGLENVSI--IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS- 237
Query: 114 EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P+ + GL +V I+ G HS+A+T GE+Y WG+ +G+LG G +P KV
Sbjct: 238 HPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVN 297
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
L+ Q + G SVA+T G++ S+G G GRLG+G++
Sbjct: 298 LLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + PV + +L +A GG H+ LT+ G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P +++ L +E ++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 161 AAKVIP--IPTKVECLSGIFT 179
P +P + G F
Sbjct: 340 VTTGQPLELPIMIPPPEGSFN 360
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 62/170 (36%), Gaps = 53/170 (31%)
Query: 198 VLSWGAGGSGRLGHG-------------------------------------------QE 214
+++WG+G G+LG G +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 215 SSILGFLRST-SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-----D 268
LG T +E P +K L VK+ AA G H +D+ GR Y +G +
Sbjct: 67 RGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126
Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGS 314
+ + G RR +I K + +V GG H+ VLT G ++TWG
Sbjct: 127 PLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
>gi|42573750|ref|NP_974971.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332010006|gb|AED97389.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 383
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 139/296 (46%), Gaps = 26/296 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG GD GRLG G S + P + FE+HS++ +A GG H++ LT G V+ G FG
Sbjct: 54 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 113
Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L P R+ ++ I+T H++AIT GELYMWG+
Sbjct: 114 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172
Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ +P+KV+ L+ + GF ++A+T G++ +WGA + LG G
Sbjct: 173 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 229
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ + P + LEGV++ A G HS + E G+V +G ++
Sbjct: 230 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 282
Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCV-------LTSGGELYTWGSNENGCLGI 322
+ + P+ I L + V GG + LT GGEL+ WG+ ++ LG+
Sbjct: 283 RNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAKDFQLGV 338
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
+ IS G HS +T+DG+L++WGK G+LG G++ + +P L+ +F + +
Sbjct: 35 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 87
Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
ALG SVA+T G V +WG GG G LGH T E PR + + K+
Sbjct: 88 IALGGLHSVALTHQGDVFTWGYGGFGALGHK---------VYTRELVPRRVDDSWDCKIS 138
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVD-------KMLFQEGNHARRPSLISKLPYS-EEV 293
A H+A I E+G +Y++G D EG PS + L V
Sbjct: 139 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 198
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CGG+ T LT G+L+ WG+N N LG G
Sbjct: 199 SCGGFFTMALTKEGQLWNWGANSNYELGRG 228
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 121/247 (48%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q +AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQPLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TDNGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WG+N+
Sbjct: 733 SWGNNDQ 739
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2775 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2834
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2835 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2892
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2893 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2949
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 2950 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 2998
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2999 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3030
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2721 GEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2780
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2781 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2839
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2840 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2893
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2894 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2948
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 2949 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 2996
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 23/247 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ P+L++ L+G KV AAG H + E+ V+ +G+ D+ +
Sbjct: 696 EHV---------RYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNN--DQCQHFD 744
Query: 275 GNHARRP 281
H +P
Sbjct: 745 TLHQTKP 751
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VVQ++ G A+TV+G++Y G+ +NG+LGLG + V PIP +V LS K+ A+
Sbjct: 2698 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTV-PIPRQVTALSSYVVKKVAV 2756
Query: 185 --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G + A+T GKV SWG G G+LGH F R + PRLI+ L+ +++
Sbjct: 2757 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 2807
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY-- 298
A G HSA + +G +Y +G ++ + +P ++ L +V CG
Sbjct: 2808 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2867
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
T LT G +++WG + G LG G
Sbjct: 2868 QTLALTDEGLVFSWGDGDFGKLGRG 2892
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 123/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ + +AC L L+ G VY N +L P + GL
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + +NG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +++ L VV+ + +G H
Sbjct: 2703 GGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRH 2762
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2763 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2820
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2821 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2871
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2872 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2931
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2932 TWGKGDYFRLGHG 2944
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 113/263 (42%), Gaps = 25/263 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3742 WGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGR 3801
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 3802 LGHSDSED-QLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3860
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P+ + G S ++ G G RLGHG + +
Sbjct: 3861 SDGCKVPMKVPLSLRVG----------RPSTPPPSWPRLDVGGKGDYHRLGHGSDDHV-- 3908
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E G VY +GD ++ N +
Sbjct: 3909 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQ 3961
Query: 280 RPSLISKLP--YSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 3962 RPRLVAALQGRKVNRVACGSAHT 3984
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 143/335 (42%), Gaps = 69/335 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3636 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3693
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ S LE ++ ++K V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3694 GRLGVGGTESVSAPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3751
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P VE L G A G S VT G + +WG G GRLGH
Sbjct: 3752 HGNRSP--CDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSD--- 3806
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKM---- 270
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3807 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3860
Query: 271 ------------------------------LFQEGNHAR----------RPSLISKLPYS 290
+ +G++ R RP + L
Sbjct: 3861 SDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGK 3920
Query: 291 EEV-VCGGYHTCV-LTSGGELYTWGSNENGCLGIG 323
+ + + G CV T GE+YTWG N+ G LG G
Sbjct: 3921 KVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDG 3955
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
I +P+ E LS + Q A G + AVT GKV + G +GRLG G S + R
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQV 2743
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
+ + ++K KV + + G H+ + +G+V+ +G+ K+ + +P LI
Sbjct: 2744 TALSSYVVK-----KVAVHSGGR-HATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 2797
Query: 285 SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L ++ CG H+ LTS GELYTWG E G LG G
Sbjct: 2798 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 2838
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 93/239 (38%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3631 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3689
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F ++ A+ G + +A++ G+V SWG G+
Sbjct: 3690 YGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3749
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+++ L G +V AAG HSAC+ G +Y +G
Sbjct: 3750 LGHGNRSPC---------DRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYG 3800
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 3801 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3859
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G GDY RLG GS + RP + + A+A G H + TE G VY G ND GQL
Sbjct: 3893 GKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQL 3952
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
G P ++ L+ ++V +++ G H+ A
Sbjct: 3953 GDGTTNAIQ-RPRLVAALQGRKVNRVACGSAHTLA 3986
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 59/143 (41%), Gaps = 27/143 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + A + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
F L ++ EP + GL K +V I+ G S + W S +GL
Sbjct: 742 HFDTLHQTKP-----EPSLLPGLDTKHIVGIACGPAQS---------FAWSSCSEWSVGL 787
Query: 158 GKKAAKVIPIPTKVECLSGIFTK 180
+P V+ SG F +
Sbjct: 788 R--------VPFVVDVCSGTFEQ 802
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 3944 WGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGSAHTL 3985
>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
porcellus]
Length = 531
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P ++
Sbjct: 223 -TPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPEHIMV 281
Query: 285 SKLPYSEEVVCGGYH-TCVLTSGGELYTWG 313
K E C H + T GG +Y WG
Sbjct: 282 EKERVVEIAACHSTHISAAKTQGGHVYMWG 311
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPM--RVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PEHIMVEKERV-VEIAACHSTHISAAKTQGGHVYMWG 311
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P+ +A + + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLNPEHIMVEKERVVEIAACHSTHISAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 317 -SVTLPHLTHFSCTDDVF 333
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEVASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLG 216
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 135/267 (50%), Gaps = 25/267 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + P + F+ ++ ++CG +H+ + +G +Y GL ++G+
Sbjct: 2533 WGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGR 2592
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N + L+P ++ V+ I+ G + A+T DG ++ WG G+LG G
Sbjct: 2593 LGHGDNYTH-LKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGG 2651
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P P VE L G + A G + S+A++ G V +WG G RLGHG ++ +
Sbjct: 2652 SEGCSVPNP--VEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHV-- 2707
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P+++ L G K+ A G LH + ++G+V+ +GD Q+GN+
Sbjct: 2708 -------RKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHG----QQGNNTT 2756
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHT 300
RRP L++ L + V CG H+
Sbjct: 2757 TVNRRPQLVNGLEGQKITRVACGSSHS 2783
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 120/247 (48%), Gaps = 17/247 (6%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
G H L LT G VY+ G D G+LG + EP ++GL K+V++IS G HS+A+
Sbjct: 26 GKHFLALTREGEVYSWGSGDGGKLGHGDTSPRE-EPTLVTGLAGKQVIRISCGSTHSAAV 84
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGG 196
T +GELY WG+ + G+LG G +++P+ V L G I G ++A G
Sbjct: 85 TSEGELYTWGRGNYGRLGHGSSEDQLVPV--LVSGLRGHHIIDVACGSGDAHTLAAADDG 142
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
V SWG G G+LG G S P+ I+ L+G+ V G S + +
Sbjct: 143 TVWSWGDGDYGKLGRGG---------SDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRD 193
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
G V+ +G ++ +H R P L+ L + +V G H LT GE+Y WG
Sbjct: 194 GSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGR 253
Query: 315 NENGCLG 321
N+ G LG
Sbjct: 254 NDQGQLG 260
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP V A + ++CGG+H+ +T+ +Y G +G+
Sbjct: 3465 WGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGR 3524
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 3525 LGHGDSED-QLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRG- 3582
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP KVE L G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3583 -GSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHV-- 3639
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G KV A G LH + G VY +GD ++ N
Sbjct: 3640 -------RRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIA 3692
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 3693 RPRLVTALQGKKISRVACGSAHT 3715
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 116/254 (45%), Gaps = 17/254 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H + L+ G VY+ G D G+LG N P I L+ K V+ IS G
Sbjct: 3445 AVHSGGKHAMALSADGDVYSWGEGDDGKLGHG-NRNSCDRPRVIEALRGKGVIDISCGGS 3503
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
HS+ IT + ELY WGK G+LG G +++P VE L G + G Q++
Sbjct: 3504 HSACITQNHELYTWGKGRYGRLGHGDSEDQLLP--KVVEALRGNRVIDVACGSGDAQTLC 3561
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P ++ L G+ V G S
Sbjct: 3562 LTDDDCVWSWGDGDYGKLGRGG---------SDGCKIPMKVESLIGLGVSKVECGSQFSV 3612
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ +G VY +G ++ +H RRP ++ L + + G H T GE+
Sbjct: 3613 ALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEV 3672
Query: 310 YTWGSNENGCLGIG 323
YTWG N+ G LG G
Sbjct: 3673 YTWGDNDEGQLGDG 3686
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 19/226 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD G+LG G R P + + + ++CG H+ +T G +Y G ++G+
Sbjct: 41 WGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGR 100
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
L G SE+ L P+ +SGL+ ++ ++ +G H+ A DG ++ WG G+LG
Sbjct: 101 LGHGSSED---QLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGR 157
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P +E L G+ + G + S+A+T G V +WG G RLGHG E +
Sbjct: 158 G--GSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHV 215
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+L++ L+G V + G +H + + G VY +G
Sbjct: 216 ---------RHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWG 252
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 126/286 (44%), Gaps = 20/286 (6%)
Query: 44 GNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG L + P ++ ++ GG H + LT G +++ G +
Sbjct: 2479 GESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGED 2538
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + P I K V+ +S G HS+AI GELY WG G+LG G
Sbjct: 2539 GKLGHGNRMNCD-HPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGD 2597
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+ P KV+ + A G Q++A+T G V SWG G G+LG G
Sbjct: 2598 NYTHLKP--KKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGG---- 2651
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P +++L+G V A G S + +G V+ +G ++ H
Sbjct: 2652 -----SEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTH 2706
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
R+P ++ L + +V G H +T G+++ WG N++G G
Sbjct: 2707 VRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQG 2752
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG SLE + + S++ + GG TLF +T G VYATG
Sbjct: 3359 WGHNHRGQLG--SLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGYGHG 3416
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG+ + LE L+ ++K V + +G H+ A++ DG++Y WG+ +G+LG
Sbjct: 3417 GRLGLGGTDTVTSIKMLESLQHVVVRK--VAVHSGGKHAMALSADGDVYSWGEGDDGKLG 3474
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G + + P +E L G + G S +T ++ +WG G GRLGHG
Sbjct: 3475 HGNRNS--CDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGD--- 3529
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P++++ L G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3530 ------SEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGG 3583
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P + L +V CG + LT G +YTWG + LG G
Sbjct: 3584 SDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHG 3634
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 122 KKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
K E+VQ+ T H A+T +GE+Y WG G+LG G + + PT V L+G
Sbjct: 14 KCEIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPR--EEPTLVTGLAGKQV 71
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ + G S AVT G++ +WG G GRLGHG S + P L+ L G
Sbjct: 72 IRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGS---------SEDQLVPVLVSGLRGHH 122
Query: 240 VKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVC 295
+ A +G H+ ++G V+ +GD K+ + + P I +L +V C
Sbjct: 123 IIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYC 182
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G + LT G ++TWG E LG G
Sbjct: 183 GAQFSLALTRDGSVWTWGKGEGFRLGHG 210
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++++WG N QLG G K +K I +P E + + +Q A G + AV+ GKV + G
Sbjct: 2422 KVFVWGLNDKDQLG-GLKGSK-IKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACG 2479
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVY 260
+GRLG LG L S + PR I+ L V+ + +G H+ + G+++
Sbjct: 2480 ESTNGRLG-------LGPL-SANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLF 2531
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENG 318
+G+ K+ + P LI S ++ CG H+ + S GELYTWG E G
Sbjct: 2532 SWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYG 2591
Query: 319 CLGIG 323
LG G
Sbjct: 2592 RLGHG 2596
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 89/186 (47%), Gaps = 15/186 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG N GQLG + AKV +P +E L+ I Q G + AVT GKV +
Sbjct: 3354 GTIYGWGHNHRGQLG-SLEGAKV-KLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYAT 3411
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G ++ ++++ L+ V V+ A +G H+ + +G V
Sbjct: 3412 GYGHGGRLGLGGTDTVTSI---------KMLESLQHVVVRKVAVHSGGKHAMALSADGDV 3462
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ N RP +I L ++ CGG H+ +T ELYTWG
Sbjct: 3463 YSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRY 3522
Query: 318 GCLGIG 323
G LG G
Sbjct: 3523 GRLGHG 3528
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 24 LGICKRW----ISSTLQRRFAA-LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
LG+CK + S L R + WG G+ RLG G+ + P + A + + ++
Sbjct: 175 LGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSV 234
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSA 137
G H L LT+ G VY G ND GQLG + EP +SGL K +V I+ G S A
Sbjct: 235 GSIHCLALTDAGEVYCWGRNDQGQLG-DIDCQIRPEPTLVSGLASKGIVGIACGPAQSFA 293
Query: 138 ITVDGE 143
+ G+
Sbjct: 294 WSCAGQ 299
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ D G+LG G+ + RP + +A + + +ACG AHT+ + V A L D
Sbjct: 3675 WGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAWSTCKPVNAGRLPD 3731
>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 561
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 127/286 (44%), Gaps = 17/286 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R PV ++ A+A G H+L +T TG V A GLN GQ
Sbjct: 117 WGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQ 176
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
L S P+ + V ++ G HS A+T G + WG NS+GQLG G
Sbjct: 177 LYDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGTTT 236
Query: 162 AKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V+ +G + AA S+AVT G +L+WGA +G+LG G
Sbjct: 237 PRSTPV--AVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQLGDGTI------ 288
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T+ TP + G V A G HS + G + +G ++ +
Sbjct: 289 ---TNRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGSTTSSST 345
Query: 281 PSLISKLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + LP V V GG H+ LTS G + WG N +G LG G
Sbjct: 346 PVAV-DLPAGTTVTAVAGGAGHSLALTSTGTMLAWGFNTSGQLGDG 390
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 19/287 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +LG G+ +R PV ++ A+A G H+L +T G V A G N GQ
Sbjct: 65 WGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQ 124
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG S P+ + V ++ G HS A+T G + WG N GQL G
Sbjct: 125 LGDGTTTPRS-TPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTT 183
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P V+ +G A G S+A+T G VL+WGA SG+LG G
Sbjct: 184 TNSS-TPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGT-------- 234
Query: 222 RSTSEYTPRLIKELEG-VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+T TP + G IAA+ HS + G + +G ++ +G R
Sbjct: 235 -TTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQL--GDGTITNR 291
Query: 281 PSLIS-KLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ LP V G H+ +TS G + WG N +G LG G
Sbjct: 292 STPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDG 338
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCS-AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG G+ R PV A +H+L +T TG + A G N G
Sbjct: 222 WGANSSGQLGDGTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTG 281
Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG I P+ + V ++TG HS A+T G + WG N +GQLG G
Sbjct: 282 QLG-DGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGST 340
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ V+ +G A G S+A+T G +L+WG SG+LG G S
Sbjct: 341 TSSSTPV--AVDLPAGTTVTAVAGGAGHSLALTSTGTMLAWGFNTSGQLGDGTTS----- 393
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
+ TP + A G HS +
Sbjct: 394 ----NRSTPIATDLPADTTITAIAGGSFHSLAV 422
>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 531
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPAHIMVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 283 KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLNPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T + C +F
Sbjct: 317 -SVILPHLTHLSCTDDVF 333
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T D E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEALYVTDDDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK KV A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IK-----KVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 131/286 (45%), Gaps = 15/286 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG +E P ++K +ACG HTLFLT +G VYA G ND
Sbjct: 10 WGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSNDH 69
Query: 101 GQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L VVQI+ G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P V L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 127 D-QDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEV-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ V A G HS I ++ V+ +G ++ +
Sbjct: 184 ----THSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRS 239
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 92/193 (47%), Gaps = 22/193 (11%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T ELY WG S+GQLGLG + I P++V KQ A G ++ +T G+
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V + G+ +LGH + P LI EL V A G HS + E G
Sbjct: 61 VYACGSNDHSQLGHDLPTK-----------RPLLIPELLDYVVVQIACGSRHSMALSEWG 109
Query: 258 RVYIFGD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
+V +GD +A D+ + Q R+ L+SK ++ CG H+ LTS GELY
Sbjct: 110 QVLSWGDNDCGQLGQATDQDIVQLPKIVRQ--LVSKTVV--QIACGNNHSLALTSCGELY 165
Query: 311 TWGSNENGCLGIG 323
+WGSN G LG+
Sbjct: 166 SWGSNIYGQLGVN 178
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 55/223 (24%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ D G+LG + + + P + ++ +ACG H+L LT G +Y+ G N +G
Sbjct: 114 WGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 102 QLGIS--ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG++ + + +S +P+R++ L V I+ G +HS I+ ++ WG+N+ GQLGL
Sbjct: 174 QLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLN 233
Query: 159 KKAAKVIP--------------------------------------------------IP 168
+ ++ P +P
Sbjct: 234 DETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEMLP 293
Query: 169 TKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLG 210
V L G Q A G ++A V G+V +G G SG+LG
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLG 336
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL SR P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG L + + + + Q++ G H+ A+ G +Y +G S+GQ LG ++
Sbjct: 282 LGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ--LGTRS 339
Query: 162 AKVIPIPTKV 171
K + +P V
Sbjct: 340 TKSLTLPQVV 349
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 134/287 (46%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P +A +H ++ +A GG H L LT G V++ G D G
Sbjct: 2756 GEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDG 2815
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + P I L V ++ G +HS+A+T GELY WG G+LG G
Sbjct: 2816 KLGHGDVTSLD-TPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDN 2874
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P +VE L G Q + G Q++A+ GG V SWG G G+LG G
Sbjct: 2875 LTQLTP--KRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGG----- 2927
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S +P L+ +L G+ V G S + NG VY +G ++ H
Sbjct: 2928 ----SEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHV 2983
Query: 279 RRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R P+L+ L + V G H +T G+++ WG N++G G G
Sbjct: 2984 RWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNG 3030
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 118/256 (46%), Gaps = 19/256 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G + G+LG + P I L+ K+VV ++ G
Sbjct: 3705 AVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCD-RPRIIESLRGKDVVDVACGGA 3763
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
HS+AIT GELY WGK G+LG G ++ P VE L G A G Q+ A
Sbjct: 3764 HSAAITALGELYTWGKGRYGRLGHGDSDDQLKP--KLVEALLGYRVMDVACGSGDAQTCA 3821
Query: 192 VTG--GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+T GG V SWG G G+LG G S P I+ L G+ + G
Sbjct: 3822 ITDEEGGTVWSWGDGDYGKLGRGG---------SDGCKIPTKIESLSGLGIIKVECGSQF 3872
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
S + NG VY +G ++ H RRP + L + + G H V T G
Sbjct: 3873 SVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQG 3932
Query: 308 ELYTWGSNENGCLGIG 323
E+YTWG N+ G LG G
Sbjct: 3933 EVYTWGDNDEGQLGDG 3948
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 131/272 (48%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G + S P A ++ +A G H+ +T +G +Y GL ++G+
Sbjct: 2809 WGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGR 2868
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N+ L P R+ L + VVQ+S G + A+ G +Y WG G+LG G
Sbjct: 2869 LGHGDNL-TQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRG- 2926
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P V+ LSG+ G + SVA+T G V +WG G RLGHG + +
Sbjct: 2927 -GSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHV-- 2983
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P L++ L G KV + G LH + + G+V+ +GD Q+GN +
Sbjct: 2984 -------RWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHG----QQGNGSI 3032
Query: 279 ---RRPSLISKLP--YSEEVVCGGYHTCVLTS 305
RRP+L+ + V CG H+ T+
Sbjct: 3033 TVNRRPTLVQGIDGIKITRVACGSSHSVAWTA 3064
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 24/255 (9%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGY 132
GG+ +LFL T++G YA G G+LG+ S N+ P +I+ L + VV+ + +G
Sbjct: 2738 GGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVN---SPHQITALSQHVVRKVAVHSGG 2794
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
H+ A+T DG ++ WG+ +G+LG G + + P +E L+G + A G S AV
Sbjct: 2795 RHALALTADGRVFSWGEGDDGKLGHGDVTS--LDTPRCIEALNGFRVRDVAAGSNHSAAV 2852
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHS 250
T G++ +WG G GRLGHG + ++ TP+ ++ L G +V + G +
Sbjct: 2853 TSSGELYTWGLGEYGRLGHGD---------NLTQLTPKRVESLVGQRVVQVSCGSRDAQT 2903
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
+ E G VY +GD K+ P L+ KL V CG + LT G
Sbjct: 2904 LALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGH 2963
Query: 309 LYTWGSNENGCLGIG 323
+YTWG + LG G
Sbjct: 2964 VYTWGKGDYFRLGHG 2978
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 19/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ RP + + + +ACGGAH+ +T G +Y G +G+
Sbjct: 3725 WGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGR 3784
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVD--GELYMWGKNSNGQLGL 157
LG ++ L+P + L + V +G + AIT + G ++ WG G+LG
Sbjct: 3785 LGHGDS-DDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGR 3843
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + IPTK+E LSG+ + G + SVA++ G V +WG G RLGHG + +
Sbjct: 3844 G--GSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHV 3901
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
P+ + L+G KV + G LH + G VY +GD ++
Sbjct: 3902 ---------RRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTG 3952
Query: 278 ARRPSLISKLPYSE--EVVCGGYHT 300
++P L++ L + V CG HT
Sbjct: 3953 IQKPRLVAALQNKKINRVSCGSAHT 3977
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 140/294 (47%), Gaps = 29/294 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG+ G+LG P VC A LA GG TLF +T G VYATG G
Sbjct: 3619 WGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLA-GGEQTLFAITSDGRVYATGYGAGG 3677
Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+LGI S + LE L+ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3678 RLGIGGAESVTVPSLLESLQHVFVKK--VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGH 3735
Query: 158 GKKAAKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G K +P P +E L G A G S A+T G++ +WG G GRLGHG
Sbjct: 3736 GNK----LPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGD-- 3789
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI--DENGRVYIFGDRAVDKML 271
S + P+L++ L G +V A +G + I +E G V+ +GD K+
Sbjct: 3790 -------SDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLG 3842
Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P+ I L +V CG + L++ G +YTWG + LG G
Sbjct: 3843 RGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHG 3896
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 92/186 (49%), Gaps = 15/186 (8%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G++Y WG N GQLG G + AKV +PT E LS + Q A G + A+T G+V +
Sbjct: 3614 GQIYGWGHNHRGQLG-GVEGAKV-KVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYAT 3671
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
G G GRLG G S+ P L++ L+ V VK A +G H + G V
Sbjct: 3672 GYGAGGRLGIGGAESV---------TVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEV 3722
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
Y +G+ K+ RP +I L + +V CGG H+ +T+ GELYTWG
Sbjct: 3723 YSWGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRY 3782
Query: 318 GCLGIG 323
G LG G
Sbjct: 3783 GRLGHG 3788
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S+++ +Y+WG N QLG G K +K I +P V+ + A G + VT
Sbjct: 2692 SSVSGAKRVYVWGLNDKEQLG-GPKGSK-IKVPQAVDWTVSLQPISVAGGSKSLFLVTQS 2749
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAA-AGFLHSACI 253
GK + G G +GRLG G ++ +P I L + V K+A +G H+ +
Sbjct: 2750 GKAYACGEGSNGRLGLGHSRNV---------NSPHQITALSQHVVRKVAVHSGGRHALAL 2800
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYT 311
+GRV+ +G+ K+ + P I L +V G H+ +TS GELYT
Sbjct: 2801 TADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYT 2860
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 2861 WGLGEYGRLGHG 2872
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG G E RP + + +++ G H + T+ G VY G ND GQ
Sbjct: 3885 WGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQ 3944
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG G +P ++ L+ K++ ++S G H+ A
Sbjct: 3945 LGDGTTTGIQ-KPRLVAALQNKKINRVSCGSAHTVA 3979
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 13/140 (9%)
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
QS GGG++ WG G+LG + + + P + + L ++ A G
Sbjct: 3606 QSWTAVGGGQIYGWGHNHRGQLGGVEGAKV---------KVPTVCEALSALRPIQLAGGE 3656
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVL 303
I +GRVY G A ++ PSL+ L + V GG H L
Sbjct: 3657 QTLFAITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLAL 3716
Query: 304 TSGGELYTWGSNENGCLGIG 323
+S GE+Y+WG E+G LG G
Sbjct: 3717 SSEGEVYSWGEGEDGKLGHG 3736
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 19/188 (10%)
Query: 144 LYMWGKNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
+ + G+N L L AA +++P + E F K + +V+G +V W
Sbjct: 2644 IQLVGRNVGNSLPLDDSAALARLLPPDFEFEQGDSAFNKSQQSVIQPISSVSGAKRVYVW 2703
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G +LG + S I P+ + ++ A G + ++G+ Y
Sbjct: 2704 GLNDKEQLGGPKGSKI---------KVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYA 2754
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV------CGGYHTCVLTSGGELYTWGSN 315
G+ + ++ + P I+ L S+ VV GG H LT+ G +++WG
Sbjct: 2755 CGEGSNGRLGLGHSRNVNSPHQITAL--SQHVVRKVAVHSGGRHALALTADGRVFSWGEG 2812
Query: 316 ENGCLGIG 323
++G LG G
Sbjct: 2813 DDGKLGHG 2820
>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
Length = 848
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 150/328 (45%), Gaps = 31/328 (9%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L C R ++ T ++ WG GRLG G+ RP + +
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309
Query: 73 LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
+ ++CG HT +T +G ++ G + G LG + Y L P ++SG + +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS+ T G+LY +G + G LG G + + + P +VE LSG T + A G
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426
Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ TG K+ +WG G RLGHG + L P+ ++ L
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRL---------VPKCVQALLEY 477
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVC 295
A G + + +GRV+ G + + L + ++P L+ SE E+ C
Sbjct: 478 DFHQLACGHNMTVALATSGRVFTMGSSS-NGQLGNPKSDGKQPCLVQDRLASELVEEISC 536
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H VLTS E+YTWG NG LG G
Sbjct: 537 GASHVTVLTSRSEVYTWGMGANGRLGHG 564
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E R P A ++ LACG T+ L +G V+ G + GQ
Sbjct: 449 WGDGDKNRLGHGDKEPRLVPKCVQALLEYDFHQLACGHNMTVALATSGRVFTMGSSSNGQ 508
Query: 103 LGISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ G +P + L E+V +IS G H + +T E+Y WG +NG+LG G
Sbjct: 509 LGNPKSDGK--QPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGD- 565
Query: 161 AAKVIPIPTKVECLSGIFTKQAALG 185
K P VE L K + G
Sbjct: 566 -LKDRKKPCLVEALKDRHVKSISCG 589
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ S+G V+ IP +E + Q A G T
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG ++ I P+L++ L V + + G H+ +
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
+G ++ +GD + + L G P +S +V+ CG +H+ + TS G+LY
Sbjct: 326 SGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLY 385
Query: 311 TWGSNENGCLGIG 323
T+G G LG G
Sbjct: 386 TFGDGTFGVLGHG 398
>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
troglodytes]
gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Chronic lymphocytic leukemia deletion region gene 7
protein; Short=CLL deletion region gene 7 protein;
AltName: Full=Regulator of chromosome condensation and
BTB domain-containing protein 1
gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [synthetic construct]
gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 531
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 283 KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3817 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGR 3876
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 3877 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3934
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3935 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3991
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 3992 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4044
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4045 RPRLVAALQGKKINRVACGSAHT 4067
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 30/313 (9%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
+ R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +
Sbjct: 2787 IPRQITALSNYVVK---KVAVHSG-GRHAMALTVDGKIFS-WGEGDDGKLGHFSRMNCDK 2841
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 2842 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVL 2900
Query: 122 K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 2901 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQG 2958
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q G + S+A+T G V +WG G RLGHG + + P++++ L G
Sbjct: 2959 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV---------RKPQVVEGLRGK 3009
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--E 292
K+ A G LH + + G+VY +GD Q+GN R+P+L+ L +
Sbjct: 3010 KIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTTVNRKPTLVQGLEGQKITR 3065
Query: 293 VVCGGYHTCVLTS 305
V CG H+ T+
Sbjct: 3066 VACGSSHSVAWTT 3078
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3777 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3835
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT G+LY WGK G+LG G ++ P VE
Sbjct: 3836 PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKP--KLVEA 3893
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 3894 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3944
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3945 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4004
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4005 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4038
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G +++ G D
Sbjct: 2769 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 2828
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 2829 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 2887
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2888 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2941
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2942 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 2996
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 2997 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3044
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 121/243 (49%), Gaps = 26/243 (10%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKK-----EVVQISTGYHHSSAITVDGELYM 146
V+ GLND QLG G +++ + VVQ++ G A+TV+G++Y
Sbjct: 2713 VFVWGLNDKDQLG-----GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2767
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
G+ +NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G
Sbjct: 2768 CGEATNGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEG 2826
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LGH F R + PRLI+ L+ +++ A G HSA I +G +Y +G
Sbjct: 2827 DDGKLGH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGL 2877
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCL 320
++ + +P ++ L +V CG T LT G +++WG + G L
Sbjct: 2878 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 2937
Query: 321 GIG 323
G G
Sbjct: 2938 GRG 2940
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3711 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPIQLIGGEQTLFAVTADGKLYATGYGAG 3768
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3769 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3826
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 3827 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD--- 3881
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3882 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3935
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 3936 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3986
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2751 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 2810
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2811 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 2868
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2869 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2920 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2979
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2980 TWGKGDYFRLGHG 2992
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 2814
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+++ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 2815 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 2874
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 2875 WGLGEYGRLGHG 2886
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3706 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATG 3764
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3765 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3824
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G +Y +G
Sbjct: 3825 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 3875
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 3876 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3934
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 3975 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4034
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4035 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4069
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 71/187 (37%), Gaps = 42/187 (22%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +G+ +SL
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVA--VFSL-------- 406
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
+ G+++ WG G+LG G + P +E L + +
Sbjct: 407 ------------------IFGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVK 446
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G + SVA+T G+V SWG G + RLGHG E + R K LEG++
Sbjct: 447 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV------------RYPKLLEGLQAT 494
Query: 242 IAAAGFL 248
+ A L
Sbjct: 495 LPQANCL 501
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 414 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 473
Query: 103 L--GISENIGYSLEPLRISGLKKEVVQ 127
L G E++ Y P + GL+ + Q
Sbjct: 474 LGHGTEEHVRY---PKLLEGLQATLPQ 497
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 40/174 (22%)
Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P++ GL + QI+ ++ +G +YM NS+ +G+ V
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGV-------------VAV 403
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
S IF G+V SWG G G+LG G S TP+LI+
Sbjct: 404 FSLIF-----------------GQVWSWGDGDYGKLGRGG---------SDGCKTPKLIE 437
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+L+ + V G S + ++G+VY +G ++ H R P L+ L
Sbjct: 438 KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 491
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 67/177 (37%), Gaps = 47/177 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3704 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYAT 3763
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 3764 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3823
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
K+ + RP +I L E ++ GG H+ +T+ G+LYTWG G LG G
Sbjct: 3824 KLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHG 3880
>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 438
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 136/281 (48%), Gaps = 20/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG G+ P + +++A+A G +H L L G V+A G N+ GQ
Sbjct: 114 WGWNEYGQLGDGTTMDHNTPGMVGGLG--NVRAVAVGISHMLALGNDGTVWAWGKNNCGQ 171
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N+ S+ P+R+SGL + +V IS GY+H+ AI G ++ WG N GQLG G +
Sbjct: 172 LGDGTNVD-SMTPVRVSGLPR-IVAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNIS 229
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P P KV+ L+ + A G S+A+ G + +WG+ G LG G
Sbjct: 230 S--PNPKKVKGLANV--TAVAGGSSFSLALKDDGTIWAWGSNVQGELGVG---------- 275
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T++ P +K V AAG SA I +G ++++G K + G A P
Sbjct: 276 -TTKDCPLPVKVQGLTNVIRIAAGGETSAAITNDGSLWVWGHNEQGKYI-SGGEDASSPR 333
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S L + V G + L + G L+ G N+ G LG G
Sbjct: 334 RASGLSNVKLVDIGTINIIALENDGSLWVVGDNQFGQLGTG 374
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 19/261 (7%)
Query: 63 VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
V C+A + S+ +A G ++ L + G V+ G + G LG E++ P R+
Sbjct: 34 VRCAA-SQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGY-ESVQDQYVPKRVP--I 89
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
V + + + +A+ DG ++ WG N GQLG G P V L + +
Sbjct: 90 YNVTSVDSCFASVAALKDDGTVWTWGWNEYGQLGDGTTMDH--NTPGMVGGLGNV--RAV 145
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A+G +A+ G V +WG G+LG G + +R + PR++
Sbjct: 146 AVGISHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSG--LPRIVA--------- 194
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
+AG+ H+ ID+ G V+ +G ++ + P + L V G +
Sbjct: 195 ISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNISSPNPKKVKGLANVTAVAGGSSFSLA 254
Query: 303 LTSGGELYTWGSNENGCLGIG 323
L G ++ WGSN G LG+G
Sbjct: 255 LKDDGTIWAWGSNVQGELGVG 275
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 67/173 (38%), Gaps = 53/173 (30%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+ S P ++ A+A G + +L L + G ++A G N G+
Sbjct: 214 WGLNDCGQLGDGTNISSPNPKKVKGLA--NVTAVAGGSSFSLALKDDGTIWAWGSNVQGE 271
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG--------- 153
LG+ L P+++ GL V++I+ G S+AIT DG L++WG N G
Sbjct: 272 LGVGTTKDCPL-PVKVQGLTN-VIRIAAGGETSAAITNDGSLWVWGHNEQGKYISGGEDA 329
Query: 154 ----------------------------------------QLGLGKKAAKVIP 166
QLG G + +P
Sbjct: 330 SSPRRASGLSNVKLVDIGTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMP 382
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T +G ++ G +G+
Sbjct: 4062 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4121
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 4122 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4179
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4180 -GSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4236
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4237 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4289
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4290 RPRLVAALQGKKINRVACGSAHT 4312
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 155/312 (49%), Gaps = 28/312 (8%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
+ R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +
Sbjct: 3032 IPRQITALSNYVIK---KVAVHSG-GRHAMALTVDGKVFS-WGEGDDGKLGHFSRMNCDK 3086
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + ++ +ACG +H+ +T +G +Y+ GL ++G+LG +N L L
Sbjct: 3087 PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL 3146
Query: 122 KKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
V+Q++ G + A+T +G ++ WG G+LG G ++ +P +E L+G
Sbjct: 3147 GHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRG--GSEGCNVPQNIERLNGQGV 3204
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q G + S+A+T G V +WG G RLGHG + + P++++ L G K
Sbjct: 3205 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV---------RKPQMVEGLRGKK 3255
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--EV 293
+ A G LH + + G+VY +GD Q+GN R+P+L+ L + V
Sbjct: 3256 IVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTTVNRKPTLVQGLEGQKITRV 3311
Query: 294 VCGGYHTCVLTS 305
CG H+ T+
Sbjct: 3312 ACGSSHSVAWTT 3323
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 23/266 (8%)
Query: 62 PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P++ + LA G H L L+ G V++ G D G+LG + Y EP I
Sbjct: 475 PMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT-YLEEPKMIG 533
Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
K VV ++ G +S+AIT DGELY WG+ + G+LG G + P+ V
Sbjct: 534 TFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPM--VVTAF 591
Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G+ A G Q++AVT G+V SWG G G+LG G S TP+L+
Sbjct: 592 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 642
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
++L+ + + G S + ++G+VY +G ++ H R P L+ L +
Sbjct: 643 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKV 702
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNE 316
+V G H LT GE+ +WGSN+
Sbjct: 703 VDVAVGSTHCLALTDDGEVLSWGSND 728
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 119/238 (50%), Gaps = 16/238 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2958 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 3017
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + IPIP ++ LS K+ A+ G ++A+T GKV SWG G G+L
Sbjct: 3018 NGRLGLGLSSG-TIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3076
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3077 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3127
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L +V CG T LT G +++WG + G LG G
Sbjct: 3128 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRG 3185
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 134/289 (46%), Gaps = 22/289 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
G GRLGLG L S P+ +A + +K +A GG H + LT G V++ G D
Sbjct: 3014 GEATNGRLGLG-LSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGD 3072
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3073 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3131
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3132 DNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGG--- 3186
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S P+ I+ L G V G S + ++G V+ +G ++
Sbjct: 3187 ------SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3240
Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3241 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3289
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 114/254 (44%), Gaps = 17/254 (6%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
A+ GG H L L+ G VY+ G + G+LG N P I L+ EVV I+ G
Sbjct: 4042 AVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESLRGVEVVDIAAGGA 4100
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
HS+ IT GEL+ WGK G+LG G ++ P V+ L G + G Q++
Sbjct: 4101 HSACITASGELFTWGKGRYGRLGHGDSEDQLKP--KLVDALQGHRVIDVACGSGDAQTLC 4158
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T V SWG G G+LG G S P I L G+ V G S
Sbjct: 4159 LTDDDMVWSWGDGDYGKLGRGG---------SDGCKIPMKIDSLTGLGVVKVECGSQFSV 4209
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ ++G VY +G ++ +H RRP + L + + G H T GE+
Sbjct: 4210 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4269
Query: 310 YTWGSNENGCLGIG 323
YTWG N+ G LG G
Sbjct: 4270 YTWGDNDEGQLGDG 4283
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 6/171 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P+V +AF+ + +ACG A TL +TE G V++ G D+
Sbjct: 566 WGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 625
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + G L ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 626 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 685
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
+ + P ++ L G A+G +A+T G+VLSWG+ + +L H
Sbjct: 686 --EHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGS--NDKLQH 732
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G +YA G G+LG+ + G P +I+ L V++ + +G H
Sbjct: 2996 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRH 3055
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3056 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3113
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ SWG G GRLGHG +T++ P+L+K L G +V A G +
Sbjct: 3114 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3164
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3165 LTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3224
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3225 TWGKGDYFRLGHG 3237
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 125/276 (45%), Gaps = 39/276 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C A + + C L L+ +G VY+ +L P+ I L
Sbjct: 433 PIQCKALSSLGVTQIVCSEKGFLILSSSGAVYSQNYK-----------STTLAPMLIHVL 481
Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+++V+++ H A++ +GE++ WG G+LG G + P + +G
Sbjct: 482 SSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT--YLEEPKMIGTFNG-- 537
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S A+T G++ +WG G GRLGHG S + TP +
Sbjct: 538 -KQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGS---------SEDQTTPMV 587
Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+ +G+KV A +G + + ENG+V+ +GD K+ + + P L+ KL
Sbjct: 588 VTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 647
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++YTWG +N LG G
Sbjct: 648 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 683
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG +E V S +L+ + GG TLF +T G +YATG
Sbjct: 3956 WGHNHRGQLG--GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4013
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ ++K V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4014 GRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4071
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L G+ A G S +T G++ +WG G GRLGHG
Sbjct: 4072 HGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGD--- 4126
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L+ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4127 ------SEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4180
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4181 SDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4231
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 19/228 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + F KH + +ACG ++ +T G +Y G
Sbjct: 510 WGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVH-VACGSTYSAAITADGELYTWGR 568
Query: 98 NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
++G+L G SE+ + GLK V +G + A+T +G+++ WG G+L
Sbjct: 569 GNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 628
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P VE L + + G + SVA+T G+V +WG G + RLGHG +
Sbjct: 629 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 686
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L+ L+G KV A G H + ++G V +G
Sbjct: 687 HV---------RYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWG 725
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2950 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3007
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GK+ + G +GRLG G S + R + + +IK KV + + G H+ +
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIK-----KVAVHSGG-RHAMALTV 3061
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELY+WG
Sbjct: 3062 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3121
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3122 LGEYGRLGHG 3131
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 95/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3951 GTIYGWGHNHRGQLG-GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATG 4009
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F ++ A+ G + +A++ G+V SWG G+
Sbjct: 4010 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4069
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L GV+V AAG HSACI +G ++ +G
Sbjct: 4070 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4120
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 4121 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG 4179
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 679
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
L G E++ Y P + L+ K+VV ++ G H A+T DGE+ WG N Q L
Sbjct: 680 LGHGTDEHVRY---PKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTL 736
Query: 156 GLGKKAAKVIP 166
KK K +P
Sbjct: 737 FSNKKQPKALP 747
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4220 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4279
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4280 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4314
>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Homo sapiens]
Length = 531
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 283 KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRK-VCVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G V+ +G ++ + P ++ + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
leucogenys]
Length = 531
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 126/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 -TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3172 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3231
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3232 LGHGDN-ATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3290
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3291 SEGSS--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3346
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3347 -------RKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3397
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L V CG H+
Sbjct: 3398 NKKPALVIGLDAVIVNRVACGSSHS 3422
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 132/287 (45%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3119 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3178
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N +P + L+ K++ I+ G HS+AI+ GELY WG G+LG G
Sbjct: 3179 KLG-HGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3237
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V LSG Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3238 ATQLKP--KLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3290
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3291 ----SEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3346
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P I+ L V G H +T G++Y WG N++G G G
Sbjct: 3347 RKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3393
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 144/297 (48%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4219 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4276
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T DGE+Y WG+ +G+LG
Sbjct: 4277 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4335
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4336 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4389
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4390 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4439
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S KLPY E V CG + LT G +YTWG + LG G
Sbjct: 4440 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4494
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4325 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4384
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4385 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4442
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4443 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHV-- 4499
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH + G V+ +GD ++ +
Sbjct: 4500 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQ 4552
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4553 RPRLVAALQGKHIVKVTCGSAHTLALST 4580
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4305 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4362
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4363 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4420
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4421 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4471
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ H RRP ++ L + + G H + GE
Sbjct: 4472 VALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4531
Query: 309 LYTWGSNENGCLGIG 323
++TWG N+ G LG G
Sbjct: 4532 VFTWGDNDEGQLGDG 4546
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 126/253 (49%), Gaps = 20/253 (7%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ ++ G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3101 GGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3159
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G ++ + P VE L + A G S A++
Sbjct: 3160 ALALTLDGKVFSWGEGEDGKLGHGNRS--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3217
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG ++ L P+L+ L G +V A G +
Sbjct: 3218 QGELYTWGLGEYGRLGHGDNATQL---------KPKLVAALSGRRVIQVACGSRDAQTLA 3268
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 3269 LTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3328
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3329 TWGKGDYYRLGHG 3341
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 20/249 (8%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A C G H L + Y+ G+ D +LG + L P +I L + V + G +
Sbjct: 650 AAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHAREL-PTKIESLVRLVKSVYCGCSY 708
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT+ G LY WG+ + G+LG G + +P V L ALG ++ +
Sbjct: 709 SAAITLGGNLYTWGRGTYGRLGHGTSDDQC--LPAMVMALKDHQVVDVALGSGDAHTLCL 766
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G V +WG G G+LG+G +S L P+LI L V+ A A F S
Sbjct: 767 TSEGLVFAWGDGDYGKLGNGSCNSSL---------LPQLIDCLPRVQRVFAGAQF--SLA 815
Query: 253 IDENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ G++Y +G + +++ + P LI+ L + +V G H L+S GE
Sbjct: 816 LSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGE 875
Query: 309 LYTWGSNEN 317
++ WG N+N
Sbjct: 876 IFGWGRNDN 884
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 112/262 (42%), Gaps = 38/262 (14%)
Query: 70 KHSLKALACGGAHTLFLTETGCVY----ATGLNDFGQLGISENIGYSLEPLRISGLKKEV 125
K L+ +AC L L++ G +Y A + QL +E +
Sbjct: 599 KFQLQQVACSEDVVLLLSKEGKLYNWHIAKPEAEPQQLDFAEIANETF------------ 646
Query: 126 VQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
IS H H A+ + Y WG + +LG G A+ +PTK+E L + K
Sbjct: 647 --ISIAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHAR--ELPTKIESLVRL-VKS 701
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G S A+T GG + +WG G GRLGHG S + P ++ L+ +V
Sbjct: 702 VYCGCSYSAAITLGGNLYTWGRGTYGRLGHGT---------SDDQCLPAMVMALKDHQVV 752
Query: 242 IAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
A +G H+ C+ G V+ +GD K+ N + P LI LP + V G
Sbjct: 753 DVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQRVFAGAQF 812
Query: 300 TCVLTSGGELYTWGSNENGCLG 321
+ L+ G+LY+WG + CLG
Sbjct: 813 SLALSCEGQLYSWG--KASCLG 832
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + + P + A + H + AL G AHTL LT G V+A G D+
Sbjct: 721 WGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDY 780
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + + SL P I L + V ++ G S A++ +G+LY WGK S L ++
Sbjct: 781 GKLG-NGSCNSSLLPQLIDCLPR-VQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVER 838
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ +P + L A+G +A++ G++ WG + ++
Sbjct: 839 NVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQI 887
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 16/224 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD RLG G +R P + + +K++ CG +++ +T G +Y G +G+
Sbjct: 670 WGVGDSRRLGHGDCHARELPTKIESLVR-LVKSVYCGCSYSAAITLGGNLYTWGRGTYGR 728
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + L + ++ +VV ++ +G H+ +T +G ++ WG G+LG G
Sbjct: 729 LGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSC 788
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
+ ++P ++CL + ++ G + S+A++ G++ SWG LGH E ++ G
Sbjct: 789 NSSLLP--QLIDCLPRV--QRVFAGAQFSLALSCEGQLYSWGKASC--LGHQLVERNVQG 842
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
PRLI L+ ++ A G H + +G ++ +G
Sbjct: 843 C------SVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWG 880
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+ +WG N QLG G K +KV +PT +S + A G + V+ GKV + G
Sbjct: 3063 VMVWGLNDKEQLG-GLKGSKV-KVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGE 3120
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G +GRLG G ++ P + L VK A +G H+ + +G+V+
Sbjct: 3121 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3171
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ + +P L+ L + ++ CG H+ ++S GELYTWG E G
Sbjct: 3172 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3231
Query: 320 LGIG 323
LG G
Sbjct: 3232 LGHG 3235
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 91/238 (38%), Gaps = 69/238 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS---------------------------- 175
+Y WG N GQLG G + ++ I PT E LS
Sbjct: 4216 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4273
Query: 176 ------------------------GIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
+F K+ A+ G + +A+T G+V +WG G G+L
Sbjct: 4274 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKL 4333
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4334 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4384
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4385 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4442
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 139/286 (48%), Gaps = 17/286 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P + + + ++ +ACG +T+ +T+ G VY+ G ND
Sbjct: 4 WGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDH 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + G L ISG+ + + G H+ + G+L+ WG N GQLGL +
Sbjct: 64 GQLG--QEKGRKRLQL-ISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDR 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+A I P V+ L Q A G + S+A+T G++ +WG+ G+LG G ++ +
Sbjct: 121 VSA-TIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKM-- 177
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E P+L+ L V + A G H+ I ++G V+ +G ++ + +
Sbjct: 178 ------ELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRN 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S CG + LT G ++T G+ G LG G
Sbjct: 232 VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHG 277
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 134/282 (47%), Gaps = 16/282 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN D+G+LG + R R + S + + + ACG +HTL + E G +++ G N GQL
Sbjct: 59 GNNDHGQLG--QEKGRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQL 116
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ EP + L K +VQI+ G HS A+T +GELY WG NS+GQLGLG
Sbjct: 117 GLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSD-T 175
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K+ P V L+ + A G ++ ++ G V +WG G+LG L ++
Sbjct: 176 KMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLG-------LSDIQ 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ + P ++ L +V AA G S + +G V+ G ++ P
Sbjct: 229 NRN--VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPR 286
Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
I +L S ++ CG HT L S G +Y WG G LG
Sbjct: 287 QIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 96/175 (54%), Gaps = 12/175 (6%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LGLGS + +P + + + +ACGG HT+ ++++G V+A G N FG
Sbjct: 161 WGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFG 220
Query: 102 QLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+S+ N+ L LR S V + G S +T+DG ++ G GQLG
Sbjct: 221 QLGLSDIQNRNVPCQLRTLRNS----RVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGH 276
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGH 211
G K ++++P ++ L G Q + G ++A V G+V +WG GG+G+LG+
Sbjct: 277 GNKTSEILP--RQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGN 329
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG +G+LGLG + I P +V +Q A G ++AVT G+V S G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LG + L +LI ++ + + AA G H+ ++E G+++ +G
Sbjct: 61 NDHGQLGQEKGRKRL-----------QLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWG 109
Query: 264 DRAVDKM-LFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ L + R P ++ L ++ CG H+ LT+ GELY WGSN +G L
Sbjct: 110 SNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQL 169
Query: 321 GIG 323
G+G
Sbjct: 170 GLG 172
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G A H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSAPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ L+
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVLVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T G +Y WG
Sbjct: 283 KERVVEIAACHSAHTSAAKTQSGNVYMWG 311
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K+VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA ++G VY++G
Sbjct: 276 --------PAHVLVEKERV-VEIAACHSAHTSAAKTQSGNVYMWG 311
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P + K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHVLVEKERVVEIAACHSAHTSAAKTQSGNVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 317 -SVTLPHLTHFSCTDDVF 333
>gi|296445916|ref|ZP_06887867.1| regulator of chromosome condensation RCC1 [Methylosinus
trichosporium OB3b]
gi|296256584|gb|EFH03660.1| regulator of chromosome condensation RCC1 [Methylosinus
trichosporium OB3b]
Length = 492
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 133/285 (46%), Gaps = 22/285 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ +R P V + + A+A G H+ LT G V G N GQ
Sbjct: 166 WGWNQVGQLGDGTYPNRSAPGVVTRLSS-GVVAIASGDVHSCALTSVGAVKCWGSNVAGQ 224
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG Y P+ ++GL+ VV I+ G HS A+ G + WG NS+GQLG G A
Sbjct: 225 LGAGTPT-YHRTPIGVTGLRSGVVAIAGGNQHSCALATAGAVKCWGSNSHGQLGDGTTAN 283
Query: 163 KVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ V L SG+ A G+ S A+T G V+ WG +G++G G
Sbjct: 284 RATPV--AVPSLSSGVVAITA--GWGHSCALTKAGAVVCWGDNSNGQIGDGT-------- 331
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+T+ +TP ++ L V I A G H+ + NG V +G + + R
Sbjct: 332 -TTTRHTPVVVSGLTSGVVAI-ATGSNHNCALKGNGAVLCWGSN--QDGVLGDRTMTNRT 387
Query: 282 SLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ ++ VV G HTCV S G + WGS+ G LG G
Sbjct: 388 TPVAVPGHTRGVVAIALGSDHTCVTISSGVVRCWGSDGLGQLGDG 432
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 126/282 (44%), Gaps = 20/282 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LG G++ R PV S + A++ G H+ LT G V G N GQ
Sbjct: 115 WGRNDYGQLGDGTMVRRSSPVSVSGLPS-DIVAISMGDGHSCALTSAGAVECWGWNQVGQ 173
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P ++ L VV I++G HS A+T G + WG N GQLG G
Sbjct: 174 LGDGTYPNRS-APGVVTRLSSGVVAIASGDVHSCALTSVGAVKCWGSNVAGQLGAGTPTY 232
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
PI ++G+ + A+ G + S A+ G V WG+ G+LG G +
Sbjct: 233 HRTPI-----GVTGLRSGVVAIAGGNQHSCALATAGAVKCWGSNSHGQLGDGTTA----- 282
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ TP + L V I AG+ HS + + G V +GD + ++
Sbjct: 283 ----NRATPVAVPSLSSGVVAI-TAGWGHSCALTKAGAVVCWGDNSNGQIGDGTTTTRHT 337
Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P ++S L + G H C L G + WGSN++G LG
Sbjct: 338 PVVVSGLTSGVVAIATGSNHNCALKGNGAVLCWGSNQDGVLG 379
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 117/252 (46%), Gaps = 21/252 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
L+ GG H+ L G V G ND+GQLG + S P+ +SGL ++V IS G HS
Sbjct: 96 LSMGGQHSCALPAAGGVSCWGRNDYGQLGDGTMVRRS-SPVSVSGLPSDIVAISMGDGHS 154
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTG 194
A+T G + WG N GQLG G + P + T++ SG+ A G S A+T
Sbjct: 155 CALTSAGAVECWGWNQVGQLGDGTYPNRSAPGVVTRLS--SGVV--AIASGDVHSCALTS 210
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V WG+ +G+LG G T TP + L V I A G HS +
Sbjct: 211 VGAVKCWGSNVAGQLGAGTP---------TYHRTPIGVTGLRSGVVAI-AGGNQHSCALA 260
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
G V +G + ++ +G A R + ++ S VV G H+C LT G +
Sbjct: 261 TAGAVKCWGSNSHGQL--GDGTTANRATPVAVPSLSSGVVAITAGWGHSCALTKAGAVVC 318
Query: 312 WGSNENGCLGIG 323
WG N NG +G G
Sbjct: 319 WGDNSNGQIGDG 330
>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
Length = 1120
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 139/306 (45%), Gaps = 45/306 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G ++ +P + + S+ +ACG HT +T TG +Y G ++
Sbjct: 305 WGEESGGRLGHGVVKDVIQPRMVESLAASSIGFVACGEFHTCAVTITGELYTWGDGTHNA 364
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+SG + +V ++ G H++ +T G+L+ +G + G LG G
Sbjct: 365 GLLGHGSDVSHWI-PKRVSGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHG 423
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + I P +VE LSG+ T A G + AV GK+ +WG G
Sbjct: 424 DR--ENISYPKEVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKN 481
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G+V+ G
Sbjct: 482 RLGHGDKEPRL---------KPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGS--- 529
Query: 268 DKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ Q GN PS K+P EEV CG YH VLTS E+YTWG N
Sbjct: 530 -TVYGQLGN----PSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGAN 584
Query: 318 GCLGIG 323
G LG G
Sbjct: 585 GRLGHG 590
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E R +P A + +ACG + T+ LT +G V++ G +GQ
Sbjct: 475 WGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGSTVYGQ 534
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G + + V ++S G +H +T E+Y WGK +NG+LG G
Sbjct: 535 LGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGANGRLGHGDVED 594
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K A G + A+
Sbjct: 595 R--KTPTLVEALKDRHVKYIACGSNYTAAI 622
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 127/292 (43%), Gaps = 37/292 (12%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G + G LG GS S W P V E + ++ CG HT +T G ++ G
Sbjct: 357 WGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGT 416
Query: 100 FGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-----------VDGELYM 146
FG LG ENI Y E +SGL+ + ++ G H++A+ G+L+
Sbjct: 417 FGALGHGDRENISYPKEVESLSGLR--TIAVACGVWHTAAVVEVIVTQSSSSISSGKLFT 474
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG +LG G K ++ P T V L + A G +V +T G+V S G+
Sbjct: 475 WGDGDKNRLGHGDKEPRLKP--TCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGSTVY 532
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG+ S P L+++ L G V+ + G H + VY +G
Sbjct: 533 GQLGNP----------SADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKG 582
Query: 266 AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
A ++ + + P+L+ L + + + CG +T + L+ W S+
Sbjct: 583 ANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYTAAIC----LHKWVSS 630
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
PL S + ++ I+ G H++ +T GE++ WG+ S G+LG G K + P VE L
Sbjct: 274 PLE-SNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG--VVKDVIQPRMVESL 330
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLI 232
+ A G + AVT G++ +WG G +G LGHG + S + P+ +
Sbjct: 331 AASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSD---------VSHWIPKRV 381
Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
LEG++V G H+A + G+++ FGD + + + P + L
Sbjct: 382 SGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLR 441
Query: 290 SEEVVCGGYHTCVLTS-----------GGELYTWGSNENGCLGIG 323
+ V CG +HT + G+L+TWG + LG G
Sbjct: 442 TIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHG 486
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
PR ++ + + A G H+A + G V+ +G+ + ++ +P ++ L
Sbjct: 272 PRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLA 331
Query: 289 YSEE--VVCGGYHTCVLTSGGELYTW--GSNENGCLGIG 323
S V CG +HTC +T GELYTW G++ G LG G
Sbjct: 332 ASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHG 370
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H+L L+ G VYA G N+ G
Sbjct: 98 WGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCG 157
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P ++S K VV I+ G S AI +GE+Y WG N NGQLGLG
Sbjct: 158 QVG-SGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGN 216
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L G+ Q A G+ ++A+T G + SWGA G+LG G +S+ L
Sbjct: 217 NGNQL--TPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLGTGNKSNQL- 273
Query: 220 FLRSTSEYTP-RLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+P +++ E E V V+IAA H SA ++G VY++G
Sbjct: 274 --------SPGQILMEKERV-VEIAACHSAHTSAAKTQSGLVYMWG 310
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 21/271 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P + +++L+ G G H + TE G VYA G N + QLG + N
Sbjct: 53 LGTGDNQSTIVPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTN 112
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A++ DG++Y WG N+ GQ+G G A + P P
Sbjct: 113 QGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQ--PTP 170
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G SVA+ G+V WG G+G+LG G + L
Sbjct: 171 RKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQL--------- 221
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS----L 283
TP + L+GV + A G+ H+ + + G +Y +G ++ GN + + S L
Sbjct: 222 TPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQL--GTGNKSNQLSPGQIL 279
Query: 284 ISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G +Y WG
Sbjct: 280 MEKERVVEIAACHSAHTSAAKTQSGLVYMWG 310
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 112/247 (45%), Gaps = 20/247 (8%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
+++T V+ GLN LG +N ++ P ++ L K + +S G H T D
Sbjct: 34 IYITHNDEVFVFGLNCSNCLGTGDNQS-TIVPKKLESLSGKRIRSLSYGSGPHVVLSTED 92
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVL 199
GE+Y WG N QLG G V PI C + + K + A G S+A++ G V
Sbjct: 93 GEVYAWGHNGYSQLGNGTTNQGVTPIQV---CTNLLIKKVIEVACGSHHSLALSSDGDVY 149
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGR 258
+WG G++G G + ++ TPR + K+ ++ A G S I +NG
Sbjct: 150 AWGYNNCGQVGSGS---------TANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGE 200
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
VY +G ++ + P ++ L ++ CG HT LT G +Y+WG+N
Sbjct: 201 VYGWGYNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANT 260
Query: 317 NGCLGIG 323
G LG G
Sbjct: 261 YGQLGTG 267
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + + +ACG AHTL LT+ G +Y+ G N +GQ
Sbjct: 204 WGYNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQ 263
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P +I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 264 LG-TGNKSNQLSPGQILMEKERVVEIAACHSAHTSAAKTQSGLVYMWGQ-CRGQ------ 315
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 316 -SVVLPHVTHFSCTDDVF 332
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + IT + E++++G N + LG G + + +P K+E
Sbjct: 12 LSPQEIATIRKACV-FGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 68
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
LSG + + G V + T G+V +WG G +LG+G + + ++ T L
Sbjct: 69 SLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVC---TNLL 125
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-------LI 284
IK KV A G HS + +G VY +G ++ G+ A +P+ L
Sbjct: 126 IK-----KVIEVACGSHHSLALSSDGDVYAWGYNNCGQV--GSGSTANQPTPRKVSNCLQ 178
Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+K+ S + CG + + GE+Y WG N NG LG+G
Sbjct: 179 TKIVVS--IACGQTSSVAIVDNGEVYGWGYNGNGQLGLG 215
>gi|418744828|ref|ZP_13301174.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
santarosai str. CBC379]
gi|418755747|ref|ZP_13311943.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
santarosai str. MOR084]
gi|409963952|gb|EKO31852.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
santarosai str. MOR084]
gi|410794314|gb|EKR92223.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
santarosai str. CBC379]
Length = 506
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 138/297 (46%), Gaps = 31/297 (10%)
Query: 43 WGNGDYGRLGLGSLE--------SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WGN G+LG+G+ R P + + + A G H L L G + +
Sbjct: 204 WGNNAKGQLGIGNNNNPNPKEAGDRLPPTLVPGIDDAVMGAY--GFNHALILKSDGTLVS 261
Query: 95 TGLNDFGQLGISE-NI---GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
G N+ GQLG E N+ +S P+ + L+ +V+Q+ G HS+A+T +GE+Y+WGKN
Sbjct: 262 FGQNNVGQLGNGEVNLDANSFSTNPVAVVNLR-DVIQVIAGSEHSAALTENGEVYVWGKN 320
Query: 151 SNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G LG G+ +A V P KVE LSGI KQ A G + +A+ GK+ SWG SG+
Sbjct: 321 QYGNLGNGRLSAANTVQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNASGQ 378
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAV 267
LG G GF TP + L AG S I ++G V +G +
Sbjct: 379 LGIGGS----GFPNP----TPIPTQVLNITNASSVWAGGTQSFSILKSGEVKGWGANGNT 430
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N ++ + E V+ CG H L GE+Y WG N G LG
Sbjct: 431 ANLAIGETNTSKVYEPNKAVVGIENVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 22/260 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHH 134
L+ G AH+ FL + G VY G N+FGQLG + G + + + + +++ I ++
Sbjct: 133 LSAGAAHSGFL-KNGNVYTVGRNNFGQLGTGHSTGDNNNDVIVLLDSIRDIFSIHFNQNN 191
Query: 135 SSAITVDGELYMWGKNSNGQLGLG-------KKAAKVIPIPTKVECLSGIFTKQAALGFE 187
S AI +G +Y WG N+ GQLG+G K+A +P PT V + A GF
Sbjct: 192 SMAIAKNGSVYTWGNNAKGQLGIGNNNNPNPKEAGDRLP-PTLVPGIDDAV--MGAYGFN 248
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
++ + G ++S+G G+LG+G+ + ++ P + L V I AG
Sbjct: 249 HALILKSDGTLVSFGQNNVGQLGNGE----VNLDANSFSTNPVAVVNLRDVIQVI--AGS 302
Query: 248 LHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
HSA + ENG VY++G + L P + L +++ G H L
Sbjct: 303 EHSAALTENGEVYVWGKNQYGNLGNGRLSAANTVQSTPVKVEGLSGIKQIANGRDHILAL 362
Query: 304 TSGGELYTWGSNENGCLGIG 323
S G++Y+WG N +G LGIG
Sbjct: 363 ASDGKIYSWGLNASGQLGIG 382
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKV 171
+KE+ ++S G HS + +G +Y G+N+ GQLG G VI + +
Sbjct: 121 FQKEINFYFGTKLSAGAAHSGFLK-NGNVYTVGRNNFGQLGTGHSTGDNNNDVIVLLDSI 179
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ I Q S+A+ G V +WG G+LG G ++ + P L
Sbjct: 180 RDIFSIHFNQ-----NNSMAIAKNGSVYTWGNNAKGQLGIGNNNNPNP-KEAGDRLPPTL 233
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-----HARRPSLISK 286
+ ++ + A GF H+ + +G + FG V ++ E N + P +
Sbjct: 234 VPGID--DAVMGAYGFNHALILKSDGTLVSFGQNNVGQLGNGEVNLDANSFSTNPVAVVN 291
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 292 LRDVIQVIAGSEHSAALTENGEVYVWGKNQYGNLGNG 328
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 316 VWGKNQYGNLGNGRLSAANTVQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI + + P+ L + G S +I GE+ WG N N L
Sbjct: 374 NASGQLGIGGSGFPNPTPIPTQVLNITNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 AIGETNTSKVYEPNK--AVVGIENVIHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 7/258 (2%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGL--KKEV 125
EK ++K ++CG H ++E+G ++ G N GQLG +IG P R+ K +
Sbjct: 1217 EKRAIK-VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPI 1275
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ + G HS + D +Y WG++ GQLG G K+ P +E +SG + A G
Sbjct: 1276 IMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQ-NRPKIIEDISGQKIQAIAAG 1334
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G++ S+G G G+LGHG S + + + E + + G K+ A
Sbjct: 1335 FAHTIVLKKSGELYSFGYGDQGQLGHG--SFVSKSIPTRIELNTIVGIQHGGGKITQIAC 1392
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
GF HS +NG VY +G ++ RP LI L ++ CG ++T T
Sbjct: 1393 GFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKISCGHFYTMATTD 1452
Query: 306 GGELYTWGSNENGCLGIG 323
+Y+WG E+ LG G
Sbjct: 1453 LKNVYSWGLGEHMKLGHG 1470
Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 91/284 (32%), Positives = 130/284 (45%), Gaps = 34/284 (11%)
Query: 43 WGNGDYGRLG----LGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGL 97
WG G+LG +G +++ P F K + + CGG H++ + VY+ G
Sbjct: 1242 WGKNQSGQLGHGLDIGKIQTT--PKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQ 1299
Query: 98 NDFGQLG-----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ FGQLG +S+N +E ISG K + I+ G+ H+ + GELY +G
Sbjct: 1300 DKFGQLGHGTKSVSQNRPKIIED--ISGQK--IQAIAAGFAHTIVLKKSGELYSFGYGDQ 1355
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGI-----FTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
GQLG G +K IP ++ + GI Q A GF SV + G+V SWG G G
Sbjct: 1356 GQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQG 1415
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LGHG SI PRLI+ L+GV KI+ F A D VY +G
Sbjct: 1416 QLGHGNYESIA---------RPRLIEALKGV-TKISCGHFYTMATTDLK-NVYSWGLGEH 1464
Query: 268 DKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGEL 309
K+ + P ++ ++VCG HT LT G+L
Sbjct: 1465 MKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDL 1508
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/227 (22%), Positives = 89/227 (39%), Gaps = 58/227 (25%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG G+ ES RP + A + + ++CG +T+ T+ VY+ GL + +
Sbjct: 1409 WGLGKQGQLGHGNYESIARPRLIEALK--GVTKISCGHFYTMATTDLKNVYSWGLGEHMK 1466
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL------------------ 144
LG + + + ++K V +I G +H+ +T G+L
Sbjct: 1467 LGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFIDLA 1526
Query: 145 -----------------------------------YMWGKNSNGQLGLGKKAAKVI---P 166
Y G +G+LGLG P
Sbjct: 1527 PSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDLKSPFFDKP 1586
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
IPT ++ ++ + + G + + +T G + WG G G++G+G+
Sbjct: 1587 IPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIGNGK 1633
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 58/183 (31%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL----- 97
WG G++ +LG GS ++ P V F + ++ + CG HT+ LT G + L
Sbjct: 1459 WGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDD 1518
Query: 98 -NDF-------------------------GQLGISEN------------------IGYSL 113
NDF G+LG++EN +G L
Sbjct: 1519 VNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGDL 1578
Query: 114 E--------PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
+ P I G+ ++ IS G ++ IT +G LY+WG + GQ+G GK
Sbjct: 1579 KSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAW 1638
Query: 165 IPI 167
+PI
Sbjct: 1639 VPI 1641
>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
harrisii]
Length = 531
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 127/270 (47%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTIVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+V++++ G HHS A+ DGE+Y WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ ++ P+ ++
Sbjct: 223 -TPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLSPAQIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L + Q G+ ++A+T G + +WGA G+LG G +S++L
Sbjct: 218 NGNQL--TPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAQIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P +I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEAIYVTHSDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G VY +G ++ + P ++ + +
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ D G+LG + E P V ++ +ACG H+L LT G +Y+ G N +G
Sbjct: 119 WGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG 178
Query: 102 QLGIS--ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG++ ++ + PLR++ L + I+ G +HS I+ G ++ WG+N+ GQLGL
Sbjct: 179 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 238
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + PT+++ L + + A G E SV +T G V + GAG G+LGHG
Sbjct: 239 DETNR--SYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG------ 290
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
S++E PR++ EL G + A G H+ A + GRVY FG
Sbjct: 291 ---FSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFG 333
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 136/288 (47%), Gaps = 14/288 (4%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYS-LEP-LRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG + P L I L+ V +QI G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGH 129
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
+++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 130 ATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL 188
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 189 ------THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 242
Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 243 RSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 290
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHG---QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
+ +LGH + + FL LI EL+ + G HS + + G+V
Sbjct: 66 SNDYSQLGHDLPTKRPRMSPFL---------LIPELQDYVIIQICCGSRHSLALSDWGQV 116
Query: 260 YIFGD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+GD A DK + Q R+ L++K ++ CG H+ LTS GELY+W
Sbjct: 117 LSWGDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSW 172
Query: 313 GSNENGCLGIG 323
GSN G LG+
Sbjct: 173 GSNIYGQLGVN 183
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S L P+ + L A+ACGG H+ ++++G V+ G N+
Sbjct: 172 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 231
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+++ S P ++ L+ V+ ++ G S +T +G ++ G + GQLG G
Sbjct: 232 CGQLGLNDETNRSY-PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 290
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+ +++P V L G Q A G ++A V G+V ++G G SG+LG S+
Sbjct: 291 FSSNEMLP--RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSL 348
Query: 218 L 218
+
Sbjct: 349 M 349
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 227 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 286
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 287 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 346
Query: 162 AKVIP 166
+ ++P
Sbjct: 347 SLMLP 351
>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
Length = 791
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 165/335 (49%), Gaps = 30/335 (8%)
Query: 2 LGRSLTA---MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLES 58
+GRS A + +++++D L G + R F ++G+ D+G+LGLG
Sbjct: 18 IGRSRFADNVASHFFIRRDPVLSITCGDEHSAVICQTGRLF--VFGSNDWGQLGLGHKNH 75
Query: 59 RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLE-P 115
+P A + + +ACG AHTL T + ++A G + GQL GIS IG S+ P
Sbjct: 76 ISKPSCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRGISA-IGDSVNTP 134
Query: 116 LRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ + SGL ++VQI+ G HHS A+T DG ++ WG N GQLGL + ++ PTKV
Sbjct: 135 VLVYDSGLSGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGL-PDVSGLVNKPTKVH 193
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
+ KQ + G+ S +T G V G SG+LG I +++ P+ +
Sbjct: 194 IPEPV--KQISAGYYHSTFLTESGLVYVCGESESGKLG------IDASF--STQVAPKQM 243
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE 291
+L V +A G H+ + ENG +Y G + ++ L + P L+ +
Sbjct: 244 -QLPSPAVHVACGGH-HTVILAENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRN 301
Query: 292 EVV----CGGYHTCVLTSGGELYTWGSNENGCLGI 322
E + CG HT V+T G+LYT G +G LG+
Sbjct: 302 ETITRISCGESHTAVVTESGKLYTCGDGRHGKLGL 336
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 18/273 (6%)
Query: 58 SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
SR+ V S F + + ++ CG H+ + +TG ++ G ND+GQLG+ S +P
Sbjct: 21 SRFADNVASHFFIRRDPVLSITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHKNHIS-KP 79
Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
+ LK E V ++ G H+ T +++ G + GQLG G A + P+
Sbjct: 80 SCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRGISAIGDSVNTPVLVYD 139
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
LSG Q A G S+A+T G V +WG+ G+LG S ++ + T + P
Sbjct: 140 SGLSGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVN--KPTKVHIPEP 197
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
+K++ +AG+ HS + E+G VY+ G+ K+ + +LP
Sbjct: 198 VKQI--------SAGYYHSTFLTESGLVYVCGESESGKLGIDASFSTQVAPKQMQLPSPA 249
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V CGG+HT +L G LY GSN +G LG+G
Sbjct: 250 VHVACGGHHTVILAENGNLYCTGSNSSGQLGLG 282
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ D G+LG + E P V ++ +ACG H+L LT G +Y+ G N +G
Sbjct: 114 WGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 102 QLGIS--ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG++ ++ + PLR++ L + I+ G +HS I+ G ++ WG+N+ GQLGL
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + PT+++ L + + A G E SV +T G V + GAG G+LGHG
Sbjct: 234 DETNR--SYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG------ 285
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
S++E PR++ EL G + A G H+ A + GRVY FG
Sbjct: 286 ---FSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFG 328
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 136/286 (47%), Gaps = 15/286 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ V +QI G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 D-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 89/188 (47%), Gaps = 22/188 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114
Query: 263 GD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A DK + Q R+ L++K ++ CG H+ LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSWGSN 170
Query: 316 ENGCLGIG 323
G LG+
Sbjct: 171 IYGQLGVN 178
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S L P+ + L A+ACGG H+ ++++G V+ G N+
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+++ S P ++ L+ V+ ++ G S +T +G ++ G + GQLG G
Sbjct: 227 CGQLGLNDETNRSY-PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+ +++P V L G Q A G ++A V G+V ++G G SG+LG S+
Sbjct: 286 FSSNEMLP--RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSL 343
Query: 218 L 218
+
Sbjct: 344 M 344
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ D G+LG + E P V ++ +ACG H+L LT G +Y+ G N +G
Sbjct: 114 WGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 102 QLGIS--ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG++ ++ + PLR++ L + I+ G +HS I+ G ++ WG+N+ GQLGL
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + PT+++ L + + A G E SV +T G V + GAG G+LGHG
Sbjct: 234 DETNR--SYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG------ 285
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
S++E PR++ EL G + A G H+ A + GRVY FG
Sbjct: 286 ---FSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFG 328
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 136/286 (47%), Gaps = 15/286 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ V +QI G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 D-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 89/188 (47%), Gaps = 22/188 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114
Query: 263 GD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A DK + Q R+ L++K ++ CG H+ LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSWGSN 170
Query: 316 ENGCLGIG 323
G LG+
Sbjct: 171 IYGQLGVN 178
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S L P+ + L A+ACGG H+ ++++G V+ G N+
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG+++ S P ++ L+ V+ ++ G S +T +G ++ G + GQLG G
Sbjct: 227 CGQLGLNDETNRSY-PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+ +++P V L G Q A G ++A V G+V ++G G SG+LG S+
Sbjct: 286 FSSNEMLP--RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSL 343
Query: 218 L 218
+
Sbjct: 344 M 344
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
>gi|422004219|ref|ZP_16351440.1| RCC1 domain-containing protein [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417257019|gb|EKT86426.1| RCC1 domain-containing protein [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 477
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 137/297 (46%), Gaps = 31/297 (10%)
Query: 43 WGNGDYGRLGLGSLE--------SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WGN G+LG+G+ R P + + + A G H L L G + +
Sbjct: 175 WGNNAKGQLGIGNNNNPNPKEAGDRLPPTLVPGIDDAVMGAY--GFNHALILKSDGTLVS 232
Query: 95 TGLNDFGQLGISE---NIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
G N+ GQLG E N+ +S P + L+ +V+Q+ G HS+A+T +GE+Y+WGKN
Sbjct: 233 FGQNNVGQLGNGEVNLNVNSFSTNPAAVVNLR-DVIQVIAGSEHSAALTENGEVYVWGKN 291
Query: 151 SNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
G LG G+ +A V P KVE LSGI KQ A G + +A+ GK+ SWG SG+
Sbjct: 292 QYGNLGNGRLSAANTVQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNASGQ 349
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAV 267
LG G GF TP + L AG S I ++G V +G +
Sbjct: 350 LGIGGS----GFPNP----TPIPTQVLNITNASSVWAGGTQSFSILKSGEVKGWGANGNT 401
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N ++ + E V+ CG H L GE+Y WG N G LG
Sbjct: 402 ANLAIGETNTSKVYEPNKAVVGIENVIHFGCGATHNFALLRNGEIYGWGWNFKGSLG 458
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 22/260 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHH 134
L+ G AH+ FL + G VY G N+FGQLG + G + + + + +++ I ++
Sbjct: 104 LSAGAAHSGFL-KNGNVYTVGRNNFGQLGTGHSTGDNNNDVIVLLDSIRDIFSIHFNQNN 162
Query: 135 SSAITVDGELYMWGKNSNGQLGLG-------KKAAKVIPIPTKVECLSGIFTKQAALGFE 187
S AI +G +Y WG N+ GQLG+G K+A +P PT V + A GF
Sbjct: 163 SMAIAKNGSVYTWGNNAKGQLGIGNNNNPNPKEAGDRLP-PTLVPGIDDAV--MGAYGFN 219
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
++ + G ++S+G G+LG+G+ + ++ P + L V I AG
Sbjct: 220 HALILKSDGTLVSFGQNNVGQLGNGE----VNLNVNSFSTNPAAVVNLRDVIQVI--AGS 273
Query: 248 LHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
HSA + ENG VY++G + L P + L +++ G H L
Sbjct: 274 EHSAALTENGEVYVWGKNQYGNLGNGRLSAANTVQSTPVKVEGLSGIKQIANGRDHILAL 333
Query: 304 TSGGELYTWGSNENGCLGIG 323
S G++Y+WG N +G LGIG
Sbjct: 334 ASDGKIYSWGLNASGQLGIG 353
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKV 171
+KE+ ++S G HS + +G +Y G+N+ GQLG G VI + +
Sbjct: 92 FQKEINFYFGTKLSAGAAHSGFLK-NGNVYTVGRNNFGQLGTGHSTGDNNNDVIVLLDSI 150
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ I Q S+A+ G V +WG G+LG G ++ + P L
Sbjct: 151 RDIFSIHFNQ-----NNSMAIAKNGSVYTWGNNAKGQLGIGNNNNPNP-KEAGDRLPPTL 204
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-----HARRPSLISK 286
+ ++ + A GF H+ + +G + FG V ++ E N + P+ +
Sbjct: 205 VPGID--DAVMGAYGFNHALILKSDGTLVSFGQNNVGQLGNGEVNLNVNSFSTNPAAVVN 262
Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 263 LRDVIQVIAGSEHSAALTENGEVYVWGKNQYGNLGNG 299
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 72/176 (40%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L + + PV +K +A G H L L G +Y+ GL
Sbjct: 287 VWGKNQYGNLGNGRLSAANTVQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 344
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI + + P+ L + G S +I GE+ WG N N L
Sbjct: 345 NASGQLGIGGSGFPNPTPIPTQVLNITNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 404
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + P K + GI G + A+ G++ WG G LG
Sbjct: 405 AIGETNTSKVYEPNK--AVVGIENVIHFGCGATHNFALLRNGEIYGWGWNFKGSLG 458
>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
niloticus]
Length = 531
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV+ SA + +ACG H++ LT+TG VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K V I G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+V P ++ L G+ +Q G+ S+A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQV--TPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E + V+IAA H SA ++G+VY++G
Sbjct: 276 PV--------QILTEKERI-VEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 22/242 (9%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSA 137
G H L TE G ++A G N + QLG + + P+ +S L K+V +++ G HHS A
Sbjct: 84 GPHILLATEDGELFAWGHNGYSQLG-NGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMA 142
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGG 196
+T GE+Y WG N+ GQ+G G A + P P +V CL G S+AV G
Sbjct: 143 LTDTGEVYAWGYNNCGQVGSGSTANQ--PTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNG 200
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V WG G+G+LG G ++ TP + L+G+ V+ +G+ HS + +
Sbjct: 201 EVYGWGYNGNGQLGLGNNG---------NQVTPCRLVGLQGLCVQQIVSGYAHSMALTDE 251
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVL-TSGGELYT 311
G +Y +G ++ GN + + S + L E +V C HT T G++Y
Sbjct: 252 GLLYAWGANTYGQL--GTGNKSNQLSPVQILTEKERIVEIAACHSTHTSAAKTQSGQVYM 309
Query: 312 WG 313
WG
Sbjct: 310 WG 311
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 113/245 (46%), Gaps = 16/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
+++T V+ GLN LG +++ ++ P ++ L ++VV +S G H T D
Sbjct: 35 IYITNDDEVFVFGLNCSNCLGTGDSLS-TIVPKKLDFLSGRKVVSLSYGSGPHILLATED 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GEL+ WG N QLG G V P+ L+ T + A G S+A+T G+V +W
Sbjct: 94 GELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVT-EVACGSHHSMALTDTGEVYAW 152
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVY 260
G G++G G + ++ TPR + KV ++ G S + +NG VY
Sbjct: 153 GYNNCGQVGSGS---------TANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVY 203
Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENG 318
+G ++ L GN L+ + + GY H+ LT G LY WG+N G
Sbjct: 204 GWGYNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYG 263
Query: 319 CLGIG 323
LG G
Sbjct: 264 QLGTG 268
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P + ++ + G AH++ LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P++I K+ +V+I+ + H S+A T G++YMWG+ GQ
Sbjct: 265 LG-TGNKSNQLSPVQILTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 317 -SIVLPHLTHFACTDDVF 333
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 29/220 (13%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
P ++ ++K V + + + IT D E++++G N + LG G + ++P K++ L
Sbjct: 15 PQELASIRKACV-FGSSANEAIYITNDDEVFVFGLNCSNCLGTGDSLSTIVP--KKLDFL 71
Query: 175 SGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
SG K +L + + T G++ +WG G +LG+G + P L
Sbjct: 72 SG--RKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNG---------TTNQGVAPVL 120
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-------L 283
+ L KV A G HS + + G VY +G ++ G+ A +P+ L
Sbjct: 121 VSANLLNKKVTEVACGSHHSMALTDTGEVYAWGYNNCGQV--GSGSTANQPTPRRVSSCL 178
Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+K+ S +VCG + + GE+Y WG N NG LG+G
Sbjct: 179 QNKVAVS--IVCGQTSSLAVVDNGEVYGWGYNGNGQLGLG 216
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3206 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3265
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 3266 LGHGDN-STQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3324
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3325 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3380
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3381 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3431
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3432 NKKPALVIGLDAVFVNRVACGSSHS 3456
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 131/287 (45%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3153 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3212
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 3213 KLGHGNRTTLD-KPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3271
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ ++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3272 STQLKP--KLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3324
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3325 ----SEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3380
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P I+ L V G H +T G++Y WG N++G G G
Sbjct: 3381 RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3427
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + ++ +ACG AH+ +T +G V G +G+
Sbjct: 4347 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 4406
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + I D ++ WG G+LG G
Sbjct: 4407 LGHGDSED-QLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRG- 4464
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4465 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4521
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH ++G VY +GD ++ +
Sbjct: 4522 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4574
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4575 RPRLVAALQGKHIVKVTCGSAHTLALST 4602
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4241 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4298
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4299 GRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4357
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4358 GNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4411
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI+++ V+ +GD K+
Sbjct: 4412 -----SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKL----- 4461
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S KLPY E V CG + LT G +YTWG + LG G
Sbjct: 4462 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4516
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4327 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMN--VADIACGS 4384
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4385 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--QLVEALLGYRAIDIACGSGDAQTL 4442
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+ V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4443 CINDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4493
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4494 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4553
Query: 309 LYTWGSNENGCLGIG 323
+YTWG N+ G LG G
Sbjct: 4554 VYTWGDNDEGQLGDG 4568
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 124/253 (49%), Gaps = 20/253 (7%)
Query: 79 GGAHTLFLT-ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ + G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 3135 GGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3193
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 3194 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVETLRSKKIRDVACGSSHSAAISS 3251
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG S+ L P+L+ L G +V A G +
Sbjct: 3252 QGELYTWGLGEYGRLGHGDNSTQL---------KPKLVAALAGRRVIQVACGSRDAQTLA 3302
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 3303 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3362
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3363 TWGKGDYYRLGHG 3375
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + + P V A +H + AL G AH+L LT G VYA G D+
Sbjct: 695 WGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADY 754
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N+ S+ P+ + L K V ++ G S A+T DG+LY WGK S L ++
Sbjct: 755 GKLG-NGNLNGSMSPVLVESLPK-VQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVER 812
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+A+ +P + L A+G +A++ G+V WG S ++
Sbjct: 813 SAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQI 861
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 111/262 (42%), Gaps = 40/262 (15%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
K ++ + C + L L+E G +Y + EP + + E + +S
Sbjct: 575 KFQVQQIVCSESIVLILSEDGKLYNWRM-----------FKPETEPQLLEEIAHETI-VS 622
Query: 130 TGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQ 181
H H AI ++ Y WG + +LG G A+ +P TK+ C+ +F
Sbjct: 623 IASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVP--TKITLLDRCVKAVFC-- 678
Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
G S A+T G + +WG G RLGHG S + P ++ L ++
Sbjct: 679 ---GCSYSAAITCSGNLYTWGRGTYARLGHGN---------SDDQPLPTVVMALTEHEII 726
Query: 242 IAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
A +G HS C+ G VY +GD K+ N + P L+ LP + V G
Sbjct: 727 DVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQRVFAGAQF 786
Query: 300 TCVLTSGGELYTWGSNENGCLG 321
+ LT+ G+LY+WG + CLG
Sbjct: 787 SMALTTDGQLYSWG--KASCLG 806
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 20/246 (8%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
C G H + + Y+ G + +LG + ++ P +I+ L + V + G +S+A
Sbjct: 627 CEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAV-PTKITLLDRCVKAVFCGCSYSAA 685
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
IT G LY WG+ + +LG G + P+PT V L+ ALG S+ +T
Sbjct: 686 ITCSGNLYTWGRGTYARLGHGNSDDQ--PLPTVVMALTEHEIIDVALGSGDAHSLCLTSE 743
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG+G + + +P L++ L V+ A A F S +
Sbjct: 744 GHVYAWGDADYGKLGNGNLNGSM---------SPVLVESLPKVQRVFAGAQF--SMALTT 792
Query: 256 NGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G++Y +G + +++ + P LIS L + +V G H L+S GE++
Sbjct: 793 DGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFG 852
Query: 312 WGSNEN 317
WG N++
Sbjct: 853 WGRNDS 858
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 18/230 (7%)
Query: 38 RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
R A WGNG+ RLG G +R P + ++ +KA+ CG +++ +T +G +Y G
Sbjct: 639 RNAYSWGNGEDHRLGHGDTHARAVPTKITLLDR-CVKAVFCGCSYSAAITCSGNLYTWGR 697
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
+ +LG + L + ++ + E++ ++ +G HS +T +G +Y WG G+L
Sbjct: 698 GTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKL 757
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P+ VE L + ++ G + S+A+T G++ SWG LGH
Sbjct: 758 GNGNLNGSMSPV--LVESLPKV--QRVFAGAQFSMALTTDGQLYSWGKASC--LGH---- 807
Query: 216 SILGFLRSTSEY--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ ++++ PRLI L+ ++ A G H + G V+ +G
Sbjct: 808 ---QLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWG 854
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 134 HSSAITVDGEL----YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
H A +D +L +WG N QLG G K +KV +PT + +S + A G +
Sbjct: 3083 HGMAGALDQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSL 3140
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
V GKV + G G +GRLG G ++ P + L VK A +G
Sbjct: 3141 FIVGQNGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGG 3191
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTS 305
H+ + +G+V+ +G+ K+ +P L+ L + +V CG H+ ++S
Sbjct: 3192 KHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISS 3251
Query: 306 GGELYTWGSNENGCLGIG 323
GELYTWG E G LG G
Sbjct: 3252 QGELYTWGLGEYGRLGHG 3269
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 88/238 (36%), Gaps = 69/238 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4238 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4295
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4296 GSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4355
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4356 GHGNRMSY---------DRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 4406
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L + ++ CG T + +++WG + G LG G
Sbjct: 4407 LGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRG 4464
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 91/247 (36%), Gaps = 40/247 (16%)
Query: 92 VYATGLNDFGQLGISENIGYSLEP----------LRISGLKKEVVQISTGYHHSSAITVD 141
VYA G + E G++ EP L + K +V QI ++ D
Sbjct: 539 VYALGWPSLSK----EQHGFNAEPALSWSSDPSSLPLLNCKFQVQQIVCSESIVLILSED 594
Query: 142 GELYMWGK-NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G+LY W + L ++ A + C F +A+ S
Sbjct: 595 GKLYNWRMFKPETEPQLLEEIAHETIVSIASHCEGRHF-----------MAIDINRNAYS 643
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G RLGHG + + P I L+ VK G +SA I +G +Y
Sbjct: 644 WGNGEDHRLGHGD---------THARAVPTKITLLDRC-VKAVFCGCSYSAAITCSGNLY 693
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNE 316
+G ++ + P+++ L E + G H+ LTS G +Y WG +
Sbjct: 694 TWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDAD 753
Query: 317 NGCLGIG 323
G LG G
Sbjct: 754 YGKLGNG 760
>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
domestica]
Length = 531
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 127/270 (47%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTIVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGMVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+++ L K+V++++ G HHS A+ DGE+Y WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ ++ P+ ++
Sbjct: 223 -TPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLSPAQIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ VC+ + +ACG H++ L G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L + Q G+ ++A+T G + +WGA G+LG G +S++L
Sbjct: 218 NGNQL--TPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAQIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P +I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEAIYVTHNDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V + T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G VY +G ++ + P ++ + +
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
Length = 1109
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 134/309 (43%), Gaps = 49/309 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG HT +T +G +Y G +
Sbjct: 334 WGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNC 393
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 394 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 452
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P +VE L G+ T +AA G + AV GK+ +WG G
Sbjct: 453 DR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 510
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--ACIDENGRVYIFGD 264
GRLGHG + + L R L VK HS + G VY G
Sbjct: 511 GRLGHGDKEAKLVPTRVA----------LVNVKPNFCQVACGHSLTVALTTKGHVYTMGS 560
Query: 265 RAVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGS 314
++ P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 561 PVYGQLGI--------PQADGKLPICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGK 612
Query: 315 NENGCLGIG 323
NG LG G
Sbjct: 613 GANGRLGHG 621
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 131/274 (47%), Gaps = 39/274 (14%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-I 128
++ +ACGG H +T+ G +++ G G+L G+ ++ L P I L ++ +
Sbjct: 311 DVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDV---LHPKLIEALSNTNIELV 367
Query: 129 STGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ G +H+ A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 368 ACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHW--VPKRVNGPLEGIHVSYISCG 425
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 426 PWHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTVRAAC 476
Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLP 288
G H+A + E +G+++ +GD DK G+ R +L++ P
Sbjct: 477 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTRVALVNVKP 534
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+V CG T LT+ G +YT GS G LGI
Sbjct: 535 NFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGI 568
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 128/299 (42%), Gaps = 35/299 (11%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WGNG Y G LG G+ S W P V E + ++CG HT +T G ++ G
Sbjct: 386 WGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGT 445
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAIT------------VDGELYM 146
FG LG + SL P + LK V+ + G H++A+ G+L+
Sbjct: 446 FGALGHGDRKSVSL-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 504
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG G+LG G K AK++P + + F Q A G +VA+T G V + G+
Sbjct: 505 WGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFC-QVACGHSLTVALTTKGHVYTMGSPVY 563
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG Q G L E+ +L V+ A G H A + VY +G A
Sbjct: 564 GQLGIPQAD---GKLPICVEW------KLSESFVEEIACGAYHVAVLTSRTEVYTWGKGA 614
Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW--GSNENGCLG 321
++ + + P+L+ L + + CG T + L+ W G +++ C G
Sbjct: 615 NGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTNFTAAIC----LHKWVSGVDQSMCSG 669
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 26/197 (13%)
Query: 142 GELYMWGKNS--------NGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
G++++WG+ + N ++G LG K + P +E + + A G +
Sbjct: 267 GDVFIWGEGTGDGVLGGGNHRVGSCLGVKMDSLFP--KSLESAVVLDVQNIACGGRHAAL 324
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
VT G++ SWG GRLGHG +S +L P+LI+ L +++ A G H+
Sbjct: 325 VTKQGEIFSWGEEAGGRLGHGVDSDVL---------HPKLIEALSNTNIELVACGEYHTC 375
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSG 306
+ +G +Y +G+ + L GN P ++ + + + CG +HT V+TS
Sbjct: 376 AVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSA 435
Query: 307 GELYTWGSNENGCLGIG 323
G+L+T+G G LG G
Sbjct: 436 GQLFTFGDGTFGALGHG 452
>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
Length = 516
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 142/286 (49%), Gaps = 25/286 (8%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRP-VVCSAFEK-HSLKALACGGAHTLFLTE 88
IS+ + FA +G G+LG+G L+ RW P ++ + EK +++ AL+ G H+ FLTE
Sbjct: 102 ISTECNKIFA--FGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTE 159
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
G VY G N GQ GI +N Y L P +I + + IS GY+H++ I++ G++Y +G
Sbjct: 160 EGSVYIWGDNSDGQCGI-KNENYLLNPRKIE-FQNPINSISCGYYHTAFISL-GKVYTFG 216
Query: 149 KNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
++ NG+LG K +P + C+S G ++ +T GK ++G+ S
Sbjct: 217 EDDNGKLGRSDKLPNDVPEGVELDENCIS------VKCGGSHTIILTESGKAYAFGSNFS 270
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG LG + R+ E V + G HSA + + G++Y GD
Sbjct: 271 GQLG-------LGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGR 323
Query: 267 VDKMLFQ-EGNHARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGEL 309
K+ + E + P+ I K + V CGG HT VL +L
Sbjct: 324 NGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLAKALKL 369
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 32/290 (11%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
L+G D+G+LG G + +P + + +ACG +HTL TE ++A G N G
Sbjct: 59 LFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDG 118
Query: 102 QLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG+ + + + + L+K ++ +S G HHS+ +T +G +Y+WG NS+GQ G+
Sbjct: 119 QLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVYIWGDNSDGQCGI-- 176
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + P K+E + I + G+ + A GKV ++G +G+LG
Sbjct: 177 KNENYLLNPRKIEFQNPI--NSISCGYYHT-AFISLGKVYTFGEDDNGKLGR-------- 225
Query: 220 FLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S+ P + EL+ + + G H+ + E+G+ Y FG ++ GN
Sbjct: 226 -----SDKLPNDVPEGVELDENCISVKCGG-SHTIILTESGKAYAFGSNFSGQLGL--GN 277
Query: 277 HARRPSLISKLPYSEE------VVCGGYHTCVLTSGGELYTWGSNENGCL 320
S+ ++ +++E V CG H+ LT G+LYT G NG L
Sbjct: 278 FETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGRNGKL 327
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 132/279 (47%), Gaps = 34/279 (12%)
Query: 57 ESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+SR+ + S F +K ++CG HT + ++G V+ G NDFGQLG + +
Sbjct: 20 KSRFAEDLSSHFFVRNDPVKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFG-HTKIVNK 78
Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKV 171
P + LK + + ++ G H+ T +++ +G NS+GQLG+G + +P I T +
Sbjct: 79 PSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDL 138
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
E + I A G S +T G V WG G+ G E+ +L PR
Sbjct: 139 EKTNNIIALSA--GCHHSAFLTEEGSVYIWGDNSDGQCGIKNENYLLN---------PRK 187
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I E + + + G+ H+A I G+VY FG+ K+ R L + +P
Sbjct: 188 I-EFQN-PINSISCGYYHTAFISL-GKVYTFGEDDNGKL-------GRSDKLPNDVPEGV 237
Query: 292 E-------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
E V CGG HT +LT G+ Y +GSN +G LG+G
Sbjct: 238 ELDENCISVKCGGSHTIILTESGKAYAFGSNFSGQLGLG 276
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 1943 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 2002
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + V+Q++ G + A+T DG ++ WG G+LG G
Sbjct: 2003 LGHGDN-ATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGG 2061
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 2062 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 2117
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 2118 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 2168
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 2169 NKKPALVIGLDAVFVNRVACGSSHS 2193
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 130/287 (45%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 1890 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 1949
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 1950 KLGHGNRTTLD-KPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 2008
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
A ++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2009 ATQLKP--KLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGG----- 2061
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 2062 ----SEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 2117
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P I L V G H +T G++Y WG N++G G G
Sbjct: 2118 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 2164
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 142/297 (47%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 2982 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 3039
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 3040 GRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 3098
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 3099 GNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 3152
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 3153 -----SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 3202
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S KLPY E V CG + LT G +YTW + LG G
Sbjct: 3203 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHG 3257
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 3068 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMN--VADIACGS 3125
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 3126 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--QLVEALLGYRAIDIACGSGDAQTL 3183
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 3184 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 3234
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY + ++ +H RRP ++ L + + G H + GE
Sbjct: 3235 VALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 3294
Query: 309 LYTWGSNENGCLGIG 323
+YTWG N+ G LG G
Sbjct: 3295 VYTWGDNDEGQLGDG 3309
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 124/253 (49%), Gaps = 20/253 (7%)
Query: 79 GGAHTLFLT-ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF+ + G VYA G G+LG+ L P ++ L + VV+ + +G H
Sbjct: 1872 GGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 1930
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 1931 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVETLRSKKIRDVACGSSHSAAISS 1988
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG ++ L P+L+ L G +V A G +
Sbjct: 1989 QGELYTWGLGEYGRLGHGDNATQL---------KPKLVAALAGRRVIQVACGSRDAQTLA 2039
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE++
Sbjct: 2040 LTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 2099
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2100 TWGKGDYYRLGHG 2112
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G YGRLG G E + RP + A + +ACG A TL +T+ V++ G D+
Sbjct: 3140 WGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDY 3199
Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G L P +I L V+++ G S A+T G +Y W K +LG G
Sbjct: 3200 GKLGRGGSDGCKL-PYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHG- 3257
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P KV L G A G VA + G+V +WG G+LG G ++I
Sbjct: 3258 -SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAI-- 3314
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
PRL+ L+G + G H+ +
Sbjct: 3315 -------QRPRLVAALQGKHIVKVTCGSAHTLAL 3341
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + CG ++ LT++G VY DF +
Sbjct: 3194 WGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHR 3253
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG ++ + P +++ L+ K+++ I+TG H A + GE+Y WG N GQLG G
Sbjct: 3254 LGHG-SVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVT 3312
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
A I P V L G + G ++A++
Sbjct: 3313 A--IQRPRLVAALQGKHIVKVTCGSAHTLALS 3342
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 134 HSSAITVDGEL----YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
H A +D +L +WG N QLG G K +KV +PT + +S + A G +
Sbjct: 1820 HGMAGALDQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSL 1877
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
V GKV + G G +GRLG G ++ P + L VK A +G
Sbjct: 1878 FIVGQNGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGG 1928
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTS 305
H+ + +G+V+ +G+ K+ +P L+ L + +V CG H+ ++S
Sbjct: 1929 KHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISS 1988
Query: 306 GGELYTWGSNENGCLGIG 323
GELYTWG E G LG G
Sbjct: 1989 QGELYTWGLGEYGRLGHG 2006
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 89/238 (37%), Gaps = 69/238 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 2979 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 3036
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 3037 GSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 3096
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 3097 GHGNRMSY---------DRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 3147
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 3148 LGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 3205
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 150/328 (45%), Gaps = 31/328 (9%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L C R ++ T ++ WG GRLG G+ RP + +
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309
Query: 73 LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
+ ++CG HT +T +G ++ G + G LG + Y L P ++SG + +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS+ T G+LY +G + G LG G + + + P +VE LSG T + A G
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426
Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ TG K+ +WG G RLGHG + L P+ ++ L
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRL---------VPKCVQALLEY 477
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVC 295
A G + + +GRV+ G + + L + ++P L+ SE E+ C
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSS-NGQLGNPKSDGKQPCLVQDRLASELVEEISC 536
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H VLTS E+YTWG NG LG G
Sbjct: 537 GASHVTVLTSRSEVYTWGMGANGRLGHG 564
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E R P A +++ LACG T+ L +G V+ G + GQ
Sbjct: 449 WGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQ 508
Query: 103 LGISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ G +P + L E+V +IS G H + +T E+Y WG +NG+LG G
Sbjct: 509 LGNPKSDGK--QPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGD- 565
Query: 161 AAKVIPIPTKVECLSGIFTKQAALG 185
K P VE L K + G
Sbjct: 566 -LKDRKKPCLVEALKDRHVKSISCG 589
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ S+G V+ IP +E + Q A G T
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG ++ I P+L++ L V + + G H+ +
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
+G ++ +GD + + L G P +S +V+ CG +H+ + TS G+LY
Sbjct: 326 SGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLY 385
Query: 311 TWGSNENGCLGIG 323
T+G G LG G
Sbjct: 386 TFGDGTFGVLGHG 398
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
WG G GRLG G L+ R +P + A + +K+++CG T
Sbjct: 553 WGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFT 593
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 129/272 (47%), Gaps = 19/272 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG L+S P + +L+ G G H + T G VYA G N + QLG +
Sbjct: 61 GCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYAWGHNGYSQLG-NG 119
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +S L K V +++ G HH+ A+T DGE+Y WG N++GQ+G G A +
Sbjct: 120 TTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ-- 177
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P P +V CL A G S+AV G++ WG +G+LG G
Sbjct: 178 PTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNG--------- 228
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+GV + A G+ H+ + + G VY +G + ++ ++ P+ I
Sbjct: 229 NQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTPI 288
Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G++ WG
Sbjct: 289 NTDKERIVEVAACHTSHTSAAKTQSGQVLMWG 320
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P +V + + +ACG HT+ LT G VYA G N+ G
Sbjct: 108 WGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSG 167
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 168 QVG-SGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGN 226
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++ L G+ Q A G+ ++A+T G V +WGA G+LG G +S
Sbjct: 227 NGNQ--QTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKS---- 280
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ P I + V++AA H SA ++G+V ++G
Sbjct: 281 -----NQALPTPINTDKERIVEVAACHTSHTSAAKTQSGQVLMWG 320
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 117/245 (47%), Gaps = 16/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITVD 141
L++T V+A G N G LG+ + + ++EP RI L K++V +S G H T D
Sbjct: 44 LYVTVNDEVFALGTNCSGCLGLGD-LQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATAD 102
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE+Y WG N QLG G + P LS T + A G ++A+T G+V +W
Sbjct: 103 GEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVT-EVACGSHHTIALTTDGEVYAW 161
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
G SG++G G + ++ TPR + KV + A G L S + +NG +Y
Sbjct: 162 GYNNSGQVGSGS---------TANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIY 212
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+G ++ + + P I+ L +V CG HT LT G +Y WG+N G
Sbjct: 213 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYG 272
Query: 319 CLGIG 323
LG G
Sbjct: 273 QLGTG 277
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +GQ
Sbjct: 214 WGYNCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG +L P I+ K+ +V+++ + H S+A T G++ MWG+
Sbjct: 274 LGTGNKSNQAL-PTPINTDKERIVEVAACHTSHTSAAKTQSGQVLMWGQ 321
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
++L P L ++ + + + +TV+ E++ G N +G LGLG + + P
Sbjct: 19 FALLPPEELRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRID 78
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
V C I + G V T G+V +WG G +LG+G + L TP
Sbjct: 79 VLCGKKIVSLSYGTG-PHVVIATADGEVYAWGHNGYSQLGNGTTNHGL---------TPA 128
Query: 231 LIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
L+ L +V A G H+ + +G VY +G ++ + P +S
Sbjct: 129 LVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQ 188
Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ VV CG + + GE+Y WG N NG LG+G
Sbjct: 189 NKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLG 225
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 133/276 (48%), Gaps = 17/276 (6%)
Query: 43 WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+GN + G LGLG +E P E ++ +A G HTL LT G V + G ND
Sbjct: 21 FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDH 80
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + + +P ++ L+ +VQ+ G HS A+T G++YMWG NS GQLG G+
Sbjct: 81 DQLGQEVS---TTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGE 137
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P V+ L+ Q A G +A+ G + +WG G+G+LG G
Sbjct: 138 GQESRLS-PRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGE--- 193
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ P + L G+ + A G HS + ++G ++++G ++ +
Sbjct: 194 -----PQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRA 248
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWG 313
P+L+ L + + + GG H+ LT+ G ++T+G
Sbjct: 249 FPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFG 284
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
V QI+TG HH+ +T G + G N + QLG K P+ T ++CL + Q
Sbjct: 53 VRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPV-TALQCLRIV---QVCC 108
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G + S+A+T G+V WG+ G+LG+G QES + +PR +K L V
Sbjct: 109 GQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRL----------SPRFVKTLAPFTVVQ 158
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGY 298
A G H + NG +Y +GD ++ + G R P ++ L P S+ + CG
Sbjct: 159 IACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQ-IACGAN 217
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
H+ VL+ G ++ WGSN G LG+
Sbjct: 218 HSMVLSKSGVIFVWGSNRFGQLGLS 242
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+G ++G+LGLG ++ +P + L GI +Q A G ++ +T G+VLS G+
Sbjct: 21 FGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDH 80
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG + S P + L+ +++ G HS + E G+VY++G +
Sbjct: 81 DQLG-----------QEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNS 129
Query: 267 VDKMLFQEGNHAR-RPSLISKL-PYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ EG +R P + L P++ ++ CG H L + G LY WG N NG LGIG
Sbjct: 130 KGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIG 189
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 21/173 (12%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ +G+LGL + R P + + +K +A GGAH+ LT G V+ G + +
Sbjct: 230 VWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYE 289
Query: 102 QLGISENIGYSL---EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
S + SL E S L +++ + ++ E S GQLG G
Sbjct: 290 ----SHEVRISLRGTESNPQSALARKLFSL-----------IEREFCRHSYGSYGQLGHG 334
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLG 210
K ++ P+ K++ L G Q ALG +V GKV ++G GG+G+LG
Sbjct: 335 SKNDQLTPM--KIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385
>gi|163847891|ref|YP_001635935.1| chromosome condensation regulator RCC1 [Chloroflexus aurantiacus
J-10-fl]
gi|222525767|ref|YP_002570238.1| chromosome condensation regulator RCC1 [Chloroflexus sp. Y-400-fl]
gi|163669180|gb|ABY35546.1| regulator of chromosome condensation RCC1 [Chloroflexus aurantiacus
J-10-fl]
gi|222449646|gb|ACM53912.1| regulator of chromosome condensation RCC1 [Chloroflexus sp.
Y-400-fl]
Length = 790
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G++ R PV E + A+A GG+HT LT G V G N GQ
Sbjct: 91 WGDNSSGQLGDGTMNDRNTPVDVVGLES-GVAAIAAGGSHTCALTTNGGVKCWGANVSGQ 149
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I YS P+ + L + V I+ G+ H+ A+T G + WG NS+GQLG G
Sbjct: 150 LGNETQIPYS-APVDVVELGRGVFDITAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTND 208
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ ++G+ + AA+ G + A+T G V WG G+LG G
Sbjct: 209 RNTPVD-----VAGLESGVAAIAAGEGHTCALTTSGGVKCWGDNLEGQLGGGTIY----- 258
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
S TP + LE V A G+ H+ + G V +G+ + ++ +G R
Sbjct: 259 ----SHITPVDVAGLES-DVAAIAVGWEHTCALTTVGGVRCWGNNSSGQL--GDGTMTER 311
Query: 281 PSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + + GG HTC LT+GG + WG+N G LG
Sbjct: 312 NVPVGVIGLESGVTAITAGGGHTCALTTGGGVKCWGNNFYGQLG 355
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 24/286 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R PV + E + A+A G HT LT +G V G N GQ
Sbjct: 193 WGDNSSGQLGDGTTNDRNTPVDVAGLES-GVAAIAAGEGHTCALTTSGGVKCWGDNLEGQ 251
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG I + P+ ++GL+ +V I+ G+ H+ A+T G + WG NS+GQLG G
Sbjct: 252 LG-GGTIYSHITPVDVAGLESDVAAIAVGWEHTCALTTVGGVRCWGNNSSGQLGDGTMTE 310
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ + SG+ A G + A+T GG V WG G+LG+
Sbjct: 311 RNVPVGV-IGLESGVTAITAGGG--HTCALTTGGGVKCWGNNFYGQLGN----------- 356
Query: 223 STSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ + P + ++ G+ + + AAG H+ + +G V +G + +G R
Sbjct: 357 -VTAHQPGIPVDVAGLGIGVVAIAAGGAHTCALTTSGGVKCWGYNY--DVQLGDGTTTAR 413
Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + +VV GG HTC LT+ G + WG N N LG G
Sbjct: 414 STPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWGRNFNFQLGDG 459
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 134/284 (47%), Gaps = 24/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN YG+LG + PV + + A+A GGAHT LT +G V G N Q
Sbjct: 346 WGNNFYGQLGNVTAHQPGIPVDVAGLGI-GVVAIAAGGAHTCALTTSGGVKCWGYNYDVQ 404
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ +SGL+ +VV I+ G H+ A+T G + WG+N N QLG G
Sbjct: 405 LGDGTTTARS-TPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWGRNFNFQLGDGTMID 463
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P+ + G+ ++ A+ G + A+T V WG+ G+LGHG + F
Sbjct: 464 RNTPVD-----VIGLGSRVTAITAGGNHTCALTTSDGVKCWGSNLYGQLGHGT----MNF 514
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
TP + L G V AAG+ H+ + +G V +G A D +G + R
Sbjct: 515 YG-----TPVDVIGLNG-DVTAIAAGWWHTCALMTDGGVKCWG--ANDSGQLGDGTRSDR 566
Query: 281 --PSLISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLG 321
P +S L + G +HTC LT+ G + WGSN + LG
Sbjct: 567 SIPVDVSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLG 610
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 128/286 (44%), Gaps = 23/286 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +LG G++ R PV + A+ GG HT LT + V G N +GQ
Sbjct: 448 WGRNFNFQLGDGTMIDRNTPVDVIGLGSR-VTAITAGGNHTCALTTSDGVKCWGSNLYGQ 506
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + P+ + GL +V I+ G+ H+ A+ DG + WG N +GQLG G ++
Sbjct: 507 LG-HGTMNFYGTPVDVIGLNGDVTAIAAGWWHTCALMTDGGVKCWGANDSGQLGDGTRSD 565
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ IP+ +SG+ + AA+ G + A+T G V WG+ S +LG+
Sbjct: 566 RSIPVD-----VSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGN--------- 611
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG--RVYIFGDRAVDKMLFQEGNHA 278
+ Y P + L I A LH C G +V +G ++ N
Sbjct: 612 ITVGQPYIPVDVFGLWSGVTAITAG--LHHTCALTTGSAQVQCWGGNYDGQLGDGTTNLR 669
Query: 279 RRPSLISKLPYSEE-VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R P + L SE + GG HTC LT G + WG N G LG G
Sbjct: 670 RFPQTVIGLEGSETAIAAGGAHTCALTVSGGMKCWGDNFYGQLGDG 715
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 21/285 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG G++ PV + A+A G HT L G V G ND GQ
Sbjct: 499 WGSNLYGQLGHGTMNFYGTPVDVIGLNG-DVTAIAAGWWHTCALMTDGGVKCWGANDSGQ 557
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S+ P+ +SGL V I+ G H+ A+T G + WG NS+ QLG
Sbjct: 558 LGDGTRSDRSI-PVDVSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGNITVGQ 616
Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSILG 219
IP+ + G+++ A+ G + A+T G +V WG G+LG G +
Sbjct: 617 PYIPVD-----VFGLWSGVTAITAGLHHTCALTTGSAQVQCWGGNYDGQLGDGTTN---- 667
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
LR P+ + LEG + IAA G H+ + +G + +GD ++ +
Sbjct: 668 -LRRF----PQTVIGLEGSETAIAAGG-AHTCALTVSGGMKCWGDNFYGQLGDGSMHDRS 721
Query: 280 RPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
P + +L + + + G+ HTC LT+ + WG N LG G
Sbjct: 722 TPVDVIRLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDG 766
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 117/253 (46%), Gaps = 15/253 (5%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++ A+A G HT LT G V G N GQLG + P+ + GL+ V I+ G
Sbjct: 68 NITAIATGRYHTCALTTGGGVKCWGDNSSGQLG-DGTMNDRNTPVDVVGLESGVAAIAAG 126
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H+ A+T +G + WG N +GQLG + P+ VE G+F A G+E + A
Sbjct: 127 GSHTCALTTNGGVKCWGANVSGQLGNETQIPYSAPVDV-VELGRGVFDITA--GWEHTCA 183
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+T GG V WG SG+LG G + TP + LE V AAG H+
Sbjct: 184 LTTGGGVKCWGDNSSGQLGDGT---------TNDRNTPVDVAGLES-GVAAIAAGEGHTC 233
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELY 310
+ +G V +GD ++ P ++ L + G+ HTC LT+ G +
Sbjct: 234 ALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAGLESDVAAIAVGWEHTCALTTVGGVR 293
Query: 311 TWGSNENGCLGIG 323
WG+N +G LG G
Sbjct: 294 CWGNNSSGQLGDG 306
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
+ + I+TG +H+ A+T G + WG NS+GQLG G + P+ V SG+
Sbjct: 67 RNITAIATGRYHTCALTTGGGVKCWGDNSSGQLGDGTMNDRNTPVDV-VGLESGV--AAI 123
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G + A+T G V WGA SG+LG+ E+ I P + EL G V
Sbjct: 124 AAGGSHTCALTTNGGVKCWGANVSGQLGN--ETQI-------PYSAPVDVVEL-GRGVFD 173
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTC 301
AG+ H+ + G V +GD + ++ N P ++ L + G HTC
Sbjct: 174 ITAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLESGVAAIAAGEGHTC 233
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LT+ G + WG N G LG G
Sbjct: 234 ALTTSGGVKCWGDNLEGQLGGG 255
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ R P E S A+A GGAHT LT +G + G N +GQ
Sbjct: 653 WGGNYDGQLGDGTTNLRRFPQTVIGLEG-SETAIAAGGAHTCALTVSGGMKCWGDNFYGQ 711
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ + L+ V I+ G+ H+ A+T D + WG N QLG G+
Sbjct: 712 LGDGSMHDRS-TPVDVIRLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDGRPLW 770
Query: 163 KVIPI 167
+ +P+
Sbjct: 771 RSVPV 775
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 79/224 (35%), Gaps = 57/224 (25%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+ R PV S + A+ G HT LT +G V G N Q
Sbjct: 550 WGANDSGQLGDGTRSDRSIPVDVSGLGS-GVAAITAGLFHTCALTTSGGVKCWGSNSSWQ 608
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT----------------------- 139
LG + +G P+ + GL V I+ G HH+ A+T
Sbjct: 609 LG-NITVGQPYIPVDVFGLWSGVTAITAGLHHTCALTTGSAQVQCWGGNYDGQLGDGTTN 667
Query: 140 -----------------------------VDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
V G + WG N GQLG G + P+
Sbjct: 668 LRRFPQTVIGLEGSETAIAAGGAHTCALTVSGGMKCWGDNFYGQLGDGSMHDRSTPVDV- 726
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+ S + A GF + A+T V WG +LG G+
Sbjct: 727 IRLESNV--DAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDGRP 768
>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
Length = 1051
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 131/265 (49%), Gaps = 33/265 (12%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFS--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDR----------------AVDKMLFQEGNHARRPSL 283
+ AAG HS + +G V+ +G A+DK G ++ R S
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKGIKQGALDKTENIRGLYSNRESP 251
Query: 284 IS-KLPYSEEVV---CGGYHTCVLT 304
KL +++VV CG HT VLT
Sbjct: 252 CHVKLLRTQKVVYISCGDEHTAVLT 276
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 25/233 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQ 273
L +T + PRLI++L + + G H + +G+ + +G + ++ L +
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 274 EGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
E + P + L P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFSSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
>gi|327260067|ref|XP_003214857.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Anolis carolinensis]
Length = 409
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 13/286 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG YG+LGLG E + P V F + ++K + GG H+ LT+TG ++ G N
Sbjct: 15 WGANSYGQLGLGHREDVFLPQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCGQNKN 74
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
GQLG+ + L S V+Q++ G+ + + G+++ G NS GQLG+ +
Sbjct: 75 GQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFGQLGI-SQ 133
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
++ + ++E L AA G ++AVT G V WG G S + Q +
Sbjct: 134 TSEGSTVSKRIESLQEKVVNVAA-GLRHALAVTENGSVFQWGIGMSSQAKRACQGEMVPS 192
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
FLR+ P + LE +VKI A+G H+ + + G +Y++G+ K L + +
Sbjct: 193 FLRARQ---PCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNK-HKQLVNKDDFVL 248
Query: 280 RPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG 321
+P I + E V G H T G+++TWG + G LG
Sbjct: 249 KPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLG 294
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 142/310 (45%), Gaps = 42/310 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
L G G+LGLG E +CS+ S+ +ACG T+ L +G V++ G N FG
Sbjct: 68 LCGQNKNGQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFG 127
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLGIS+ S RI L+++VV ++ G H+ A+T +G ++ WG + Q K+A
Sbjct: 128 QLGISQTSEGSTVSKRIESLQEKVVNVAAGLRHALAVTENGSVFQWGIGMSSQ---AKRA 184
Query: 162 AK--VIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
+ ++P P KV L K A G + A+T G++ WG +L + +
Sbjct: 185 CQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNKHKQLVN-K 243
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--------- 264
+ +L + + Y G KV+ G+ H E G+V+ +G
Sbjct: 244 DDFVLKPQKIDAHY-------FGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLGRS 296
Query: 265 -----------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+A D+ +E H+ P+L+ L + ++ CG H + GG+ ++WG
Sbjct: 297 GLPYEQMGQDGKASDENSVKEPLHS--PALVPALTGASQIACGSEHNLAIV-GGQCFSWG 353
Query: 314 SNENGCLGIG 323
NE+G G G
Sbjct: 354 WNEHGMCGNG 363
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 116/240 (48%), Gaps = 28/240 (11%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWG 148
++ G N +GQLG+ L P + G ++ V I+ G HS+ +T GEL++ G
Sbjct: 12 LFTWGANSYGQLGLGHREDVFL-PQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCG 70
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
+N NGQLGLG + + L G Q A G++ ++ + G G+V S G+ G+
Sbjct: 71 QNKNGQLGLGH--TEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFGQ 128
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAGFLHSACIDENGRVYIFG--- 263
LG + TSE + + K +E ++ K+ AAG H+ + ENG V+ +G
Sbjct: 129 LG----------ISQTSEGS-TVSKRIESLQEKVVNVAAGLRHALAVTENGSVFQWGIGM 177
Query: 264 ----DRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
RA + AR+P ++ L + + V G H LT GELY WG+N++
Sbjct: 178 SSQAKRACQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNKH 237
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 33/209 (15%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
+P + E +K +A G +H LT+ G +Y G N QL ++ + L+P +I
Sbjct: 198 QPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNKHKQLVNKDD--FVLKPQKIDA 255
Query: 121 LK---KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--------LGKK--------A 161
++V ++ G+ H A T G+++ WG+ GQLG +G+
Sbjct: 256 HYFGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLGRSGLPYEQMGQDGKASDENSV 315
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ + P V L+G Q A G E ++A+ GG + SWG G G+G E+++
Sbjct: 316 KEPLHSPALVPALTG--ASQIACGSEHNLAIVGG-QCFSWGWNEHGMCGNGTEANVC--- 369
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
P+ + L K+ G HS
Sbjct: 370 ------APQPLDVLSSAKLLYVGCGAGHS 392
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+WGN + +L + + +P A F ++ + G H + TE G V+ G D
Sbjct: 231 VWGNNKHKQL-VNKDDFVLKPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWGRAD 289
Query: 100 FGQLGIS----ENIGYS---------LEPLRISGLKKEVV---QISTGYHHSSAITVDGE 143
+GQLG S E +G EPL L + QI+ G H+ AI V G+
Sbjct: 290 YGQLGRSGLPYEQMGQDGKASDENSVKEPLHSPALVPALTGASQIACGSEHNLAI-VGGQ 348
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+ WG N +G G G +A P P V
Sbjct: 349 CFSWGWNEHGMCGNGTEANVCAPQPLDV 376
>gi|359726911|ref|ZP_09265607.1| RCC1 domain-containing protein [Leptospira weilii str. 2006001855]
Length = 506
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 137/299 (45%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WGN G+LG+G+ + R P + + + A G H L L G +
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRTAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTI 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG N +S+ P+ + GL+ +V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMNPVAVVGLR-DVIQVIAGSEHSAALTENGEVYVWG 318
Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G+ +A P KVE L I KQ A G + +A+ G++ SWG S
Sbjct: 319 RNQYGNLGNGRLSAANTAQSTPVKVEGLPEI--KQIANGRDHILALASDGRIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G S TP + L + AG S I ++G V +G +
Sbjct: 377 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ E N + + ++V+ CG H VL GE+Y WG N G LG
Sbjct: 429 NTANLAIGETNTQKVYEPNKAVVGIDDVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 26/263 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
L+ GGAH+ FL + G VY TG N+FGQLG + G + + + + I ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSIRNISSIHFNQNN 189
Query: 135 SSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIPIPTKVECLSGIFTKQAALG 185
S AI +G +Y WG N+ GQLG+G + A P PT V + A G
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQP-PTLVPGIDDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAA 244
F ++ + G ++++G G+LG+G L + S P + L V IA
Sbjct: 247 FNHALILKSDGTIVAFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLRDVIQVIA- 300
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
G HSA + ENG VY++G + N A+ P + LP +++ G H
Sbjct: 301 -GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANTAQSTPVKVEGLPEIKQIANGRDHI 359
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
L S G +Y+WG N +G LGIG
Sbjct: 360 LALASDGRIYSWGLNASGQLGIG 382
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 23/218 (10%)
Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKV 171
L+KEV ++S G HS + +GE+Y G+N+ GQLG G VI +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSI 177
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPR 230
+S I Q S+A+ G+V +WG G+LG G ++ R+ + P
Sbjct: 178 RNISSIHFNQ-----NNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQPPT 232
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLIS 285
L+ ++ + A GF H+ + +G + FG V ++ + + P +
Sbjct: 233 LVPGID--DAVMGAYGFNHALILKSDGTIVAFGQNNVGQLGNGANDLNADSFSMNPVAVV 290
Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +V+ G H+ LT GE+Y WG N+ G LG G
Sbjct: 291 GLRDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNG 328
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 74/176 (42%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G L ++ PV + +K +A G H L L G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANTAQSTPVKVEGLPE--IKQIANGRDHILALASDGRIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N + P+ L + G S +I GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433
Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
+G+ + + P K V + + G + + G G++ WG G LG
Sbjct: 434 AIGETNTQKVYEPNKAVVGIDDVI--HFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4296 RPRLVAALQGKKINRVACGSAHT 4318
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G V++ G D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3296
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLG-HGNRSPCDR 4086
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT G+L+ WGK G+LG G ++ P VE
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4196 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++YTWG +N LG G
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG 693
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSFEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 25/256 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
+ P+L++ L+G KV AAG H + E+ V+ +G + D +
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 271 LFQEGNHARRPSLISK 286
+ A P L +K
Sbjct: 747 RITKPEPAALPGLDTK 762
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3232 TWGKGDYFRLGHG 3244
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3127 WGLGEYGRLGHG 3138
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGK 4075
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G ++ +G
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4285
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4286 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4320
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4044 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGR 4103
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4104 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4161
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4162 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4218
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4219 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4271
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4272 RPRLVAALQGKKINRVACGSAHT 4294
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 30/313 (9%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
+ R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +
Sbjct: 3015 IPRQITALSNYVVK---KVAVHSG-GRHAMALTVDGKIFS-WGEGDDGKLGHFSRMNCDK 3069
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 3070 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVL 3128
Query: 122 K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3129 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQG 3186
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q G + S+A+T G V +WG G RLGHG + + P++++ L G
Sbjct: 3187 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV---------RKPQVVEGLRGK 3237
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--E 292
K+ A G LH + + G+VY +GD Q+GN R+P+L+ L +
Sbjct: 3238 KIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTTVNRKPTLVQGLEGQKITR 3293
Query: 293 VVCGGYHTCVLTS 305
V CG H+ T+
Sbjct: 3294 VACGSSHSVAWTT 3306
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 481 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTY 539
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 540 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 597
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 598 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 648
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 649 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 708
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 709 SWGSNDQ 715
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G +++ G D
Sbjct: 2997 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3056
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3057 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3115
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3116 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3169
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3170 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3224
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3225 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3272
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 119/238 (50%), Gaps = 16/238 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2941 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3000
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 3001 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3059
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3060 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3110
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3111 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3168
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4004 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4062
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT G+L+ WGK G+LG G ++ P VE
Sbjct: 4063 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4120
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4121 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4171
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4172 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4231
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4232 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4265
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 467
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 468 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKLISALSG 523
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 524 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 571
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 572 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++YTWG +N LG G
Sbjct: 632 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG 669
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 25/256 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 496 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 554
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 555 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 613
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 614 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 671
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
+ P+L++ L+G KV AAG H + E+ V+ +G + D +
Sbjct: 672 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 722
Query: 271 LFQEGNHARRPSLISK 286
+ A P L +K
Sbjct: 723 RITKPEPAALPGLDTK 738
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3938 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3995
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3996 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4053
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4054 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4108
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4109 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4162
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4163 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4213
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2979 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3038
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3039 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3096
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3097 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3147
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3148 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3207
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3208 TWGKGDYFRLGHG 3220
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2933 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2990
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 2991 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3042
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+++ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3043 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3102
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3103 WGLGEYGRLGHG 3114
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3933 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3991
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3992 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4051
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G ++ +G
Sbjct: 4052 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4102
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4103 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4161
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4202 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4261
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4262 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4296
>gi|146295924|ref|YP_001179695.1| regulator of chromosome condensation, RCC1 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409500|gb|ABP66504.1| regulator of chromosome condensation, RCC1 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 730
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 153/335 (45%), Gaps = 79/335 (23%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G+ ES+ PV ++ A+A G H+L +T+ G +YA GLND GQ
Sbjct: 111 WGNNEYGQLGDGTKESKTTPVKILG----NVVAIAAGNYHSLAVTKNGDLYAWGLNDRGQ 166
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + +P++I V ++ G++ S AIT +G+LY WG N GQLG G K
Sbjct: 167 LGNGTRVDCN-KPIKIM---TNVKDVAAGWYTSFAITKNGDLYGWGANEVGQLGDGSKID 222
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K+ P V+ +SG+ + + G +A+T G++ +WG LG G+ +
Sbjct: 223 KIKP----VKIMSGV--QSVSAGSNHVLALTKKGELYAWGYNNDSELGFDP-----GWGK 271
Query: 223 STSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIFG----DRAVDKMLFQEGNH 277
+ SE R+ K+++G+ AG +S ID+NG ++ G D V K F++ N+
Sbjct: 272 NFSEKPVRVNFKDIKGISY--IYAGESYSLLIDKNGVLWGLGRGYTDTIVIKNKFRQSNN 329
Query: 278 AR-----------------------------------------------RPSLISKLPYS 290
+ RP LI K
Sbjct: 330 GKLMEFKPVKIMSNVMLASGKLAVTKDKKLYIFCNNTGPFIFGAPERVDRPVLIMK---- 385
Query: 291 EEVVC--GGYHTCVLTSGGELYTWGSNENGCLGIG 323
+C G H+ LT G+LY WG+N LG G
Sbjct: 386 NVSLCSAGADHSLALTKDGKLYGWGNNSYNQLGNG 420
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 6 LTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLG-SLESRWRPVV 64
L ++ +Y+K +G K+ T + A+ NG+ LG +LESR+ P
Sbjct: 30 LITLSTFYIKASNDMGKKIVYV-----DTGGNQNLAITENGELYEWELGGTLESRYLP-- 82
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
+ +H +K G AH L + ++G +Y G N++GQLG + P++I G
Sbjct: 83 -TKVMEH-VKIAKAGWAHVLAIDQSGNLYCWGNNEYGQLGDGTKESKT-TPVKILG---N 136
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQA 182
VV I+ G +HS A+T +G+LY WG N GQLG G + K I I T V K
Sbjct: 137 VVAIAAGNYHSLAVTKNGDLYAWGLNDRGQLGNGTRVDCNKPIKIMTNV--------KDV 188
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
A G+ S A+T G + WGA G+LG G + + + +K + GV+
Sbjct: 189 AAGWYTSFAITKNGDLYGWGANEVGQLGDGSKIDKI-----------KPVKIMSGVQS-- 235
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLIS 285
+AG H + + G +Y +G ++ F G N + +P ++
Sbjct: 236 VSAGSNHVLALTKKGELYAWGYNNDSELGFDPGWGKNFSEKPVRVN 281
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 108/248 (43%), Gaps = 34/248 (13%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS-TGYHH 134
+ GG L +TE G +Y L G +LE + E V+I+ G+ H
Sbjct: 51 VDTGGNQNLAITENGELYEWEL------------GGTLESRYLPTKVMEHVKIAKAGWAH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
AI G LY WG N GQLG G K +K P V+ L + A G S+AVT
Sbjct: 99 VLAIDQSGNLYCWGNNEYGQLGDGTKESKTTP----VKILGNVVA--IAAGNYHSLAVTK 152
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G + +WG G+LG+G T + IK + VK AAG+ S I
Sbjct: 153 NGDLYAWGLNDRGQLGNG-----------TRVDCNKPIKIM--TNVKDVAAGWYTSFAIT 199
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
+NG +Y +G V ++ +G+ + + + + V G H LT GELY WG
Sbjct: 200 KNGDLYGWGANEVGQL--GDGSKIDKIKPVKIMSGVQSVSAGSNHVLALTKKGELYAWGY 257
Query: 315 NENGCLGI 322
N + LG
Sbjct: 258 NNDSELGF 265
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 100/207 (48%), Gaps = 40/207 (19%)
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
K++V + TG + + AIT +GELY W +LG G ++ +P TKV K A
Sbjct: 46 KKIVYVDTGGNQNLAITENGELYEW------ELG-GTLESRYLP--TKVME----HVKIA 92
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G+ +A+ G + WG G+LG G + S + TP +K L V V I
Sbjct: 93 KAGWAHVLAIDQSGNLYCWGNNEYGQLGDGTKES---------KTTP--VKILGNV-VAI 140
Query: 243 AAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHAR----RPSLISKLPYSEEVVCG 296
AA + HS + +NG +Y +G DR Q GN R +P I + ++V G
Sbjct: 141 AAGNY-HSLAVTKNGDLYAWGLNDRG------QLGNGTRVDCNKP--IKIMTNVKDVAAG 191
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
Y + +T G+LY WG+NE G LG G
Sbjct: 192 WYTSFAITKNGDLYGWGANEVGQLGDG 218
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 17/156 (10%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN-SNGQLGLGKKAAKVIPIPTKV 171
+E I + VV +++GY H A+T DG LY WG + ++G++G G A + I V
Sbjct: 572 IESYVIEKVLNNVVSMASGYDHCLAVTKDGSLYAWGSDPAHGEIGNG-IAIPNLRIDKPV 630
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ + + K A G +S A+T G+V +WG G LG + S Y PR
Sbjct: 631 KVMDNV--KMVAAGANRSFALTKNGEVYAWGF-NLGTLGTDTD----------SWYEPRP 677
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+K EG V I+ G H + G +Y +GD ++
Sbjct: 678 VKVFEGA-VWISCKGG-HVLALTREGDLYGWGDNSL 711
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSGIF 178
+ K V S G HS A+T DG+LY WG NS QLG G K P+ PTK++ G
Sbjct: 383 IMKNVSLCSAGADHSLALTKDGKLYGWGNNSYNQLGNGTKN----PLCRPTKIDINVGEI 438
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI-KELEG 237
A G ++S + G++ WG+ ++ + F + P+++ KE+
Sbjct: 439 IGILA-GTQRSFLINKKGELFGWGS---------NINNTIDFSNNKIISKPKMVLKEIRQ 488
Query: 238 VKVKIAAAGFLHSACIDENGRVY--IFGDRAV-DKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + +NG++Y IF +A D + +Q R+ + + + + +
Sbjct: 489 VDTNQN-----ETFVVTKNGKMYALIFVVQAERDTLKWQIIKENRQK--MYNITNNVDKI 541
Query: 295 CGGYHTCVLTSGGELY 310
GY T +L G LY
Sbjct: 542 SAGYQTLILKKDGTLY 557
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 117/310 (37%), Gaps = 58/310 (18%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G G+ E RPV+ ++ + G H+L LT+ G +Y G N + QLG +
Sbjct: 367 GPFIFGAPERVDRPVLIM----KNVSLCSAGADHSLALTKDGKLYGWGNNSYNQLG-NGT 421
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
P +I E++ I G S I GEL+ WG N N + K+I P
Sbjct: 422 KNPLCRPTKIDINVGEIIGILAGTQRSFLINKKGELFGWGSNINNTIDFSNN--KIISKP 479
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKV-------------LSWG------------A 203
V L I +Q ++ VT GK+ L W
Sbjct: 480 KMV--LKEI--RQVDTNQNETFVVTKNGKMYALIFVVQAERDTLKWQIIKENRQKMYNIT 535
Query: 204 GGSGRLGHGQESSIL-------------GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
++ G ++ IL + S ++ +I+++ V + A+G+ H
Sbjct: 536 NNVDKISAGYQTLILKKDGTLYALKGKTSWKGSHTQIESYVIEKVLNNVVSM-ASGYDHC 594
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYHTCVLTS 305
+ ++G +Y +G D + GN P+L P + V G + LT
Sbjct: 595 LAVTKDGSLYAWGS---DPAHGEIGNGIAIPNLRIDKPVKVMDNVKMVAAGANRSFALTK 651
Query: 306 GGELYTWGSN 315
GE+Y WG N
Sbjct: 652 NGEVYAWGFN 661
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 71 HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST 130
++K +A G + LT+ G VYA G N G LG + Y P+++ + V IS
Sbjct: 634 DNVKMVAAGANRSFALTKNGEVYAWGFN-LGTLGTDTDSWYEPRPVKVF---EGAVWISC 689
Query: 131 GYHHSSAITVDGELYMWGKNSNGQL 155
H A+T +G+LY WG NS GQ+
Sbjct: 690 KGGHVLALTREGDLYGWGDNSLGQV 714
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
A G++ +AVT G + +WG+ + G +G+G + + + +K ++ VK
Sbjct: 588 ASGYDHCLAVTKDGSLYAWGSDPAHGEIGNG--------IAIPNLRIDKPVKVMDNVK-- 637
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
+ AAG S + +NG VY +G L + + P + + + C G H
Sbjct: 638 MVAAGANRSFALTKNGEVYAWGFNL--GTLGTDTDSWYEPRPVKVFEGAVWISCKGGHVL 695
Query: 302 VLTSGGELYTWGSNENG 318
LT G+LY WG N G
Sbjct: 696 ALTREGDLYGWGDNSLG 712
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 132/280 (47%), Gaps = 33/280 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLND 99
G GD L S+E R +C K +AC G H + T+ G VY G N
Sbjct: 80 GTGDI----LHSIEPRRVDHLCG-------KKIACLSYGSGPHVVIATDEGEVYTWGHNA 128
Query: 100 FGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+ QLG + + L P IS ++V++++ G HHS +T DGE++ WG N++GQ+G
Sbjct: 129 YNQLG-NGTTNHGLVPTHISTNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGS 187
Query: 158 GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G A + PIP KV CL A G S+AV G+V WG G+G+LG G
Sbjct: 188 GSTANQ--PIPRKVTGCLQNKIATTIACGQMCSMAVVESGEVYVWGYNGNGQLGLGS--- 242
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
S ++ TP I L+G++V G+ H+ + + G +Y +G + ++ +
Sbjct: 243 ------SGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWGANSYGQLGTGNKS 296
Query: 277 HARRPSLIS--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ P+ +S K E C HT T G +Y WG
Sbjct: 297 NQSYPTPVSVEKDRVIEIAACHSAHTSAAKTQSGHIYMWG 336
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSS 136
G L+ TE V+ G N G LG + I +S+EP R+ L K++ +S G H
Sbjct: 55 AGNEVLYSTENDEVFVLGTNCSGCLGTGD-ILHSIEPRRVDHLCGKKIACLSYGSGPHVV 113
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
T +GE+Y WG N+ QLG G ++P L + A G S+ +T G
Sbjct: 114 IATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHISTN-LGNRKVIEVACGSHHSLVLTSDG 172
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDE 255
+V +WG SG++G G + ++ PR + L+ A G + S + E
Sbjct: 173 EVFAWGYNNSGQVGSGS---------TANQPIPRKVTGCLQNKIATTIACGQMCSMAVVE 223
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
+G VY++G ++ + P I+ L ++VCG HT VLT G LY WG
Sbjct: 224 SGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWG 283
Query: 314 SNENGCLGIG 323
+N G LG G
Sbjct: 284 ANSYGQLGTG 293
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + + + CG AHTL LT+ G +YA G N +G
Sbjct: 229 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWGANSYG 288
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P +S K V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 289 QLGTGNKSNQSY-PTPVSVEKDRVIEIAACHSAHTSAAKTQSGHIYMWGQ-CRGQ----- 341
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 342 --SVTLPHLTHFSCTDDVF 358
>gi|357393793|ref|YP_004908634.1| hypothetical protein KSE_69190 [Kitasatospora setae KM-6054]
gi|311900270|dbj|BAJ32678.1| hypothetical protein KSE_69190 [Kitasatospora setae KM-6054]
Length = 430
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 145/300 (48%), Gaps = 28/300 (9%)
Query: 35 LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
L R WG G+LG GS+ S P S + +A GG H+L L + V A
Sbjct: 115 LTDRTVQSWGANGSGQLGDGSVFSHNAP--GQVVNLSSARDVAAGGWHSLALLDDQTVVA 172
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N++GQLG N S+ P+R+ GL K V+ I+ G +HS A+ DG ++ WG N NGQ
Sbjct: 173 WGRNNYGQLGNGTNSDSSV-PVRVEGLNK-VIAIAAGLNHSIALREDGTVWAWGYNINGQ 230
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG----------GGKVLSWGAG 204
LG G A++ +P P V L+G+ TK AA G ++A+ G G V +WG
Sbjct: 231 LGDGTSASRNVPAP--VGGLTGV-TKIAA-GCNHNLALVGPPSGGVKPTSGNAVKAWGYN 286
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
+G+L G S+I + YTP + + V AAG HS A D + ++ +G
Sbjct: 287 ATGQL--GDNSTI-------NRYTPVDTQGIWLGGVSQIAAGCNHSLAVTDSDNKLKAWG 337
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ ++ P + L + V G HT VL + +WG+N +G LG G
Sbjct: 338 QNTSGQVGDGTTDYRITPVPVPGLKGIQLVAGGREHTIVLLGDNTVRSWGANGSGQLGNG 397
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 120/286 (41%), Gaps = 42/286 (14%)
Query: 57 ESRWRPVVCS---AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
SR RPV+ + AF SL A+ G AH + + A G N GQLG +
Sbjct: 28 RSRLRPVLAAGLAAFTALSLAAVPAGTAHA----QEKRLKAWGNNRSGQLGDGTWTDFRT 83
Query: 114 EPLRISGLKK-EVVQISTGYHHSS-----AITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ GL EVV+I+ G S+ A+ D + WG N +GQLG G +
Sbjct: 84 TATTVLGLTSAEVVKIAAGGGGSATGHGLALLTDRTVQSWGANGSGQLGDGSVFSH--NA 141
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P +V LS + A G S+A+ V++WG G+LG+G S
Sbjct: 142 PGQVVNLS--SARDVAAGGWHSLALLDDQTVVAWGRNNYGQLGNGTNS---------DSS 190
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS 285
P ++ L KV AAG HS + E+G V+ +G ++ +G A R P+ +
Sbjct: 191 VPVRVEGLN--KVIAIAAGLNHSIALREDGTVWAWGYNINGQL--GDGTSASRNVPAPVG 246
Query: 286 KLPYSEEVVCGGYHTCVL----------TSGGELYTWGSNENGCLG 321
L ++ G H L TSG + WG N G LG
Sbjct: 247 GLTGVTKIAAGCNHNLALVGPPSGGVKPTSGNAVKAWGYNATGQLG 292
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+LG S +R+ PV + +A G H+L +T++ + A G N G
Sbjct: 283 WGYNATGQLGDNSTINRYTPVDTQGIWLGGVSQIAAGCNHSLAVTDSDNKLKAWGQNTSG 342
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
Q+G Y + P+ + GLK + ++ G H+ + D + WG N +GQLG G
Sbjct: 343 QVG-DGTTDYRITPVPVPGLKG-IQLVAGGREHTIVLLGDNTVRSWGANGSGQLGNGTTT 400
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
P+ T + L+G+ A +G + S+A
Sbjct: 401 ESSTPV-TTLTALTGVDKIAAPVGGDFSLA 429
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-----KKEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS + VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKLISAFCGKQAGQRVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+L+++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLVEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 39/276 (14%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C+ + +AC L L+ +G VY + +L P + GL
Sbjct: 443 PIQCAGLASLGVSQIACAEKRFLILSRSGRVYTQAYS-----------SDALAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ + + +S
Sbjct: 492 VSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPL-EEPKLISAFC 546
Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
KQA A G S A+T G++ +WG G GRLGHG S E P L
Sbjct: 547 GKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIPML 597
Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
+ L+G+KV A +G + + ENG+V+ +GD K+ + + P L+ KL
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 657
Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 658 LDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 123/246 (50%), Gaps = 21/246 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF----EKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG GD GRLG G P + SAF + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRG 579
Query: 99 DFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+L
Sbjct: 580 NYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 638
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P VE L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 639 GRG--GSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEE 696
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ P+L++ L+G KV AAG H + E+ V+ +G D+ +
Sbjct: 697 HV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN--DQCQHFDT 745
Query: 276 NHARRP 281
HA +P
Sbjct: 746 LHATKP 751
>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
Length = 993
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 134/270 (49%), Gaps = 34/270 (12%)
Query: 64 VCSAF-----EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI 118
+CSA +K + ++ G H L L+ G + YS+E R
Sbjct: 54 ICSAECVKLGKKMKIHSVDQGAEHMLILSSDGKPF--------------EYNYSIEHARF 99
Query: 119 SGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
+ +K ++QI+ G +HS A++ GEL+ WG+N +GQLG+G+ A IP P VE LSG
Sbjct: 100 QCILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFAS-IPTPQAVEHLSG 158
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ Q + G S+A++ G V SWG G+LG G + E P LI+ L+
Sbjct: 159 VPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGH---------TDGEDFPSLIETLD 209
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
+V+ A G H+A + +G V+ FG ++ + RP L+++L + ++
Sbjct: 210 NQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIA 269
Query: 295 CGGYHTCVLTSG-GELYTWGSNENGCLGIG 323
CG HT S G+++++GS + G LG G
Sbjct: 270 CGRRHTLAYVSDLGKVFSFGSGKEGQLGNG 299
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG + P + + ++ LACGG+HT LT G V+ G +GQ
Sbjct: 183 WGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQ 242
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G GQLG G
Sbjct: 243 LG-HNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGT 301
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE------QSVAVTGGGK-VLSW 201
++IP+P K+ L FE + V + GG + VL W
Sbjct: 302 HNQLIPLPMKL-------PSNEELKFESRTSDKELVMIAGGNQSVLLW 342
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 4/172 (2%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G L S P L ++ G AH++ L+ +G VY+ G ND G
Sbjct: 130 WGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLG 189
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ G L + ++V ++ G H++ +T DG ++ +G GQLG
Sbjct: 190 QLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQ 249
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L+G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 250 NEL--RPRLVTELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNG 299
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 135/275 (49%), Gaps = 26/275 (9%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 52 GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V L A G S+AV G+V WG G+G+LG G S
Sbjct: 169 PIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGS---------SG 219
Query: 225 SEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
++ TP RL L+GV+V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 220 NQSTPCRL--ALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 275
Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 276 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 310
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 125/272 (45%), Gaps = 17/272 (6%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T V+ G N G LG+ + + ++E
Sbjct: 6 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEVFVLGTNCCGCLGLGD-VQSTIE 64
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T +GE++ WG N+ QLG G ++P
Sbjct: 65 PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G ++ R TS +++
Sbjct: 125 -LSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVV 183
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE 291
+ A G + S + +NG VY++G ++ L GN + L + +
Sbjct: 184 VNI--------ACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRLALQGVRVQ 235
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V CG HT VLT G++Y WG+N G LG G
Sbjct: 236 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 267
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 3/161 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V S+ + + +ACG ++ + + G VY G N G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNG 211
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+ + G P R++ V +++ GY H+ +T +G++Y WG NS GQLG G K+
Sbjct: 212 QLGLGSS-GNQSTPCRLALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 270
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ P P VE I A S A T GG V WG
Sbjct: 271 NQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWG 310
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 14/140 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCS-AFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG G+LGLGS ++ P C A + ++ +ACG AHTL LT+ G VYA G N +
Sbjct: 204 VWGYNGNGQLGLGSSGNQSTP--CRLALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSY 261
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLG 158
GQLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 262 GQLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ---- 315
Query: 159 KKAAKVIPIPTKVECLSGIF 178
+ V+P T + C +F
Sbjct: 316 ---SVVLPHLTHLSCTDDVF 332
>gi|383319179|ref|YP_005380020.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
gi|379320549|gb|AFC99501.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
Length = 453
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 136/287 (47%), Gaps = 21/287 (7%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ ++G LG G+ E+ PV + H + A++ G H L L G V+A G N G
Sbjct: 104 WGDNEFGELGDGTNEETSLEPVQVAGL--HDIIAISTSGTHCLALRRDGTVWAWGWNVAG 161
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLGI P+++ GL ++ IS GY S AI DG L+ WG N G+LG G
Sbjct: 162 QLGIGTTSEGEYTPVQVPGLS-DIKIISAGYQCSMAIDKDGRLWAWGSNGRGKLGDGTTI 220
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ PI ++ + + + A ++A+ G V +WG LG SS+
Sbjct: 221 TRLYPIQVPIDDVIDVAASEGA----HTLALKKDGTVWAWGWNQENELGFVSGSSV---- 272
Query: 222 RSTSE-YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKMLFQEGN 276
S E +TP ++K ++ V V ++ +S + +G V+I+G+ R + L+ G
Sbjct: 273 NSVKECHTPVMVKGVDSV-VSVSTTDS-NSIALRSDGTVWIWGNGQQGRLGNGALY--GA 328
Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P + L + G H +T G +Y WG N+ G +G G
Sbjct: 329 DSATPQQVPGLENVVAIAGGSAHIMAMTGDGSVYAWGDNQGGQIGNG 375
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 25/281 (8%)
Query: 53 LGSLESRWRPVVCSA----FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
+G L +R +P S+ + A++ G LFL G V+ G N+FG+LG N
Sbjct: 58 MGFLPNRGKPFFQSSTPVVVNITDVSAVSAGNFFVLFLKNDGTVWGWGDNEFGELGDGTN 117
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
SLEP++++GL +++ IST H A+ DG ++ WG N GQLG+G + P
Sbjct: 118 EETSLEPVQVAGL-HDIIAISTSGTHCLALRRDGTVWAWGWNVAGQLGIGTTSEGEY-TP 175
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+V LS I K + G++ S+A+ G++ +WG+ G G+LG G + L ++
Sbjct: 176 VQVPGLSDI--KIISAGYQCSMAIDKDGRLWAWGSNGRGKLGDGTTITRLYPIQVP---- 229
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR------PS 282
I ++ + +AA+ H+ + ++G V+ +G +++ F G+ P
Sbjct: 230 ---IDDV----IDVAASEGAHTLALKKDGTVWAWGWNQENELGFVSGSSVNSVKECHTPV 282
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + V ++ L S G ++ WG+ + G LG G
Sbjct: 283 MVKGVDSVVSVSTTDSNSIALRSDGTVWIWGNGQQGRLGNG 323
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +R P+ + A GAHTL L + G V+A G N +
Sbjct: 206 WGSNGRGKLGDGTTITRLYPIQVPI--DDVIDVAASEGAHTLALKKDGTVWAWGWNQENE 263
Query: 103 LGIS-----ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
LG ++ P+ + G+ VV +ST +S A+ DG +++WG G+LG
Sbjct: 264 LGFVSGSSVNSVKECHTPVMVKGVDS-VVSVSTTDSNSIALRSDGTVWIWGNGQQGRLGN 322
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G P +V L + A G +A+TG G V +WG G++G+G+
Sbjct: 323 GALYGADSATPQQVPGLENVVA--IAGGSAHIMAMTGDGSVYAWGDNQGGQIGNGE---- 376
Query: 218 LGFLRSTSEYT-PRLIKELEG 237
FL T T P L+ +G
Sbjct: 377 --FLSYTGAVTRPTLVIRGDG 395
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 93/258 (36%), Gaps = 69/258 (26%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGE---------------------------------- 143
+S +VV I G H S A+ DG
Sbjct: 25 VSAASSKVVAIDAGGHLSLALKDDGTVMAWGTMMGFLPNRGKPFFQSSTPVVVNITDVSA 84
Query: 144 ----------------LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
++ WG N G+LG G + P +V L I +
Sbjct: 85 VSAGNFFVLFLKNDGTVWGWGDNEFGELGDGTNEETSLE-PVQVAGLHDIIAISTS--GT 141
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+A+ G V +WG +G+LG G S EYTP + L +KI +AG+
Sbjct: 142 HCLALRRDGTVWAWGWNVAGQLGIGTTSE--------GEYTPVQVPGLS--DIKIISAGY 191
Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG---GYHTCVLT 304
S ID++GR++ +G K+ +G R I ++P + + G HT L
Sbjct: 192 QCSMAIDKDGRLWAWGSNGRGKL--GDGTTITRLYPI-QVPIDDVIDVAASEGAHTLALK 248
Query: 305 SGGELYTWGSNENGCLGI 322
G ++ WG N+ LG
Sbjct: 249 KDGTVWAWGWNQENELGF 266
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 42 LWGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
+WGNG GRLG G+L P E ++ A+A G AH + +T G VYA G N
Sbjct: 311 IWGNGQQGRLGNGALYGADSATPQQVPGLE--NVVAIAGGSAHIMAMTGDGSVYAWGDNQ 368
Query: 100 FGQLGISENIGYS 112
GQ+G E + Y+
Sbjct: 369 GGQIGNGEFLSYT 381
>gi|428170480|gb|EKX39405.1| hypothetical protein GUITHDRAFT_59944, partial [Guillardia theta
CCMP2712]
Length = 234
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 123/250 (49%), Gaps = 22/250 (8%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGI----SENIGYSLEPLRISGLKKEVVQISTGYH 133
GG H+L L G V A G N GQLG+ S+ G+ L+ L +V ++ G+
Sbjct: 3 AGGEHSLLLFSNGSVLAWGSNSDGQLGLPPSCSDAAGHLLQGL------PAIVSVAAGHR 56
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
HS A+T DG +Y WG N GQLG G + P S + AA G S+A+
Sbjct: 57 HSLALTADGSVYAWGANVPGQLGDGSLESTWRPTCVLSSRGSERVVRVAA-GRAHSMALL 115
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G V++WG G+L GQE LR PR + +GV+V AAG +HS +
Sbjct: 116 SNGTVMAWGWDAFGQL--GQEEPQGAALR------PRAVALPQGVRVCQIAAGGVHSLAL 167
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
DE G+V+ +G ++ +++ RP ++ L + + G H+ + GG LY WG
Sbjct: 168 DEKGQVWGWGGNGCGQVGEGRVSYSSRPVVV--LEEASSIAAGASHSLAVARGG-LYGWG 224
Query: 314 SNENGCLGIG 323
SN NG LG G
Sbjct: 225 SNANGELGDG 234
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G+LG GSLES WRP V S+ + +A G AH++ L G V A G + FG
Sbjct: 70 WGANVPGQLGDGSLESTWRPTCVLSSRGSERVVRVAAGRAHSMALLSNGTVMAWGWDAFG 129
Query: 102 QLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG E G +L P R L + V QI+ G HS A+ G+++ WG N GQ+G G+
Sbjct: 130 QLGQEEPQGAALRP-RAVALPQGVRVCQIAAGGVHSLALDEKGQVWGWGGNGCGQVGEGR 188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
+ P+ E S A G S+AV GG + WG+ +G LG G
Sbjct: 189 VSYSSRPVVVLEEASS------IAAGASHSLAVARGG-LYGWGSNANGELGDG 234
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 105/232 (45%), Gaps = 32/232 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL------ACGGAHTLFLTETGCVYATG 96
WG+ G+LGL P CS H L+ L A G H+L LT G VYA G
Sbjct: 20 WGSNSDGQLGL--------PPSCSDAAGHLLQGLPAIVSVAAGHRHSLALTADGSVYAWG 71
Query: 97 LNDFGQLGISENIGYSLEPLRI--SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
N GQLG ++ + P + S + VV+++ G HS A+ +G + WG ++ GQ
Sbjct: 72 ANVPGQLG-DGSLESTWRPTCVLSSRGSERVVRVAAGRAHSMALLSNGTVMAWGWDAFGQ 130
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG + + P V G+ Q A G S+A+ G+V WG G G++G G+
Sbjct: 131 LGQEEPQGAAL-RPRAVALPQGVRVCQIAAGGVHSLALDEKGQVWGWGGNGCGQVGEGRV 189
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
S Y+ R + LE + AAG HS + G +Y +G A
Sbjct: 190 S-----------YSSRPVVVLE--EASSIAAGASHSLAVARGG-LYGWGSNA 227
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ D G+LG + E P V ++ +ACG H+L LT G +Y+ G N +G
Sbjct: 114 WGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173
Query: 102 QLGIS--ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG++ ++ + PLR++ L + I+ G +HS I+ G ++ WG+N+ GQLGL
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLN 233
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ + P T+++ L + + A G E SV +T G V + GAG G+LGHG
Sbjct: 234 DETNRAYP--TQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG------ 285
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
S++E PR++ EL G + A G H+ A + G+VY FG
Sbjct: 286 ---FSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFG 328
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 137/286 (47%), Gaps = 15/286 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT TG VYA G ND+
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + P I L+ V +QIS G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHDLP---TKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +++ +P V L Q A G S+A+T G++ SWG+ G+LG + +
Sbjct: 127 E-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
T P + L G+ + A G HS I ++G V+ +G ++ + +
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239
Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 22/188 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P ++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P+LI EL+ + + G HS + + G+V +
Sbjct: 66 SNDYSQLGHDLPTK-----------RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114
Query: 263 GD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A +K + Q R+ L+SK ++ CG H+ LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATEKEIVQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170
Query: 316 ENGCLGIG 323
G LG+
Sbjct: 171 IYGQLGVN 178
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 14/184 (7%)
Query: 43 WGNGDYGRLGLGS---LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S L P+ + L A+ACGG H+ ++++G V+ G N+
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 100 FGQLGISE--NIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG+++ N Y L+ LR G++ ++ G S +T +G ++ G + GQL
Sbjct: 227 CGQLGLNDETNRAYPTQLKTLRTLGVRF----VACGDEFSVFLTNEGGVFTCGAGAYGQL 282
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQE 214
G G + +++P V L G Q A G ++A V GKV ++G G SG+LG
Sbjct: 283 GHGFSSNEMLP--RMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRST 340
Query: 215 SSIL 218
S++
Sbjct: 341 KSLM 344
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G++Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P S+ + + +ACG HT+ ++ G +Y G + +GQ
Sbjct: 53 WGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQ 112
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + L P R+ L+ + QIS G+ H+ A+T DG+LY WG N GQ+G G
Sbjct: 113 LGHGD-FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 171
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
PI K + Q + G+ ++AVT V SWG G +G+LGHG+
Sbjct: 172 DHCSPIQIKFPQDQKVI--QISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGE-------- 221
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYI 261
S TP + LE + V + + S+ ID +G+ ++
Sbjct: 222 -SVDRNTPMI---LEALSVDGCSGQQIESSNIDPSSGKTWV 258
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 13/222 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ E P AFE S+K +A G HT +TE G ++ G +G
Sbjct: 1 WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + L P ++S + ++V ++ G+ H+ +++ G LY +G + GQLG G
Sbjct: 61 LGLGDR-NDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFE 119
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P ++E L G Q + G+ ++A+T GK+ WG G++G G
Sbjct: 120 DRL--VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD-------- 169
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ +P IK + KV + G+ H+ + + V+ +G
Sbjct: 170 -NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWG 210
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 17/232 (7%)
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ SL P +I + + ++ G H++A+T DGEL+ WG G
Sbjct: 2 GRNQNGQLGLG-TTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LGLG + +++P KV + G A G+ +++V+ G + ++G G+LGHG
Sbjct: 61 LGLGDRNDRLVP--QKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF 118
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
L P ++ L G + + G+ H+ + +G++Y +G ++ +
Sbjct: 119 EDRL---------VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD 169
Query: 275 GNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I K P ++V+ CG HT +T +++WG NG LG G
Sbjct: 170 NIDHCSPIQI-KFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHG 220
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 89/191 (46%), Gaps = 37/191 (19%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG+N NGQLGLG ++P K++ GI K A G E + AVT G++ WG G
Sbjct: 1 WGRNQNGQLGLGTTEDSLVP--QKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRY 58
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
G LG G + L P+ + ++G K+ + A G+ H+ + G +Y +G
Sbjct: 59 GNLGLGDRNDRL---------VPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 109
Query: 264 ----------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTW 312
DR V L A R IS+ + GG+ HT LT+ G+LY W
Sbjct: 110 YGQLGHGDFEDRLVPHRL-----EALRGDNISQ-------ISGGWRHTMALTTDGKLYGW 157
Query: 313 GSNENGCLGIG 323
G N+ G +G G
Sbjct: 158 GWNKFGQVGAG 168
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis
domestica]
Length = 4706
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G V++ G D
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3293
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 128/278 (46%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + GL
Sbjct: 443 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYN-------SDTLG----PQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + SVA+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3229 TWGKGDYFRLGHG 3241
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+G + +T D ++ WG G+LG G + +P K++ L+G+ + G + S
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFS 4081
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA+T G V +WG G RLGHG + + PR ++ L+G KV A G LH
Sbjct: 4082 VALTKSGAVYTWGKGDYHRLGHGSDDHV---------RRPRQVQGLQGKKVIAIATGSLH 4132
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
C E+G VY +GD ++ N +RP L++ L + V CG HT
Sbjct: 4133 CVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4185
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3063
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3123
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3124 WGLGEYGRLGHG 3135
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P+ + + + CG ++ LT++G VY G D+ +
Sbjct: 4041 WGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4100
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + P ++ GL+ K+V+ I+TG H T DGE+Y WG N GQLG G
Sbjct: 4101 LGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4159
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
A I P V L G + A G ++A
Sbjct: 4160 A--IQRPRLVAALQGKKINRVACGSAHTLA 4187
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 15/187 (8%)
Query: 67 AFEKHSLKALACGG--AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
A + + + +ACG A TL LT+ V++ G D+G+LG + G + P++I L
Sbjct: 4011 ALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV-PMKIDSLTGL 4069
Query: 125 -VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
VV++ G S A+T G +Y WGK +LG G + P +V+ L G A
Sbjct: 4070 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH--VRRPRQVQGLQGKKVIAIA 4127
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G V T G+V +WG G+LG G ++I PRL+ L+G K+
Sbjct: 4128 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAI---------QRPRLVAALQGKKINRV 4178
Query: 244 AAGFLHS 250
A G H+
Sbjct: 4179 ACGSAHT 4185
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 84/213 (39%), Gaps = 42/213 (19%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV--- 198
G +Y WG N GQLG G + AKV +PT E L+ + Q G + AVT GKV
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEAL 4012
Query: 199 --------------------------LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
SWG G G+LG G S P I
Sbjct: 4013 QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMKI 4063
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4064 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4123
Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4124 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4156
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
WG GD RLG G+ E P + + + +A G H L LTE V++ G ND
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
F L I++ EP + GL K +V I+ G S A
Sbjct: 742 HFDTLRITKP-----EPTALPGLDTKHIVGIACGPAQSFA 776
>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 390
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 132/289 (45%), Gaps = 19/289 (6%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLN 98
+L G G GRLG G P + + K +KA + CG H++ ++ G VY G
Sbjct: 69 SLGGLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRG 128
Query: 99 DFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G LG NI L ++ LK V Q+ +HS +T DG++Y +G +G+LG
Sbjct: 129 YKGFLGHKNQNNIRSFLLVDALASLK--VTQVCAARNHSLVVTSDGQVYSFGFPKHGRLG 186
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G A + +P T +E L G Q + +T G+V WG+G G+LG G S
Sbjct: 187 HGDDAYRRLP--TMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNES 244
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ P L++ LEG +K G+ +A I+ G ++ +G ++ +
Sbjct: 245 ---------HFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEE 295
Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ PSL++ L + CG H ++ LYTWG N G LG G
Sbjct: 296 NRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLGHG 344
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 24/236 (10%)
Query: 82 HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
H+L +T G VY+ G G+LG ++ Y P I GL+ K+VVQ + H++ +T
Sbjct: 164 HSLVVTSDGQVYSFGFPKHGRLGHGDD-AYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTD 222
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G+++MWG ++G+LG G + P+ V L G K G++ + A+ G + +
Sbjct: 223 AGQVFMWGSGTDGKLGQGDNESHFAPV--LVRALEGKGIKSIQCGYDFAAAINVEGHLFT 280
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
WG G GRLGHG E + P L+ L V ++ A G H A I + +Y
Sbjct: 281 WGHGLGGRLGHGDEE---------NRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLY 331
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKL---PYSE--------EVVCGGYHTCVLTS 305
+G A ++ + + P++++ L P + +V CG HT L S
Sbjct: 332 TWGKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRGRVAKVSCGANHTASLVS 387
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVTGGGKVLSW 201
+ + G S G+LG G + + PT V+ L GI K G+ S+ ++ G+V +
Sbjct: 68 ISLGGLGSTGRLGHGDE--RKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTC 125
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G LGH +++I FL L+ L +KV A HS + +G+VY
Sbjct: 126 GRGYKGFLGHKNQNNIRSFL---------LVDALASLKVTQVCAARNHSLVVTSDGQVYS 176
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
FG ++ + + R P++I L + + C G H VLT G+++ WGS +G
Sbjct: 177 FGFPKHGRLGHGDDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGK 236
Query: 320 LGIG 323
LG G
Sbjct: 237 LGQG 240
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+G G+LG G ES + PV+ A E +K++ CG + G ++ G G
Sbjct: 228 MWGSGTDGKLGQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + ++ L + + + I+ G H +AI+ LY WGKN+ GQLG G +
Sbjct: 288 RLGHGDEENRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRH 347
Query: 162 AKVIP 166
+ P
Sbjct: 348 DRHGP 352
>gi|242021219|ref|XP_002431043.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
corporis]
gi|212516272|gb|EEB18305.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
corporis]
Length = 369
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 146/297 (49%), Gaps = 34/297 (11%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+G GD G+LGLG S+ R +P + E ++ + GG HT+ L++ G VY G +D G
Sbjct: 46 FGQGDVGQLGLGTSITERGKPSLVKTLE--NIVDVCAGGMHTVCLSKDGVVYTFGCDDEG 103
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG S EP ++ L VQI+ G HS+A+ DG ++ WG ++S+G +GL
Sbjct: 104 ALGREATDENSFEPGQVC-LPGSAVQITAGDSHSAALLDDGRVFAWGSFRDSHGAMGLTV 162
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + PI + L + A G + V +T G++ + G G+LG
Sbjct: 163 QGKEKRPI----QLLQDKVITKIASGADHLVMLTFDGQLYTCGCAEQGQLG--------- 209
Query: 220 FLRSTSEYTPRLIKE------LEGVKV--KIAAAGFL--HSACIDENGRVYIFGDRAVDK 269
R ++ ++ R ++ L G + K + F+ H+ +DENG+VY+ G + +
Sbjct: 210 --RVSNRFSSRESRQGLSHLLLPGRILFNKRSKYDFIDHHTMALDENGKVYVLGRKDYGR 267
Query: 270 M-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + A+ +L+S L E ++ CG + +T G Y WG NG LG+G
Sbjct: 268 LGLGKNCEDAKELTLVSTLSNDECTDIACGSSVSFAVTKSGACYAWGMGSNGQLGMG 324
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 102/231 (44%), Gaps = 29/231 (12%)
Query: 37 RRFAALWGN--GDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
R FA WG+ +G +GL RP+ + + +A G H + LT G +Y
Sbjct: 144 RVFA--WGSFRDSHGAMGLTVQGKEKRPI--QLLQDKVITKIASGADHLVMLTFDGQLYT 199
Query: 95 TGLNDFGQLGISEN----------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
G + GQLG N + + L P RI K+ HH+ A+ +G++
Sbjct: 200 CGCAEQGQLGRVSNRFSSRESRQGLSHLLLPGRILFNKRSKYDFID--HHTMALDENGKV 257
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y+ G+ G+LGLGK + T V LS A G S AVT G +WG G
Sbjct: 258 YVLGRKDYGRLGLGKNCEDAKEL-TLVSTLSNDECTDIACGSSVSFAVTKSGACYAWGMG 316
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLI--KELEGVKVKIAAAGFLHSACI 253
+G+LG G + S + + P I K+LEG V + +AG H+ +
Sbjct: 317 SNGQLGMGDDDSDI--------FEPSKILGKQLEGKNVHLVSAGGQHTVLL 359
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 127 QISTGYHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+IS +IT + G + +G+ GQLGLG + P+ V+ L I G
Sbjct: 25 RISIVRDEKPSITKIPGLVLTFGQGDVGQLGLGTSITERGK-PSLVKTLENIV--DVCAG 81
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+V ++ G V ++G G L G+E++ + + P + L G V+I A
Sbjct: 82 GMHTVCLSKDGVVYTFGCDDEGAL--GREAT------DENSFEPGQVC-LPGSAVQI-TA 131
Query: 246 GFLHSACIDENGRVYIFGD--RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
G HSA + ++GRV+ +G + M +RP + + ++ G H +L
Sbjct: 132 GDSHSAALLDDGRVFAWGSFRDSHGAMGLTVQGKEKRPIQLLQDKVITKIASGADHLVML 191
Query: 304 TSGGELYTWGSNENGCLG 321
T G+LYT G E G LG
Sbjct: 192 TFDGQLYTCGCAEQGQLG 209
>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
Full=Cyclin-E-binding protein 1; AltName: Full=HECT
domain and RCC1-like domain-containing protein 5
gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 28/250 (11%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSS 136
G H L L+ G + E YS++ LR + +K+++QI+ G +HS
Sbjct: 105 GAEHMLILSSDGKPF-------------EYDNYSMKHLRFESILQEKKIIQITCGDYHSL 151
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A++ GEL+ WG+N +GQLG+G+K P VE L+G+ Q + G S+A++ G
Sbjct: 152 ALSKGGELFAWGQNLHGQLGVGRKFPSTT-TPQIVEHLAGVPLAQISAGEAHSMALSMSG 210
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+ SWG G+LG G + S+ P LI+ L+ KV+ A G HSA + ++
Sbjct: 211 NIYSWGKNECGQLGLGH---------TESKDDPSLIEGLDNQKVEFVACGGSHSALLTQD 261
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSG-GELYTWG 313
G ++ FG ++ + RP L+++L ++ CG +HT S G+++++G
Sbjct: 262 GLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFG 321
Query: 314 SNENGCLGIG 323
S ++G LG G
Sbjct: 322 SGKDGQLGNG 331
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 19/264 (7%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGLG +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK--DDPSLIEGLDNQKVEFVAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELVGYRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT--- 300
G H+ A + + G+V+ FG D L G + L K+ SEE+ + +
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGS-GKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKE 360
Query: 301 CVLTSGGE--LYTWGSNENGCLGI 322
++ +GG + W EN + +
Sbjct: 361 LIMIAGGNQSILLWIKKENSYVNL 384
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGLG ES+ P + + ++ +ACGG+H+ LT+ G ++ G GQ
Sbjct: 215 WGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G +GQLG G
Sbjct: 275 LG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 161 AAKVIPIPTKV 171
+++P+P KV
Sbjct: 334 RDQLMPLPVKV 344
>gi|427797227|gb|JAA64065.1| Putative alpha-tubulin suppressor, partial [Rhipicephalus
pulchellus]
Length = 606
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 138/281 (49%), Gaps = 28/281 (9%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
G+ G LGLG P A + + ALA G G H L +TE+G + + G N + Q
Sbjct: 123 GSNSSGCLGLGDTHGSLEPRKVDALCRKGIHALAYGSGPHVLAVTESGELLSWGHNGYCQ 182
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + N L P IS GL V Q++ G HHS A+T +G++Y WG+N+ GQ+G G
Sbjct: 183 LGNNCNT-QGLVPSSISAGLSHRVAQVACGSHHSLALTTNGDVYAWGQNNCGQVGSGSTT 241
Query: 162 AKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P P KV SGI ++ A G S+AV G+V WG G+G+LG G
Sbjct: 242 NQ--PTPRKVS--SGIGGRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGN----- 292
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
+ ++ +P + L+GV + G+ H+ + + G +Y +G + ++ GN A
Sbjct: 293 ----NVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWGANSYGQL--GTGNKA 346
Query: 279 RRPSLISKLPYS----EEVVCGGYH--TCVLTSGGELYTWG 313
+ S K+P E+ Y+ + V+T +Y WG
Sbjct: 347 NQVSPF-KMPTDIGRIVEIAASHYNHISAVMTQTSRVYMWG 386
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 13/223 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ Y +LG P SA H + +ACG H+L LT G VYA G N+ GQ
Sbjct: 175 WGHNGYCQLGNNCNTQGLVPSSISAGLSHRVAQVACGSHHSLALTTNGDVYAWGQNNCGQ 234
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+G SG+ + + ++ G S A+ +GE++ WG N NGQLGLG
Sbjct: 235 VGSGSTTNQPTPRKVSSGIGGRRCIGVACGQTSSMAVMENGEVFGWGYNGNGQLGLGNNV 294
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P +V L G+ + G+ ++A++ G + +WGA G+LG G ++
Sbjct: 295 NQTSPC--RVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWGANSYGQLGTGNKA------ 346
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ +P + G V+IAA+ + H SA + + RVY++G
Sbjct: 347 ---NQVSPFKMPTDIGRIVEIAASHYNHISAVMTQTSRVYMWG 386
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 118/257 (45%), Gaps = 21/257 (8%)
Query: 76 LAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
LAC G L +T+ V+A G N G LG+ + G SLEP ++ L +K + ++
Sbjct: 99 LACVFGSSGNEALMVTQDDDVFALGSNSSGCLGLGDTHG-SLEPRKVDALCRKGIHALAY 157
Query: 131 GY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G H A+T GEL WG N QLG ++P + + Q A G S
Sbjct: 158 GSGPHVLAVTESGELLSWGHNGYCQLGNNCNTQGLVP--SSISAGLSHRVAQVACGSHHS 215
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFL 248
+A+T G V +WG G++G G +T++ TPR + + G + A G
Sbjct: 216 LALTTNGDVYAWGQNNCGQVGSGS---------TTNQPTPRKVSSGIGGRRCIGVACGQT 266
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSG 306
S + ENG V+ +G ++ + P ++ L +VVCG HT L+
Sbjct: 267 SSMAVMENGEVFGWGYNGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDE 326
Query: 307 GELYTWGSNENGCLGIG 323
G LYTWG+N G LG G
Sbjct: 327 GVLYTWGANSYGQLGTG 343
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P + + + + CG AHT+ L++ G +Y G N +GQ
Sbjct: 280 WGYNGNGQLGLGNNVNQTSPCRVTNLQGVVIHKVVCGYAHTMALSDEGVLYTWGANSYGQ 339
Query: 103 LGISENIGYSLEPLRISGLKKEVVQI-STGYHHSSAI-TVDGELYMWGKNSNGQLGLGKK 160
LG + N + P ++ +V+I ++ Y+H SA+ T +YMWG+ GQ
Sbjct: 340 LG-TGNKANQVSPFKMPTDIGRIVEIAASHYNHISAVMTQTSRVYMWGQ-CRGQ------ 391
Query: 161 AAKVIPIPTKVECLSGIF 178
+ +P T + +F
Sbjct: 392 -SVTVPTETPFHSIHDVF 408
>gi|291223965|ref|XP_002731978.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
2-like [Saccoglossus kowalevskii]
Length = 1049
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 143/309 (46%), Gaps = 30/309 (9%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
+ + LQR + WG YG+LGLG + + +P + + GG HTL LT+ G
Sbjct: 19 VGTCLQRGMFS-WGANSYGQLGLGHQDDKSKPEKILKIPDGKIVDVTGGGGHTLLLTDCG 77
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y+ G N GQLG+ S+ RI L V++++ G+ AIT G+LY WG N
Sbjct: 78 AIYSCGWNSKGQLGLGHTDNLSVFK-RIDHLPP-VIKVTCGWDFCLAITEVGDLYAWGCN 135
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG+ + IPTK++ S T AA G S+AVT GK+ SWG+ G+LG
Sbjct: 136 VFGQLGI-PEIDSFTAIPTKIQIFSRNVTSIAA-GLRHSLAVTNDGKLWSWGSARKGQLG 193
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH--SACIDENGRVYIFGDRAVD 268
+ Q + L + P+ + +LE + + + +AC G +Y++G +
Sbjct: 194 NDQSKTGYQLL----QRVPKQVHKLENISSVSSGSYHSTALTAC----GNMYLWGSNKHN 245
Query: 269 KM------LFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWG 313
++ + Q G ++ L + E V G H +T ++ WG
Sbjct: 246 QLTNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWG 305
Query: 314 SNENGCLGI 322
N+ LGI
Sbjct: 306 RNDYSQLGI 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 25/292 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEK----HSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
G+LGLG ++ S F++ + + CG L +TE G +YA G N FGQLG
Sbjct: 88 GQLGLGHTDN------LSVFKRIDHLPPVIKVTCGWDFCLAITEVGDLYAWGCNVFGQLG 141
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--LGKKAA 162
I E ++ P +I + V I+ G HS A+T DG+L+ WG GQLG K
Sbjct: 142 IPEIDSFTAIPTKIQIFSRNVTSIAAGLRHSLAVTNDGKLWSWGSARKGQLGNDQSKTGY 201
Query: 163 KVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+++ +P +V L I + + S A+T G + WG+ +L + + +
Sbjct: 202 QLLQRVPKQVHKLENISSVSSGS--YHSTALTACGNMYLWGSNKHNQLTNSVQGVVQSGG 259
Query: 222 RSTSEYTP---RLIKELEGVKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGN 276
S + P +L EL G + +A +G+ H I + V+ +G ++ + GN
Sbjct: 260 SSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWGRNDYSQLGISLTGN 319
Query: 277 H-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +P + L +++ CG H L+ ++ WG NE+G G G
Sbjct: 320 NCAKKDVTKPKELVILKDIKQIACGSEHNLALSDDNKVLAWGWNEHGSCGNG 371
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF---LTETGCVYATGLND 99
WG+ G+LG ++ ++ + + H L+ ++ + + LT G +Y G N
Sbjct: 184 WGSARKGQLGNDQSKTGYQLLQRVPKQVHKLENISSVSSGSYHSTALTACGNMYLWGSNK 243
Query: 100 FGQL-----GISENIGYSLEPLRISGLK--------KEVVQISTGYHHSSAITVDGELYM 146
QL G+ ++ G S E + K ++++ + +G+ H AIT D ++
Sbjct: 244 HNQLTNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFG 303
Query: 147 WGKNSNGQLGL----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
WG+N QLG+ A K + P ++ L I KQ A G E ++A++ KVL+WG
Sbjct: 304 WGRNDYSQLGISLTGNNCAKKDVTKPKELVILKDI--KQIACGSEHNLALSDDNKVLAWG 361
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G G+G+E ++L TP++I +L K+++
Sbjct: 362 WNEHGSCGNGKEENVL---------TPQVIDDLAKEKIRL 392
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 466 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 524
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 525 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 582
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 583 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 633
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 634 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 693
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 694 SWGSNDQ 700
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 404 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 452
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 453 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 508
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 509 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 556
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 557 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 616
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 617 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 654
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 481 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 539
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 540 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 598
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 599 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 656
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 657 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 696
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 537 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 596
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 597 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 655
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 656 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 698
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 591 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 650
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 651 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 702
>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Acyrthosiphon pisum]
Length = 4257
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 37/295 (12%)
Query: 44 GNGDYGRLGLGSLESRWRP----VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
G YGRLGLG+ ++ P + C + S K C G H+L L++TG VY+ G D
Sbjct: 398 GKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKG--CDG-HSLALSDTGEVYSWGDGD 454
Query: 100 FGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
+G+LG + + EP I G + K + +S GY HS+A+T DG+LY WG+ +G+LG
Sbjct: 455 YGKLGHGD-VATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGH 513
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESS 216
G + IPT V+ LS + A G ++A + G V S+G+G +G+LGHG
Sbjct: 514 GDCNPRF--IPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIR 571
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------RAVDKM 270
+ Y P+ I+ L K+K AAG S + G V+ +G + +
Sbjct: 572 L---------YKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNLGCGSSEIT 622
Query: 271 LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
LF P+++ L ++ G H LT +Y WGSN G G G
Sbjct: 623 LFS-------PAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQG 670
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 137/288 (47%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
G G+YGRLG G +S + SA + + ++ H+L LTETG V++ G DF
Sbjct: 3451 GEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGDF 3510
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG N L S V+Q++ G+ HS+ ++ DGE+Y++G +G+LGLG
Sbjct: 3511 GKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGH 3570
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
K PTK+ + K A G ++ + G V ++G G G+LG G + I
Sbjct: 3571 INK--KRPTKIVHKGFLNIKYIACGQNHTICI-GENVVWAFGEGEGGKLGIGSKKDI--- 3624
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVD--KMLFQEGNH 277
Y P+ I L G +K A G + + E+G +Y G D D +L+ E
Sbjct: 3625 ------YVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDATDVLYTE--- 3675
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I + +V G H VLT+ G ++ WG+N G LG G
Sbjct: 3676 KLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFG 3723
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 32/264 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G R+ P + + + +ACG HTL + G V++ G D G
Sbjct: 503 WGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNG 562
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG I +P +I GL+ ++ +++ G H S A+T GE++ WG+ SN LG G
Sbjct: 563 KLGHGNTIRL-YKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSN--LGCGSS 619
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P VE L ++G +A+T V +WG+ G G+ G G +S +
Sbjct: 620 EITLFS-PAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQGHSTSPVS- 677
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSA------------------CIDENGRVYIF 262
P + LEG ++ +AG HS CID + + +
Sbjct: 678 -------RPSKVINLEGKQINQISAGTSHSVAWTTLPPDRQTNVWHSPFCIDLHESTFKW 730
Query: 263 GDRAVDKMLFQEGNHARRPSLISK 286
+ ++K Q +H P+ I++
Sbjct: 731 LRQFIEKYCEQIESHESTPNDINE 754
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 130/291 (44%), Gaps = 33/291 (11%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG+ + G+ E P + + ++ + G T + GCV A G N +G
Sbjct: 346 MWGSNSSNQHAEGATEVTDIPRLVRSLS--DVQQVEAGQYCTFIIDTKGCVSACGKNSYG 403
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLG 158
+LG+ + + P RI + ++ Q+S+ HS A++ GE+Y WG G+LG G
Sbjct: 404 RLGLGNSSNQPV-PKRI-NINCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHG 461
Query: 159 K----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
K K+I P G + + G+ S AVT G++ +WG G GRLGHG
Sbjct: 462 DVATHKEPKLIQGP-----FIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGD- 515
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQ 273
+ P L+K L + V A G H+ AC + V+ FG + D
Sbjct: 516 --------CNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFG--SGDNGKLG 565
Query: 274 EGNHAR--RPSLISKL-PYSEEVVCGGYHTCV-LTSGGELYTWGSNEN-GC 319
GN R +P I L Y + V G H V LT GE++TWG N GC
Sbjct: 566 HGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSNLGC 616
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 109/245 (44%), Gaps = 34/245 (13%)
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLK------KEVVQISTGYHHSSAITVDGELYM 146
+++GLN+ EN ++L IS K ++++Q H + Y+
Sbjct: 3344 FSSGLNE-------ENDDHNLWSEAISNNKWTIEADQQIIQWFNTTPHDWQPYTKCDAYL 3396
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG NGQLG + I I + ++ + ++ G + +T G VLS G G
Sbjct: 3397 WGNGRNGQLG-DTAVGQCINIWSPIKIQNFKIAQRIVCGQNCTFVLTSQGTVLSCGEGNY 3455
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEG-----VKVKIAAAGFLHSACIDENGRVYI 261
GRLGHG S+ +I L+G V I + G HS + E G V+
Sbjct: 3456 GRLGHGHSDSLPNL---------TMISALQGFVITQVSTSIGSDG--HSLALTETGEVFS 3504
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENG 318
+GD K+ R+P LI L Y +V CG H+ VL+ GE+Y +GS E+G
Sbjct: 3505 WGDGDFGKLGHGNNERQRKPKLIESL-YDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHG 3563
Query: 319 CLGIG 323
LG+G
Sbjct: 3564 KLGLG 3568
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 104/215 (48%), Gaps = 36/215 (16%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V Q+ G + + I G + GKNS G+LGLG + + P+P ++ I ++
Sbjct: 374 DVQQVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQ--PVPKRININCKIKQVSSS 431
Query: 184 LGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVK 241
G + S+A++ G+V SWG G G+LGHG + + P+LI+ G ++
Sbjct: 432 KGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVA---------THKEPKLIQGPFIGKVIE 482
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR------RPSLISKLPYSEE--- 292
+ +AG+ HSA + +G++Y +G EG+H R P I L S
Sbjct: 483 LVSAGYRHSAAVTSDGQLYTWG----------EGDHGRLGHGDCNPRFIPTLVKSLSDMP 532
Query: 293 ---VVCGGYHTCVLT-SGGELYTWGSNENGCLGIG 323
V CG HT + G ++++GS +NG LG G
Sbjct: 533 VGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHG 567
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G + + P ++ F ++ ++ G H+ +T G +Y G D G
Sbjct: 450 WGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHG 509
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY-----HHSSAITVDGE-LYMWGKNSNGQL 155
+LG + P I L K + + GY H+ A + DG ++ +G NG+L
Sbjct: 510 RLGHGD-----CNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKL 564
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + P K+E L K+ A G SVA+T G+V +WG G + LG G
Sbjct: 565 GHGNTIR--LYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSN--LGCGSSE 620
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
L ++P ++++L + + G H + N VY +G
Sbjct: 621 ITL--------FSPAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAWG 660
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 121/250 (48%), Gaps = 22/250 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G+ E + +P + + + +ACG H+ L++ G VY G + G+
Sbjct: 3505 WGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGK 3564
Query: 103 LGISENIGYSLEPLRISGLKK---EVVQISTGYHHSSAITVDGELYMW--GKNSNGQLGL 157
LG+ +I P +I + K + I+ G +H+ I GE +W G+ G+LG+
Sbjct: 3565 LGLGGHINKK-RPTKI--VHKGFLNIKYIACGQNHTICI---GENVVWAFGEGEGGKLGI 3618
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G K K I +P ++ L+G K+A G ++ ++ G++ S G+ Q+++
Sbjct: 3619 GSK--KDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNL------QDATD 3670
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
+ + T + P I E +G V A G H + G V+ +G+ + F
Sbjct: 3671 VLY---TEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLP 3727
Query: 278 ARRPSLISKL 287
++P +I L
Sbjct: 3728 VQKPMIIQIL 3737
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 19/187 (10%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
E++MWG NS+ Q G A +V IP V LS + +Q G + + G V +
Sbjct: 342 SEVFMWGSNSSNQHAEG--ATEVTDIPRLVRSLSDV--QQVEAGQYCTFIIDTKGCVSAC 397
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL-HSACIDENGRVY 260
G GRLG G S+++ P+ I +K ++ G HS + + G VY
Sbjct: 398 GKNSYGRLGLGN---------SSNQPVPKRININCKIKQVSSSKGCDGHSLALSDTGEVY 448
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPY---SEEVVCGGY-HTCVLTSGGELYTWGSNE 316
+GD K+ + + P LI P+ E+V GY H+ +TS G+LYTWG +
Sbjct: 449 SWGDGDYGKLGHGDVATHKEPKLIQG-PFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGD 507
Query: 317 NGCLGIG 323
+G LG G
Sbjct: 508 HGRLGHG 514
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 147/330 (44%), Gaps = 30/330 (9%)
Query: 4 RSLTAMTKYY--LKQDIKLGSKLGICKRWISST--LQRRFAALWGNGDYGRLGLGSLESR 59
R +T Y L ++ G + KR+I LQ +WG+G+ G+LG S E +
Sbjct: 52 REAALVTDYRTELPEEESEGYDYHMEKRYIRENIELQGSHVFMWGDGENGKLGNQSEEIQ 111
Query: 60 WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----GYSLEP 115
P + AF +K A G HTLFL+ G V + G N +GQLG+ +++ EP
Sbjct: 112 HVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEP 171
Query: 116 LRISGLKK---------EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
+ L K +V I+ GY+HS A+ G+++ WG S G+LG+G A
Sbjct: 172 SKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANA--E 229
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P V L A G + A+T G V +WG G G+LGH E
Sbjct: 230 SPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKS---------VKEE 280
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
++PRL L + G H+ I +G++Y G ++ + P+L++
Sbjct: 281 FSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTG 340
Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
+ ++ G + LT+ G+++ +G+
Sbjct: 341 FANEKVIDIDAKGCRSIALTNTGKVFAFGN 370
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 135/279 (48%), Gaps = 23/279 (8%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G ++GRLGLG + PV + + +ACG H L LTE VYA G +G
Sbjct: 1668 GGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+S N LEP +S L ++ + G HS+A++ G+L+MWGKNSNGQLGLG +A
Sbjct: 1728 GVS-NTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSA 1786
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV--TGGGKVLSWGAGGSGRLGHGQESSILGF 220
PTK+ L G+ +LG S + + + G +G+LG LG
Sbjct: 1787 -AEDSPTKISNLDGVVM-DVSLGANHSAVLMQVTSPNLFTCGLNANGQLG-------LGD 1837
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG----- 275
S T + L+ ++ A+ G H+A + + G + +G+ ++ + G
Sbjct: 1838 FVDRSTLTA--VDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDI 1895
Query: 276 -NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
N + P++ + P +VVCG T V++ GELY G
Sbjct: 1896 ENPVQLPAICND-PMV-KVVCGQEVTIVVSEKGELYMAG 1932
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 127/278 (45%), Gaps = 15/278 (5%)
Query: 27 CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C RW + TL L WG G++G+LGL S+ P + A + + + CGG H+
Sbjct: 1278 CGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAA 1337
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSL----EPLRISGLKKEVVQISTGYHHSSAITVD 141
+ E+G + G N +GQLG + S + LR+ G +V G +H+ + V
Sbjct: 1338 ILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEG---KVRTAGLGANHTLVVMVA 1394
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
+++ G N +GQLGL + +P +E L+G Q A G + S+A++ G+V SW
Sbjct: 1395 NKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSW 1454
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G+LGH + L TP L + VK A G+ SA + G V+
Sbjct: 1455 GGSPFGQLGHETITDKLA-------PTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFT 1507
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+G+ ++ PSLI ++ CG H
Sbjct: 1508 WGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKH 1545
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 24/292 (8%)
Query: 43 WGNGDYGRLGLGSLES--------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
WG GD G+LG SLE+ + P +++ + ++ACG H + LT V +
Sbjct: 1237 WGAGDRGQLG--SLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLS 1294
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G +FGQLG+ N+ P + L + +I G HS+AI G++ +WGKN G
Sbjct: 1295 WGAGEFGQLGLDHNLSKGT-PQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYG 1353
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG G + P + L G + A LG ++ V KV + G+ G+LG
Sbjct: 1354 QLGHGDTKSCSAPRVNQYLRLEGK-VRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDD 1412
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S T + P I+EL G + AAG HS + G V+ +G ++ +
Sbjct: 1413 PS-------RTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHE 1465
Query: 274 EGNHARRPSLI---SKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P+ + K+P + + CG + +++ GE++TWG+ E+G LG
Sbjct: 1466 TITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELG 1517
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 135/292 (46%), Gaps = 15/292 (5%)
Query: 43 WGNGDYGRLGLG-----SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+G G +GRLG G S ES P K S+ +ACG T LT+TG VY G
Sbjct: 520 YGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGK 579
Query: 98 NDFGQLGISENIGYSL-EPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ G+LG+ ++ P + L VV QIS G +H++ T + ++WG N+ GQL
Sbjct: 580 SAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQL 639
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+ + +P P ++ L + A G ++ T G V+S G G G+LGHG
Sbjct: 640 GI-PHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYE 698
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S+ L T Y ++++ + +AG SA I GR++ +G + + L E
Sbjct: 699 SLTA-LSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWG-KGDEYQLGHES 756
Query: 276 N----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + R +K+ +V G H L G Y+WG+ G LG G
Sbjct: 757 SKNEAYPREVEFFAKIRVV-DVSIGDSHMLALDYSGLPYSWGNGSAGQLGHG 807
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 133/292 (45%), Gaps = 25/292 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G GRLG G P ++F ++ + +ACG H+L + G VYA G D G
Sbjct: 1184 WGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRG 1243
Query: 102 QLGISEN-----IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
QLG EN I Y+ P + LK+ ++ I+ G H+ +T + ++ WG GQL
Sbjct: 1244 QLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQL 1303
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
GL +K P V+ L G + G S A+ GK+L WG G+LGHG
Sbjct: 1304 GLDHNLSK--GTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHGDTK 1361
Query: 216 SILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S PR+ + LEG KV+ A G H+ + +V+ G ++
Sbjct: 1362 SC---------SAPRVNQYLRLEG-KVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLD 1411
Query: 274 EGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + + P I +L +V G H+ L+ GE+++WG + G LG
Sbjct: 1412 DPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLG 1463
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 17/205 (8%)
Query: 18 IKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKAL 76
I LG C S+ + + F +WG+ +G+LG+ + S P ++ + +++++
Sbjct: 612 ISLGRNHAAC----STDMHKFF--VWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSI 665
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV--------VQI 128
ACGG HTL T TG V + G GQLG + + + KK V V++
Sbjct: 666 ACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKV 725
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G S+AIT G L+ WGK QLG +++K P +VE + I ++G
Sbjct: 726 SAGKESSAAITNKGRLFTWGKGDEYQLG--HESSKNEAYPREVEFFAKIRVVDVSIGDSH 783
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQ 213
+A+ G SWG G +G+LGHG+
Sbjct: 784 MLALDYSGLPYSWGNGSAGQLGHGE 808
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 34/285 (11%)
Query: 44 GNGDYGRLGLGS-LESRWRPVVCSAFEK------------HSLKALACGGAHTLFLTETG 90
G+ YG+LG+G + SR PV + +K +++ +A G H+L L +TG
Sbjct: 148 GSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTG 207
Query: 91 CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+++ G +G+LGI + S +VV I+ G HH++AIT G+++ WGK
Sbjct: 208 KIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKG 267
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQ LG K+ K P L ++ G + ++ + G++ S GA G+LG
Sbjct: 268 LRGQ--LGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLG 325
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G +T P L+ KV A S + G+V+ FG+
Sbjct: 326 LGD---------ATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNET---- 372
Query: 271 LFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTW 312
E + R P ++ LP S+ ++ + ++ G+L+ W
Sbjct: 373 ---EPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRW 414
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 143/301 (47%), Gaps = 23/301 (7%)
Query: 31 ISSTLQRRFAAL--WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
S++ Q+R + WG G+LG+ L++ P + + S+ ++ + F+T+
Sbjct: 1601 FSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTD 1660
Query: 89 TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
+G +Y +G ++ G+LG+ ++ + P+ I L ++++++ G +H A+T + +Y W
Sbjct: 1661 SGSLYVSGGSEHGRLGLG-HMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAW 1719
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G G G+ + P ++ L+ G S A++ G + WG +G
Sbjct: 1720 GDGKWGNAGVSN--TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNG 1777
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE--NGRVYIFGDR 265
+LG G S+ +E +P I L+GV + + + G HSA + + + ++ G
Sbjct: 1778 QLGLGTTSA--------AEDSPTKISNLDGVVMDV-SLGANHSAVLMQVTSPNLFTCGLN 1828
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG 321
A ++ G+ R +L + + + CG HT ++ G+L TWG+ NG LG
Sbjct: 1829 ANGQLGL--GDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLG 1886
Query: 322 I 322
+
Sbjct: 1887 L 1887
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 26/247 (10%)
Query: 92 VYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQI-STGYHHSSAITVDGELYMWGK 149
V+ G + G+LG SE I + P + + +V++ + G H+ ++ DG + G
Sbjct: 92 VFMWGDGENGKLGNQSEEIQHV--PYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGS 149
Query: 150 NSNGQLGLGKKA-AKVIPI--PTKVECLSGIFTKQAAL--------GFEQSVAVTGGGKV 198
N GQLG+G ++ P+ P+K + L + +L G+ S+A+ GK+
Sbjct: 150 NVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKI 209
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
SWG+G G+LG G +++ +PR + L+ KV A G H+A I G
Sbjct: 210 FSWGSGSWGKLGIGSDANA---------ESPRFVASLQNSKVVHIACGAHHTAAITTVGD 260
Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNE 316
V+ +G ++ + P L + L ++++ CG HT V+ G+LY+ G+N
Sbjct: 261 VWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANT 320
Query: 317 NGCLGIG 323
+G LG+G
Sbjct: 321 HGQLGLG 327
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 15/238 (6%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
GCV+ G + GQLGI L S L +V IS S+ +T G LY+ G
Sbjct: 1610 GCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGG 1669
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
+ +G+LGLG A P P ++ L+ + + A G +A+T +V +WG G G
Sbjct: 1670 SEHGRLGLGHMAPA--PTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G + +L P+ + L + AG HSA + + G ++++G + +
Sbjct: 1728 GVSNTNDVL---------EPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQ 1778
Query: 270 MLFQEGNHARR-PSLISKLP-YSEEVVCGGYHTCVL--TSGGELYTWGSNENGCLGIG 323
+ + A P+ IS L +V G H+ VL + L+T G N NG LG+G
Sbjct: 1779 LGLGTTSAAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLG 1836
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 120/291 (41%), Gaps = 26/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT---LFLTETGCVYATGLND 99
WGNG+ G LG + P + F + + +ACG H +F + TG ++
Sbjct: 1508 WGNGESGELGHAPKVLTYAPSLIKDFSE--VVQIACGFKHMAGIVFKPRMKTIELTGSSN 1565
Query: 100 FGQLGISENIGYSLEPLRISG----LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G S S+ +SG T +S G +++WG+++ GQL
Sbjct: 1566 IGD--NSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQL 1623
Query: 156 GL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
G+ G +AA+ P+ ++ L + + S VT G + G GRLG
Sbjct: 1624 GIRGLQAARS---PSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLG---- 1676
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
LG + TP I+ L VK+ A G H + E RVY +GD
Sbjct: 1677 ---LGHMAPAP--TPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSN 1731
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
N P +S L V GG+H+ L+ G+L+ WG N NG LG+G
Sbjct: 1732 TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLG 1782
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 112/242 (46%), Gaps = 23/242 (9%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGK 149
+Y G G+LG + GYS P I+ ++V+++ G HS A + DG +Y WG
Sbjct: 1181 IYTWGCGVNGRLGHGFHTGYST-PQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGA 1239
Query: 150 NSNGQLGLGKKAAKVIPI-----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
GQLG + + I P V L F A G ++ +T +VLSWGAG
Sbjct: 1240 GDRGQLG-SLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAG 1298
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEG-VKVKIAAAGFLHSACIDENGRVYIFG 263
G+ LG + S+ TP+++K L+G KI G+ HSA I E+G++ ++G
Sbjct: 1299 EFGQ---------LGLDHNLSKGTPQMVKALDGRAPCKILCGGW-HSAAILESGKILLWG 1348
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY---HTCVLTSGGELYTWGSNENGCL 320
++ + P + L +V G HT V+ +++ GSN +G L
Sbjct: 1349 KNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQL 1408
Query: 321 GI 322
G+
Sbjct: 1409 GL 1410
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 105/249 (42%), Gaps = 27/249 (10%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLE----PLRISGLKK-EVVQISTGYHHSSAITVDGEL 144
G +Y G FG+LG S E P RI L K VV I+ G ++A+T G++
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y WGK++ G+LGLG I +P V+ LS Q +LG + T K WG+
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSN 634
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
G+LG SS + P I L ++ A G H+ G V G
Sbjct: 635 TFGQLGIPHISSYMP--------DPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVV------------CGGYHTCVLTSGGELYTW 312
++ G++ +L LPY +++V G + +T+ G L+TW
Sbjct: 687 GWHGQL--GHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTW 744
Query: 313 GSNENGCLG 321
G + LG
Sbjct: 745 GKGDEYQLG 753
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
Query: 141 DGELYMWGKNSNGQLGLG---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
DG +Y +GK G+LG G ++ + + P ++E L+ + A G + + A+T GK
Sbjct: 514 DGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGK 573
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V +WG G+LG LG + + P+L+++L V + G H+AC +
Sbjct: 574 VYTWGKSAQGKLG-------LGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMH 626
Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
+ +++G ++ + ++ P I+ L + + CGG+HT + T+ G + + G
Sbjct: 627 KFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686
Query: 315 NENGCLGIG 323
+G LG G
Sbjct: 687 GWHGQLGHG 695
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 22/227 (9%)
Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE--LYMWGKNSNGQLGLG-----KK 160
NIG L+ L KK QI + + ++GE +Y WG NG+LG G
Sbjct: 1143 NIGRILQCLVRYSEKKHFEQIRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYST 1202
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
++ P+ + + + A G E S+A + G V +WGAG G+LG S+ F
Sbjct: 1203 PQEITSFPSNTKIV------EVACGCEHSLARSFDGGVYAWGAGDRGQLG-----SLENF 1251
Query: 221 --LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
++ + P+ + L+ + A G H+ + +V +G ++
Sbjct: 1252 DCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSK 1311
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ L +++CGG+H+ + G++ WG N G LG G
Sbjct: 1312 GTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHG 1358
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 127/337 (37%), Gaps = 70/337 (20%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG------- 96
G +G+LGLG R P + + F + + G ++ LT TG V+A G
Sbjct: 317 GANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHL 376
Query: 97 ----------------------------LNDFGQLGISENIGYSLEPLRI---SGLKKEV 125
++D GQL E R+ K V
Sbjct: 377 NRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFSSEEESSRMLESFHAIKGV 436
Query: 126 VQISTGYHHSSAITVDGEL----YMWGKNSNGQLGLGKKAA--------KVIP-IPTKVE 172
V++ G++H A+ E+ M +N + A K++P + T E
Sbjct: 437 VRMFCGHNHM-AVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNTE 495
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS-TSEYTPRL 231
L T Q S + G G + ++G G GRLGHG E + RS S P+
Sbjct: 496 YLDEFATVQV----RDSPSREGDGYIYTYGKGVFGRLGHGVE-----YTRSEESVKHPKR 546
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--RPSLISKLPY 289
I+ L + V A G +A + + G+VY +G A K+ G P L+ L
Sbjct: 547 IETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDL-- 604
Query: 290 SEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGI 322
S VVC G H T + + WGSN G LGI
Sbjct: 605 SSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGI 641
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 131/334 (39%), Gaps = 62/334 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G+LG S++ + P + ++ K + + CG HTL + +G +Y+ G N GQ
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + + P ++G E V+ I S A+T G+++ +G + L +
Sbjct: 324 LGLGDATDRII-PTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNRIPRF 382
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW----GAGGSGRL-------- 209
+P K + + + + A F A++ G++ W S R+
Sbjct: 383 VAGLP---KSDLIIAV-ARTAHFDF----AISDTGQLFRWRPFSSEEESSRMLESFHAIK 434
Query: 210 -------GH-----------GQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHS 250
GH G +++ +STS + LE KI A ++
Sbjct: 435 GVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNT 494
Query: 251 ACIDE--------------NGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYSE 291
+DE +G +Y +G ++ + + P I L
Sbjct: 495 EYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMS 554
Query: 292 EV--VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V CG T LT G++YTWG + G LG+G
Sbjct: 555 VVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLG 588
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 30/313 (9%)
Query: 2 LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
+ R +TA++ Y +K K+ G + ++ T+ + + WG GD G+LG S + +
Sbjct: 3039 IPRQITALSNYVVK---KVAVHSG-GRHAMALTVDGKIFS-WGEGDDGKLGHFSRMNCDK 3093
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P + A + ++ +ACG +H+ +T +G +Y GL ++G+LG +N L+P + L
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVL 3152
Query: 122 K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
V+Q++ G + A+T +G ++ WG G+LG G ++ IP +E L+G
Sbjct: 3153 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQG 3210
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
Q G + S+A+T G V +WG G RLGHG + + P++++ L G
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV---------RKPQVVEGLRGK 3261
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSE--E 292
K+ A G LH + + G+VY +GD Q+GN R+P+L+ L +
Sbjct: 3262 KIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTTVNRKPTLVQGLEGQKITR 3317
Query: 293 VVCGGYHTCVLTS 305
V CG H+ T+
Sbjct: 3318 VACGSSHSVAWTT 3330
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+ + + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4242
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4243 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L++ L + V CG HT
Sbjct: 4296 RPRLVAALQGKKINRVACGSAHT 4318
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G +++ G D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3080
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3296
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 119/238 (50%), Gaps = 16/238 (6%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ GLND QLG + + + VVQ++ G A+TV+G++Y G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
NG+LGLG + V PIP ++ LS K+ A+ G ++A+T GK+ SWG G G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3083
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GH F R + PRLI+ L+ +++ A G HSA I +G +Y +G +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
+ + +P ++ L +V CG T LT G +++WG + G LG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV I+ G HS+ IT G+L+ WGK G+LG G ++ P VE
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L + V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4196 IDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKLISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++YTWG +N LG G
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG 693
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4187 SDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4237
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 25/256 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
+ P+L++ L+G KV AAG H + E+ V+ +G + D +
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 271 LFQEGNHARRPSLISK 286
+ A P L +K
Sbjct: 747 RITKPEPAALPGLDTK 762
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3232 TWGKGDYFRLGHG 3244
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+++ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3067 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3127 WGLGEYGRLGHG 3138
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G ++ +G
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4226 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4285
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K++ +++ G H+ A
Sbjct: 4286 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4320
>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 28/250 (11%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSS 136
G H L L+ G + E YS++ LR + +K+++QI+ G +HS
Sbjct: 105 GAEHMLILSSDGKPF-------------EYDNYSMKHLRFESILQEKKIIQITCGDYHSL 151
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A++ GEL+ WG+N +GQLG+G+K P VE L+G+ Q + G S+A++ G
Sbjct: 152 ALSKGGELFAWGQNLHGQLGVGRKFPSTT-TPQIVEHLAGVPLAQISAGEAHSMALSMSG 210
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+ SWG G+LG G + S+ P LI+ L+ KV+ A G HSA + ++
Sbjct: 211 NIYSWGKNECGQLGLGH---------TESKDDPSLIEGLDNQKVEFVACGGSHSALLTQD 261
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSG-GELYTWG 313
G ++ FG ++ + RP L+++L ++ CG +HT S G+++++G
Sbjct: 262 GLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFG 321
Query: 314 SNENGCLGIG 323
S ++G LG G
Sbjct: 322 SGKDGQLGNG 331
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 19/264 (7%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGLG +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK--DDPSLIEGLDNQKVEFVAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELVGYRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT--- 300
G H+ A + + G+V+ FG D L G + L K+ SEE+ + +
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGS-GKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKE 360
Query: 301 CVLTSGGE--LYTWGSNENGCLGI 322
++ +GG + W EN + +
Sbjct: 361 LIMIAGGNQSILLWIKKENSYVNL 384
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGLG ES+ P + + ++ +ACGG+H+ LT+ G ++ G GQ
Sbjct: 215 WGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G +GQLG G
Sbjct: 275 LG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 161 AAKVIPIPTKV 171
+++P+P KV
Sbjct: 334 RDQLMPLPVKV 344
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 495 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 553
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 554 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 611
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 612 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 662
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 663 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 722
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 723 SWGSNDQ 729
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 481
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 482 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 537
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 538 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 585
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 586 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 645
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 646 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 683
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 510 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 568
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 569 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 627
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 628 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 685
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 686 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 725
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 566 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 625
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 626 GKLGRGGSDGCKT-PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 684
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 685 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 727
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 679
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 680 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 731
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 2296 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2355
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 2356 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2413
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 2414 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2470
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 2471 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 2519
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 2520 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2551
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 18/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 3290 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 3349
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV ++ +G + +T D ++ WG G+LG G
Sbjct: 3350 LGHSDSED-QLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 3407
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 3408 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3464
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G Y +GD ++ N +
Sbjct: 3465 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGTTNAIQ 3516
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 3517 RPRLVAALQGKKVNRVACGSAHT 3539
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 2242 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2301
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 2302 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2360
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 2361 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2414
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 2415 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2469
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 2470 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG 2517
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 135/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3184 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 3241
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 3242 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3299
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 3300 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3354
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L+ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 3355 ------SEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3408
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 3409 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3459
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2224 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2283
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 2284 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2341
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 2342 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2392
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 2393 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2452
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 2453 TWGKGDYFRLGHG 2465
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 119/274 (43%), Gaps = 20/274 (7%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 3250 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3308
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P V+
Sbjct: 3309 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVDA 3366
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 3367 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3417
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 3418 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3477
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T G YTWG N+ G LG G
Sbjct: 3478 VIAIATGSLHCVCCTEDGS-YTWGDNDEGQLGDG 3510
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2178 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2235
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 2289
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 2290 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2349
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 2350 LGEYGRLGHG 2359
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3179 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 3237
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 3238 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3297
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 3298 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3348
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L +V CG T LT +++WG + G LG G
Sbjct: 3349 RLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 3407
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 3499 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3540
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3177 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 3236
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 3237 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 3296
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 3297 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 3351
>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
Length = 1024
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 28/250 (11%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSS 136
G H L L+ G + E YS++ LR + +K+++QI+ G +HS
Sbjct: 105 GAEHMLILSSDGKPF-------------EYDNYSMKHLRFESILQEKKIIQITCGDYHSL 151
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A++ GEL+ WG+N +GQLG+G+K P VE L+G+ Q + G S+A++ G
Sbjct: 152 ALSKGGELFAWGQNLHGQLGVGRKFPSTT-TPQIVEHLAGVPLAQISAGEAHSMALSMSG 210
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+ SWG G+LG G + S+ P LI+ L+ KV+ A G HSA + ++
Sbjct: 211 NIYSWGKNECGQLGLGH---------TESKDDPSLIEGLDNQKVEFVACGGSHSALLTQD 261
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSG-GELYTWG 313
G ++ FG ++ + RP L+++L ++ CG +HT S G+++++G
Sbjct: 262 GLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFG 321
Query: 314 SNENGCLGIG 323
S ++G LG G
Sbjct: 322 SGKDGQLGNG 331
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 19/264 (7%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGLG +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK--DDPSLIEGLDNQKVEFVAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELVGYRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT--- 300
G H+ A + + G+V+ FG D L G + L K+ SEE+ + +
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGS-GKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKE 360
Query: 301 CVLTSGGE--LYTWGSNENGCLGI 322
++ +GG + W EN + +
Sbjct: 361 LIMIAGGNQSILLWIKKENSYVNL 384
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGLG ES+ P + + ++ +ACGG+H+ LT+ G ++ G GQ
Sbjct: 215 WGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G +GQLG G
Sbjct: 275 LG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 161 AAKVIPIPTKV 171
+++P+P KV
Sbjct: 334 RDQLMPLPVKV 344
>gi|226311363|ref|YP_002771257.1| hypothetical protein BBR47_17760 [Brevibacillus brevis NBRC 100599]
gi|226094311|dbj|BAH42753.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 323
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG G+ E R PV+ + +A G +H+L L G V+ G N GQ
Sbjct: 54 WGNNGNGQLGDGTFEQRNEPVLVKGLT--GVTKIAAGSSHSLALKSDGTVWGWGWNGKGQ 111
Query: 103 LGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + ++ +P++ GL +V+ I+ G H A+ DG +++WG NS
Sbjct: 112 LGNNTTTSSNISKPVQAVGLT-DVIDIAAGDAHGLALKKDGTVWIWGSNSTN-------- 162
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+PT+VE L+ + + A ++ V G V SWG G G+LG
Sbjct: 163 -----LPTRVESLTDV--RAIAAAGAHNLTVKKDGTVWSWGWNGYGQLG---------IN 206
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQEGNH 277
+ S+ P + L + AAGF HS +D G+VY +G D Q
Sbjct: 207 NTGSKDVPTKVSNLS--NIVSVAAGFHHSLALDVEGKVYAWGGNTYGQVGDGTTTQRNAP 264
Query: 278 ARRPSLISKLPYSEEVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
PSL+ + E+ G Y HT L G +Y WG +G LG G
Sbjct: 265 VEVPSLVDIV----EIASGSYSYHTLALKKDGTVYAWGLGTSGQLGNG 308
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 112/258 (43%), Gaps = 26/258 (10%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV 125
+ F ++ + A GG+H+L L G V+A G N GQLG EP+ + GL V
Sbjct: 25 TTFAAGNVISSAAGGSHSLILRSDGTVWAWGNNGNGQLG-DGTFEQRNEPVLVKGLTG-V 82
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+I+ G HS A+ DG ++ WG N GQLG + I P + L+ + A G
Sbjct: 83 TKIAAGSSHSLALKSDGTVWGWGWNGKGQLGNNTTTSSNISKPVQAVGLTDVI--DIAAG 140
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+A+ G V WG S S P ++ L V+ IAAA
Sbjct: 141 DAHGLALKKDGTVWIWG--------------------SNSTNLPTRVESLTDVRA-IAAA 179
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
G H+ + ++G V+ +G ++ P+ +S L V G +H+ L
Sbjct: 180 G-AHNLTVKKDGTVWSWGWNGYGQLGINNTGSKDVPTKVSNLSNIVSVAAGFHHSLALDV 238
Query: 306 GGELYTWGSNENGCLGIG 323
G++Y WG N G +G G
Sbjct: 239 EGKVYAWGGNTYGQVGDG 256
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG+ + S+ P S ++ ++A G H+L L G VYA G N +GQ
Sbjct: 195 WGWNGYGQLGINNTGSKDVPTKVSNLS--NIVSVAAGFHHSLALDVEGKVYAWGGNTYGQ 252
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
+G + P+ + L ++V+I++G + H+ A+ DG +Y WG ++GQLG G
Sbjct: 253 VGDGTTTQRN-APVEVPSLV-DIVEIASGSYSYHTLALKKDGTVYAWGLGTSGQLGNGTT 310
Query: 161 AAKVIPIPTKV 171
IPI +
Sbjct: 311 TNSNIPIQVNI 321
>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
Length = 1009
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 145/294 (49%), Gaps = 31/294 (10%)
Query: 36 QRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
+RR AAL G + +L GS +R +P +K + ++ G H L L+ G +
Sbjct: 47 RRRLAALERGGAGFHQLPAGSDGAR-KPKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPF- 104
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
YS+E R + +K ++QI+ G +HS A++ GEL+ WG+N +
Sbjct: 105 -------------EYKYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLD 151
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG+G+ A P VE LSG+ Q + G S+A++ G V SWG G+LG G
Sbjct: 152 GQLGVGRIFAST-STPEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLG 210
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
+ ++ +P I+ L+ KV+ A G H+A + ++G V+ FGD ++
Sbjct: 211 H---------TYNKDSPSCIETLDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGH 261
Query: 273 QEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSG-GELYTWGSNENGCLGIG 323
+ RP L++ L ++ CG HT S G+++++GS + G LG G
Sbjct: 262 NSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNG 315
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LGLG ++ P + ++ LACGG HT LT++G V+ G +GQ
Sbjct: 199 WGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQ 258
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++GL V QI+ G H+ A D G+++ +G GQLG G
Sbjct: 259 LG-HNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGT 317
Query: 161 AAKVIPIP 168
++IP P
Sbjct: 318 RNQLIPRP 325
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 495 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 553
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 554 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 611
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 612 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 662
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 663 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 722
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 723 SWGSNDQ 729
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 481
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 482 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 537
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 538 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 585
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 586 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 645
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 646 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 683
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 510 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 568
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 569 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 627
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 628 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 685
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 686 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 725
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 566 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 625
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 626 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 684
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 685 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 727
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 679
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 680 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 731
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3003 WGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGR 3062
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L+ VVQ++ G + +T +G ++ WG G+LG G
Sbjct: 3063 LGHGDNCT-QLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG- 3120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +VE L+ + Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3121 -GSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHV-- 3177
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P I+ L G KV A G LH + ++G+VY +GD D GN
Sbjct: 3178 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDN--DHGQQGSGNTVV 3228
Query: 279 -RRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3229 NKKPNLVLGLDGVFVNRVACGSSHS 3253
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ +S RP + A + +ACG AH+ +T G V G +G+
Sbjct: 4048 WGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGR 4107
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4108 LGHGDSED-QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4165
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4166 -GSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHV-- 4222
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH ++G V+ +GD ++ +
Sbjct: 4223 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQ 4275
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L+ L + +V+CG HT L++
Sbjct: 4276 RPRLVQSLQGKHIVKVICGSAHTLALST 4303
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 129/287 (44%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H + LT G V++ G + G
Sbjct: 2950 GEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3009
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ K V I+ G HS+AIT GELY WG G+LG G
Sbjct: 3010 KLGHGNRLTLE-KPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3068
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L G Q A G Q++ +T G V SWG G G+LG G
Sbjct: 3069 CTQL--KPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGG----- 3121
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S P ++ L V V G S + ++G V+ +G ++ H
Sbjct: 3122 ----SEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHV 3177
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P+ I L + V G H +T G++Y WG N++G G G
Sbjct: 3178 RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG 3224
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 25/292 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P S + LK + GG+ +LF+ ++ G +YA G
Sbjct: 2896 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 2952
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ N P ++ L + VV+ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 2953 TNGRLGLGHNNNVP-TPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3011
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3012 GHGNRL--TLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3067
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
+ ++ P+L+ L+G +V A G + C+ E G V+ +GD K+
Sbjct: 3068 -------NCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3120
Query: 274 EGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +L ++ CG + LT GE++TWG + LG G
Sbjct: 3121 GSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHG 3172
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 140/290 (48%), Gaps = 23/290 (7%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A +A GG TL+ +T G +YATG
Sbjct: 3942 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 3999
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LGI S P + L+ +++ +++G H A++ DGE++ WG+ +G+LG
Sbjct: 4000 GRLGIGGTDSVS-APTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4058
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E LSGI A G S +T G VL+WG G GRLGHG
Sbjct: 4059 GNRDS--YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD---- 4112
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4113 -----SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4167
Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4168 DGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG 4217
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLG G S+ P + + + + CG +++ +T G ++ G +G+
Sbjct: 592 WGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGR 651
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N L P ++ LK +VV ++ +G HS +T +G L+ WG G+LG G
Sbjct: 652 LG-HGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGS 710
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
PIP +++ L + + G + SVA++ G + +WG G GRLGHG
Sbjct: 711 CNGS--PIPVQIDTLVNV--SRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGN------ 760
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S P+L++ LEG K+ A G H + +G +Y +G
Sbjct: 761 ---SEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWG 801
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 115/247 (46%), Gaps = 19/247 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH 133
A C G H + L+ V++ G D G+LG + + P I GL +K+V I G
Sbjct: 572 AAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKE-HPTMIVGLHEKQVCGIYCGAS 630
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
+S+AIT+ GEL+ WG+ + G+LG G K+ +PT+V+ L ALG S+
Sbjct: 631 YSAAITIAGELFTWGRGTYGRLGHGNSDDKL--VPTQVQALKSYKVVDVALGSGDAHSMC 688
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
VT G + +WG G G+LG+G P I L V V +G S
Sbjct: 689 VTDNGLLFAWGDGDFGKLGNGS---------CNGSPIPVQIDTL--VNVSRIYSGSQFSV 737
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ +G +Y +G ++ H+ P L+ L + +V G H LTS GEL
Sbjct: 738 ALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGEL 797
Query: 310 YTWGSNE 316
Y WG N+
Sbjct: 798 YGWGRND 804
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 118/248 (47%), Gaps = 37/248 (14%)
Query: 92 VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
V GLND QLG ++ L+P+ I+G K + +S D
Sbjct: 2894 VLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQ----------D 2943
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G+ +NG+LGLG +P P +V L+ K+ A+ G + ++A+T GKV
Sbjct: 2944 GKLYACGEGTNGRLGLGHN--NNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVF 3001
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G+LGHG R T E P+LI+ L +V+ A G HSA I +G +
Sbjct: 3002 SWGEGEDGKLGHGN--------RLTLE-KPKLIESLRTKRVRDIACGSSHSAAITSSGEL 3052
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
Y +G ++ + +P L++ L +V CG T LT G +++WG
Sbjct: 3053 YTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDG 3112
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 3113 DFGKLGRG 3120
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 111/259 (42%), Gaps = 32/259 (12%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTG 131
++ +AC + LT G V++ N SENI P GL+ VVQI+
Sbjct: 525 VRQVACTENNIYILTTGGQVFSLHSNS------SENIA----PKAFEGLEGVHVVQIAAH 574
Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA---LGF 186
H ++ E++ WG G+LG G +K P + G+ KQ G
Sbjct: 575 CEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPT-----MIVGLHEKQVCGIYCGA 629
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA-- 244
S A+T G++ +WG G GRLGHG S + P ++ L+ KV A
Sbjct: 630 SYSAAITIAGELFTWGRGTYGRLGHGN---------SDDKLVPTQVQALKSYKVVDVALG 680
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
+G HS C+ +NG ++ +GD K+ N + P I L + G + L+
Sbjct: 681 SGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVNVSRIYSGSQFSVALS 740
Query: 305 SGGELYTWGSNENGCLGIG 323
G LYTWG G LG G
Sbjct: 741 CDGTLYTWGKGHGGRLGHG 759
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT++G V+ G D+ +
Sbjct: 3109 WGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYR 3168
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +P I GL+ K+V+ ++ G H A+T G++Y WG N +GQ G G
Sbjct: 3169 LGHGTD-QHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTV 3227
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V P V L G+F + A G SVA
Sbjct: 3228 --VNKKPNLVLGLDGVFVNRVACGSSHSVA 3255
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 129 STGYHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
S+ Y ++ + ++ +WG N QLG G K +KV +PT LS + A G +
Sbjct: 2878 SSNYADDQSLNEISSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHIAGGSK 2935
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--A 245
V+ GK+ + G G +GRLG G +++ TPR + L VK A +
Sbjct: 2936 SLFIVSQDGKLYACGEGTNGRLGLGHNNNV---------PTPRQVPILNQYVVKKVAVHS 2986
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
G H+ + +G+V+ +G+ K+ +P LI L ++ CG H+ +
Sbjct: 2987 GGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAI 3046
Query: 304 TSGGELYTWGSNENGCLGIG 323
TS GELYTWG E G LG G
Sbjct: 3047 TSSGELYTWGLGEYGRLGHG 3066
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 93/237 (39%), Gaps = 67/237 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAKV-IPIP---------------------------------- 168
++ WG N GQLG G +++ +P P
Sbjct: 3939 IFGWGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 3997
Query: 169 ----------------TKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLG 210
T VE L + K+ A+ G + +A++ G+V SWG G G+LG
Sbjct: 3998 AGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4057
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG S + R P+LI+ L G+ V A G HSACI G V +G ++
Sbjct: 4058 HGNRDS---YDR------PKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRL 4108
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ +P L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4109 GHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4165
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 96/246 (39%), Gaps = 68/246 (27%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + + P A + + + AL G AH++ +T+ G ++A G DF
Sbjct: 644 WGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDF 703
Query: 101 GQLG------------------ISE-------------------------------NIGY 111
G+LG +S N +
Sbjct: 704 GKLGNGSCNGSPIPVQIDTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEH 763
Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL-GLGKKAAKVIPIPT 169
S P + L+ K++ ++ G H A+T GELY WG+N Q+ G +I P
Sbjct: 764 SNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSGVSRDPIIHSP- 822
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
I T L S G + + W S LG +S + F+ SE+T
Sbjct: 823 -------ILTTPPTLRI--SGMTCGAAQSIVWCH--SSTLG---VASKIPFVVDLSEHTF 868
Query: 230 RLIKEL 235
R++ +L
Sbjct: 869 RMLDQL 874
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 150/328 (45%), Gaps = 31/328 (9%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L C R ++ T ++ WG GRLG G+ RP + +
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309
Query: 73 LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
+ ++CG HT +T +G ++ G + G LG + Y L P ++SG + +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G HS+ T G+LY +G + G LG G + + + P +VE LSG T + A G
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426
Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ TG K+ +WG G RLGHG + L P+ ++ L
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRL---------VPKCVQALLEY 477
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVC 295
A G + + +GRV+ G + + L + ++P L+ SE E+ C
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSS-NGQLGNPKSDGKQPCLVQDRLASELVEEISC 536
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H VLTS E+YTWG NG LG G
Sbjct: 537 GASHVTVLTSRSEVYTWGMGANGRLGHG 564
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E R P A +++ LACG T+ L +G V+ G + GQ
Sbjct: 449 WGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQ 508
Query: 103 LGISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG ++ G +P + L E+V +IS G H + +T E+Y WG +NG+LG G
Sbjct: 509 LGNPKSDGK--QPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGD- 565
Query: 161 AAKVIPIPTKVECLSGIFTKQAALG 185
K P VE L K + G
Sbjct: 566 -LKDRKKPCLVEALKDRHVKSISCG 589
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ S+G V+ IP +E + Q A G T
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG ++ I P+L++ L V + + G H+ +
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
+G ++ +GD + + L G P +S +V+ CG +H+ + TS G+LY
Sbjct: 326 SGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLY 385
Query: 311 TWGSNENGCLGIG 323
T+G G LG G
Sbjct: 386 TFGDGTFGVLGHG 398
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
WG G GRLG G L+ R +P + A + +K+++CG T
Sbjct: 553 WGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFT 593
>gi|418670270|ref|ZP_13231642.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|410754041|gb|EKR15698.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
Length = 506
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 131 LSAGGAHSGFLIN-GELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 188
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 189 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 247 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYIWGKNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 361 ALTSDGKIYSWGLNASGQLGIG 382
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 202 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 318
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
KN G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 319 KNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 429 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP-TKVECLSGIFTKQAAL 184
++S G HS + ++GELY G+N+ GQLG G I KV+ + IF+ +
Sbjct: 129 TKLSAGGAHSGFL-INGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIRDIFS----I 183
Query: 185 GFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
F Q S+A++ G+V +WGA G+LG G ++ R++ + E+ G+ +
Sbjct: 184 HFNQNNSMAISQNGRVYTWGANSKGQLGIGNNNTDPA--RASDPGNRQPPTEIPGINDAV 241
Query: 243 AAA-GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-----PSLISKLPYSEEVVCG 296
A GF H+ + +G V FG V ++ E N R P + +L +V+ G
Sbjct: 242 MGAYGFNHALVLKSDGTVVAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRNVIQVIAG 301
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
H+ LT GE+Y WG N+ G LG G
Sbjct: 302 SEHSAALTENGEVYIWGKNQYGNLGNG 328
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 316 IWGKNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + + G+VY +GD Q+GN
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L+ G V++ G D G+LG + + EP IS L K VV I+ G +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ + G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + + G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H + LT G V++ G D
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3296
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 126/264 (47%), Gaps = 18/264 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G ++ G +G+
Sbjct: 4068 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGR 4127
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4128 LGHGDSED-QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4185
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS-GRLGHGQESSIL 218
+ +P K++ L+G+ + G + SVA+T G V +W RLGHG + +
Sbjct: 4186 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHV- 4243
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
PR ++ L+G KV A G LH C E+G VY +GD ++ N
Sbjct: 4244 --------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAI 4295
Query: 279 RRPSLISKLPYSE--EVVCGGYHT 300
+RP L++ L + V CG HT
Sbjct: 4296 QRPRLVAALQGKKINRVACGSAHT 4319
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N S+ +G P + L
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A++ +GE++ WG G+LG G +P+ P + LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S + P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV + +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++YTWG +N LG G
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG 693
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 122/275 (44%), Gaps = 20/275 (7%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ IT G+L+ WGK G+LG G ++ P VE
Sbjct: 4087 PRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-RAVDKMLFQEGNHARRPSLISKLPYS 290
I L G+ V G S + ++G VY + R ++ +H RRP + L
Sbjct: 4196 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGK 4255
Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + G H T GE+YTWG N+ G LG G
Sbjct: 4256 KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4290
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P + SA KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ +S +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 132/280 (47%), Gaps = 25/280 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S +T G + +WG G GRLGHG
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTW 312
+ + P I L +V CG + LT G +YTW
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTW 4226
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3232 TWGKGDYFRLGHG 3244
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GKV + G +GRLG G S + PR I L VK A +G H+ +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ + +P LI L ++ CG H+ +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3127 WGLGEYGRLGHG 3138
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E + P++ + + + ++CG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ ++V++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSACI G ++ +G
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYG 4126
Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4185
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GLK K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
WG+ D G+LG G+ + RP + +A + + +ACG AHTL
Sbjct: 4279 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4320
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 67/177 (37%), Gaps = 47/177 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4074
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
K+ + RP +I L E +V GG H+ +T+ G+L+TWG G LG G
Sbjct: 4075 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHG 4131
>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
str. Lupac 08]
Length = 710
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 128/292 (43%), Gaps = 35/292 (11%)
Query: 43 WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG YG LG+G+ L+ + PV ++ +A G H+L LT TG V A G N +
Sbjct: 68 WGRDGYGALGVGTATLDDKLSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYY 127
Query: 101 GQLG-------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G LG ++N Y + + V ++ +S A+T G + WG N G
Sbjct: 128 GVLGNGTKTDNSAQNDSYVPAAVHLPA-GTTVTSVAASSTYSLALTATGTVLAWGNNDQG 186
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG G +P+P + + I AA +A+T G VL+WG+ GSG+LG+G
Sbjct: 187 QLGNGTNTDSYLPVPLALPAATTITAIAAA--TNHGLALTSNGTVLAWGSNGSGQLGNGN 244
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV--DKML 271
+T+ TP + G + AA HS + G V +G V ++
Sbjct: 245 ---------TTNSNTPVTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQDTVLPIPIV 295
Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
F G V G H+ LTS G+++TWG+N G LG G
Sbjct: 296 FPAGITI------------TAVASGNDHSLALTSTGKVFTWGANYFGSLGNG 335
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ + PV + ++ A+A G+H++ LT TG V G +
Sbjct: 232 WGSNGSGQLGNGNTTNSNTPVTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQDTVLP 291
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+ I G + + +++G HS A+T G+++ WG N G LG G A
Sbjct: 292 IPIVFPAGIT------------ITAVASGNDHSLALTSTGKVFTWGANYFGSLGNGTFAN 339
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+P V + I A G QS+A+T GK+L+WG G++G+G + G
Sbjct: 340 SSVPVPASVPTDTTI--TAIAGGNAQSLALTSTGKLLAWGRNNYGQVGNGTRT---GSWP 394
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
P + K+ A G+ HS +
Sbjct: 395 GMGVSVPVPVSLAADTKITTMAGGYYHSLAV 425
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G LG G+ + PV S ++ A+A G A +L LT TG + A G N++GQ
Sbjct: 324 WGANYFGSLGNGTFANSSVPVPASVPTDTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQ 383
Query: 103 LGIS------ENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVD 141
+G +G S+ P+ +S ++ ++ GY+HS A+ +
Sbjct: 384 VGNGTRTGSWPGMGVSV-PVPVSLAADTKITTMAGGYYHSLAVAAE 428
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 145/307 (47%), Gaps = 40/307 (13%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-- 157
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 158 ------GKKAAKVIPIPTKV---EC------LSGIFTKQAALGFEQSVAVTG-----GGK 197
+ + +P+ + EC S + T + L + +A +G +
Sbjct: 121 SEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAVSASE 180
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
V WG G+LG G + + +P+LIK L G+ AAG HS + +G
Sbjct: 181 VFCWGQNKYGQLGLG--------IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG 232
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGS 314
++ +G ++ + N P L+ L S+++V CG HT LT G ++T+G+
Sbjct: 233 AIFGWGRNKFGQLGLNDENDRYVPYLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGA 291
Query: 315 NENGCLG 321
G LG
Sbjct: 292 GGYGQLG 298
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 136/307 (44%), Gaps = 39/307 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GI----------SENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVD----------- 141
G+ ++I ++ +RI KK + S S + D
Sbjct: 117 GLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAV 176
Query: 142 --GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
E++ WG+N GQLGLG K P ++ L GI Q A G S +T G +
Sbjct: 177 SASEVFCWGQNKYGQLGLGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 235
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
WG G+LG E+ Y P L+K L K+ G H+A + + G V
Sbjct: 236 GWGRNKFGQLGLNDEN---------DRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGV 286
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNE 316
+ FG ++ +H P + +L S ++ CG HT + S G +Y++G
Sbjct: 287 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 346
Query: 317 NGCLGIG 323
NG LG G
Sbjct: 347 NGQLGTG 353
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 184 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 243
Query: 102 QLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG+++ + Y L+ LR +++V I G H++A+T +G ++ +G GQLG
Sbjct: 244 QLGLNDENDRYVPYLLKSLR----SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 299
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
+ ++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 300 NSTSHEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 357
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 237 WGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 296
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 297 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 355
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 356 SNRKSPFTVK 365
>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
Length = 2141
Score = 108 bits (269), Expect = 5e-21, Method: Composition-based stats.
Identities = 91/324 (28%), Positives = 148/324 (45%), Gaps = 57/324 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKH-----SLKALACGGAHTLFLTETGCVYATGL 97
WG G+ G LG G P + ++K+ ++K +ACG H L L G VY+ G
Sbjct: 276 WGLGNSGGLGQGEQNVSMTPNIIK-YQKNGHLFQNIKDIACGSNHVLSLDHQGIVYSWGN 334
Query: 98 NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG + G ++ P I GL++ +++ I G S+AI++ EL++WG +G+LG
Sbjct: 335 GQGGRLGHGDETGENI-PKEIIGLRQYKILMIEAGEGSSAAISIKNELFIWGVGLHGRLG 393
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
GK A + P+ +E L + ALG S+ + GK + WG+ G+L G E++
Sbjct: 394 TGKTANVLKPV--MLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSSKDGKL--GLETA 449
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE-- 274
+ + P+ + L+ K+ AAG HS + ENG +Y FG+ K+ + E
Sbjct: 450 L-----DRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDEIK 504
Query: 275 GNHARRPSLISKLP--------------------YSEEVV-----------------CGG 297
GN + P I+ P + +++ CG
Sbjct: 505 GN-VQIPRKITNCPIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCGF 563
Query: 298 YHTCVLTSGGELYTWGSNENGCLG 321
T L + G++Y GSN+ G LG
Sbjct: 564 NSTVFLLNDGQMYVCGSNKYGQLG 587
Score = 97.8 bits (242), Expect = 5e-18, Method: Composition-based stats.
Identities = 80/301 (26%), Positives = 141/301 (46%), Gaps = 34/301 (11%)
Query: 43 WGNGDYGRLGLG-------SLESR------WRPVVCSAFEKHSLKALACGGAHTLFLTET 89
WG + GRLG+ ++E + ++P + + ++CG + TL L++
Sbjct: 211 WGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTLALSQE 270
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGEL 144
G VY+ GL + G LG E S+ P I K + + I+ G +H ++ G +
Sbjct: 271 GHVYSWGLGNSGGLGQGEQ-NVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDHQGIV 329
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
Y WG G+LG G + + IP I +A G S A++ ++ WG G
Sbjct: 330 YSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEG--SSAAISIKNELFIWGVG 387
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
GRLG G+ +++L P ++++L+ KV+ A G HS CI NG+ +G
Sbjct: 388 LHGRLGTGKTANVL---------KPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGS 438
Query: 265 RAVDKMLFQEG--NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
K+ + + +P + L + ++ G +H+ LT GE+Y++G++++G L
Sbjct: 439 SKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKL 498
Query: 321 G 321
G
Sbjct: 499 G 499
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 69/250 (27%), Positives = 118/250 (47%), Gaps = 26/250 (10%)
Query: 90 GCVYATGLNDFGQLGIS------ENI---GYSLEPLRISGLKKE----VVQISTGYHHSS 136
G V+ G+ + G+LGI+ ENI L P + S +K + ++++S G +
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTL 265
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT--KQAALGFEQSVAVTG 194
A++ +G +Y WG ++G LG G++ + P K + +F K A G +++
Sbjct: 266 ALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDH 325
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V SWG G GRLGHG E T E P+ I L K+ + AG SA I
Sbjct: 326 QGIVYSWGNGQGGRLGHGDE---------TGENIPKEIIGLRQYKILMIEAGEGSSAAIS 376
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTW 312
++I+G ++ + + +P ++ L E++ G H+ + G+ W
Sbjct: 377 IKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCW 436
Query: 313 GSNENGCLGI 322
GS+++G LG+
Sbjct: 437 GSSKDGKLGL 446
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 84/317 (26%), Positives = 133/317 (41%), Gaps = 50/317 (15%)
Query: 43 WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG D G+LG+G ++ +P + + + A G +H+LFL++ G V +G N+FG
Sbjct: 699 WGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTASGESHSLFLSDLGEVLCSGFNEFG 758
Query: 102 QLGISEN--------------------------IGYSLEPLRISGLKKEVVQISTGYHHS 135
+LGI N L P I GL+ + I+ G +HS
Sbjct: 759 ELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKIELTPKIIKGLE-SIGFIAAGKNHS 817
Query: 136 SAITV------DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
AI +L+ WG +GQ G G +P KV L QA+ G + +
Sbjct: 818 IAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHT 877
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A+ G + W G +G + F+ + E TP I+E K ++G H
Sbjct: 878 IALDTTGHI--WFFGYKPSVGIEDFNDEKQFMPARLE-TPSKIQE----PFKFISSGEEH 930
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTS 305
+ + ++G VY FG K+ N + + L +EE CG H+ ++ +
Sbjct: 931 NLAVTQSGLVYGFGKNTNTKI-----NSSHKEYLYFDQVENEEKAVLTACGANHSVLIDT 985
Query: 306 GGELYTWGSNENGCLGI 322
G YTWG NG G+
Sbjct: 986 KGVPYTWGFVGNGRCGL 1002
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 43/234 (18%)
Query: 115 PLRI--SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
PL I ++ ++ +STGY H A+T +G + WG+N NGQLG+G+K V+ PT+++
Sbjct: 665 PLTIYHDAVQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDT-VVSKPTRIK 723
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG------------- 219
L A G S+ ++ G+VL G G LG G S+ G
Sbjct: 724 SLQDKVIIMTASGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDE 783
Query: 220 -----FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ + E TP++IK LE + AAG HS I R Y ++A+ +
Sbjct: 784 NYQRQLIETKIELTPKIIKGLE--SIGFIAAGKNHSIAI----RTYKRKEKAMKLFTWGC 837
Query: 275 GNHARR----------PSLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWG 313
G H + P ++ K+P + + CG HT L + G ++ +G
Sbjct: 838 GWHGQTGHGSWQNDYLPQIV-KVPVLKDTKFIQASCGSKHTIALDTTGHIWFFG 890
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 51/284 (17%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTG 131
+K ++ G H L +T G + G ND GQLG+ +P RI L+ K ++ ++G
Sbjct: 677 IKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSLQDKVIIMTASG 736
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAA------KVIP------------IPTKVEC 173
HS ++ GE+ G N G+LG+G + K P I TK+E
Sbjct: 737 ESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKIEL 796
Query: 174 LSGIFTKQAALGF-----EQSVAV------TGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
I ++GF S+A+ K+ +WG G G+ GHG
Sbjct: 797 TPKIIKGLESIGFIAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQ------- 849
Query: 223 STSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-------DKMLFQ 273
++Y P+++K L+ K A+ G H+ +D G ++ FG + D+ F
Sbjct: 850 --NDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFGYKPSVGIEDFNDEKQFM 907
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
PS I + P+ + + G H +T G +Y +G N N
Sbjct: 908 PA-RLETPSKIQE-PF-KFISSGEEHNLAVTQSGLVYGFGKNTN 948
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 85/384 (22%), Positives = 147/384 (38%), Gaps = 105/384 (27%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G +GRLG G + +PV+ + ++ +A G H+L + G G + G
Sbjct: 383 IWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGKAMCWGSSKDG 442
Query: 102 QLGISENIGYSL-EPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+LG+ + + +P + L KE + QI+ G HS A+T +GE+Y +G + +G+LG +
Sbjct: 443 KLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDE 502
Query: 160 KAAKVIPIPTKV-----------------------------------ECLSGIFTKQAAL 184
V IP K+ + L G QA
Sbjct: 503 IKGNV-QIPRKITNCPIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQQLGGCEVIQAQC 561
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLG---------------------HGQESSILG---- 219
GF +V + G++ G+ G+LG G + + G
Sbjct: 562 GFNSTVFLLNDGQMYVCGSNKYGQLGFSKRAGGKDKDGNKMLINSNNDGNQGGMSGANDN 621
Query: 220 ------------FLRSTSE--YTPRLIKELE---------------------GVKVKIAA 244
FL+ S+ P+L K+L +K+K +
Sbjct: 622 DNDDDDNGIGGGFLQQNSDDVLPPQLKKKLAELQQLQDVEKPSPLTIYHDAVQMKIKHVS 681
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVV----CGGYH 299
G+ H + G + +G ++ + ++ +P+ I L ++V+ G H
Sbjct: 682 TGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSKPTRIKSL--QDKVIIMTASGESH 739
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ GE+ G NE G LGIG
Sbjct: 740 SLFLSDLGEVLCSGFNEFGELGIG 763
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 44/185 (23%)
Query: 16 QDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESR--WRPVVCSAFEKHSL 73
+DI LGS +C L+ A WG+ G+LGL + R +P +K L
Sbjct: 415 EDIALGSNHSLC------ILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEKL 468
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---------SGLKK- 123
+A G H++ LTE G +Y+ G + G+LG E G P +I +GL
Sbjct: 469 YQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIFARKTGLNDR 528
Query: 124 --------------------------EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
EV+Q G++ + + DG++Y+ G N GQLG
Sbjct: 529 RDKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCGFNSTVFLLNDGQMYVCGSNKYGQLGF 588
Query: 158 GKKAA 162
K+A
Sbjct: 589 SKRAG 593
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 40/236 (16%)
Query: 34 TLQRRFAAL----WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLT 87
T +R+ A+ WG G +G+ G GS ++ + P V + +CG HT+ L
Sbjct: 822 TYKRKEKAMKLFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALD 881
Query: 88 ETGCVY------ATGLNDFGQLGISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAI 138
TG ++ + G+ DF N P R+ S +++ IS+G H+ A+
Sbjct: 882 TTGHIWFFGYKPSVGIEDF-------NDEKQFMPARLETPSKIQEPFKFISSGEEHNLAV 934
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
T G +Y +GKN+N ++ K E + T A G SV + G
Sbjct: 935 TQSGLVYGFGKNTNTKINSSHKEYLYFDQVENEE--KAVLT---ACGANHSVLIDTKGVP 989
Query: 199 LSWGAGGSGRLG---------HGQES----SILGFLRSTSEYTPRLIKELEGVKVK 241
+WG G+GR G QES +++ F+++ + IKEL G K K
Sbjct: 990 YTWGFVGNGRCGLKLEKDDAQQEQESLSAPTVIYFMKTLFQKEIIKIKELLGDKYK 1045
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 66/194 (34%)
Query: 141 DGELYMWGKNSNGQLGLG----------KKAAKVIPI-PTKVECLSGIFTKQAALGFEQS 189
+G ++ WG + G+LG+ +K ++IP P+ V+ + I + + G +
Sbjct: 205 NGIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFT 264
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
+A++ G V SWG G SG LG G+++ + TP +IK
Sbjct: 265 LALSQEGHVYSWGLGNSGGLGQGEQNVSM---------TPNIIK---------------- 299
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
+NG LFQ +++ CG H L G +
Sbjct: 300 ---YQKNGH------------LFQN---------------IKDIACGSNHVLSLDHQGIV 329
Query: 310 YTWGSNENGCLGIG 323
Y+WG+ + G LG G
Sbjct: 330 YSWGNGQGGRLGHG 343
>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Papio anubis]
Length = 1023
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 15/219 (6%)
Query: 110 GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
YS++ LR + +K+++QI+ G +HS A++ GEL+ WG+N +GQLG+G+K
Sbjct: 122 DYSMKHLRSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTT-T 180
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P VE L+G+ Q + G S+A++ G V SWG G+LG G + S+
Sbjct: 181 PQIVEHLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGH---------TESKD 231
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
+P LI+ L+ KV+ A G HSA + ++G ++ FG ++ + RP L+++L
Sbjct: 232 SPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL 291
Query: 288 --PYSEEVVCGGYHTCVLTSG-GELYTWGSNENGCLGIG 323
++ CG +HT S G+++++GS ++G LG G
Sbjct: 292 VGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 330
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 13/200 (6%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 132 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 191
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGLG +K P+ +E L + A
Sbjct: 192 LAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESK--DSPSLIEALDNQKVEFLAC 249
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 250 GGSHSALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELVGNRVTQIA 300
Query: 245 AGFLHS-ACIDENGRVYIFG 263
G H+ A + + G+V+ FG
Sbjct: 301 CGRWHTLAYVSDLGKVFSFG 320
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LGLG ES+ P + A + ++ LACGG+H+ LT+ G ++ G GQ
Sbjct: 214 WGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G +GQLG G
Sbjct: 274 LG-HNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 332
Query: 161 AAKVIPIPTKV 171
++IP+P KV
Sbjct: 333 LDQLIPLPVKV 343
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G S P + L ++ G AH++ L+ +G VY+ G N+FG
Sbjct: 161 WGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNVYSWGKNEFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ P I L + V+ ++ G HS+ +T DG L+ +G +GQLG
Sbjct: 221 QLGLGHTESKD-SPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNST 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 280 QNEL--RPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 330
>gi|417764320|ref|ZP_12412289.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|418692186|ref|ZP_13253265.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. FPW2026]
gi|400353469|gb|EJP05640.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|400357976|gb|EJP14095.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. FPW2026]
Length = 506
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 131 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 188
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 189 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 247 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYIWGKNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 361 ALTSDGKIYSWGLNASGQLGIG 382
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 202 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 318
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
KN G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 319 KNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I ++G V +G +
Sbjct: 377 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKSGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 429 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP-TKVECLSGIFTKQAAL 184
++S G HS + ++GELY G+N+ GQLG G I KV+ + IF+ +
Sbjct: 129 TKLSAGGAHSGFL-INGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIRDIFS----I 183
Query: 185 GFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
F Q S+A++ G+V +WGA G+LG G ++ R++ + E+ G+ +
Sbjct: 184 HFNQNNSMAISQNGRVYTWGANSKGQLGIGNNNTDPA--RASDPGNRQPPTEIPGINDAV 241
Query: 243 AAA-GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-----PSLISKLPYSEEVVCG 296
A GF H+ + +G V FG V ++ E N R P + +L +V+ G
Sbjct: 242 MGAYGFNHALVLKSDGTVVAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRNVIQVIAG 301
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
H+ LT GE+Y WG N+ G LG G
Sbjct: 302 SEHSAALTENGEVYIWGKNQYGNLGNG 328
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 316 IWGKNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKSGEVKGWGANGNMASL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 137/265 (51%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + + ++ +ACG +H+ +T +G +Y GL ++G+
Sbjct: 3018 WGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3077
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L+ VVQ++ G + +T +G ++ WG G+LG G
Sbjct: 3078 LGHGDNCT-QLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG- 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ +P +VE L+G+ Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3136 -GSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHV-- 3192
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P I+ L G KV A G LH + ++G+V+ +GD D GN
Sbjct: 3193 -------RKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDN--DHGQQGSGNTVV 3243
Query: 279 -RRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3244 NKKPNLVLGLDGVFVNRVACGSSHS 3268
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 141/312 (45%), Gaps = 36/312 (11%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A +A GG TL+ +T G +YATG
Sbjct: 3949 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4006
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LGI S P + L+ +++ +++G H A++ DGE++ WG+ +G+LG
Sbjct: 4007 GRLGIGGTDSVS-TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4065
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P +E LSGI A G S +T G VL+WG G GRLGHG
Sbjct: 4066 GNRDS--YDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQ 4123
Query: 218 LG----FLRST--------------------SEYTPRLIKELEGVKVKIAAAGFLHSACI 253
L LR+T +P I+ L G+ V G S +
Sbjct: 4124 LQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVAL 4183
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
+G VY +G ++ +H RRP ++ L + + G H + GE++T
Sbjct: 4184 TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFT 4243
Query: 312 WGSNENGCLGIG 323
WG N+ G LG G
Sbjct: 4244 WGDNDEGQLGDG 4255
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 126/286 (44%), Gaps = 17/286 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H + LT G V++ G + G
Sbjct: 2965 GEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3024
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG + L S K + I+ G HS+AIT GELY WG G+LG G
Sbjct: 3025 KLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNC 3084
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P V L G Q A G Q++ +T G V SWG G G+LG G
Sbjct: 3085 TQL--KPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGG------ 3136
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
S P ++ L GV V G S + + G V+ +G ++ H R
Sbjct: 3137 ---SEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVR 3193
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+P+ I L + V G H +T G+++ WG N++G G G
Sbjct: 3194 KPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSG 3239
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A C G H + L+ G VY+ G + G+LG + + P +I+ L+K+V I G +
Sbjct: 583 AAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEV-PTKIA-LEKQVTAIYAGASY 640
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+A++ GEL+ WG+ + G+LG G K +PT+V+ L ALG S+AV
Sbjct: 641 SAAVSSVGELFTWGRGTYGRLGHGNSDDKF--VPTQVQALKAYKVVDVALGSGDAHSMAV 698
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSA 251
T GG + +WG G G+LG+G + +P L ++EGV V +G S
Sbjct: 699 TDGGLLFAWGDGDFGKLGNG-----------SCNGSP-LPVQIEGVSSVARIYSGSQFSV 746
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
+ +G +Y +G ++ H+ P L+ L + +V G H LTS GEL
Sbjct: 747 ALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGEL 806
Query: 310 YTWGSNE 316
Y WG N+
Sbjct: 807 YGWGRND 813
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 25/292 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
+WG D +LG G S+ + P S + LK + GG+ +LF+ ++ G +YA G
Sbjct: 2911 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHISGGSKSLFIVSQDGKLYACGEG 2967
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
G+LG+ N P ++ L + VV+ + +G H+ A+T+DG+++ WG+ +G+L
Sbjct: 2968 TNGRLGLGHNNNVP-TPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3026
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G + + P +E L + A G S A+T G++ +WG G GRLGHG
Sbjct: 3027 GHGNRV--TLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3082
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
+ ++ P+L+ L+G +V A G + C+ E G V+ +GD K+
Sbjct: 3083 -------NCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3135
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + +L ++ CG + LT GE++TWG + LG G
Sbjct: 3136 GSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHG 3187
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 118/248 (47%), Gaps = 37/248 (14%)
Query: 92 VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
V GLND QLG ++ L+P+ ISG K + +S D
Sbjct: 2909 VLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQ----------D 2958
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
G+LY G+ +NG+LGLG +P P +V L+ K+ A+ G + ++A+T GKV
Sbjct: 2959 GKLYACGEGTNGRLGLGHN--NNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVF 3016
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
SWG G G+LGHG R T E P+L++ L +++ A G HSA I +G +
Sbjct: 3017 SWGEGEDGKLGHGN--------RVTLE-KPKLLESLRTKRIRDIACGSSHSAAITSSGEL 3067
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
Y +G ++ + +P L++ L +V CG T LT G +++WG
Sbjct: 3068 YTWGLGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDG 3127
Query: 316 ENGCLGIG 323
+ G LG G
Sbjct: 3128 DFGKLGRG 3135
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 6/162 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG G YGRLG G+ + ++ P A + + + AL G AH++ +T+ G ++A G DF
Sbjct: 653 WGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDF 712
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG G L P++I G+ V +I +G S A++ DG LY WGK G+LG G
Sbjct: 713 GKLGNGSCNGSPL-PVQIEGVSS-VARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNS 770
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+P V L G A+G +A+T G++ WG
Sbjct: 771 EHS--NVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 111/224 (49%), Gaps = 19/224 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ GRLG G S+ P A EK + A+ G +++ ++ G ++ G +G+
Sbjct: 603 WGAGEGGRLGHGDTASKEVPTKI-ALEKQ-VTAIYAGASYSAAVSSVGELFTWGRGTYGR 660
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG N P ++ LK +VV ++ +G HS A+T G L+ WG G+LG G
Sbjct: 661 LG-HGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNG- 718
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+P ++E +S + + G + SVA++ G + SWG G GRLGHG
Sbjct: 719 -SCNGSPLPVQIEGVSSV--ARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGN------ 769
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
S P+L+ LEG K+ A G H + +G +Y +G
Sbjct: 770 ---SEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 30/257 (11%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTG 131
++ +AC +T +G +Y+ I + ++ P + GL+ V+QI+
Sbjct: 536 VRQVACTENSIYIVTTSGQLYS----------IHSSCAETVAPKLVEGLEGVSVIQIAAH 585
Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
H+ A++ GE+Y WG G+LG G A+K +P +E ++ I+ G
Sbjct: 586 CEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYA-----GASY 640
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AG 246
S AV+ G++ +WG G GRLGHG S ++ P ++ L+ KV A +G
Sbjct: 641 SAAVSSVGELFTWGRGTYGRLGHGN---------SDDKFVPTQVQALKAYKVVDVALGSG 691
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
HS + + G ++ +GD K+ N + P I + + G + L+
Sbjct: 692 DAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIYSGSQFSVALSYD 751
Query: 307 GELYTWGSNENGCLGIG 323
G LY+WG G LG G
Sbjct: 752 GTLYSWGKGHGGRLGHG 768
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 100/241 (41%), Gaps = 44/241 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ +S RP + A + +ACG AH+ +T G V G +G+
Sbjct: 4055 WGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGR 4114
Query: 103 LG-------------------------------ISENIGY-SLEPLRISGLKKE-VVQIS 129
LG ++E + + P++I L V+++
Sbjct: 4115 LGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVE 4174
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G S A+T G +Y WGK +LG G + P KV L G A G
Sbjct: 4175 CGSQFSVALTRSGSVYTWGKGDYHRLGHGN--TDHVRRPKKVAALQGKKIISIATGSLHC 4232
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
VA + G+V +WG G+LG G ++I PRL++ L+G + G H
Sbjct: 4233 VACSDSGEVFTWGDNDEGQLGDGTVTAI---------QRPRLVQSLQGKHIVKVICGSAH 4283
Query: 250 S 250
+
Sbjct: 4284 T 4284
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD+G+LG G E P + + CG +L LT+ G V+ G D+ +
Sbjct: 3124 WGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYR 3183
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + +P I GL+ K+V+ ++ G H A+T G+++ WG N +GQ G G
Sbjct: 3184 LGHGTD-QHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSGNTV 3242
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
V P V L G+F + A G SVA
Sbjct: 3243 --VNKKPNLVLGLDGVFVNRVACGSSHSVA 3270
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S+ + ++ +WG N QLG G K +KV +PT LS + + G + V+
Sbjct: 2901 SSNEISSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHISGGSKSLFIVSQD 2958
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
GK+ + G G +GRLG G +++ TPR + L VK A +G H+ +
Sbjct: 2959 GKLYACGEGTNGRLGLGHNNNV---------PTPRQVPILNQYVVKKVAVHSGGKHAMAL 3009
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYT 311
+G+V+ +G+ K+ +P L+ L ++ CG H+ +TS GELYT
Sbjct: 3010 TLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYT 3069
Query: 312 WGSNENGCLGIG 323
WG E G LG G
Sbjct: 3070 WGLGEYGRLGHG 3081
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 37/185 (20%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVC----------------------------SAFEKHSLK 74
WG G YGRLG G E + +P C S + SL
Sbjct: 4107 WGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLA 4166
Query: 75 AL-----ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQI 128
L CG ++ LT +G VY G D+ +LG N + P +++ L+ K+++ I
Sbjct: 4167 GLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLG-HGNTDHVRRPKKVAALQGKKIISI 4225
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+TG H A + GE++ WG N GQLG G A I P V+ L G + G
Sbjct: 4226 ATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTA--IQRPRLVQSLQGKHIVKVICGSAH 4283
Query: 189 SVAVT 193
++A++
Sbjct: 4284 TLALS 4288
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG N GQLG G ++ I +PT E LS + Q A G + AVT GK+ + G
Sbjct: 3946 IFGWGHNHRGQLG-GLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 4003
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
G GRLG G S+ TP L++ L+ V +K A +G H + +G V+
Sbjct: 4004 GAGGRLGIGGTDSV---------STPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFS 4054
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
+G+ K+ + RP LI L ++ CG H+ +TS G + TWG G
Sbjct: 4055 WGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGR 4114
Query: 320 LGIG 323
LG G
Sbjct: 4115 LGHG 4118
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G GRLG G+ E P + A E + +A G AH L LT +G +Y G ND+ Q
Sbjct: 757 WGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQ 816
Query: 103 LGISENIGYSLEPL 116
+ S G S +P+
Sbjct: 817 ICPS---GVSRDPI 827
>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
distachyon]
Length = 913
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 30/298 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG GS E P + + ++ +ACG HT +T G +Y G ++
Sbjct: 116 WGEESGGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNI 175
Query: 101 GQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG ++V +S G H++ IT G+L+ +G + G LG G
Sbjct: 176 GLLGHGTDLSHWI-PKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHG 234
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + IP P +VE LSG+ T A G + AV GK+ +WG G
Sbjct: 235 NRES--IPCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKH 292
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + P + L A G + + +G+V+ G+ V
Sbjct: 293 RLGHGDKEP---------RVKPTCVASLIDYDFHRIACGHSLTVGLTTSGQVWGMGN-TV 342
Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + + P L+ + +V CG YH VLT E++TWG NG LG G
Sbjct: 343 YGQLGNPRSDGKLPCLVEDIMGENVVQVACGSYHVAVLTVKSEVFTWGKGANGRLGHG 400
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E R +P ++ + +ACG + T+ LT +G V+ G +GQ
Sbjct: 286 WGDGDKHRLGHGDKEPRVKPTCVASLIDYDFHRIACGHSLTVGLTTSGQVWGMGNTVYGQ 345
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + G L L + + VVQ++ G +H + +TV E++ WGK +NG+LG G
Sbjct: 346 LGNPRSDG-KLPCLVEDIMGENVVQVACGSYHVAVLTVKSEVFTWGKGANGRLGHGDIED 404
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ IPT VE L + A G + A+
Sbjct: 405 R--KIPTLVEVLRDRGVRHIACGANFTAAI 432
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 103/233 (44%), Gaps = 42/233 (18%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
+PL S L +V + G H++ +T +GE++ WG+ S G+LG G + + P+ VE
Sbjct: 84 KPLE-SKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYI--HPSLVES 140
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS--GRLGHGQESSILGFLRSTSEYTPRL 231
L+ A G + AVT G++ +WG G G LGHG + S + P+
Sbjct: 141 LAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTD---------LSHWIPKR 191
Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
I LEG +V + G H+A I G+++ FGD F H R S+ P
Sbjct: 192 ISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGT-----FGVLGHGNRESI--PCPRE 244
Query: 291 EE---------VVCGGYHTCVLTS-----------GGELYTWGSNENGCLGIG 323
E V CG +HT + G+L+TWG + LG G
Sbjct: 245 VESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHG 297
>gi|398338907|ref|ZP_10523610.1| regulator of chromosome condensation [Leptospira kirschneri serovar
Bim str. 1051]
gi|421130676|ref|ZP_15590868.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri str. 2008720114]
gi|410357779|gb|EKP04984.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri str. 2008720114]
Length = 507
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 131/263 (49%), Gaps = 26/263 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG+ + G ++ RI + + ++ I +
Sbjct: 132 LSAGGAHSGFLI-NGELYTVGRNNFGQLGMGISTGDNIND-RIMKVDRIRDIFSIHFNQN 189
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK---------AAKVIPIPTKVECLSGIFTKQAAL 184
+S AI+ G +Y WG NS GQLG+G A P PT++ ++ A
Sbjct: 190 NSMAISQSGRVYTWGANSKGQLGIGNNNTDPAKASDAGNRQP-PTEIPGINNAV--MGAY 246
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
GF ++ + G V+++G G+LG+G+ + R++ P + +L V IA
Sbjct: 247 GFNHALILKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVIA- 301
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
G HSA + ENG VY++G + + N + P + LP +++ G H
Sbjct: 302 -GSEHSAALTENGEVYVWGRNQYGNLGNGIVSPANTVQSVPVKVEGLPKIKQIANGRDHI 360
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
LT G++Y+WG N +G LGIG
Sbjct: 361 LALTYDGKIYSWGLNASGQLGIG 383
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 133/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 203 WGANSKGQLGIGNNNTDPAKASDAGNRQPPTEIPGINNAVMGAY--GFNHALILKSDGTV 260
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 261 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYVWG 319
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE L I KQ A G + +A+T GK+ SWG S
Sbjct: 320 RNQYGNLGNGIVSPANTVQSVPVKVEGLPKI--KQIANGRDHILALTYDGKIYSWGLNAS 377
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 378 GQLGIGGNGNPPPTPIPTKILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 429
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 430 NMASLALGESNTPKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 488
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP-TKVECLSGIFTKQAAL 184
++S G HS + ++GELY G+N+ GQLG+G I KV+ + IF+ +
Sbjct: 130 TKLSAGGAHSGFL-INGELYTVGRNNFGQLGMGISTGDNINDRIMKVDRIRDIFS----I 184
Query: 185 GFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
F Q S+A++ G+V +WGA G+LG G ++ P E+ G+ +
Sbjct: 185 HFNQNNSMAISQSGRVYTWGANSKGQLGIGNNNTDPAKASDAGNRQPP--TEIPGINNAV 242
Query: 243 AAA-GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-----PSLISKLPYSEEVVCG 296
A GF H+ + +G V FG V ++ E N R P + +L +V+ G
Sbjct: 243 MGAYGFNHALILKSDGTVVAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRNVIQVIAG 302
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
H+ LT GE+Y WG N+ G LG G
Sbjct: 303 SEHSAALTENGEVYVWGRNQYGNLGNG 329
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 317 VWGRNQYGNLGNGIVSPANTVQSVPVKVEGLPK--IKQIANGRDHILALTYDGKIYSWGL 374
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 375 NASGQLGIGGNGNPPPTPIPTKILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 434
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 435 ALGESNTPKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 488
>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
Length = 560
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
G G YGRLG G+ S P++ F K L G+ H++ + + G ++ G D+G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYG 244
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG ++ L + + +V G+ HS+A+ G LYMWG+ G+LGLG
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDAL 304
Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
+ +P+ P E Q GF +V ++ G+ V S+GA +G+LGHG
Sbjct: 305 QRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGD----- 353
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------DRAVDKMLF 272
+ ++ P++I L+G+ + AAG SA + G +Y++G + + D+
Sbjct: 354 ----TNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFM 409
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ L ++ G H LT G ++TWG+N+NG G G
Sbjct: 410 -------LPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTG 455
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G ++ P + A + CG H+ + + G +Y G D+G+
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGR 297
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKA 161
LG+ + + S+ P+++ + +E Q+ G++H+ ++ DG ++ +G NG+LG G
Sbjct: 298 LGLGDALQRSV-PVQVPDI-REASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTN 355
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P ++ L G+ Q A G + S AVT G + WG G G E+ +L
Sbjct: 356 RQF--RPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFML--- 410
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
P++++ L G V A G H + ++G V+ +G+
Sbjct: 411 -------PKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNN 447
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDF 100
+WG GDYGRLGLG R PV + S + CG HT+ L+ G V++ G +
Sbjct: 289 MWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAEN 346
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + P I L+ + QI+ G S+A+T +G LY+WG LG G
Sbjct: 347 GKLGHGDT-NRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNG- 402
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P V LSG A+G VA+T G V +WG +G+ G G G
Sbjct: 403 SSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTGS-----G 457
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
TS P++++ L G ++ AG H+
Sbjct: 458 MATYTS---PQMVQGLHGAGIQQVTAGTTHT 485
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 14/234 (5%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ G N QL + L P +S K V+ I+ G + + A+ +G + GK S
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK-VMSITAGQYCTFAVLSNGTVMANGKGS 189
Query: 152 NGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LG G A+ PI + + I T + + G S+A+ G++ +WG G G+LG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSMAIGKNGQIWTWGDGDYGKLG 247
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG ST++ +P+LI+ L + A G HSA + + G +Y++G+ ++
Sbjct: 248 HGD---------STTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRL 298
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIG 323
+ P + + + +VVCG HT VL T G ++++G+ ENG LG G
Sbjct: 299 GLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG 352
>gi|299116182|emb|CBN74531.1| similar to retinitis pigmentosa GTPase regulator [Ectocarpus
siliculosus]
Length = 983
Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats.
Identities = 95/301 (31%), Positives = 129/301 (42%), Gaps = 46/301 (15%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK----ALACGGAHTLFLTETGCVYA 94
F WG G +G+LG G S P + + L +ACGG H+ T+ G V+
Sbjct: 114 FVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFT 173
Query: 95 TGLNDFGQLGISENIGYSLEPLRIS------GLKKEVVQISTGYHHSSAITVDGELYMWG 148
G N +GQ G EP + G EV ++ G HHS+ +T G LY WG
Sbjct: 174 WGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVTRGGALYTWG 233
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
S G+LGL + A K + IP +V S QAA G VA++ +V SWG G G+
Sbjct: 234 ACSFGKLGL-QDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQ 292
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----- 263
GHG L +R PR + L+ V V G S I +G Y +G
Sbjct: 293 GGHGS----LLHMR-----MPRRVSSLQEVPVAQVVCGPWWSMAITVDGYCYAWGSADGG 343
Query: 264 -------------------DRAVDKMLFQEGNHARRPSLISKL-PYSE-EVVCGGYHTCV 302
DRAV+ F ++ P+L+ L PY +V CGG HT V
Sbjct: 344 WTGLTRPPGLRVVDPGPSADRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLV 403
Query: 303 L 303
+
Sbjct: 404 V 404
Score = 90.1 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 78/263 (29%), Positives = 119/263 (45%), Gaps = 30/263 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-------SLEPLRISGLKKEVVQI 128
+ CG HT+ L + G V + G FGQLG +N Y L+P R L + VVQ+
Sbjct: 99 VCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQR---LGERVVQV 155
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF------TKQA 182
+ G +HS+ T G ++ WG N GQ G G K +P P+ V+ LS + +
Sbjct: 156 ACGGYHSAVATDAGRVFTWGFNRYGQCGNGSK-DNTVPEPSLVD-LSRVTPGAVGEVPKV 213
Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G S VT GG + +WGA G+LG + + + ++ + + +
Sbjct: 214 LCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQ-------- 265
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
AAAG H + V+ +G A + H R P +S L P + +VVCG +
Sbjct: 266 AAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVA-QVVCGPWW 324
Query: 300 TCVLTSGGELYTWGSNENGCLGI 322
+ +T G Y WGS + G G+
Sbjct: 325 SMAITVDGYCYAWGSADGGWTGL 347
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 31/206 (15%)
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
+ G +HS T +G+L+ WG V P PT V + + G +
Sbjct: 56 AAGANHSILRTSEGKLFRWGVED----------GDVHPFPTGVCTQIPLPCIEVCCGRKH 105
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE----GVKVKIAA 244
+VA+ GG V+SWG G G+LGHG +S PRL++ L+ G +V A
Sbjct: 106 TVALMKGGFVMSWGTGYFGQLGHGDNASY---------RHPRLLRRLDPQRLGERVVQVA 156
Query: 245 AGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHARRPSLIS-------KLPYSEEVVCG 296
G HSA + GRV+ +G +R + N PSL+ + +V+CG
Sbjct: 157 CGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCG 216
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGI 322
+H+ ++T GG LYTWG+ G LG+
Sbjct: 217 RHHSALVTRGGALYTWGACSFGKLGL 242
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 101/259 (38%), Gaps = 30/259 (11%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSS 136
A G H++ T G ++ G+ D + + PL +++ G H+
Sbjct: 56 AAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQI-PL-------PCIEVCCGRKHTV 107
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPI------PTKVECLSGIFTKQAALGFEQSV 190
A+ G + WG GQLG G A+ P P ++ G Q A G S
Sbjct: 108 ALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRL----GERVVQVACGGYHSA 163
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSIL--GFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
T G+V +WG G+ G+G + + + L S TP + E+ V G
Sbjct: 164 VATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKV-----LCGRH 218
Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYSEEVVCGGYHTCVLT 304
HSA + G +Y +G + K+ Q+ + + S P + G +H L+
Sbjct: 219 HSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLV-QAAAGDFHMVALS 277
Query: 305 SGGELYTWGSNENGCLGIG 323
E+++WG G G G
Sbjct: 278 RKREVFSWGYGAEGQGGHG 296
>gi|418677141|ref|ZP_13238419.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|421090648|ref|ZP_15551439.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri str. 200802841]
gi|400323041|gb|EJO70897.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|410000530|gb|EKO51159.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri str. 200802841]
Length = 507
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 131/263 (49%), Gaps = 26/263 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG+ + G ++ RI + + ++ I +
Sbjct: 132 LSAGGAHSGFLI-NGELYTVGRNNFGQLGMGISTGDNIND-RIMKVDRIRDIFSIHFNQN 189
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK---------AAKVIPIPTKVECLSGIFTKQAAL 184
+S AI+ G +Y WG NS GQLG+G A P PT++ ++ A
Sbjct: 190 NSMAISQSGRVYTWGANSKGQLGIGNNNTDPAKASDAGNRQP-PTEIPGINNAV--MGAY 246
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
GF ++ + G V+++G G+LG+G+ + R++ P + +L V IA
Sbjct: 247 GFNHALILKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVIQLRNVIQVIA- 301
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
G HSA + ENG VY++G + + N + P + LP +++ G H
Sbjct: 302 -GSEHSAALTENGEVYVWGRNQYGNLGNGIVSPANTVQSVPVKVEGLPKIKQIANGRDHI 360
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
LT G++Y+WG N +G LGIG
Sbjct: 361 LALTYDGKIYSWGLNASGQLGIG 383
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 133/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 203 WGANSKGQLGIGNNNTDPAKASDAGNRQPPTEIPGINNAVMGAY--GFNHALILKSDGTV 260
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 261 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVIQLRN-VIQVIAGSEHSAALTENGEVYVWG 319
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE L I KQ A G + +A+T GK+ SWG S
Sbjct: 320 RNQYGNLGNGIVSPANTVQSVPVKVEGLPKI--KQIANGRDHILALTYDGKIYSWGLNAS 377
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 378 GQLGIGGNGNPPPTPIPTKILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 429
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 430 NMASLALGESNTPKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 488
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP-TKVECLSGIFTKQAAL 184
++S G HS + ++GELY G+N+ GQLG+G I KV+ + IF+ +
Sbjct: 130 TKLSAGGAHSGFL-INGELYTVGRNNFGQLGMGISTGDNINDRIMKVDRIRDIFS----I 184
Query: 185 GFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
F Q S+A++ G+V +WGA G+LG G ++ P E+ G+ +
Sbjct: 185 HFNQNNSMAISQSGRVYTWGANSKGQLGIGNNNTDPAKASDAGNRQPP--TEIPGINNAV 242
Query: 243 AAA-GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-----PSLISKLPYSEEVVCG 296
A GF H+ + +G V FG V ++ E N R P + +L +V+ G
Sbjct: 243 MGAYGFNHALILKSDGTVVAFGQNNVGQLGNGENNLNRNSFSSNPVNVIQLRNVIQVIAG 302
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
H+ LT GE+Y WG N+ G LG G
Sbjct: 303 SEHSAALTENGEVYVWGRNQYGNLGNG 329
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 317 VWGRNQYGNLGNGIVSPANTVQSVPVKVEGLPK--IKQIANGRDHILALTYDGKIYSWGL 374
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 375 NASGQLGIGGNGNPPPTPIPTKILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 434
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 435 ALGESNTPKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 488
>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
Length = 1016
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 28/250 (11%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSS 136
G H L L+ G + E YS++ LR + +K+++QI+ G +HS
Sbjct: 105 GAEHMLILSSDGKPF-------------EYDNYSMKHLRFENVLQEKKIIQITCGDYHSL 151
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A++ GEL+ WG+N +GQLG+G+K P VE L+G+ Q + G S+A++ G
Sbjct: 152 ALSKGGELFAWGQNLHGQLGVGRKFPSTT-TPQIVEHLAGVPLAQISAGEAHSMALSMSG 210
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+ SWG G+LG G + S+ P LI+ L+ KV+ A G HSA + ++
Sbjct: 211 NIYSWGKNEFGQLGLGH---------TESKDYPSLIEGLDNQKVEFVACGGSHSALLTQD 261
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSG-GELYTWG 313
G ++ FG ++ + RP L+++L ++ CG +HT S G+++++G
Sbjct: 262 GLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFG 321
Query: 314 SNENGCLGIG 323
S ++G LG G
Sbjct: 322 SGKDGQLGNG 331
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 19/264 (7%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
+ ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 NVLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGLG +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESK--DYPSLIEGLDNQKVEFVAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELVGYRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT--- 300
G H+ A + + G+V+ FG D L G + L K+ SEE+ + +
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGS-GKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKE 360
Query: 301 CVLTSGGE--LYTWGSNENGCLGI 322
++ +GG + W EN + +
Sbjct: 361 LIMIAGGNQSILLWIKKENSYVNL 384
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 10/175 (5%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G S P + L ++ G AH++ L+ +G +Y+ G N+FG
Sbjct: 162 WGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFG 221
Query: 102 QLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ +E+ Y P I GL + V+ ++ G HS+ +T DG L+ +G +GQLG
Sbjct: 222 QLGLGHTESKDY---PSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHN 278
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 279 STQNEL--RPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LGLG ES+ P + + ++ +ACGG+H+ LT+ G ++ G GQ
Sbjct: 215 WGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G +GQLG G
Sbjct: 275 LG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 161 AAKVIPIPTKV 171
+++P+P KV
Sbjct: 334 RDQLMPLPVKV 344
>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
Length = 1024
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 128/250 (51%), Gaps = 28/250 (11%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSS 136
G H L L+ G + E YS++ LR + +K+++QI+ G +HS
Sbjct: 105 GAEHMLILSSDGKPF-------------EYDNYSMKHLRFESILQEKKIIQITCGDYHSL 151
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A++ GEL+ WG+N +GQLG+G+K P VE L+G+ Q + G S A++ G
Sbjct: 152 ALSKGGELFAWGQNLHGQLGVGRKFPSTT-TPQIVEHLAGVPLAQISAGEAHSTALSMSG 210
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+ SWG G+LG G + S+ P LI+ L+ KV+ A G HSA + ++
Sbjct: 211 NIYSWGKNECGQLGLGH---------TESKDDPSLIEGLDNQKVEFVACGGSHSALLTQD 261
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSG-GELYTWG 313
G ++ FG ++ + RP L+++L ++ CG +HT S G+++++G
Sbjct: 262 GLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFG 321
Query: 314 SNENGCLGIG 323
S ++G LG G
Sbjct: 322 SGKDGQLGNG 331
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 126/264 (47%), Gaps = 19/264 (7%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS+A+++ G +Y WGKN GQLGLG +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESK--DDPSLIEGLDNQKVEFVAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELVGYRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT--- 300
G H+ A + + G+V+ FG D L G + L K+ SEE+ + +
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGS-GKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKE 360
Query: 301 CVLTSGGE--LYTWGSNENGCLGI 322
++ +GG + W EN + +
Sbjct: 361 LIMIAGGNQSILLWIKKENSYVNL 384
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGLG ES+ P + + ++ +ACGG+H+ LT+ G ++ G GQ
Sbjct: 215 WGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G +GQLG G
Sbjct: 275 LG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 161 AAKVIPIPTKV 171
+++P+P KV
Sbjct: 334 RDQLMPLPVKV 344
>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
distachyon]
Length = 1007
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 151/326 (46%), Gaps = 27/326 (8%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L + C R I+ T ++ WG GRLG G+ E RP + + +
Sbjct: 248 LESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSN 307
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKK--EVVQIS 129
++ +ACG HT +T +G +Y G + + IG S P R+SG + +V+ ++
Sbjct: 308 VEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVA 367
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HS+ G+++ +G + G LG G + + + P +VE LSG T + A G S
Sbjct: 368 CGSWHSALAMSSGKVFTFGDGTFGALGHGNR--ENVAYPKEVESLSGFRTMKVACGVWHS 425
Query: 190 VAV------TG----GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
A+ TG K+ +WG G RLGHG + + L P +++ L
Sbjct: 426 AAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARL---------VPTVVQALVDNN 476
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGG 297
A G+ + + +G V+ G ++ + + + + KL EE+ CG
Sbjct: 477 FHQVACGYSMTIALATSGHVFTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGS 536
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
YH VLTS E+YTWG NG LG G
Sbjct: 537 YHVAVLTSRSEVYTWGMGANGRLGHG 562
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E+R P V A ++ +ACG + T+ L +G V+ G +++GQ
Sbjct: 447 WGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIALATSGHVFTMGSSNYGQ 506
Query: 103 LGISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + G +P ++ L E+V +IS G +H + +T E+Y WG +NG+LG G
Sbjct: 507 LGNPKADGK--QPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTWGMGANGRLGHGGI 564
Query: 161 AAKVIPIPTKVECLSGIFTKQAALG 185
K PT V+ L K A G
Sbjct: 565 EDK--KKPTIVDALKDRHVKSIACG 587
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
G++Y+WG+ S G L V+ IP +E + +Q + G T
Sbjct: 214 GDVYVWGEVWTDVIPSEGSSNLVCSKTDVL-IPKPLESDVVLDVQQISCGSRHIALTTRQ 272
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G+V +WG GRLGHG + I P+L++ L V+ A G H+ +
Sbjct: 273 GEVFTWGEELGGRLGHGTDEDI---------SRPKLVESLAVSNVEYIACGEFHTCAVTA 323
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
+G +Y +GD + + L G A P +S +V+ CG +H+ + S G+++
Sbjct: 324 SGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSALAMSSGKVF 383
Query: 311 TWGSNENGCLGIG 323
T+G G LG G
Sbjct: 384 TFGDGTFGALGHG 396
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
WG G GRLG G +E + +P + A + +K++ACG T
Sbjct: 551 WGMGANGRLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFT 591
>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
Length = 1098
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 139/299 (46%), Gaps = 31/299 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G ++ +P + A ++ +ACG HT +T G +Y G ++
Sbjct: 303 WGEESGGRLGHGVGKNVVQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNA 362
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RI+G + +V ++ G H++ IT G+L+ +G + G LG G
Sbjct: 363 GLLGHGTDVSHWI-PKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 421
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
+ + + P +VE LSG+ T A G QS A GK+ +WG G
Sbjct: 422 DR--ENVSYPREVESLSGLRTIAVACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKN 479
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + + R P LI++ A G + + +GRV+ G V
Sbjct: 480 RLGHGDKDA-----RLEPTCVPSLIED----NFHRIACGHSLTVGLTTSGRVFTMGS-TV 529
Query: 268 DKMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L + + P L+ EE+ CG YH VLTS E++TWG NG LG G
Sbjct: 530 YGQLGNPQSDGKLPCLVEDKFAGESVEEIACGAYHVAVLTSKNEVFTWGKGANGRLGHG 588
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V+QI+ G H++ +T GEL+ WG+ S G+LG G K + P VE ++ A
Sbjct: 280 DVLQIACGVKHAALVTRQGELFTWGEESGGRLGHG--VGKNVVQPRLVEAMASTTVDFVA 337
Query: 184 LGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKV 240
G + AVT G++ +WG G +G LGHG + S + P+ I LEG++V
Sbjct: 338 CGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTD---------VSHWIPKRIAGPLEGLQV 388
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
+ G H+A I G+++ FGD + + + P + L + V CG +
Sbjct: 389 ALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVW 448
Query: 299 HTCVL-----------TSGGELYTWGSNENGCLGIG 323
HT + S G+L+TWG + LG G
Sbjct: 449 HTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 484
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G ++R P + + + +ACG + T+ LT +G V+ G +GQ
Sbjct: 473 WGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQ 532
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ G + + V +I+ G +H + +T E++ WGK +NG+LG G
Sbjct: 533 LGNPQSDGKLPCLVEDKFAGESVEEIACGAYHVAVLTSKNEVFTWGKGANGRLGHGDVED 592
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PT VE L K A G S A+
Sbjct: 593 R--KSPTLVEALKDRHVKYIACGSNYSSAI 620
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 22/195 (11%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ + ++G K A+ P +P +E + Q A G + + VT
Sbjct: 236 GDVYIWGEVICENVVKVGAEKSASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVT 295
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G++ +WG GRLGHG +++ PRL++ + V A G H+ +
Sbjct: 296 RQGELFTWGEESGGRLGHGVGKNVV---------QPRLVEAMASTTVDFVACGEFHTCAV 346
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
G +Y +GD + L G P I+ + V CG +HT ++TS G+
Sbjct: 347 TMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHTALITSTGQ 406
Query: 309 LYTWGSNENGCLGIG 323
L+T+G G LG G
Sbjct: 407 LFTFGDGTFGVLGHG 421
>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
Length = 1020
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 149/328 (45%), Gaps = 31/328 (9%)
Query: 14 LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
L+ D+ L + C R I+ T ++ WG GRLG G+ RP + A +
Sbjct: 249 LESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSN 308
Query: 73 LKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
++ +ACG HT +T +G +Y G + G LG + L P R+SG + +V+ +
Sbjct: 309 VEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWL-PKRVSGPLEGVQVLSV 367
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G HS+ T G+++ +G + G LG GK+ + + P +VE LSG T + A G
Sbjct: 368 SCGSWHSALTTSSGKVFTFGDGTFGALGHGKR--ETVGYPKEVEALSGFRTMKVACGLWH 425
Query: 189 SVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
S A+ K+ +WGAG +LGHG + S L P ++ L
Sbjct: 426 SAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRL---------VPTCVQSLIDY 476
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVC 295
A G + + +G V+ G + + L + ++P + EE+ C
Sbjct: 477 SFHQVACGHSMTIALSTSGHVFTMGSSS-NGQLGNPKSDGKQPIPVQDRLSGELVEEISC 535
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H VLTS E+YTWG NG LG G
Sbjct: 536 GSCHVAVLTSRSEVYTWGMGANGRLGHG 563
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 38/299 (12%)
Query: 43 WGNGDY--GRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G Y G LG G+ S W P V E + +++CG H+ T +G V+ G
Sbjct: 331 WGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGT 390
Query: 100 FGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT----------VDGELYMW 147
FG LG E +GY E +SG + ++++ G HS+AI + +LY W
Sbjct: 391 FGALGHGKRETVGYPKEVEALSGFR--TMKVACGLWHSAAIVESSNHVSINVISRKLYTW 448
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G QLG G K ++++P T V+ L Q A G ++A++ G V + G+ +G
Sbjct: 449 GAGDKNQLGHGDKDSRLVP--TCVQSLIDYSFHQVACGHSMTIALSTSGHVFTMGSSSNG 506
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
+LG+ +S + + L G V+ + G H A + VY +G A
Sbjct: 507 QLGNP---------KSDGKQPIPVQDRLSGELVEEISCGSCHVAVLTSRSEVYTWGMGAN 557
Query: 268 DKMLFQEGNHARRPSLISKLP--YSEEVVCG-GYHTCVLTSGGELYTW--GSNENGCLG 321
++ ++P+L+ L + + + CG + TC+ ++ W G++++ C G
Sbjct: 558 GRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCIC-----IHKWVSGADQSVCSG 611
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 23/194 (11%)
Query: 142 GELYMWGK------NSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
G++Y+WG+ + G L KA +IP P + + + + +Q A G+ T
Sbjct: 215 GDVYVWGEVWTDVIPAEGSTNYLCSKADILIPKPLESDVVLDV--QQIACGYRHIALTTR 272
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G+V +WG GRLGHG ++ I P+L++ L V+ A G H+ +
Sbjct: 273 QGEVFAWGEELGGRLGHGTDADI---------SRPKLVEALAVSNVEYIACGEFHTCAVT 323
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGEL 309
+G +Y +GD + L G A P +S +V+ CG +H+ + TS G++
Sbjct: 324 ASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKV 383
Query: 310 YTWGSNENGCLGIG 323
+T+G G LG G
Sbjct: 384 FTFGDGTFGALGHG 397
>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
rubripes]
Length = 531
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV+ SA + +ACG H++ LT++G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTDSGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISG-LKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S L+ V V I G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P ++ L G+ +Q G+ S+A+T G + +WGA G+LG G +S+ L
Sbjct: 218 NGNQL--TPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E + V+IAA H SA ++G+VY++G
Sbjct: 276 PV--------QIMTEKERI-VEIAACHSTHTSAAKTQSGQVYMWG 311
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 22/242 (9%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSA 137
G H L TE G ++A G N + QLG + + P+ +S L ++V +++ G HHS A
Sbjct: 84 GPHILLATEDGELFAWGHNGYSQLG-NGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMA 142
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGG 196
+T GE+Y WG N+ GQ+G G A + P P +V CL G S+AV G
Sbjct: 143 LTDSGEVYAWGYNNCGQVGSGSTANQ--PTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNG 200
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V WG G+G+LG G + L TP + L+G+ V+ +G+ HS + +
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQL---------TPCRLVALQGLCVQQVVSGYAHSLALTDE 251
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVL-TSGGELYT 311
G +Y +G ++ GN + + S + + E +V C HT T G++Y
Sbjct: 252 GLLYAWGANTYGQL--GTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYM 309
Query: 312 WG 313
WG
Sbjct: 310 WG 311
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 16/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
+++T VYA GLN LG ++ ++ P ++ L ++VV +S G H T D
Sbjct: 35 IYITSDDEVYAFGLNCSNCLGTGDS-QCTIVPKKVDILSGRKVVSLSYGSGPHILLATED 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GEL+ WG N QLG G V P+ L+ T + A G S+A+T G+V +W
Sbjct: 94 GELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVT-EVACGSHHSMALTDSGEVYAW 152
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVY 260
G G++G G + ++ TPR + +V ++ G S + +NG VY
Sbjct: 153 GYNNCGQVGSGS---------TANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVY 203
Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENG 318
+G ++ L GN L++ + V GY H+ LT G LY WG+N G
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGANTYG 263
Query: 319 CLGIG 323
LG G
Sbjct: 264 QLGTG 268
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ P +S ++K V T + + IT D E+Y +G N + LG G ++P KV+
Sbjct: 13 MSPQELSTIRKAYV-FGTSANEAIYITSDDEVYAFGLNCSNCLGTGDSQCTIVP--KKVD 69
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
LSG K +L + + T G++ +WG G +LG+G + + P
Sbjct: 70 ILSG--RKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQGVA---------P 118
Query: 230 RLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------ 282
L+ L KV A G HS + ++G VY +G ++ G+ A +P+
Sbjct: 119 VLVSATLLNRKVTEVACGSHHSMALTDSGEVYAWGYNNCGQV--GSGSTANQPTPRRVSS 176
Query: 283 -LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +++ S +VCG + + GE+Y WG N NG LG+G
Sbjct: 177 CLQNRVAVS--IVCGQTSSLAVVDNGEVYGWGYNGNGQLGLG 216
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P A + ++ + G AH+L LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P++I K+ +V+I+ + H S+A T G++YMWG+ GQ
Sbjct: 265 LG-TGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SIILPYLTHFGCTDDVF 333
>gi|418730551|ref|ZP_13289045.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. UI 12758]
gi|410774760|gb|EKR54764.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. UI 12758]
Length = 506
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 131 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 188
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 189 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 247 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 361 ALTSDGKIYSWGLNASGQLGIG 382
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 202 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 318
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 319 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 429 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 316 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 132/289 (45%), Gaps = 19/289 (6%)
Query: 31 ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTET 89
I +TL + +L G G LG+G S P + +F + +L+ G G H L LT+
Sbjct: 59 IFTTLDEKVYSL-GTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQD 117
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
G VY+ G N + QLG + L + +VVQI+ G HHS A+T +GE+Y WG
Sbjct: 118 GGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTTEGEVYTWGY 177
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N+ GQ+G G A + P C+ G S+ VT G+V SWG G+G+L
Sbjct: 178 NNCGQIGSGSTANQGSPRKVTA-CIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQL 236
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
G G + ++ P + L+GV + G+ H+ + +NG V+ +G + +
Sbjct: 237 GVG---------NNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQ 287
Query: 270 MLFQEGNHARRPSLISKLPYSEEVVC-----GGYHTCVLTSGGELYTWG 313
+ GN A + + VVC + + G +Y WG
Sbjct: 288 L--GSGNKANTCTPLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMWG 334
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 111/245 (45%), Gaps = 17/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
+F T VY+ G N G LG+ +N SLEP + ++++ +S G H +T D
Sbjct: 59 IFTTLDEKVYSLGTNTSGCLGVGDN-SSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQD 117
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G +Y WG NS QLG G + P + + Q A G S+A+T G+V +W
Sbjct: 118 GGVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVV--QIACGSHHSMALTTEGEVYTW 175
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVY 260
G G++G G + ++ +PR + G K I G S C+ ++G VY
Sbjct: 176 GYNNCGQIGSGS---------TANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVY 226
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+G ++ + P ++ L +VVCG H LT G ++ WG+N G
Sbjct: 227 SWGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYG 286
Query: 319 CLGIG 323
LG G
Sbjct: 287 QLGSG 291
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG+G+ ++ P +A + + + CG AH L LT+ G V+ G N +GQ
Sbjct: 228 WGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQ 287
Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS-TGYHHSSAI-TVDGELYMWGKNSNGQLGLGKK 160
LG S N + PL+++ VV ++ T Y HSSA G +YMW GQL ++
Sbjct: 288 LG-SGNKANTCTPLQVATRIGRVVCLAATHYSHSSAARNQSGHIYMW-----GQL---RQ 338
Query: 161 AAKVIPIPTKVECLSGIF 178
A P PT L+ +F
Sbjct: 339 QATPEPKPTNFTDLNAVF 356
>gi|24215198|ref|NP_712679.1| regulator of chromosome condensation [Leptospira interrogans
serovar Lai str. 56601]
gi|386074505|ref|YP_005988822.1| regulator of chromosome condensation [Leptospira interrogans
serovar Lai str. IPAV]
gi|418724863|ref|ZP_13283647.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. UI 12621]
gi|421119288|ref|ZP_15579612.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. Brem 329]
gi|24196276|gb|AAN49697.1| regulator of chromosome condensation [Leptospira interrogans
serovar Lai str. 56601]
gi|353458294|gb|AER02839.1| regulator of chromosome condensation [Leptospira interrogans
serovar Lai str. IPAV]
gi|409961760|gb|EKO25503.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. UI 12621]
gi|410347918|gb|EKO98769.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. Brem 329]
Length = 506
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 131 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 188
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 189 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 247 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 361 ALTSDGKIYSWGLNASGQLGIG 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 202 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 318
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 319 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 429 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 316 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
Length = 516
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 36/293 (12%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
G G YGRLG G+ S P++ F K L G+ H++ + + G ++ G D+G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYG 244
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG ++ L + + +V G+ HS+A+ G LYMWG+ G+LGLG
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDAL 304
Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
+ +P+ P E Q GF +V ++ G+ V S+GA +G+LGHG
Sbjct: 305 QRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGD----- 353
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------DRAVDKMLF 272
+ ++ P++I L+G+ + AAG SA + G +Y++G + + D+
Sbjct: 354 ----TNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFM 409
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ L ++ G H LT G ++TWG+N+NG G G
Sbjct: 410 -------LPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTG 455
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 15/224 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G ++ P + A + CG H+ + + G +Y G D+G+
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGR 297
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKA 161
LG+ + + S+ P+++ + +E Q+ G++H+ ++ DG ++ +G NG+LG G
Sbjct: 298 LGLGDALQRSV-PVQVPDI-REASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTN 355
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P ++ L G+ Q A G + S AVT G + WG G G E+ +L
Sbjct: 356 RQF--RPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFML--- 410
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
P++++ L G V A G H + ++G V+ +G+
Sbjct: 411 -------PKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNN 447
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDF 100
+WG GDYGRLGLG R PV + S + CG HT+ L+ G V++ G +
Sbjct: 289 MWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAEN 346
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + P I L+ + QI+ G S+A+T +G LY+WG LG G
Sbjct: 347 GKLGHGDT-NRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNG- 402
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + +P V LSG A+G VA+T G V +WG +G+ G G G
Sbjct: 403 SSDETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGS-----G 457
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
TS P++++ L G ++ AG H+
Sbjct: 458 MATYTS---PQMVQGLHGAGIQQVTAGTTHT 485
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 14/234 (5%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
V+ G N QL + L P +S K V+ ++ G + + A+ +G + GK S
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK-VMSMTAGQYCTFAVLSNGTVMANGKGS 189
Query: 152 NGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G+LG G A+ PI + + I T + + G S+A+ G++ +WG G G+LG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSIAIGKNGQIWTWGDGDYGKLG 247
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
HG ST++ +P+LI+ L + A G HSA + + G +Y++G+ ++
Sbjct: 248 HGD---------STTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRL 298
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIG 323
+ P + + + +VVCG HT VL++ G ++++G+ ENG LG G
Sbjct: 299 GLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHG 352
>gi|421116180|ref|ZP_15576568.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410012184|gb|EKO70287.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
Length = 506
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 131 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 188
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 189 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 247 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 361 ALTSDGKIYSWGLNASGQLGIG 382
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 202 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 318
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 319 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 429 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 316 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|417770001|ref|ZP_12417914.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Pomona str. Pomona]
gi|418682056|ref|ZP_13243276.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|418708883|ref|ZP_13269683.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|400326066|gb|EJO78335.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|409948018|gb|EKN98009.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Pomona str. Pomona]
gi|410770813|gb|EKR46026.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|455670426|gb|EMF35408.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Pomona str. Fox 32256]
gi|456967262|gb|EMG08660.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Grippotyphosa str. LT2186]
Length = 506
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 131 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 188
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 189 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 247 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 361 ALTSDGKIYSWGLNASGQLGIG 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 202 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 318
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 319 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 429 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 316 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|455789676|gb|EMF41593.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Lora str. TE 1992]
Length = 506
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 131 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 188
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 189 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 247 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 361 ALTSDGKIYSWGLNASGQLGIG 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 202 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 318
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 319 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 429 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 316 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|421124305|ref|ZP_15584565.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421136680|ref|ZP_15596778.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410019138|gb|EKO85965.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410438224|gb|EKP87320.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
Length = 506
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 131 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 188
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 189 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 247 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 361 ALTSDGKIYSWGLNASGQLGIG 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 202 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 318
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 319 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 429 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 316 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|417783645|ref|ZP_12431363.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. C10069]
gi|418703959|ref|ZP_13264841.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|418711972|ref|ZP_13272720.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. UI 08452]
gi|409953269|gb|EKO07770.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. C10069]
gi|410766443|gb|EKR37128.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|410791551|gb|EKR85224.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. UI 08452]
Length = 506
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 131 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 188
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 189 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 247 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 361 ALTSDGKIYSWGLNASGQLGIG 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 202 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 318
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 319 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 429 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 316 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
magnipapillata]
Length = 1020
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 135/291 (46%), Gaps = 21/291 (7%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+L G+ P F +K CG T+ LTE+G VY+ G + +G LG
Sbjct: 518 GQLCHGNRAMYRTPKRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGI 577
Query: 109 IGYS-LEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA----A 162
G + L P++I L K +VV I+ G H A+T G +Y WG +G+LGLG +
Sbjct: 578 YGSNVLTPIKIDALSKLKVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQNDFNLP 637
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+++ +P K + I G + + +T G +L++G +L Q S G
Sbjct: 638 QLVTLPEKYNYIVKI-----TCGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTD 692
Query: 223 STSEYT-------PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+S P ++ L ++ A+G HSA +DE GR+ FG ++ +
Sbjct: 693 KSSTQQKVSYVTLPTPVRPLRSYRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGDY 752
Query: 276 NHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
PSL+S L +EV CG T V T+ ++++WG ENG LG+
Sbjct: 753 QSRNFPSLVSGLLNGKEVTICNCGDNFTVVATADNQIFSWGCGENGRLGLN 803
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 26/189 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
WGNG++GRLGLG+ P + + EK++ + + CG +T LT G + A G N+
Sbjct: 618 WGNGEHGRLGLGNQNDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNGHLLAFGNNECN 677
Query: 102 QLGISENI---------------GYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELY 145
+L +++ I Y P + L+ +V +++G HS+ + G L
Sbjct: 678 KLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSYRIVSMASGKSHSAVVDEFGRLL 737
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAAL---GFEQSVAVTGGGKVLSW 201
+G N+ G+LGLG ++ P +SG+ K+ + G +V T ++ SW
Sbjct: 738 TFGSNTFGELGLGDYQSRNFP-----SLVSGLLNGKEVTICNCGDNFTVVATADNQIFSW 792
Query: 202 GAGGSGRLG 210
G G +GRLG
Sbjct: 793 GCGENGRLG 801
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 126 VQISTGYHHSSAITVDGELYMW-----GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+++S G+ H + +T++ ELY W G GQL G +A + P +V+ +GI K
Sbjct: 486 IEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRA--MYRTPKRVDFFTGIPIK 543
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
QA G + ++ +T G V S G+ G LG I G ++ TP I L +KV
Sbjct: 544 QAVCGEDFTIILTESGDVYSCGSDYYGCLGC---EGIYG----SNVLTPIKIDALSKLKV 596
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGG 297
A G H + G VY +G+ ++ N P L++ K Y ++ CG
Sbjct: 597 VSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQNDFNLPQLVTLPEKYNYIVKITCGR 656
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
+T +LTS G L +G+NE L +
Sbjct: 657 DNTFILTSNGHLLAFGNNECNKLALN 682
>gi|417762592|ref|ZP_12410581.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. 2002000624]
gi|417775095|ref|ZP_12422955.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. 2002000621]
gi|418671556|ref|ZP_13232907.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. 2002000623]
gi|409941585|gb|EKN87213.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. 2002000624]
gi|410575192|gb|EKQ38214.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. 2002000621]
gi|410581515|gb|EKQ49325.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans str. 2002000623]
Length = 506
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 131 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 188
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 189 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 246
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 247 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 300
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 301 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 360
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 361 ALTSDGKIYSWGLNASGQLGIG 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 202 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 259
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 318
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 319 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 376
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 377 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 428
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 429 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 316 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 373
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 374 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 433
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 434 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 487
>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 747
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G G+ + +PV + A++ G H+L L G V+A G N +GQ
Sbjct: 472 WGVNSRGEVGDGTNANTSQPVRVLGLS--GITAISAGAYHSLALRTDGTVWAWGFNRYGQ 529
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + +P++++GL V I+ G+ HS A+ DG ++ WG N +GQ+G G
Sbjct: 530 LGNGGTVDQN-QPVQVAGLSG-VTAIAAGHSHSLALCGDGTVWAWGYNFDGQIGSGTNNW 587
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++P+ + LS + A G S+A+ G V SWG GSG+LG+G +S+
Sbjct: 588 HILPV--QAVGLSSVTAITA--GGYHSLALRSDGTVWSWGYNGSGQLGNGALASL----- 638
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L GV V I AAG HS + +G V +G ++ + P
Sbjct: 639 ----NAPGPVSNLTGV-VSI-AAGDYHSLALRSDGTVRAWGFNFDGQIGDGSLTNRHVPV 692
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+++ + V+ G +H+ + S G + WG+N G LG G
Sbjct: 693 MVAGMSGVVSVIAGDHHSMAMRSDGTTWAWGANTEGQLGDG 733
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G++ +R P+ + L+ G +H + L G + GLN GQ
Sbjct: 224 WGDNRSGQLGDGTVTTRGNPLQVLGLT--GVVTLSAGASHCVALRSNGTAWTWGLNTMGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S+ P ++ GL +V+ G +HS A+ DG ++ WG N QLG G +
Sbjct: 282 LGDGTTTQRSV-PAQV-GLT-DVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQLGNGNMTS 338
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
++PI LSG T A GF+ S+ + G V SWG G+LG G
Sbjct: 339 SLLPIQAG---LSGGITLVA--GFKHSLTLRADGTVWSWGDNVFGQLGDG---------- 383
Query: 223 STSEYTPRLIKELEGVKVKIA---------AAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
Y PR+ V++A A+G LHS D GRV+ +GD ++
Sbjct: 384 ---TYQPRM------SPVRVATTTLGNPGVASGQLHSVYRDSAGRVWSWGDNEDGQLGNG 434
Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G P+L + L + VV G HT VL ++ WG N G +G G
Sbjct: 435 IGADKLTPAL-TGLTGAVSVVAGNRHTVVLKGDTTVWAWGVNSRGEVGDG 483
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 130/285 (45%), Gaps = 28/285 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ + G+LG G + P + S+ A G HT+ L V+A G+N G+
Sbjct: 423 WGDNEDGQLGNGIGADKLTPALTGLTGAVSVVA---GNRHTVVLKGDTTVWAWGVNSRGE 479
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G N S +P+R+ GL + IS G +HS A+ DG ++ WG N GQLG G
Sbjct: 480 VGDGTNANTS-QPVRVLGLSG-ITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNGGTVD 537
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V LSG+ A G S+A+ G G V +WG G++G G
Sbjct: 538 QNQPV--QVAGLSGV--TAIAAGHSHSLALCGDGTVWAWGYNFDGQIGSG---------- 583
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA---- 278
T+ + ++ + V AG HS + +G V+ +G ++ GN A
Sbjct: 584 -TNNWHILPVQAVGLSSVTAITAGGYHSLALRSDGTVWSWGYNGSGQL----GNGALASL 638
Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S L + G YH+ L S G + WG N +G +G G
Sbjct: 639 NAPGPVSNLTGVVSIAAGDYHSLALRSDGTVRAWGFNFDGQIGDG 683
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 129/284 (45%), Gaps = 27/284 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG GS PV + ++A G AH+ L G V+A G N + Q
Sbjct: 124 WGDNYSGQLGTGSTAVSAEPVQVQGLS--GVLSVASGFAHSAALRSDGTVWAWGDNRYRQ 181
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG G S P+++ GL V+ ++ G + + A+ DG ++ WG N +GQLG G
Sbjct: 182 LG-PLTAGSSSVPVQVPGLGG-VIAVAAGGNTTLALRADGTVWAWGDNRSGQLGDGTVTT 239
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V L+G+ T A G VA+ G +WG G+LG G
Sbjct: 240 RGNPL--QVLGLTGVVTLSA--GASHCVALRSNGTAWTWGLNTMGQLGDGT--------- 286
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T P + + V A AG HS + +G V+ +G D Q GN S
Sbjct: 287 TTQRSVPAQVGLTD---VMAAVAGNYHSLAVRSDGAVWAWG----DNRYRQLGNGNMTSS 339
Query: 283 LI---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L+ + L +V G H+ L + G +++WG N G LG G
Sbjct: 340 LLPIQAGLSGGITLVAGFKHSLTLRADGTVWSWGDNVFGQLGDG 383
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 25/258 (9%)
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
+ S+ L+ G H++ + G V+A G N GQLG + S P+++ L + V ++
Sbjct: 49 RASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLG-NGLFTNSPTPVKVKNLT-DAVAVA 106
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
+G HS A+ DG ++ WG N +GQLG G A P+ +V+ LSG+ + A GF S
Sbjct: 107 SGDSHSLALRSDGTVWAWGDNYSGQLGTGSTAVSAEPV--QVQGLSGVLS--VASGFAHS 162
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+ G V +WG LG L + S P + L GV + +AA G
Sbjct: 163 AALRSDGTVWAWGD---------NRYRQLGPLTAGSSSVPVQVPGLGGV-IAVAAGGNT- 211
Query: 250 SACIDENGRVYIFGDRAV----DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
+ + +G V+ +GD D + GN P + L + G H L S
Sbjct: 212 TLALRADGTVWAWGDNRSGQLGDGTVTTRGN----PLQVLGLTGVVTLSAGASHCVALRS 267
Query: 306 GGELYTWGSNENGCLGIG 323
G +TWG N G LG G
Sbjct: 268 NGTAWTWGLNTMGQLGDG 285
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+L S P S + ++A G H+L L G V A G N GQ
Sbjct: 622 WGYNGSGQLGNGALASLNAPGPVSNLT--GVVSIAAGDYHSLALRSDGTVRAWGFNFDGQ 679
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
+G ++ P+ ++G+ VV + G HHS A+ DG + WG N+ GQLG G +
Sbjct: 680 IG-DGSLTNRHVPVMVAGMSG-VVSVIAGDHHSMAMRSDGTTWAWGANTEGQLGDGTRND 737
Query: 163 KVIPIPTKVECL 174
+IP+ +VE
Sbjct: 738 SIIPV--RVELF 747
>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
KIAA1239-like [Oreochromis niloticus]
Length = 2697
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 130/255 (50%), Gaps = 12/255 (4%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
S+ A+ACG H L ++ +G V++ G + GQLG+ S P ++ + Q++
Sbjct: 1762 SVVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVAC 1821
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G HS A+T G+++ WG NS+GQLGLGK+ V P + L+G+ Q A G S+
Sbjct: 1822 GNSHSLALTKGGDVFSWGLNSHGQLGLGKEVP-VQHTPVIICALAGVAVTQIAAGGTHSL 1880
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V GA G+LG + + + ++ L + V + G HS
Sbjct: 1881 FLTLADLVYCCGANKCGQLG-------VNRVDEKGRFNICMVPALRPLSVSFISCGESHS 1933
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGE 308
A + ++G+VY FGD + ++ + +P L++ L P S ++ CG +HT VL S G+
Sbjct: 1934 AVLTKDGKVYTFGDGSQGQLGHSTSANEVKPKLVAGLDGPAS-QIACGRHHTLVLGSSGQ 1992
Query: 309 LYTWGSNENGCLGIG 323
L+ +GS G G G
Sbjct: 1993 LWAFGSGAKGQTGNG 2007
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 128/293 (43%), Gaps = 40/293 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+ G + S V K + CG HTLFL G V + G N GQ
Sbjct: 1688 WGDSSSGQFGPQAAPSPVSWTVPGVITK-----ICCGDRHTLFLNADGNVLSCGHNSQGQ 1742
Query: 103 LGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
LG + I +E L VV ++ G H A++ G ++ WG +GQLGL
Sbjct: 1743 LGRQKKKNGKIIAQVEAL------GSVVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLL 1796
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ P+KV I Q A G S+A+T GG V SWG G+LG G+E +
Sbjct: 1797 PTPSSS-HRPSKVPIPLPIPIIQVACGNSHSLALTKGGDVFSWGLNSHGQLGLGKEVPV- 1854
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------DRAVDK 269
++TP +I L GV V AAG HS + VY G +R +K
Sbjct: 1855 -------QHTPVIICALAGVAVTQIAAGGTHSLFLTLADLVYCCGANKCGQLGVNRVDEK 1907
Query: 270 MLFQEGNHARRPSLISKLPYSEEVV-CGGYHTCVLTSGGELYTWGSNENGCLG 321
F N P+L P S + CG H+ VLT G++YT+G G LG
Sbjct: 1908 GRF---NICMVPAL---RPLSVSFISCGESHSAVLTKDGKVYTFGDGSQGQLG 1954
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 98/201 (48%), Gaps = 29/201 (14%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG + + PV+ A ++ +A GG H+LFLT VY G N G
Sbjct: 1838 WGLNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLADLVYCCGANKCG 1897
Query: 102 QLGISE-------NIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
QLG++ NI +L PL +S IS G HS+ +T DG++Y +G S
Sbjct: 1898 QLGVNRVDEKGRFNICMVPALRPLSVSF-------ISCGESHSAVLTKDGKVYTFGDGSQ 1950
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG A +V P V L G Q A G ++ + G++ ++G+G G+ G+G
Sbjct: 1951 GQLGHSTSANEVKP--KLVAGLDGP-ASQIACGRHHTLVLGSSGQLWAFGSGAKGQTGNG 2007
Query: 213 QESSILGFLRSTSEYTPRLIK 233
S L TP L++
Sbjct: 2008 HNDSCL---------TPTLVQ 2019
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 60/321 (18%)
Query: 44 GNGDYGRLGLGS----LESRWRPVVCS-AFEKHSLKA-LACGGAHTLFLT-----ETGC- 91
NG Y L + S L + R +CS E +KA L G + ++T E GC
Sbjct: 1548 SNGSYALLSIDSGAINLLNLSRVTLCSFKVEGPVIKACLDKTGRYVAYITTPSGLEDGCD 1607
Query: 92 --VYATGLNDFGQLGISENIG---YSLEPLRISGLKKEVVQI-----STGYHHSSAITVD 141
++A + +L E +G S PL + ++ V + S G ++ S +TVD
Sbjct: 1608 CYLHARPILQVMRLSDGERLGAVHLSKNPLALVICEQHCVFVGFGDGSVGVYYISDVTVD 1667
Query: 142 GE---------------LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ L+ WG +S+GQ G + P P + G+ TK G
Sbjct: 1668 EDEPIRCWEDPSGGDMQLFCWGDSSSGQFG-----PQAAPSPVSW-TVPGVITK-ICCGD 1720
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AA 245
++ + G VLS G G+LG ++ + ++I ++E + +A A
Sbjct: 1721 RHTLFLNADGNVLSCGHNSQGQLGRQKKKN------------GKIIAQVEALGSVVAMAC 1768
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLI--SKLPYSEEVVCGGYHTCV 302
G H + +G V+ +G ++ L + + RPS + +V CG H+
Sbjct: 1769 GQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLA 1828
Query: 303 LTSGGELYTWGSNENGCLGIG 323
LT GG++++WG N +G LG+G
Sbjct: 1829 LTKGGDVFSWGLNSHGQLGLG 1849
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 131/272 (48%), Gaps = 19/272 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG L+S P A + +L+ G G H T G V++ G N + QLG +
Sbjct: 52 GCLGLGDLQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +S L K V++++ G HH+ A+T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P P +V CL A G S+AV G++ WG +G+LG G
Sbjct: 169 PTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNG--------- 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+GV V A G+ H+ + + G VY +G + ++ + P+LI
Sbjct: 220 NQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQALPTLI 279
Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K +E C HT T G++ WG
Sbjct: 280 NTDKERMAEVAACHTSHTSAAKTQSGQVLMWG 311
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P +V + + +ACG HT+ LT G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++ L G+ Q A G+ ++A+T G V +WGA G+LG G +
Sbjct: 218 NGNQ--QTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKC---- 271
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ P LI + ++AA H SA ++G+V ++G
Sbjct: 272 -----NQALPTLINTDKERMAEVAACHTSHTSAAKTQSGQVLMWG 311
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 117/245 (47%), Gaps = 16/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITVD 141
+++T V+A G N G LG+ + + ++EP RI L K++V +S G H + T D
Sbjct: 35 IYVTVNDEVFALGTNCSGCLGLGD-LQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATAD 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N QLG G + P L G + A G ++A+T G+V +W
Sbjct: 94 GEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLL-GKRVIEVACGSHHTIALTTDGEVFAW 152
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVY 260
G SG++G G + ++ TPR + L+ V A G L S + ++G +Y
Sbjct: 153 GYNNSGQVGSGS---------TANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIY 203
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+G ++ + + P I+ L +V CG HT LT G +Y WG+N G
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYG 263
Query: 319 CLGIG 323
LG G
Sbjct: 264 QLGTG 268
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + S+ +ACG AHTL LT+ G VYA G N +GQ
Sbjct: 205 WGYNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG +L P I+ K+ + +++ + H S+A T G++ MWG+
Sbjct: 265 LGTGNKCNQAL-PTLINTDKERMAEVAACHTSHTSAAKTQSGQVLMWGQ 312
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 14/217 (6%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
++L P L ++ + + + +TV+ E++ G N +G LGLG + + P
Sbjct: 10 FALLPPEELRLIRQACVFGSAANEAIYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRID 69
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
C I + G ++A T G+V SWG G +LG+G + L TP
Sbjct: 70 ALCGKKIVSLSYGTGPHVAIA-TADGEVFSWGHNGYSQLGNGTTNHGL---------TPA 119
Query: 231 LIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
L+ L G +V A G H+ + +G V+ +G ++ + P +S
Sbjct: 120 LVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQ 179
Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ VV CG + + GE+Y WG N NG LG+G
Sbjct: 180 NKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLG 216
>gi|456825316|gb|EMF73712.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Canicola str. LT1962]
Length = 430
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 55 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 112
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 113 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 170
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 171 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 224
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 225 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 284
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 285 ALTSDGKIYSWGLNASGQLGIG 306
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 132/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 126 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 183
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 184 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 242
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 243 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 300
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T + + + AG S I +NG V +G +
Sbjct: 301 GQLGIGGNGNPPPTPIPTQILNIQDVASI--------WAGGTQSFAILKNGEVKGWGANG 352
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 353 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGSGEIYGWGWNFKGSLG 411
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 240 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 297
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 298 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 357
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 358 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGSGEIYGWGWNFKGSLG 411
>gi|428185814|gb|EKX54666.1| hypothetical protein GUITHDRAFT_40316, partial [Guillardia theta
CCMP2712]
Length = 272
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 17/282 (6%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ D+G+LG+ + + V F+ ++ +ACG AH++ L++ G V+ G N G
Sbjct: 5 WGDNDFGQLGVSEQMMNHSLTDVQQTFDLR-VEDMACGSAHSVILSD-GKVFTWGQNKHG 62
Query: 102 QLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S+ +G SL P + K VQ++ GY+ S A+T GE++++G+ +G L G
Sbjct: 63 QLGHGPSDYLG-SLGPTAKTDGK--CVQVAAGYNFSMALTDRGEIFVFGEGRHGVLAQGD 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +K P + G + G + G+ L+WG G G+LGH
Sbjct: 120 ELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRYGQALTWGCGSDGQLGHSSRD---- 175
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
E+ PR ++ L V V+ + G H+ + + +Y G+ K+ +
Sbjct: 176 -----DEHFPRKVEHLANVSVRTISCGSKHTCFLTSDNSLYTCGNGKDGKLGHGDERSYL 230
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
P + L +EV CG YHT + +YT+GS G LG
Sbjct: 231 YPKKVETLQAVKEVSCGDYHTACIDGKSIIYTFGSGTRGQLG 272
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 112/238 (47%), Gaps = 25/238 (10%)
Query: 94 ATGLNDFGQLGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
A G NDFGQLG+SE + +SL ++ + V ++ G HS I DG+++ WG+N +
Sbjct: 4 AWGDNDFGQLGVSEQMMNHSLTDVQQT-FDLRVEDMACGSAHS-VILSDGKVFTWGQNKH 61
Query: 153 GQLGLGKKA--AKVIPIP-TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
GQLG G + P T +C+ Q A G+ S+A+T G++ +G G G L
Sbjct: 62 GQLGHGPSDYLGSLGPTAKTDGKCV------QVAAGYNFSMALTDRGEIFVFGEGRHGVL 115
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
G E S+ +P++I L G V G H ACI G+ +G +
Sbjct: 116 AQGDE---------LSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRYGQALTWGCGSD 166
Query: 268 DKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ + P + L + CG HTC LTS LYT G+ ++G LG G
Sbjct: 167 GQLGHSSRDDEHFPRKVEHLANVSVRTISCGSKHTCFLTSDNSLYTCGNGKDGKLGHG 224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+L WG N GQLG+ ++ T V+ + + A G SV ++ GKV +WG
Sbjct: 1 KLVAWGDNDFGQLGVSEQMMN--HSLTDVQQTFDLRVEDMACGSAHSVILS-DGKVFTWG 57
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G+LGHG S LG L T++ + ++ AAG+ S + + G +++F
Sbjct: 58 QNKHGQLGHG-PSDYLGSLGPTAKTDGKCVQ---------VAAGYNFSMALTDRGEIFVF 107
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWGSNENG 318
G+ + + P +I L +++ CG H + G+ TWG +G
Sbjct: 108 GEGRHGVLAQGDELSKSSPQVIDSLSVPGYVVDKIFCGERHCACIVRYGQALTWGCGSDG 167
Query: 319 CLG 321
LG
Sbjct: 168 QLG 170
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG G G+LG S + P S++ ++CG HT FLT +Y G
Sbjct: 158 ALTWGCGSDGQLGHSSRDDEHFPRKVEHLANVSVRTISCGSKHTCFLTSDNSLYTCGNGK 217
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LG + Y L P ++ L+ V ++S G +H++ I +Y +G + GQLG
Sbjct: 218 DGKLGHGDERSY-LYPKKVETLQA-VKEVSCGDYHTACIDGKSIIYTFGSGTRGQLG 272
>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 131/303 (43%), Gaps = 35/303 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + +++ +ACG HT +T +G +Y G +++
Sbjct: 314 WGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNY 373
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P ++SG + V IS G H++ +T G+L+ +G S G LG G
Sbjct: 374 GLLGHGSEVSHWI-PQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHG 432
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------------GGGKVLSWGA 203
P +VE L G+ T + A G + A K+ +WG
Sbjct: 433 DHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGD 490
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G GRLGHG L P + L ++ A G + + GRVY G
Sbjct: 491 GDKGRLGHGDNEPRL---------VPECVAALMEERICQVACGNDLTVALTTAGRVYTMG 541
Query: 264 DRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
A ++ N + P+ + + EEV CG YH VLTS E+YTWG NG L
Sbjct: 542 STAYGQLGSATAN-GKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQL 600
Query: 321 GIG 323
G G
Sbjct: 601 GHG 603
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 40/293 (13%)
Query: 55 SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENI 109
SL S+ ++ A E + +ACGG H + +T G +++ G G+L G+ ++
Sbjct: 271 SLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV 330
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPI 167
+ +SG E+V + G +H+ A+T+ G+LY WG ++ G LG G + + IP
Sbjct: 331 SHPKIIDTLSGTNVELV--ACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQ 388
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+ + GI + G + VT G++ ++G G G LGHG TS +
Sbjct: 389 KVSGQ-MEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDH--------ITSNF 439
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDE---------------NGRVYIFGDRAVDKMLF 272
PR ++ L G++ A G H+A E + ++Y +GD DK
Sbjct: 440 -PREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDG--DKGRL 496
Query: 273 QEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
G++ R P ++ L +V CG T LT+ G +YT GS G LG
Sbjct: 497 GHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG 549
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 124/288 (43%), Gaps = 45/288 (15%)
Query: 43 WGNG--DYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G +YG LG GS S W P V E + ++CG HT +T G ++ G
Sbjct: 366 WGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGS 425
Query: 100 FGQLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL----------- 144
FG LG I+ N +E LR GL+ V +H ++A+ EL
Sbjct: 426 FGALGHGDHITSNFPREVETLR--GLRTTKVACGV-WHTAAAVEAINELSDSGTSASPSS 482
Query: 145 ---YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTGGGKV 198
Y WG G+LG G +++P EC++ + + Q A G + +VA+T G+V
Sbjct: 483 RKLYTWGDGDKGRLGHGDNEPRLVP-----ECVAALMEERICQVACGNDLTVALTTAGRV 537
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENG 257
+ G+ G+LG + L P ++ E+ V+ A G H A +
Sbjct: 538 YTMGSTAYGQLGSATANGKL----------PTCVEGEIANSFVEEVACGSYHVAVLTSKN 587
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
VY +G ++ + NH P+++ L + V CG T V+
Sbjct: 588 EVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVI 635
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ----ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
++G ++ L+ L L+ VV I+ G H+ +T GE++ WG+ S G+LG
Sbjct: 264 NKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLG 323
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQE 214
G +A + P ++ LSG + A G + AVT G + +WG G G LGHG E
Sbjct: 324 HGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSE 381
Query: 215 SSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+ + ++EG++V + G H+A + G+++ FGD + +
Sbjct: 382 ---------VSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHG 432
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLT---------------SGGELYTWGSNE 316
+ + P + L + +V CG +HT S +LYTWG +
Sbjct: 433 DHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGD 492
Query: 317 NGCLGIG 323
G LG G
Sbjct: 493 KGRLGHG 499
>gi|198421655|ref|XP_002121487.1| PREDICTED: similar to hect domain and RLD 4 [Ciona intestinalis]
Length = 1029
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 125/263 (47%), Gaps = 20/263 (7%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV 125
SA E + +A G +H L + + G VY G ND QLG ++ Y P +I L ++
Sbjct: 72 SALETVHIVDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTDGNCYP-SPKKIKSLSNKI 130
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
VQ++ G+ HS + +G L+ G N+ GQLG G K++ + + L GI Q + G
Sbjct: 131 VQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTEL---RPLISLKGIPFSQISAG 187
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F S VT G V WG +G+LG G P L+K L + VK A
Sbjct: 188 FWHSFCVTHSGAVFCWGRNDNGQLGLGD---------CVDRNVPVLLKALRSLSVKYICA 238
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLF----QEGNHARRPSLISKLPYSE--EVVCGGYH 299
G LH+A + +G V+ FG ++ E P I +L +E ++ CG H
Sbjct: 239 GELHTAALTLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQIACGAQH 298
Query: 300 T-CVLTSGGELYTWGSNENGCLG 321
T C + G +YT+G+N + LG
Sbjct: 299 TVCYVGKTGNVYTFGNNNHSQLG 321
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 118/252 (46%), Gaps = 21/252 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D +LG P + + + +ACG +H+LFL G +++ G N++GQ
Sbjct: 101 WGGNDKDQLGWTDGNCYPSPKKIKSL-SNKIVQVACGHSHSLFLGSNGALWSAGSNNYGQ 159
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L PL IS QIS G+ HS +T G ++ WG+N NGQLGLG
Sbjct: 160 LGFGDKSSTELRPL-ISLKGIPFSQISAGFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVD 218
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ K L + K G + A+T G V ++G+ G+LGHG
Sbjct: 219 RNVPVLLK--ALRSLSVKYICAGELHTAALTLDGGVFTFGSNQFGQLGHGSSGP-----E 271
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSAC-IDENGRVYIFGDRAVDKMLFQEGNHARRP 281
TPR I EL G +V A G H+ C + + G VY FG+ NH++
Sbjct: 272 PLPVSTPRKIFELMGNEVTQIACGAQHTVCYVGKTGNVYTFGN----------NNHSQL- 320
Query: 282 SLISKLPYSEEV 293
I K P SE V
Sbjct: 321 GYIPKHPRSEFV 332
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 130/284 (45%), Gaps = 24/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+ + P + F K +K++ +FL E G V+ G +
Sbjct: 4 WGKSIIGK-SFGNGANLQVPTEINCFGKTIIKSVRVSRTIAVFLLEDGTVHTFGAEN--- 59
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+NIG+S ++S L+ +V I+ G H AI G++Y WG N QLG
Sbjct: 60 ----DNIGHSAGSTKVSALETVHIVDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTD-- 113
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P P K++ LS Q A G S+ + G + S G+ G+LG G +SS
Sbjct: 114 GNCYPSPKKIKSLSNKIV-QVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSS----- 167
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+E P + L+G+ +AGF HS C+ +G V+ +G ++ + P
Sbjct: 168 ---TELRPLI--SLKGIPFSQISAGFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNVP 222
Query: 282 SLISKL-PYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIG 323
L+ L S + +C G HT LT G ++T+GSN+ G LG G
Sbjct: 223 VLLKALRSLSVKYICAGELHTAALTLDGGVFTFGSNQFGQLGHG 266
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 10/178 (5%)
Query: 41 ALW--GNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
ALW G+ +YG+LG G S RP++ + + ++ G H+ +T +G V+ G
Sbjct: 148 ALWSAGSNNYGQLGFGDKSSTELRPLI--SLKGIPFSQISAGFWHSFCVTHSGAVFCWGR 205
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
ND GQLG+ + + ++ P+ + L+ V+ I G H++A+T+DG ++ +G N GQLG
Sbjct: 206 NDNGQLGLGDCVDRNV-PVLLKALRSLSVKYICAGELHTAALTLDGGVFTFGSNQFGQLG 264
Query: 157 LGKKAAKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGH 211
G + +P+ P K+ L G Q A G + +V G G V ++G +LG+
Sbjct: 265 HGSSGPEPLPVSTPRKIFELMGNEVTQIACGAQHTVCYVGKTGNVYTFGNNNHSQLGY 322
>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
castellanii str. Neff]
Length = 395
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 143/300 (47%), Gaps = 31/300 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVV-CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G G +G LG G ++ + A E H + A++ GG H+L LTE G V++ G G+
Sbjct: 9 GGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGR 68
Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG N EP RI+ V +IS G HS A+T DG+ Y +G G+LG G +
Sbjct: 69 LG-HGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDE 127
Query: 161 AAKVI-------------PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+++ P+ +V E + + A G+ S+ +T G+V S+GAG
Sbjct: 128 TDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVM 187
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G LGHG L P +I+ L ++ A G ++ +D+ GRV+ FG
Sbjct: 188 GALGHGDRDKRL---------RPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDY 238
Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ F EG AR L S L +EE+ G H +LT G+L +G +NG LG+G
Sbjct: 239 SEFPKFTEGQ-ARFVLLPSALGLAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLG 297
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
+G G G LG G + R RP + A + ++ACG A+TL L + G V+ GL+ +F
Sbjct: 182 FGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDYSEF 241
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+ + L P + GL +E+ ++ G H +T +G+L +G NG+LGLG +
Sbjct: 242 PKF-TEGQARFVLLPSAL-GLAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDE 299
Query: 161 AAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTG----GGKVLSWGAGGSGRLGHGQ 213
++ PT V S T A G + +A+ G ++ ++G+G G+L +G
Sbjct: 300 TNRL--APTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLANGH 357
Query: 214 ESS 216
Sbjct: 358 RQD 360
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 127/309 (41%), Gaps = 41/309 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
+GNG +GRLG G+ E+ + P + F+ + + ++ G H+L LT+ G Y+ G FG
Sbjct: 61 FGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFG 120
Query: 102 QLGISENI-----------GYSLEPL---RISGLKKEVV--QISTGYHHSSAITVDGELY 145
+LG + G+ P R+ + + V ++ GY HS +T DG +Y
Sbjct: 121 RLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVY 180
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
+G G LG G + ++ PT +E L+ A G ++ + G+V +G
Sbjct: 181 SFGAGVMGALGHGDRDKRL--RPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGL-- 236
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFG 263
S F + + L+ G+ +I AG H + G++ FG
Sbjct: 237 -------DYSEFPKFTEGQARFV--LLPSALGLAEEITEVRAGEGHCLLLTREGKLLAFG 287
Query: 264 DRAVDKMLFQEGNHARRPSLIS-----KLPYSEEVVCGGYHTCVLTS----GGELYTWGS 314
++ + + P+ ++ ++ CG H L G LY +GS
Sbjct: 288 LGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGS 347
Query: 315 NENGCLGIG 323
+ G L G
Sbjct: 348 GDQGQLANG 356
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G VLS G G G LG G + L L TP I+ LE +V +AG HS + E
Sbjct: 3 GVVLSAGGGQHGSLGQGDAVTQLSVL------TP--IRALEAHRVVAVSAGGHHSLVLTE 54
Query: 256 NGRVYIFGDRAVDKMLFQEGN-----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
GRV+ FG+ ++ GN RR + ++ G H+ LT G+ Y
Sbjct: 55 EGRVFSFGNGLHGRL--GHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAY 112
Query: 311 TWGSNENGCLGIG 323
++G G LG G
Sbjct: 113 SFGFGMFGRLGHG 125
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 133/303 (43%), Gaps = 36/303 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG S P + +K +ACG A + L E G +Y G N +GQ
Sbjct: 133 WGRGESGQLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQ 192
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + ++ + S + V ++ G H +T ++Y WG NS GQLG G +
Sbjct: 193 LGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKK 252
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P V +SG+ KQ G S +T G + +WG G G+LGHG
Sbjct: 253 HCL-QPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDME------- 304
Query: 223 STSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGD-------RAVDKMLF 272
S+ P L+ L+ + ++ A F+ + +G VY +G VD M +
Sbjct: 305 --SKDIPTLLSPLDPKTQASLIVSGADFI--MAMTYSGAVYSWGRNCFGQLGHGVD-MHY 359
Query: 273 QEGNH----ARRPSLISKLPYSEE--------VVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+ N P +IS SEE + CG +H +T + L+ WG E+G
Sbjct: 360 SKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQ 419
Query: 320 LGI 322
LG+
Sbjct: 420 LGL 422
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 95/196 (48%), Gaps = 26/196 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
WG GD+G+LG G +ES+ P + S + + +L GA + +T +G VY+ G N FG
Sbjct: 290 WGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFG 349
Query: 102 QLGISENIGYS---------LEPLRISGLKKE-------VVQISTGYHHSSAITVDGE-L 144
QLG ++ YS + P IS + IS G HH AIT + L
Sbjct: 350 QLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTL 409
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT--------GGG 196
+ WG+ +GQLGL + PIP +V+ + G+ AA SV V G
Sbjct: 410 FAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDM 469
Query: 197 KVLSWGAGGSGRLGHG 212
KV SWG G G+LG+G
Sbjct: 470 KVFSWGRGSFGQLGYG 485
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 139/314 (44%), Gaps = 19/314 (6%)
Query: 15 KQDIKLGSKLGICKRWISSTLQRRFAALWGNGD-YGRLGLGSLESRWRPVVCSAFEKHSL 73
KQD+K + I +R + + + G +GR S + RP + S+
Sbjct: 55 KQDLKEALSMNIFQRARTEIAKSKLHLTAGATRIHGRF---STYNSQRPQEVVSLAGLSI 111
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY 132
K + CG H L L +G + + G + GQLG + + +S P I L + V +++ G
Sbjct: 112 KLITCGSDHVLALDASGKIRSWGRGESGQLGHA-SFSHSSTPSIIDELASQRVKEVACGV 170
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
S+A+ G+LY WG N GQLG G + + IP + ++ A G V +
Sbjct: 171 AFSAALMEGGQLYTWGCNRYGQLGQGDRTSSA--IPRMLPSMNHRHVHLMACGAAHIVVL 228
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T V +WG G+LGHG R P+ ++ + G+ +K AG HS
Sbjct: 229 TTSRDVYTWGNNSYGQLGHG--------FRKKHCLQPKSVRVMSGLDIKQIVAGENHSCV 280
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYSEE--VVCGGYHTCVLTSGGEL 309
+ G +Y +G ++ + P+L+S L P ++ +V G +T G +
Sbjct: 281 MTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAV 340
Query: 310 YTWGSNENGCLGIG 323
Y+WG N G LG G
Sbjct: 341 YSWGRNCFGQLGHG 354
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 43 WGNGDYGRLGLG-----SLESRW-----RPVVCSAF---EKH---SLKALACGGAHTLFL 86
WG +G+LG G S +R+ P + S F E+H SL +++CG H L +
Sbjct: 343 WGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAI 402
Query: 87 TET-GCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV---- 140
TE ++A G + GQLG+ + + P + +K +V + + S +
Sbjct: 403 TEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPG 462
Query: 141 -----DGELYMWGKNSNGQLGLGKKAAKVI 165
D +++ WG+ S GQLG G V+
Sbjct: 463 SGPKGDMKVFSWGRGSFGQLGYGSGKVPVM 492
>gi|418700078|ref|ZP_13261023.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Bataviae str. L1111]
gi|410760950|gb|EKR27143.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Bataviae str. L1111]
Length = 479
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 104 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 161
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 162 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 219
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 220 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 273
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 274 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 333
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 334 ALTSDGKIYSWGLNASGQLGIG 355
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 175 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 232
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 233 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 291
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 292 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 349
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 350 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 401
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 402 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 460
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 289 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 346
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 347 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 406
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 407 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 460
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 28/256 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQIST 130
+ ++ G H L L+ G + E YS++ LR + +K+++QI+
Sbjct: 99 IHSMDLGADHMLILSSGGKPF-------------EYDNYSMKHLRFESILQEKKIIQITC 145
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G +HS A++ GEL+ WG+N +GQLG+G+K P VE LSGI Q + G S+
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTT-TPQIVEHLSGIPLAQISAGEAHSM 204
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A++ G + SWG G+LG + S+ +P LI+ L+ KV+ A G H+
Sbjct: 205 ALSMSGNIYSWGKNEFGQLGLDH---------TESKDSPSLIEALDNQKVEFLACGGSHT 255
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSG-G 307
A + ++G ++ FG ++ + RP L+++L + ++ CG +HT S G
Sbjct: 256 ALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLG 315
Query: 308 ELYTWGSNENGCLGIG 323
+++++GS + G LG G
Sbjct: 316 KVFSFGSGKEGQLGNG 331
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGL +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESK--DSPSLIEALDNQKVEFLAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHTALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELAGNRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFG 263
G H+ A + + G+V+ FG
Sbjct: 302 CGRWHTLAYVSDLGKVFSFG 321
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LGL ES+ P + A + ++ LACGG+HT LT+ G ++ G GQ
Sbjct: 215 WGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G GQLG G
Sbjct: 275 LG-HNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGT 333
Query: 161 AAKVIPIPTKV 171
++IP+P KV
Sbjct: 334 RDQLIPLPMKV 344
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G S P + L ++ G AH++ L+ +G +Y+ G N+FG
Sbjct: 162 WGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGEAHSMALSMSGNIYSWGKNEFG 221
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ P I L + V+ ++ G H++ +T DG L+ +G +GQLG
Sbjct: 222 QLGLDHTESKD-SPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNST 280
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L+G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 281 QNEL--RPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNG 331
>gi|328865764|gb|EGG14150.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
Length = 1011
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 141/295 (47%), Gaps = 40/295 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +L LG + S + V+ + ++H + + GG L LT+TG +Y+ GL +G+
Sbjct: 194 WGQMFTTQLSLGKV-STPQTVLFNHHQEHGVSNVQFGGNFALMLTDTGMIYSWGLCSYGK 252
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + P +I LK K++ QI+ G HS A+ G +Y WG + G+LGL K
Sbjct: 253 LGQYSKNDCPI-PSQIMELKNKQITQIACGKDHSLALDEIGCVYAWGNGAGGRLGLNK-- 309
Query: 162 AKVIPIPTKVECLSGIFTKQA-----ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
V+ +PT V F Q A G + S+AV G+V SWG G G+LG+ S+
Sbjct: 310 TDVVSLPTMV----AHFPDQVKVVGIACGQDHSMAVCQDGRVFSWGQAGFGKLGY---SN 362
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+GF + TPR ++ + K + G HS + G VY FG +EG
Sbjct: 363 PMGF-----QSTPRRVESIPACKQ--VSCGNWHSLTLTNGGDVYAFGSN-------REGR 408
Query: 277 HARRPSLISKLPYS---------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
R + + P +++ G VLT+ +YTWG+N+ G LG+
Sbjct: 409 CGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVLTTSNMIYTWGNNDKGQLGV 463
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 23/248 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGNG GRLGL + P + + F ++ + +ACG H++ + + G V++ G FG
Sbjct: 297 WGNGAGGRLGLNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVCQDGRVFSWGQAGFG 356
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+LG S +G+ P R+ + Q+S G HS +T G++Y +G N G+ G ++
Sbjct: 357 KLGYSNPMGFQSTPRRVESIPA-CKQVSCGNWHSLTLTNGGDVYAFGSNREGRCG--REL 413
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE------- 214
V P +V + I K+ G + +T + +WG G+LG E
Sbjct: 414 TTVESPPNRVIFDANIKIKKIGAGLNFNAVLTTSNMIYTWGNNDKGQLGVLIETKSNSTN 473
Query: 215 ------------SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
S L T Y P+L+K L + G+ H + + G V F
Sbjct: 474 NSRNNNNNNNYISVYAATLNDTYTYVPQLVKTLLPYPINNIEVGYEHVVVLTDAGEVITF 533
Query: 263 GDRAVDKM 270
G +D++
Sbjct: 534 GSNQMDQL 541
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 94/244 (38%), Gaps = 62/244 (25%)
Query: 131 GYHHSSAITVD--GELYMWGKNSNGQLGLGKKAAKVI----------------------- 165
G+H++S T + Y WG+ QL LGK +
Sbjct: 176 GHHNASPNTENPISPFYQWGQMFTTQLSLGKVSTPQTVLFNHHQEHGVSNVQFGGNFALM 235
Query: 166 --------------------------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
PIP+++ L Q A G + S+A+ G V
Sbjct: 236 LTDTGMIYSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGKDHSLALDEIGCVY 295
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGR 258
+WG G GRLG + + P ++ + VKV A G HS + ++GR
Sbjct: 296 AWGNGAGGRLGLNKTDVV---------SLPTMVAHFPDQVKVVGIACGQDHSMAVCQDGR 346
Query: 259 VYIFGDRAVDKMLFQEGN-HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
V+ +G K+ + P + +P ++V CG +H+ LT+GG++Y +GSN
Sbjct: 347 VFSWGQAGFGKLGYSNPMGFQSTPRRVESIPACKQVSCGNWHSLTLTNGGDVYAFGSNRE 406
Query: 318 GCLG 321
G G
Sbjct: 407 GRCG 410
>gi|456985549|gb|EMG21340.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Copenhageni str. LT2050]
Length = 457
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 103 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 160
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 161 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 218
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 219 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 272
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 273 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 332
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 333 ALTSDGKIYSWGLNASGQLGIG 354
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 130/291 (44%), Gaps = 33/291 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 174 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 231
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 232 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 290
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 291 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 348
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 349 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 400
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWG 313
+ + E N + + + VV CG H L GE+Y WG
Sbjct: 401 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWG 451
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 288 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 345
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 346 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 405
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWG 202
LG+ + + P K + GI G + A+ G G++ WG
Sbjct: 406 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWG 451
>gi|421083959|ref|ZP_15544825.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
santarosai str. HAI1594]
gi|421102219|ref|ZP_15562827.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|410368047|gb|EKP23427.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|410433506|gb|EKP77851.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
santarosai str. HAI1594]
Length = 478
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 103 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 160
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 161 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 218
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 219 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 272
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 273 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 332
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 333 ALTSDGKIYSWGLNASGQLGIG 354
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 174 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 231
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 232 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 290
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 291 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 348
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 349 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 400
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 401 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 459
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 288 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 345
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 346 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 405
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 406 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 459
>gi|148230808|ref|NP_001088703.1| uncharacterized protein LOC495967 [Xenopus laevis]
gi|56270445|gb|AAH87342.1| LOC495967 protein [Xenopus laevis]
Length = 394
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 12/283 (4%)
Query: 36 QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVY 93
QR FA WG YG+LGLG+ + P + + F H +K+++ GG H+ +T+ G VY
Sbjct: 9 QRLFA--WGANSYGQLGLGTTQDSLLPQLVTGFPNHETVIKSISAGGGHSAAVTDAGHVY 66
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
G N GQLG++ + L L V +++ G+ + +T GEL G N+
Sbjct: 67 VCGQNSEGQLGLNHTTDVTHFSLCPGTLTLRVSKVACGWDFTLILTDSGELLSCGANTYS 126
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG + IP P ++ + A G +A+T G++ WG+G +
Sbjct: 127 QLGRAGEERSCIPRPLDIQKRKVL---DVAAGLRHVLALTDNGQIFQWGSGLASHARRFS 183
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ + + S++E P + + G+ K+ AAG H + + G VY++G ++L
Sbjct: 184 QQKPIPAVYSSTE--PCAVPGMNGICGKMVAAGSYHCVALSDAGDVYVWGSNKHGQLLHS 241
Query: 274 EGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWG 313
+ + + L E VV G H T G+++TWG
Sbjct: 242 DPFLLHPHRVQAHLFLGERIVAVVSGWTHLVAQTDTGKVFTWG 284
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 31/199 (15%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG---LKKEVVQIST 130
K +A G H + L++ G VY G N GQL S+ + L P R+ L + +V + +
Sbjct: 209 KMVAAGSYHCVALSDAGDVYVWGSNKHGQLLHSDP--FLLHPHRVQAHLFLGERIVAVVS 266
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAA------------KVIPIPTKVECLSGIF 178
G+ H A T G+++ WG+ + QLG + +P + L+G
Sbjct: 267 GWTHLVAQTDTGKVFTWGRANYSQLGRPPNSEGTGLHETVLQGISANQLPAWIPSLTG-- 324
Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
+ Q A G E ++AV GG + SWG G G+G E+++ P L+
Sbjct: 325 SSQVACGSEHNLAVCGG-LLYSWGWNEHGMCGNGSETNV---------PVPTLVGIPPTA 374
Query: 239 KVKIAAAGFLHSA--CIDE 255
+V + G HS CI+
Sbjct: 375 RVDLIGCGAGHSMALCINP 393
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK--VKIAAAGFLHSACID 254
++ +WGA G+LG G L P+L+ + +K +AG HSA +
Sbjct: 10 RLFAWGANSYGQLGLGTTQDSL---------LPQLVTGFPNHETVIKSISAGGGHSAAVT 60
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYHTCVLTSGGEL 309
+ G VY+ G + ++ NH + S P + +V CG T +LT GEL
Sbjct: 61 DAGHVYVCGQNSEGQLGL---NHTTDVTHFSLCPGTLTLRVSKVACGWDFTLILTDSGEL 117
Query: 310 YTWGSNENGCLG 321
+ G+N LG
Sbjct: 118 LSCGANTYSQLG 129
>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
Length = 1106
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 140/308 (45%), Gaps = 49/308 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + A +++ +ACG H+ +T +G +Y G ++
Sbjct: 333 WGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNY 392
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R++G + V IS G H++ +T G+L+ +G + G LG G
Sbjct: 393 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 451
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
+ K + +P +VE L G+ T +AA G + AV + +WG G
Sbjct: 452 DR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDK 509
Query: 207 GRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
GRLGH +E+ ++ + +E+ V A G + + +GRVY G
Sbjct: 510 GRLGHVDKEAKLVPTCVALAEHN-----------VCQVACGHSLTVALTTSGRVYTMGS- 557
Query: 266 AVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSN 315
+ Q GN P KLP + EE+ CG YH VLTS E+YTWG
Sbjct: 558 ---PVYGQLGN----PQADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKG 610
Query: 316 ENGCLGIG 323
NG LG G
Sbjct: 611 ANGRLGHG 618
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 127/269 (47%), Gaps = 33/269 (12%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQ-I 128
++ +ACGG H +T+ G V++ G G+L G+ ++ L P I L ++ +
Sbjct: 310 DVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV---LHPKLIEALSNTNIELV 366
Query: 129 STGYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
+ G +HS A+T+ G+LY WG + G LG G + + +P +V L GI + G
Sbjct: 367 ACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHW--VPKRVNGPLEGIHVSYISCG 424
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ VT G++ ++G G G LGHG S+ PR ++ L+G++ AA
Sbjct: 425 PWHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTVRAAC 475
Query: 246 GFLHSACIDE--NGRVYIFGDRAVDKMLFQEGNHARR----------PSLISKLPYSE-E 292
G H+A + E G +VD + +G+ R P+ ++ ++ +
Sbjct: 476 GVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEHNVCQ 535
Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLG 321
V CG T LT+ G +YT GS G LG
Sbjct: 536 VACGHSLTVALTTSGRVYTMGSPVYGQLG 564
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 129/300 (43%), Gaps = 39/300 (13%)
Query: 43 WGNG--DYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WGNG +YG LG G+ S W P V E + ++CG HT +T G ++ G
Sbjct: 385 WGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGT 444
Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAIT------------VDGELYM 146
FG LG + SL P + LK V+ + G H++A+ +L+
Sbjct: 445 FGALGHGDRKSVSL-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFT 503
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG G+LG K AK++P L+ Q A G +VA+T G+V + G+
Sbjct: 504 WGDGDKGRLGHVDKEAKLVPT---CVALAEHNVCQVACGHSLTVALTTSGRVYTMGSPVY 560
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
G+LG+ Q L P L++ +L V+ A G H A + VY +G
Sbjct: 561 GQLGNPQADGKL----------PILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKG 610
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW--GSNENGCLG 321
A ++ + + P+L+ L + + CG T + L+ W G +++ C G
Sbjct: 611 ANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAIC----LHKWVSGVDQSMCSG 666
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 26/197 (13%)
Query: 142 GELYMWGKNS--------NGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
G++++WG+ + N ++G LG K + P +E + + A G +
Sbjct: 266 GDVFIWGEGTGDGVLGGGNHRVGSCLGAKMDSLFP--KALESAVVLDVQNIACGGRHAAL 323
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
VT G+V SWG GRLGHG +S +L P+LI+ L +++ A G HS
Sbjct: 324 VTKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIEALSNTNIELVACGEYHSC 374
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSG 306
+ +G +Y +G+ + L GN P ++ + + + CG +HT V+TS
Sbjct: 375 AVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSA 434
Query: 307 GELYTWGSNENGCLGIG 323
G+L+T+G G LG G
Sbjct: 435 GQLFTFGDGTFGALGHG 451
>gi|418687991|ref|ZP_13249148.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|418742687|ref|ZP_13299057.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
gi|410737415|gb|EKQ82156.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|410750062|gb|EKR07045.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
Length = 510
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 131/263 (49%), Gaps = 26/263 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG+ + G ++ RI + + ++ I +
Sbjct: 132 LSAGGAHSGFLI-NGELYTVGRNNFGQLGMGISTGDNIND-RIMKVDRIRDIFSIHFNQN 189
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK---------AAKVIPIPTKVECLSGIFTKQAAL 184
+S AI+ G +Y WG NS GQLG+G A P PT++ ++ A
Sbjct: 190 NSIAISQSGRVYTWGANSKGQLGIGNNNTDPAKASDAGNRQP-PTEIPGINNAV--MGAY 246
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
GF ++ + G V+++G G+LG+G+ + R++ P + +L V IA
Sbjct: 247 GFNHALILKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVIQLRNVIQVIA- 301
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
G HSA + ENG VY++G + + N + P + LP +++ G H
Sbjct: 302 -GSEHSAALTENGEVYVWGRNQYGNLGNGIVSPANTVQSVPVKVEGLPKIKQIANGRDHI 360
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
LT G++Y+WG N +G LGIG
Sbjct: 361 LALTYDGKIYSWGLNASGQLGIG 383
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 133/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 203 WGANSKGQLGIGNNNTDPAKASDAGNRQPPTEIPGINNAVMGAY--GFNHALILKSDGTV 260
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 261 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVIQLRN-VIQVIAGSEHSAALTENGEVYVWG 319
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE L I KQ A G + +A+T GK+ SWG S
Sbjct: 320 RNQYGNLGNGIVSPANTVQSVPVKVEGLPKI--KQIANGRDHILALTYDGKIYSWGLNAS 377
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 378 GQLGIGGNGNPPPTPIPTKILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 429
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 430 NMASLALGESNTPKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 488
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP-TKVECLSGIFTKQAAL 184
++S G HS + ++GELY G+N+ GQLG+G I KV+ + IF+ +
Sbjct: 130 TKLSAGGAHSGFL-INGELYTVGRNNFGQLGMGISTGDNINDRIMKVDRIRDIFS----I 184
Query: 185 GFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
F Q S+A++ G+V +WGA G+LG G ++ P E+ G+ +
Sbjct: 185 HFNQNNSIAISQSGRVYTWGANSKGQLGIGNNNTDPAKASDAGNRQPP--TEIPGINNAV 242
Query: 243 AAA-GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-----PSLISKLPYSEEVVCG 296
A GF H+ + +G V FG V ++ E N R P + +L +V+ G
Sbjct: 243 MGAYGFNHALILKSDGTVVAFGQNNVGQLGNGENNLNRNSFSSNPVNVIQLRNVIQVIAG 302
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
H+ LT GE+Y WG N+ G LG G
Sbjct: 303 SEHSAALTENGEVYVWGRNQYGNLGNG 329
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 317 VWGRNQYGNLGNGIVSPANTVQSVPVKVEGLPK--IKQIANGRDHILALTYDGKIYSWGL 374
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 375 NASGQLGIGGNGNPPPTPIPTKILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 434
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + P K + GI G + A+ G G++ WG G LG
Sbjct: 435 ALGESNTPKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 488
>gi|386724712|ref|YP_006191038.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
gi|384091837|gb|AFH63273.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
Length = 338
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 131/281 (46%), Gaps = 18/281 (6%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG+ +G+LG G+ R PV HS+ AL G +H+L + G V+A G N
Sbjct: 51 AWAWGSNLFGQLGDGTTYDRLTPVQVQGL--HSVVALEAGSSHSLAVKADGSVWAWGWNT 108
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+GQLG S P+++ GL VV ++ G HS A+ DG ++ WG N +GQLG G
Sbjct: 109 YGQLGDGTTDSRS-TPVQVEGLD-SVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGDGT 166
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+P+ +V L + + A F S A+ G V +WGA SG+LG
Sbjct: 167 YTESTVPV--QVTGLGSVVSVSAGNTF--SSALKSDGTVWAWGANDSGQLGS-------- 214
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P ++ ++G +S + +G V+ +G + ++ +
Sbjct: 215 --ETAASNSPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNGTTTSSS 272
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
P +++L V G H + SGG ++ WG+N G L
Sbjct: 273 APVQVTRLGSVVSVAAGPLHGLAVQSGGTVWDWGNNTYGQL 313
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 22/283 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +LG G+ R+ P+ + S+ ++ GGA + + G +A G N FGQ
Sbjct: 4 WGANSNAQLGDGTKTDRYSPIPVKNLD--SVIGISAGGAASFAVRSDGTAWAWGSNLFGQ 61
Query: 103 LGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + Y L P+++ GL VV + G HS A+ DG ++ WG N+ GQLG G
Sbjct: 62 LG--DGTTYDRLTPVQVQGL-HSVVALEAGSSHSLAVKADGSVWAWGWNTYGQLGDGTTD 118
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ P+ +VE L + A G S+AV G V +WGA SG+LG G +
Sbjct: 119 SRSTPV--QVEGLDSVVA--VAAGSGHSLAVKADGSVWAWGANWSGQLGDGT------YT 168
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ-EGNHARR 280
ST P + L G V + +AG S+ + +G V+ +G ++ + +++
Sbjct: 169 EST---VPVQVTGL-GSVVSV-SAGNTFSSALKSDGTVWAWGANDSGQLGSETAASNSPS 223
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ + + + G ++ L + G ++ WG N +G LG G
Sbjct: 224 PVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNG 266
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 19/231 (8%)
Query: 92 VYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
++A G N QLG ++ YS P+ + L V+ IS G S A+ DG + WG N
Sbjct: 1 MWAWGANSNAQLGDGTKTDRYS--PIPVKNLD-SVIGISAGGAASFAVRSDGTAWAWGSN 57
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG G ++ P+ +V+ L + +A G S+AV G V +WG G+LG
Sbjct: 58 LFGQLGDGTTYDRLTPV--QVQGLHSVVALEA--GSSHSLAVKADGSVWAWGWNTYGQLG 113
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + S TP ++ L+ V AAG HS + +G V+ +G ++
Sbjct: 114 DG---------TTDSRSTPVQVEGLD--SVVAVAAGSGHSLAVKADGSVWAWGANWSGQL 162
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ P ++ L V G + L S G ++ WG+N++G LG
Sbjct: 163 GDGTYTESTVPVQVTGLGSVVSVSAGNTFSSALKSDGTVWAWGANDSGQLG 213
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 17/181 (9%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++ WG NSN QLG G K + PIP K ++ + GI AA S AV G +WG
Sbjct: 1 MWAWGANSNAQLGDGTKTDRYSPIPVKNLDSVIGISAGGAA-----SFAVRSDGTAWAWG 55
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ G+LG G L TP ++ L V AG HS + +G V+ +
Sbjct: 56 SNLFGQLGDGTTYDRL---------TPVQVQGLH--SVVALEAGSSHSLAVKADGSVWAW 104
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
G ++ + P + L V G H+ + + G ++ WG+N +G LG
Sbjct: 105 GWNTYGQLGDGTTDSRSTPVQVEGLDSVVAVAAGSGHSLAVKADGSVWAWGANWSGQLGD 164
Query: 323 G 323
G
Sbjct: 165 G 165
>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 570
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 120/284 (42%), Gaps = 15/284 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ +G+LG G+ P+ S A+ G H+L LT G V A G ND GQ
Sbjct: 62 WGDNAFGQLGDGTTTGSNTPLPVSLPAGTDATAVVAGDFHSLALTSAGTVLAWGRNDSGQ 121
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S + + V ++ G+ HS A+T G + WG NS GQLG G +
Sbjct: 122 LGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLALTSTGVVLAWGSNSFGQLGDGTTVS 181
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P+ ++ G+ A G S+A+T G L+WG SG+LG G
Sbjct: 182 SSTPVAVRLPV--GVTVTAVAAGSGHSLALTSVGAALAWGNNFSGQLGDGT--------- 230
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+ S TP ++ G V A G HS + G +G L +
Sbjct: 231 TVSSSTPVAVRLPVGTTVTAVAGGSHHSLALTSAGAALAWGGN-FSGQLGDGTTVSSSTP 289
Query: 283 LISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ LP V G H+ LTS G WGSN +G LG G
Sbjct: 290 VVVSLPVGTTVTALAGGDAHSVALTSAGAALAWGSNGDGQLGDG 333
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 118/286 (41%), Gaps = 18/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+ S PVV ++ A+A G H+L LT TG V A G N FGQ
Sbjct: 114 WGRNDSGQLGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLALTSTGVVLAWGSNSFGQ 173
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + S P+ + + V ++ G HS A+T G WG N +GQLG G
Sbjct: 174 LGDGTTVSSS-TPVAVRLPVGVTVTAVAAGSGHSLALTSVGAALAWGNNFSGQLGDGTTV 232
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ ++ G A G S+A+T G L+WG SG+LG G S +
Sbjct: 233 SSSTPVAVRLPV--GTTVTAVAGGSHHSLALTSAGAALAWGGNFSGQLGDGTTVSSSTPV 290
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ G V A G HS + G +G D L N
Sbjct: 291 VVSLPV---------GTTVTALAGGDAHSVALTSAGAALAWGSNG-DGQLGDGTNADSSV 340
Query: 282 SLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ LP + G H +TS G WG N +G LG G
Sbjct: 341 PIAVSLPAGATITAIAAHDGAHNLAITSTGAALAWGGNGDGQLGDG 386
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 88/208 (42%), Gaps = 10/208 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN G+LG G+ S PV ++ A+A G H+L LT G A G N GQ
Sbjct: 218 WGNNFSGQLGDGTTVSSSTPVAVRLPVGTTVTAVAGGSHHSLALTSAGAALAWGGNFSGQ 277
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S + + V ++ G HS A+T G WG N +GQLG G A
Sbjct: 278 LGDGTTVSSSTPVVVSLPVGTTVTALAGGDAHSVALTSAGAALAWGSNGDGQLGDGTNAD 337
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+PI + + I A G ++A+T G L+WG G G+LG G +
Sbjct: 338 SSVPIAVSLPAGATITAIAAHDG-AHNLAITSTGAALAWGGNGDGQLGDGTNA------- 389
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHS 250
P + G + AA HS
Sbjct: 390 --DSSVPIAVSLPAGTTITAIAASVEHS 415
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 35 LQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
L AAL WG G+LG G+ S PVV S ++ ALA G AH++ LT G
Sbjct: 261 LTSAGAALAWGGNFSGQLGDGTTVSSSTPVVVSLPVGTTVTALAGGDAHSVALTSAGAAL 320
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH---HSSAITVDGELYMWGKN 150
A G N GQLG N S+ P+ +S L + H H+ AIT G WG N
Sbjct: 321 AWGSNGDGQLGDGTNADSSV-PIAVS-LPAGATITAIAAHDGAHNLAITSTGAALAWGGN 378
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+GQLG G A +PI V +G A E S+A+
Sbjct: 379 GDGQLGDGTNADSSVPI--AVSLPAGTTITAIAASVEHSLAL 418
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 55/140 (39%), Gaps = 13/140 (9%)
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
E S + G L+WG G+LG G +T TP + G AG
Sbjct: 48 EPSPSAVGSDAFLAWGDNAFGQLGDGT---------TTGSNTPLPVSLPAGTDATAVVAG 98
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGY-HTCVL 303
HS + G V +G R L + ++ +LP V V G+ H+ L
Sbjct: 99 DFHSLALTSAGTVLAWG-RNDSGQLGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLAL 157
Query: 304 TSGGELYTWGSNENGCLGIG 323
TS G + WGSN G LG G
Sbjct: 158 TSTGVVLAWGSNSFGQLGDG 177
>gi|307109803|gb|EFN58040.1| hypothetical protein CHLNCDRAFT_20586, partial [Chlorella
variabilis]
Length = 274
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 14/232 (6%)
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
A G N GQLG+ + + EP + + + +S G H++ +T GE+Y WG N G
Sbjct: 54 AAGCNSNGQLGVGDTADVA-EPQSLK-VARRWAALSMGSSHAAGVTGQGEVYTWGLNDKG 111
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
QLG + P ++E L G K + G E ++A+T V++WG+ G+ GHG
Sbjct: 112 QLGSATGPGENKDAPKRMELLVGWNVKAISCGAEHTIAIT-PEDVITWGSNEYGQCGHGD 170
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
++ T PR IK L V G H+ C+ +VY +G + ++
Sbjct: 171 KA-------ETDWVKPRSIKMLHEQMVTQVICGRYHTLCVTATSQVYAWGRNSSGQLGLG 223
Query: 274 EGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ R P+L+ LP +++ G H+ LTS G L+TWG NE+G LG+
Sbjct: 224 DTADRRGPTLVEGLWALPV-QQLAAGEAHSVALTSNGFLFTWGGNEHGQLGL 274
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 26/228 (11%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK------ALACGGAHTLFLTETGCVYATGL 97
G G+LG+G E SLK AL+ G +H +T G VY GL
Sbjct: 56 GCNSNGQLGVGD--------TADVAEPQSLKVARRWAALSMGSSHAAGVTGQGEVYTWGL 107
Query: 98 NDFGQLGISENIGYSLE-PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
ND GQLG + G + + P R+ L V IS G H+ AIT + ++ WG N GQ
Sbjct: 108 NDKGQLGSATGPGENKDAPKRMELLVGWNVKAISCGAEHTIAITPE-DVITWGSNEYGQC 166
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G KA P ++ L Q G ++ VT +V +WG SG+LG G +
Sbjct: 167 GHGDKAETDWVKPRSIKMLHEQMVTQVICGRYHTLCVTATSQVYAWGRNSSGQLGLGDTA 226
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G P L++ L + V+ AAG HS + NG ++ +G
Sbjct: 227 DRRG---------PTLVEGLWALPVQQLAAGEAHSVALTSNGFLFTWG 265
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 43 WGNGDYGRLGLGS-LESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +YG+ G G E+ W +P + + + CG HTL +T T VYA G N
Sbjct: 158 WGSNEYGQCGHGDKAETDWVKPRSIKMLHEQMVTQVICGRYHTLCVTATSQVYAWGRNSS 217
Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG+ + P + GL V Q++ G HS A+T +G L+ WG N +GQLGL
Sbjct: 218 GQLGLGDTADRR-GPTLVEGLWALPVQQLAAGEAHSVALTSNGFLFTWGGNEHGQLGL 274
>gi|45657342|ref|YP_001428.1| regulator of chromosome condensation [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|45600580|gb|AAS70065.1| regulator of chromosome condensation [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
Length = 498
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 24/262 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG IS G + +++ ++ ++ I +
Sbjct: 123 LSAGGAHSGFLI-NGELYTVGRNNFGQLGTGISTGDGINDRIVKVDPIR-DIFSIHFNQN 180
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK----AAKVIP----IPTKVECLSGIFTKQAALG 185
+S AI+ +G +Y WG NS GQLG+G A P PT++ ++ A G
Sbjct: 181 NSMAISQNGRVYTWGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAV--MGAYG 238
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
F ++ + G V+++G G+LG+G+ + R++ P + +L V I A
Sbjct: 239 FNHALVLKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI--A 292
Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
G HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 293 GSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHIL 352
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 353 ALTSDGKIYSWGLNASGQLGIG 374
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 194 WGANSKGQLGIGNNNTDPARASDPGNRQPPTEIPGINDAVMGAY--GFNHALVLKSDGTV 251
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 252 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRN-VIQVIAGSEHSAALTENGEVYIWG 310
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 311 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 368
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 369 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 420
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 421 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 479
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 308 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 365
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 366 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 425
Query: 156 GLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 426 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 479
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 114/253 (45%), Gaps = 15/253 (5%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A++ GG H + L+ G VY+ G D G+LG + Y L L E+V I+ G HH
Sbjct: 18 AVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHH 77
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT G LY WGK G+LG G ++ P VE L A G Q++ V
Sbjct: 78 SAAITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCV 135
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T V SWG G G+LG G S P I L G+ V G S
Sbjct: 136 TDDDNVWSWGDGDYGKLGRGG---------SDGCKVPLKIDSLAGLGVVKVECGSQFSVA 186
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ +G VY +G ++ +H RRP ++ L + + G H + GE++
Sbjct: 187 LTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVF 246
Query: 311 TWGSNENGCLGIG 323
TWG N+ G LG G
Sbjct: 247 TWGDNDEGQLGDG 259
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG G+ S RP + + +ACGG H+ +T G +Y G +G+
Sbjct: 38 WGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 97
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L+ +V+ ++ +G + +T D ++ WG G+LG G
Sbjct: 98 LGHGDS-DDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 155
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 156 -GSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 212
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR + L+G K+ A G LH + G V+ +GD ++ +
Sbjct: 213 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALH 265
Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
RP L+ L + V CG HT
Sbjct: 266 RPRLVHALQGKKITRVACGSAHT 288
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 17/215 (7%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
LE ++ +KK V +S+G H A++ +G +Y WG+ +G+LG G K + P +E
Sbjct: 6 LESIQHVFIKK--VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVS--YDRPKLIE 61
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L G+ A G S A+T G + +WG G GRLGHG S + P+++
Sbjct: 62 DLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---------SDDQLRPKVV 112
Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
+ L+ KV A +G + C+ ++ V+ +GD K+ + + P I L
Sbjct: 113 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGL 172
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG + LT G +YTWG + LG G
Sbjct: 173 GVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 207
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 15/124 (12%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ D G+LG G+ + RP + A + + +ACG AHTL ++T +
Sbjct: 248 WGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTL-------AWSTAKATQSR 300
Query: 103 LGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
+ S + Y L + L S L+ +V + HH + + L M+ G +GL K A
Sbjct: 301 MPASTPMEYDLVKDLSYSVLRNRLVLL----HHFAELLCPA-LAMF--PITGHIGLSKLA 353
Query: 162 AKVI 165
++
Sbjct: 354 PMLV 357
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 132/256 (51%), Gaps = 28/256 (10%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQIST 130
+ ++ G H L L+ G + E YS++ LR + +K+++QI+
Sbjct: 99 IHSMDLGADHMLILSSDGKPF-------------EYDNYSMKHLRFESILQEKKIIQITC 145
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G +HS A++ GEL+ WG+N +GQLG+G+K P VE L+GI Q + G S+
Sbjct: 146 GDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTA-PQIVEHLAGIPLAQISAGEAHSM 204
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A++ G + SWG G+LG + S+ +P LI+ L+ KV+ A G H+
Sbjct: 205 ALSMSGNIYSWGKNEFGQLGLDH---------TESKDSPSLIEALDNQKVEFLACGGSHT 255
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSG-G 307
A + ++G ++ FG ++ + RP L+++L + ++ CG +HT S G
Sbjct: 256 ALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLG 315
Query: 308 ELYTWGSNENGCLGIG 323
+++++GS + G LG G
Sbjct: 316 KVFSFGSGKEGQLGNG 331
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGL +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESK--DSPSLIEALDNQKVEFLAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHTALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELAGNRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFG 263
G H+ A + + G+V+ FG
Sbjct: 302 CGRWHTLAYVSDLGKVFSFG 321
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LGL ES+ P + A + ++ LACGG+HT LT+ G ++ G GQ
Sbjct: 215 WGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G GQLG G
Sbjct: 275 LG-HNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGT 333
Query: 161 AAKVIPIPTKV 171
++IP+P KV
Sbjct: 334 RDQLIPLPMKV 344
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G S P + L ++ G AH++ L+ +G +Y+ G N+FG
Sbjct: 162 WGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGEAHSMALSMSGNIYSWGKNEFG 221
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ P I L + V+ ++ G H++ +T DG L+ +G +GQLG
Sbjct: 222 QLGLDHTESKD-SPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNST 280
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L+G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 281 QNEL--RPCLVAELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNG 331
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ R PV +++ A+A G H++ LT G V+ G N GQ
Sbjct: 82 WGQNMHGQLGDGTNTDRKIPVQVKDL--NNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQ 139
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + +P++++ L K + I++ H+ A+ DG ++ WG+N GQLG G
Sbjct: 140 LGDGTTKSRN-KPVQVNNL-KNITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTD 197
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ T+ L+ I + A G S+A G + +WG G+LG G
Sbjct: 198 RNTPVQTR--SLNTIIS--IAGGGYHSLAQKADGTIWTWGLNQYGQLGDGT--------- 244
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
T+ P L+ ++ V + G HS + NG ++I+G ++ + ++ P
Sbjct: 245 ITNRTIPVLVNGIK--DVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPV 302
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L + GG H+ +L S G ++TWG+NENG LG G
Sbjct: 303 PMGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDG 343
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 31/287 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ +SR +PV + + ++ A+A G H L L G V+ G N +GQ
Sbjct: 132 WGSNWAGQLGDGTTKSRNKPVQVNNLK--NITAIASKGLHNLALKSDGTVWTWGRNIYGQ 189
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P++ L ++ I+ G +HS A DG ++ WG N GQLG G
Sbjct: 190 LGDGTTTDRN-TPVQTRSLN-TIISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTITN 247
Query: 163 KVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ IP+ ++GI K ++ G + S+ + G + WG G+LG
Sbjct: 248 RTIPV-----LVNGI--KDVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGD-------- 292
Query: 220 FLRST-SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
RST + TP + +L+ + G HS + +G V+ +G+ ++ +G
Sbjct: 293 --RSTDNRSTPVPMGDLK--NIMTIDGGGDHSLILKSDGTVWTWGNNENGQL--GDGTTM 346
Query: 279 RRPSLI--SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R + I S L + G H+ L S G ++ WGSN NG LG G
Sbjct: 347 SRATPIQASTLSNVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDG 393
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 17/191 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G++ +R PV+ + + S+ + CGG H++ L G ++ G N GQ
Sbjct: 232 WGLNQYGQLGDGTITNRTIPVLVNGIKDVSM--IRCGGDHSIVLKNNGTIWIWGFNQHGQ 289
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P+ + LK ++ I G HS + DG ++ WG N NGQLG G +
Sbjct: 290 LGDRSTDNRS-TPVPMGDLK-NIMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMS 347
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ PI + LS + A G + S+A+ G + +WG+ +G+LG G S
Sbjct: 348 RATPI--QASTLSNV--TAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSIS------- 396
Query: 223 STSEYTPRLIK 233
+ TP L+K
Sbjct: 397 --NRSTPVLVK 405
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 21/248 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
++ G H++ L G V G N GQLG N + P+++ L V I+ G HS
Sbjct: 63 VSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKI-PVQVKDL-NNVTAIAGGAWHS 120
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+T DG ++ WG N GQLG G ++ P+ +V L I T A+ G ++A+
Sbjct: 121 VALTSDGTVWTWGSNWAGQLGDGTTKSRNKPV--QVNNLKNI-TAIASKGLH-NLALKSD 176
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G +T TP + L + + IA G+ HS
Sbjct: 177 GTVWTWGRNIYGQLGDGT---------TTDRNTPVQTRSLNTI-ISIAGGGY-HSLAQKA 225
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+G ++ +G ++ +G R P L++ + + CGG H+ VL + G ++ WG
Sbjct: 226 DGTIWTWGLNQYGQL--GDGTITNRTIPVLVNGIKDVSMIRCGGDHSIVLKNNGTIWIWG 283
Query: 314 SNENGCLG 321
N++G LG
Sbjct: 284 FNQHGQLG 291
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
RI ++Q+S G HS A+ DG + WG+N +GQLG G + IP+ +V+ L+
Sbjct: 52 RIPIFASTILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPV--QVKDLNN 109
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ A G SVA+T G V +WG+ +G+LG G + S P + L+
Sbjct: 110 V--TAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGT---------TKSRNKPVQVNNLK 158
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
+ IA+ G LH+ + +G V+ +G ++ P L + G
Sbjct: 159 NI-TAIASKG-LHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIISIAGG 216
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
GYH+ + G ++TWG N+ G LG G
Sbjct: 217 GYHSLAQKADGTIWTWGLNQYGQLGDG 243
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG +G+LG S ++R PV + ++ + GG H+L L G V+ G N+ G
Sbjct: 281 IWGFNQHGQLGDRSTDNRSTPVPMGDLK--NIMTIDGGGDHSLILKSDGTVWTWGNNENG 338
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG + + P++ S L V I++G HS A+ DG ++ WG N NGQLG G +
Sbjct: 339 QLGDGTTMSRA-TPIQASTLS-NVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSIS 396
Query: 162 AKVIPIPTKVE 172
+ P+ K++
Sbjct: 397 NRSTPVLVKIK 407
>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
Length = 557
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV+ SA + +ACG H++ LT++G VYA G N+ G
Sbjct: 114 WGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWGYNNCG 173
Query: 102 QLGISENIGYSLEPLRISG-LKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S L+ V V I G S A+ +GE+Y WG N NGQLGLG
Sbjct: 174 QVG-SGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGN 232
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P ++ L G+ +Q G+ S+A+T G + +WGA G+LG G +S+ L
Sbjct: 233 NGNQLTPC--RLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 290
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+ +++ E E + V+IAA H SA ++G+VY++G
Sbjct: 291 PV--------QIMTEKERI-VEIAACHSTHTSAAKTQSGQVYMWG 326
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 129/272 (47%), Gaps = 23/272 (8%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P + +L+ G G H L TE G ++A G N + QLG +
Sbjct: 69 LGTGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLG-NGTT 127
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P+ +S L K+V +++ G HHS A+T GE+Y WG N+ GQ+G G A + P
Sbjct: 128 NQGVAPVLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQ--PT 185
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P +V CL G S+AV G+V WG G+G+LG G + L
Sbjct: 186 PRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQL-------- 237
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
TP + L+G+ V+ +G+ HS + + G +Y +G ++ GN + + S +
Sbjct: 238 -TPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPVQI 294
Query: 287 LPYSEEVV----CGGYHTCVL-TSGGELYTWG 313
+ E +V C HT T G++Y WG
Sbjct: 295 MTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 326
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 16/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
+++T VYA GLN LG ++ S+ P ++ L ++VV +S G H T D
Sbjct: 50 IYITADDEVYALGLNCSNCLGTGDSQS-SIVPKKVDILSGRKVVSLSYGSGPHILLATED 108
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GEL+ WG N QLG G V P+ L+ T + A G S+A+T G+V +W
Sbjct: 109 GELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVT-EVACGSHHSMALTDSGEVYAW 167
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVY 260
G G++G G + ++ TPR + +V ++ G S + +NG VY
Sbjct: 168 GYNNCGQVGSGS---------TANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVY 218
Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENG 318
+G ++ L GN L++ + + GY H+ LT G LY WG+N G
Sbjct: 219 GWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYG 278
Query: 319 CLGIG 323
LG G
Sbjct: 279 QLGTG 283
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P A + ++ + G AH+L LT+ G +YA G N +GQ
Sbjct: 220 WGYNGNGQLGLGNNGNQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQ 279
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P++I K+ +V+I+ + H S+A T G++YMWG+ GQ
Sbjct: 280 LG-TGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQ-CRGQ------ 331
Query: 161 AAKVIPIPTKVECLSGIF 178
+ V+P T C +F
Sbjct: 332 -SIVLPYLTHFACTDDVF 348
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ P +S ++K V T + + IT D E+Y G N + LG G + ++P KV+
Sbjct: 28 MSPQELSTIRKACV-FGTSANEAIYITADDEVYALGLNCSNCLGTGDSQSSIVP--KKVD 84
Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
LSG K +L + + T G++ +WG G +LG+G + + P
Sbjct: 85 ILSG--RKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQGVA---------P 133
Query: 230 RLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------ 282
L+ L KV A G HS + ++G VY +G ++ G+ A +P+
Sbjct: 134 VLVSANLLNKKVTEVACGSHHSMALTDSGEVYAWGYNNCGQV--GSGSTANQPTPRRVSS 191
Query: 283 -LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +++ S +VCG + + GE+Y WG N NG LG+G
Sbjct: 192 CLQNRVAVS--IVCGQTSSLAVVDNGEVYGWGYNGNGQLGLG 231
>gi|298710339|emb|CBJ31957.1| guanyl nucleotide exchange factor [Ectocarpus siliculosus]
Length = 622
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 125/274 (45%), Gaps = 37/274 (13%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK------KEVVQI 128
A++ G H L + +G +Y G+ G+LG+ + G + + + + V++
Sbjct: 104 AISAGANHVLLVHRSGQLYTWGVGASGRLGLDLSQGGNPQADAAAATVIQAFSGRPVLRA 163
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV-IPIPTKVECLSGIFTKQAALGFE 187
S GY+HSSAIT G +Y WG + G+LGLG V +PT+V S K+ + G
Sbjct: 164 SAGYNHSSAITTSGRVYTWGSAATGKLGLGMVDRDVYCSVPTRVMVDSPTKVKEISCGAA 223
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAA 245
+ VT G + WG G GRLG G+E R +Y P L++ L G ++ +
Sbjct: 224 HTACVTASGHLFIWGCGDGGRLGLGEE-------RLGPQYEPVLVESLATGGQRIGAVSC 276
Query: 246 GFLHSACID-----------------ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
G H+ + GRVY G V A +P++
Sbjct: 277 GNSHTLALTAVREAHEGEGEGRAKALRGGRVYQAGSTNVLGTFCP----AFKPTMGLDEV 332
Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++V G H+C T GELYTWGSN +GCLG+
Sbjct: 333 MVKQVSAGYGHSCCCTMDGELYTWGSNRDGCLGL 366
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 42 LWGNGDYGRLGLGS--LESRWRPVVCSAFEK--HSLKALACGGAHTLFLTET-------- 89
+WG GD GRLGLG L ++ PV+ + + A++CG +HTL LT
Sbjct: 236 IWGCGDGGRLGLGEERLGPQYEPVLVESLATGGQRIGAVSCGNSHTLALTAVREAHEGEG 295
Query: 90 -GCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVV-QISTGYHHSSAITVDGELYM 146
G A Q G + +G + + GL + +V Q+S GY HS T+DGELY
Sbjct: 296 EGRAKALRGGRVYQAGSTNVLGTFCPAFKPTMGLDEVMVKQVSAGYGHSCCCTMDGELYT 355
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
WG N +G LGL ++ K P V CL + K A+G
Sbjct: 356 WGSNRDGCLGL-PRSTKFANFPQLVTCLY-VSPKNLAMG 392
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 16/205 (7%)
Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL----GKKAAKVIPIPTKV 171
+R V IS G +H + G+LY WG ++G+LGL G T +
Sbjct: 93 MRSPRANDAAVAISAGANHVLLVHRSGQLYTWGVGASGRLGLDLSQGGNPQADAAAATVI 152
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
+ SG +A+ G+ S A+T G+V +WG+ +G+LG G R P
Sbjct: 153 QAFSGRPVLRASAGYNHSSAITTSGRVYTWGSAATGKLGLGMVD------RDVYCSVPTR 206
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPY 289
+ KVK + G H+AC+ +G ++I+G ++ E P L+ L
Sbjct: 207 VMVDSPTKVKEISCGAAHTACVTASGHLFIWGCGDGGRLGLGEERLGPQYEPVLVESLAT 266
Query: 290 SEE----VVCGGYHTCVLTSGGELY 310
+ V CG HT LT+ E +
Sbjct: 267 GGQRIGAVSCGNSHTLALTAVREAH 291
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G++ +WG G SGRLG G +I+ G V A+AG+ HS+ I
Sbjct: 119 GQLYTWGVGASGRLGLDLSQ---GGNPQADAAAATVIQAFSGRPVLRASAGYNHSSAITT 175
Query: 256 NGRVYIFGDRAVDKM---LFQEGNHARRPS--LISKLPYSEEVVCGGYHTCVLTSGGELY 310
+GRVY +G A K+ + + P+ ++ +E+ CG HT +T+ G L+
Sbjct: 176 SGRVYTWGSAATGKLGLGMVDRDVYCSVPTRVMVDSPTKVKEISCGAAHTACVTASGHLF 235
Query: 311 TWGSNENGCLGIG 323
WG + G LG+G
Sbjct: 236 IWGCGDGGRLGLG 248
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 105/244 (43%), Gaps = 33/244 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRP-------VVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
WG G GRLGL L P V AF + + G H+ +T +G VY
Sbjct: 124 WGVGASGRLGL-DLSQGGNPQADAAAATVIQAFSGRPVLRASAGYNHSSAITTSGRVYTW 182
Query: 96 GLNDFGQLGIS--ENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G G+LG+ + Y P R+ +V +IS G H++ +T G L++WG
Sbjct: 183 GSAATGKLGLGMVDRDVYCSVPTRVMVDSPTKVKEISCGAAHTACVTASGHLFIWGCGDG 242
Query: 153 GQLGLGKKAAKVIPIPTKVECLS--GIFTKQAALGFEQSVAVT-----------GGGKVL 199
G+LGLG++ P VE L+ G + G ++A+T G K L
Sbjct: 243 GRLGLGEERLGPQYEPVLVESLATGGQRIGAVSCGNSHTLALTAVREAHEGEGEGRAKAL 302
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
GR+ +++LG + P + L+ V VK +AG+ HS C +G +
Sbjct: 303 R-----GGRVYQAGSTNVLGTF--CPAFKPTM--GLDEVMVKQVSAGYGHSCCCTMDGEL 353
Query: 260 YIFG 263
Y +G
Sbjct: 354 YTWG 357
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 22/197 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK------HSLKALACGGAHTLFLTETGCVYATG 96
WG+ G+LGLG ++ R V CS + +K ++CG AHT +T +G ++ G
Sbjct: 182 WGSAATGKLGLGMVD---RDVYCSVPTRVMVDSPTKVKEISCGAAHTACVTASGHLFIWG 238
Query: 97 LNDFGQLGI-SENIGYSLEPLRISGLK---KEVVQISTGYHHSSAITV-----DGELYMW 147
D G+LG+ E +G EP+ + L + + +S G H+ A+T +GE
Sbjct: 239 CGDGGRLGLGEERLGPQYEPVLVESLATGGQRIGAVSCGNSHTLALTAVREAHEGEGEGR 298
Query: 148 GKNSNG----QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
K G Q G P L + KQ + G+ S T G++ +WG+
Sbjct: 299 AKALRGGRVYQAGSTNVLGTFCPAFKPTMGLDEVMVKQVSAGYGHSCCCTMDGELYTWGS 358
Query: 204 GGSGRLGHGQESSILGF 220
G LG + + F
Sbjct: 359 NRDGCLGLPRSTKFANF 375
>gi|326444459|ref|ZP_08219193.1| regulator of chromosome condensation, rcc1 [Streptomyces
clavuligerus ATCC 27064]
Length = 416
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 137/293 (46%), Gaps = 25/293 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
WG G+LG ++ R+ P A K ++ LA G T + L V+ G
Sbjct: 44 WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 103
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
ND GQLG P R+ GL + Q++ G H+ A+ +G+ ++ WG N +
Sbjct: 104 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 162
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG K +P+P V+ L+G T A G E S+A+ GG +++WG G+LG+
Sbjct: 163 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGND 220
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
L ST P +K L V+I AAG S +G + +G+ ++
Sbjct: 221 T------ILLST---IPVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 270
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ P ++ LP +E +V GG H+ L S +Y WGSN+ G L G
Sbjct: 271 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADG 323
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 144/334 (43%), Gaps = 27/334 (8%)
Query: 1 MLGRSLTAMTKYYLKQDIK---LGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLE 57
M+ R KQD++ G+ + + L WG D G+LG G L
Sbjct: 57 MIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWGQNDKGQLGTG-LV 115
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC----VYATGLNDFGQLGISENIGYSL 113
++ PV + + +A G H L L G V+A G N GQLG S N+ ++
Sbjct: 116 TKAIPVPGRVPGLNGITQVAAGSLHALALRNNGDPQDGVWAWGDNIHGQLGDSTNVPKTV 175
Query: 114 EPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P+ + GL + ++TG HS A+ G L WG N GQLG IP+ +V+
Sbjct: 176 -PVPVQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGNDTILLSTIPV--EVK 232
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L+ + AA G S+A G + +WG G G LG+GQ ++ L TP +
Sbjct: 233 NLTSPVVEIAA-GCNFSLARLADGTIKAWGENGHGELGNGQTANSL---------TPVSV 282
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--SKLPYS 290
L + AG HS + + RVY +G DK +G R + SKLP
Sbjct: 283 TGLPPGSAERIVAGGNHSYALYSDYRVYGWGSN--DKGQLADGTINPRTQAMQASKLPKV 340
Query: 291 EEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIG 323
+ G + LT G + + WG+N G LG G
Sbjct: 341 TSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSG 374
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 81/202 (40%), Gaps = 34/202 (16%)
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS------V 190
A+ D + WG N GQLG + P P + L +Q A G + + V
Sbjct: 34 AVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGFAV 91
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ V +WG G+LG G L + + P + L G+ AAG LH+
Sbjct: 92 ALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSLHA 141
Query: 251 ACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGGYH 299
+ NG V+ +G D + Q G+ P + +P + V G H
Sbjct: 142 LALRNNGDPQDGVWAWG----DNIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEH 196
Query: 300 TCVLTSGGELYTWGSNENGCLG 321
+ L GG L WG+N+ G LG
Sbjct: 197 SLALREGGTLMAWGNNDKGQLG 218
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 116/219 (52%), Gaps = 15/219 (6%)
Query: 110 GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
YS+E R + +K ++QI+ G +HS A++ GEL+ WG+N +GQLG+GK
Sbjct: 21 NYSIEHARFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTA- 79
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P VE LSG+ Q + G S+A++ G + SWG G+LG G + +
Sbjct: 80 PQIVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGH---------TDDKD 130
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
P LI+ LE KV+ A G H+A + ++G V+ FG ++ + RP L++KL
Sbjct: 131 FPSLIEALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKL 190
Query: 288 PYSE--EVVCGGYHTCVLTSG-GELYTWGSNENGCLGIG 323
+ +V CG HT S G+++++GS E G LG G
Sbjct: 191 AGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNG 229
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 15/231 (6%)
Query: 65 CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-K 123
C EK+ ++ + CG H+L L++ G ++A G N GQLG+ + + P + L
Sbjct: 31 CILQEKNIIQ-ITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGV 89
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+ QIS G HS A++V G +Y WG+N GQLGLG K P+ +E L + A
Sbjct: 90 PLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDK--DFPSLIEALENQKVEFLA 147
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G + +T G V ++GAG G+LGH + +E P L+ +L G +V
Sbjct: 148 CGGSHTALLTKDGLVFTFGAGKYGQLGHNS---------TQNELRPCLVTKLAGNRVTQV 198
Query: 244 AAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
A G H+ A + + G+V+ FG + L G H + L KLP +EE+
Sbjct: 199 ACGRQHTLAYVSDLGKVFSFGS-GEEGQLGNGGTHNQLIPLPMKLPSNEEL 248
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LGLG + + P + A E ++ LACGG+HT LT+ G V+ G +GQ
Sbjct: 113 WGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQ 172
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V Q++ G H+ A D G+++ +G GQLG G
Sbjct: 173 LG-HNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNGGT 231
Query: 161 AAKVIPIPTKV 171
++IP+P K+
Sbjct: 232 HNQLIPLPMKL 242
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G + +S P + L ++ G +H++ L+ +G +Y+ G NDFG
Sbjct: 60 WGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFG 119
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ P I L+ + V+ ++ G H++ +T DG ++ +G GQLG
Sbjct: 120 QLGLGHTDDKDF-PSLIEALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNST 178
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L+G Q A G + ++A V+ GKV S+G+G G+LG+G
Sbjct: 179 QNEL--RPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNG 229
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 140/283 (49%), Gaps = 16/283 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ +S+ PV ++ A+ CGG H++ L G V+A G N G+
Sbjct: 179 WGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDHSMALDSLGRVWAWGYNGDGE 238
Query: 103 L--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
L G +EN P+ + L +++ IS G +S A++ DG + WG NS+GQLG G
Sbjct: 239 LGGGTTENNSNVPVPVPVPNL-TDIIAISAGGEYSIALSSDGSVLTWGANSDGQLGNGNT 297
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+PTK+ L K + G S+AVT G V +WG G++G+G++S+
Sbjct: 298 DQNS--VPTKISSLP--LMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPV 353
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
L P ++ L + A A F + ID GRV+ +G ++ ++
Sbjct: 354 LN------PVQVQGLTDIDAVCAGATFSLALGID--GRVWAWGLNDEGQLGDGTNTNSTT 405
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ L V CG H+ + + G++ +WG N+ G LG G
Sbjct: 406 PVEVTNLAKISAVACGSDHSLAIRN-GKVKSWGLNDEGQLGDG 447
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 19/228 (8%)
Query: 104 GISENIGYSLEPLRISGLKKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
G G+S P R +G + + QIS G+ HS A+ +G+L+ WG N +GQL
Sbjct: 129 GTQPQPGFSPRP-RPTGTQPQPAPTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQL 187
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G G ++ P+ ++ L+ I G + S+A+ G+V +WG G G LG G
Sbjct: 188 GDGTNDSQTTPVAVQINALTTITA--VDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTE 245
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ I + I+A G +S + +G V +G + ++
Sbjct: 246 NNSNVPVPVPVPNLTDI-------IAISAGGE-YSIALSSDGSVLTWGANSDGQLGNGNT 297
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P+ IS LP + + G H+ +T G +Y WG N+ G +G G
Sbjct: 298 DQNSVPTKISSLPLMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNG 345
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 90/223 (40%), Gaps = 54/223 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ + P S+ +K ++ G AH+L +TE G VYA GLND GQ
Sbjct: 284 WGANSDGQLGNGNTDQNSVPTKISSLPL--MKGISAGEAHSLAVTEDGFVYAWGLNDEGQ 341
Query: 103 LGISENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+G E + L P+++ GL ++ + G S A+ +DG ++ WG N GQLG G
Sbjct: 342 IGNGEKSADNPVLNPVQVQGLT-DIDAVCAGATFSLALGIDGRVWAWGLNDEGQLGDGTN 400
Query: 161 AAKVIPI-----------------------------------------------PTKVEC 173
P+ P V
Sbjct: 401 TNSTTPVEVTNLAKISAVACGSDHSLAIRNGKVKSWGLNDEGQLGDGSTRSSSAPLDVTG 460
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
LS I A G S+A+T G + WG G G+LG G S
Sbjct: 461 LSDIV--YVAAGESHSLAITSKGNIYVWGLNGDGQLGDGTNRS 501
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+ + PV + K + A+ACG H+L + G V + GLND GQ
Sbjct: 387 WGLNDEGQLGDGTNTNSTTPVEVTNLAK--ISAVACGSDHSLAI-RNGKVKSWGLNDEGQ 443
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S PL ++GL ++V ++ G HS AIT G +Y+WG N +GQLG G +
Sbjct: 444 LGDGSTRSSSA-PLDVTGLS-DIVYVAAGESHSLAITSKGNIYVWGLNGDGQLGDGTNRS 501
Query: 163 KVIP 166
P
Sbjct: 502 SRTP 505
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 118/260 (45%), Gaps = 33/260 (12%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHH 134
++ G +H+L L G ++A GLN+ GQLG N + ++I+ L + + G H
Sbjct: 160 ISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTT-ITAVDCGGDH 218
Query: 135 SSAITVDGELYMWGKNSNGQLGLG-KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
S A+ G ++ WG N +G+LG G + +P+P V L+ I A G E S+A++
Sbjct: 219 SMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISA--GGEYSIALS 276
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G VL+WGA G+LG+G + P I L +K +AG HS +
Sbjct: 277 SDGSVLTWGANSDGQLGNG---------NTDQNSVPTKISSLP--LMKGISAGEAHSLAV 325
Query: 254 DENGRVYIFGDRAVDKMLFQEG----------NHARRPSLISKLPYSEEVVCGGYHTCVL 303
E+G VY +G L EG N P + L + V G + L
Sbjct: 326 TEDGFVYAWG-------LNDEGQIGNGEKSADNPVLNPVQVQGLTDIDAVCAGATFSLAL 378
Query: 304 TSGGELYTWGSNENGCLGIG 323
G ++ WG N+ G LG G
Sbjct: 379 GIDGRVWAWGLNDEGQLGDG 398
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 119/219 (54%), Gaps = 15/219 (6%)
Query: 110 GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
YS+E R + +K ++QI+ G +HS A++ GEL+ WG+N +GQLG+G + A I I
Sbjct: 241 NYSIEHARFQCILQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFAS-IAI 299
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
P VE LSGI Q + G S+A++ G + SWG G+LG G + +
Sbjct: 300 PQIVENLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGH---------TDGKD 350
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
P LI+ L+ KV+ A G H+A + ++G V+ FG ++ + RP L+++L
Sbjct: 351 FPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTEL 410
Query: 288 PYSE--EVVCGGYHTCVLTSG-GELYTWGSNENGCLGIG 323
+ ++ CG HT S G+++++GS + G LG G
Sbjct: 411 AGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNG 449
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 110/221 (49%), Gaps = 14/221 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
+ CG H+L L++ G ++A G N GQLGI P + L +VQIS G H
Sbjct: 261 ITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGKAH 320
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+++ G +Y WG+N GQLGLG K P+ +E L + A G + +T
Sbjct: 321 SMALSMSGNIYSWGRNDFGQLGLGHTDGK--DFPSLIEALDNQKVEFLACGGSHTALLTK 378
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACI 253
G V ++GAG G+LGH + +E PRL+ EL G +V A G H+ A +
Sbjct: 379 DGLVFTFGAGKHGQLGHNS---------TQNELRPRLVTELAGNRVTQIACGRQHTLAYV 429
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
+ G+V+ FG + L G H + L KLP +EE+
Sbjct: 430 SDLGKVFSFGS-GKEGQLGNGGTHNQLIPLPMKLPSNEELT 469
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LGLG + + P + A + ++ LACGG+HT LT+ G V+ G GQ
Sbjct: 333 WGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQ 392
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G GQLG G
Sbjct: 393 LG-HNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGT 451
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
++IP+P K+ + + A E + G +L W
Sbjct: 452 HNQLIPLPMKLPSNEELTFESRASEKELIMIAGGNQSILLW 492
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 6/173 (3%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+GS S P + L ++ G AH++ L+ +G +Y+ G NDFG
Sbjct: 280 WGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFG 339
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ G P I L + V+ ++ G H++ +T DG ++ +G +GQLG
Sbjct: 340 QLGLGHTDGKDF-PSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNST 398
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L+G Q A G + ++A V+ GKV S+G+G G+LG+G
Sbjct: 399 QNEL--RPRLVTELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNG 449
>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
Length = 1062
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 141/301 (46%), Gaps = 36/301 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G RP + +++ +ACG HT ++ +G ++ G ++
Sbjct: 288 WGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNA 347
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R+SG + +V+ ++ G HS+ T +G+L+ +G + G LG G
Sbjct: 348 GLLGHGTEVSHWI-PKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHG 406
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
+ + +P P +V+ LSG+ T + A G + A+ K+ +WG G R
Sbjct: 407 DRES--VPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHR 464
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + + L P + L A G + + +G V+ G A
Sbjct: 465 LGHGSKETYL---------LPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYG 515
Query: 269 KMLFQEGN---HARRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ GN R P L+ KL + EE+ CG YH VLTS E++TWG NG LG
Sbjct: 516 QL----GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGH 571
Query: 323 G 323
G
Sbjct: 572 G 572
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG GS E+ P SA ++ LACG T+ LT +G V+ G +GQ
Sbjct: 457 WGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQ 516
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + G L L L E V +IS G +H + +T E++ WG+ +NG+LG G
Sbjct: 517 LGNPLSDG-RLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTE 575
Query: 162 AKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
+ PT VE L K + G F S+ +
Sbjct: 576 DRR--SPTFVEALKDRNVKSISCGSNFTASICI 606
>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 142/305 (46%), Gaps = 44/305 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + P + + ++ +ACG HT ++ +G ++ G N+
Sbjct: 289 WGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNS 348
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P R+SG + +V+ I+ G HS+ T +G+L+ +G + G LG G
Sbjct: 349 GLLGHGTDVSHWI-PKRVSGPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHG 407
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
+ K + P +++ L+G+ T + A G + A+ K+ +WG G R
Sbjct: 408 DR--KSVSSPKELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHR 465
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + + L P + L + A G + + +G V+ G A
Sbjct: 466 LGHGNKDAYL---------LPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYG 516
Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
++ GN PS K+P + EE+ CG YHT VLTS E++TWG NG
Sbjct: 517 QL----GN----PSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGANG 568
Query: 319 CLGIG 323
LG G
Sbjct: 569 QLGHG 573
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 133/300 (44%), Gaps = 33/300 (11%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLN 98
+W +G + + S+ ++ + E + + ++CG H +T G V+ G
Sbjct: 233 IWSDGVFPDGSVSSVPTKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEE 292
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN--GQLG 156
G+LG ++ L S + ++ G +H+ AI+ G+L+ WG SN G LG
Sbjct: 293 SGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLG 352
Query: 157 LGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G + IP +V L G+ A G S T GK+ ++G G G LGHG
Sbjct: 353 HGTDVSHW--IPKRVSGPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRK 410
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE----------NGRVYIFGDR 265
S+ +P+ ++ L G+K A G H+A I E + +++ +GD
Sbjct: 411 SV---------SSPKELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDG 461
Query: 266 AVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
DK GN P+ +S L Y+ +++ CG T LT+ G ++T G + G LG
Sbjct: 462 --DKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLG 519
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 27/233 (11%)
Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
++N + +PL S + +V QIS G H + +T GE++ WG+ S G+LG G +
Sbjct: 249 TKNDVLTPKPLE-SNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDH--F 305
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRS 223
P VE L+ A G + A++ G + +WG G SG LGHG +
Sbjct: 306 THPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTD--------- 356
Query: 224 TSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S + P+ + LEG++V A G HSA NG+++ FGD + + P
Sbjct: 357 VSHWIPKRVSGPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPK 416
Query: 283 LISKLP--YSEEVVCGGYHTCVLT----------SGGELYTWGSNENGCLGIG 323
+ L + +V CG +HT + S +L+TWG + LG G
Sbjct: 417 ELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHG 469
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
S + R WG+GD RLG G+ ++ P S+ ++ + LACG T+ LT +G V
Sbjct: 448 SNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHV 507
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+ G + +GQLG + G ++ + + V +IS G +H++ +T E++ WG+ +N
Sbjct: 508 FTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGAN 567
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
GQLG G + +PT VE L K + G F S+ +
Sbjct: 568 GQLGHGDTEDRK--LPTLVEALKERHVKNLSCGANFTSSICI 607
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 43 WGNG--DYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G + G LG G+ S W P V E + ++ACG H+ T G ++ G
Sbjct: 341 WGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWHSALATSNGKLFTFGDGT 400
Query: 100 FGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT----------VDGELYMW 147
FG LG +++ E ++GLK ++++ G H++AI +L+ W
Sbjct: 401 FGALGHGDRKSVSSPKELQSLNGLK--TIKVACGVWHTAAIVEVMSQSGSNISSRKLFTW 458
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G +LG G K A ++P T V L +Q A G +VA+T G V + G G
Sbjct: 459 GDGDKHRLGHGNKDAYLLP--TCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYG 516
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG+ S++ P L+++ L G V+ + G H+A + V+ +G A
Sbjct: 517 QLGNP----------SSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGA 566
Query: 267 VDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTW--GSNENGCLG 321
++ + + P+L+ L + + + CG T + ++ W G++++ C G
Sbjct: 567 NGQLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSIC----IHKWVSGADQSVCSG 621
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 146/334 (43%), Gaps = 67/334 (20%)
Query: 43 WGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G LG G +E W P+ + +K +A G H+L LTE G V + GLND G
Sbjct: 572 WGANSDGVLGHTGGIEQLW-PLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQG 630
Query: 102 QLGI-------SENIGYSLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
Q G S ++ P I KK VV I+ G +HS+ +T DGELY +G+
Sbjct: 631 QCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRG 690
Query: 151 SNGQLG------LGK------------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
QLG LG+ + + P PT++ L+G KQ A G S V
Sbjct: 691 GEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACV 750
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI---AAAGFLH 249
T G + +WG G +G+LGHG T + TP+ ++ G+K KI A G H
Sbjct: 751 TEEGALYTWGRGANGQLGHGD---------MTDQATPKRVE--AGIKDKIMVKVACGENH 799
Query: 250 SACIDENGRVYIFGDRAVDKM---------LFQEG-------NHARRPSLISKLPYSE-- 291
SA +D G +Y G ++ EG R P+ +S L
Sbjct: 800 SAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHVQ 859
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ CG +T+ G LYTWG + LG+G
Sbjct: 860 FVDIACGHGFCAAITNRGLLYTWG--KGTALGLG 891
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 125/296 (42%), Gaps = 33/296 (11%)
Query: 58 SRWRPVVC-SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG------ 110
+R RP+V K ++ ++A GG H+ +T G +Y G QLG +
Sbjct: 649 ARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGN 708
Query: 111 -------------YSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ +P R+S L +VV Q++ G HS+ +T +G LY WG+ +NGQLG
Sbjct: 709 ALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLG 768
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE-- 214
G + P + I K A G S AV G + + G SG+LG G E
Sbjct: 769 HGDMTDQATPKRVEAGIKDKIMVK-VACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWI 827
Query: 215 -----SSILGFLRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAV 267
G S E P + L V+ A G A I G +Y +G +
Sbjct: 828 CATHGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWG-KGT 886
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L G+ P+ +S + V CG H LT G+LY WGS+E G LG G
Sbjct: 887 ALGLGPSGD-VSEPTHLSSIDGVVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDG 941
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 43/263 (16%)
Query: 4 RSLTAMTKYYLKQDIKLGS------KLGICKRWISSTLQRRFAA-LWGNGDYGRLGLGSL 56
RS +A T Y+ + +L + K C R+ S+ + A WG G G+LG G +
Sbjct: 713 RSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDM 772
Query: 57 ESRWRPVVCSA-FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG----------- 104
+ P A + + +ACG H+ + G +Y TG ++ GQLG
Sbjct: 773 TDQATPKRVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHG 832
Query: 105 ---------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
E I L L + + + V I+ G+ +AIT G LY WGK + L
Sbjct: 833 EGCTGSGWSCQERIPTFLSILSVRHV--QFVDIACGHGFCAAITNRGLLYTWGKGT--AL 888
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
GLG + PT + + G+ + A G + A+T G++ WG+ +GRLG G+
Sbjct: 889 GLGPSGD--VSEPTHLSSIDGVVS--VACGDIHAAALTDKGQLYMWGSSEAGRLGDGR-- 942
Query: 216 SILGFLRSTSEYTPRLIKELEGV 238
S G R TP+L+ +
Sbjct: 943 STEGVTR-----TPKLVPAFADI 960
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 106/246 (43%), Gaps = 33/246 (13%)
Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
IS+ SL L + LK + + Y+ + G + WG NS+G LG ++
Sbjct: 531 ISKQNMTSLHLLSEASLKNKSEEFIAEYYKNIKEQT-GLILSWGANSDGVLGHTGGIEQL 589
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSILG 219
P+ +E LS + K A G S+ +T G+V S+G G+ G + S +
Sbjct: 590 WPLA--IESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAA 647
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------DRAVD-- 268
R P ++ + V IAA G+ HSA + +G +Y FG D +
Sbjct: 648 VARPRPIVLPDDLR--KKTVVSIAAGGY-HSALVTADGELYTFGRGGEFQLGHDTVMALG 704
Query: 269 ---KMLFQEGNHAR------RPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
L N A+ +P+ +S L ++V CG +H+ +T G LYTWG N
Sbjct: 705 EGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGAN 764
Query: 318 GCLGIG 323
G LG G
Sbjct: 765 GQLGHG 770
>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
variabilis]
Length = 272
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 131/281 (46%), Gaps = 21/281 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G GD G+LG GS E + P + + + LA G HT +T G +Y G N+
Sbjct: 4 VFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNEES 63
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + +L P R++ L++ +V +++ G H+ A+ G + +G GQ+GLG
Sbjct: 64 QLGVRQR-SDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPC 122
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A+V +P V+ L + + A G ++A++ G V S G G G LG G
Sbjct: 123 GARV-ELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGT------- 174
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ------- 273
+ PR I L + V A G HSA I +GRV +G R ++L
Sbjct: 175 --TEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWG-RGKHRLLPAFHCGHGD 231
Query: 274 -EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
E +P K +V CG HT +LT G +Y WG
Sbjct: 232 FENCSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 122/233 (52%), Gaps = 22/233 (9%)
Query: 92 VYATGLNDFGQLGI--SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
V+ G D GQLG +E++ P + GLK ++VV ++ G H++A+T DGELY+ G
Sbjct: 2 VWVFGRGDMGQLGDGSTEDV---FVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMG 58
Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
N QLG+ +++ + P T+V L ++ A G ++AV GG V ++G+ G+
Sbjct: 59 SNEESQLGVRQRSDALAP--TRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQ 116
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
+G LG + E PR++K+L + + AAG H+ + G V+ G+ +
Sbjct: 117 VG-------LGPCGARVEL-PRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFG 168
Query: 269 KML--FQEGNHARRPSLISKL-PYSE-EVVCGGYHTCVLTSGGELYTWGSNEN 317
+ EGN RP IS+L P ++ CG H+ +T+ G + TWG ++
Sbjct: 169 ALGRGTTEGNDVPRP--ISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKH 219
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 41 ALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A +G+ +YG++GLG +R P V + +A GG+HTL L+ TG V++ G
Sbjct: 107 AAFGSAEYGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGS 166
Query: 100 FGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
FG LG G + P IS L VVQI+ G +HS+AIT DG + WG+ + L
Sbjct: 167 FGALGRGTTEGNDV-PRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAF 225
Query: 157 -LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
G + P V+ L GI +Q + G + +V +T G V +WG
Sbjct: 226 HCGHGDFENCSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+V +G G G+LG G + + PRL+K L+ V AAG LH+A + +
Sbjct: 1 EVWVFGRGDMGQLGDGSTEDV---------FVPRLVKGLKSRDVVNLAAGALHTAAVTSD 51
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGS 314
G +Y+ G ++ ++ + A P+ ++ L + V CG HT + GG + +GS
Sbjct: 52 GELYVMGSNEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGS 111
Query: 315 NENGCLGIG 323
E G +G+G
Sbjct: 112 AEYGQVGLG 120
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
E++++G+ GQLG G + + + +P V+ L A G + AVT G++ G
Sbjct: 1 EVWVFGRGDMGQLGDG--STEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMG 58
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ E S LG + + P + LE +V+ A G H+ + + G V F
Sbjct: 59 S---------NEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAF 109
Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
G ++ L G P ++ L + V GG HT L+S G +++ G+ G
Sbjct: 110 GSAEYGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGA 169
Query: 320 LGIG 323
LG G
Sbjct: 170 LGRG 173
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 130/283 (45%), Gaps = 18/283 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
GN DYG+LG ++R R + + K +ACG HTL + E G +++ G N GQL
Sbjct: 59 GNNDYGQLG--HEKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQL 116
Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G++ P + L V VQI+ G HS A+T DGELY WG N GQLG+G
Sbjct: 117 GLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTV 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
I P ++ L+ + A G +V ++ G V +WG G+LG L
Sbjct: 177 TEIK-PKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLG----------LN 225
Query: 223 STSE-YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
T + P ++ L KV AA G S + +G V+ G ++ G + P
Sbjct: 226 DTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILP 285
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
+ +L S ++ CG HT L S G +Y WG G LG
Sbjct: 286 RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 134/286 (46%), Gaps = 17/286 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G LGLG +E + P + + ++ +ACG +T+ +T G VY+ G ND+
Sbjct: 4 WGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDY 63
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG E L+ I GL V +I+ G H+ A+ G+L+ WG N GQLGL
Sbjct: 64 GQLG-HEKARKRLQ--LIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNS 120
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P V+ L Q A G E S+A+T G++ SWG+ G+LG G
Sbjct: 121 VDCTE-RTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGS------ 173
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +E P+ I L V + A G H+ I ++G V+ +G ++ +
Sbjct: 174 --HTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRI 231
Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L ++ CG + LT G ++T G+ G LG G
Sbjct: 232 VPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHG 277
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
++ WG +G+LGLG + I +P +V+ +Q A G +V +T G+V S G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G+LGH + L +LI L+ K A G H+ ++E G+++ +G
Sbjct: 61 NDYGQLGHEKARKRL-----------QLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWG 109
Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
++ L R P ++ L S ++ CG H+ LT+ GELY+WGSN G L
Sbjct: 110 CNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQL 169
Query: 321 GIG 323
GIG
Sbjct: 170 GIG 172
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ G+LG+GS + +P + +ACGG HT+ ++++G V+A G N FG
Sbjct: 161 WGSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFG 220
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+++ + P ++ L+ +V + G S +T+DG ++ G GQLG G
Sbjct: 221 QLGLNDT-QQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNG 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGH 211
+++P +V L G Q + G ++A V G+V +WG GG+G+LG+
Sbjct: 280 MNEILP--RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGN 329
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL + R P + ACG ++FLT G V+ G +GQ
Sbjct: 214 WGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + V QIS G H+ A+ G +Y WG GQLG
Sbjct: 274 LGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASR 333
Query: 162 AKVIPI 167
+ P+
Sbjct: 334 SATTPL 339
>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
Length = 1711
Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats.
Identities = 93/328 (28%), Positives = 145/328 (44%), Gaps = 64/328 (19%)
Query: 43 WGNGDYGRLGLGSL--ESRWRP---VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
WG GRLG G L +S + P V + ++ + A+ACG HTL L + G VYA G
Sbjct: 888 WGKPHQGRLGHGQLLGDSGYVPPMRVETLSIQRVQVMAVACGQEHTLALCDNG-VYAWGS 946
Query: 98 NDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
+ +GQLG+ + P ++ LK V ++TG +HS+A+ +G ++MWG +GQLG
Sbjct: 947 STYGQLGLGD-WDRQTHPTLVTQLKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLG 1005
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G A+ + P V + Q + G+ + +T G+V ++G G G+LGHG
Sbjct: 1006 QGN--AENLNKPHLVAAVQNAV--QVSTGYAHTAVLTRSGEVFTFGCGLHGQLGHGATDK 1061
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR-AVDKMLFQEG 275
+ P+ ++ + G KV A G H+ + + +VY FG V K Q
Sbjct: 1062 V---------SIPQRVQGIMG-KVAQVACGLFHTVVVTSSQQVYTFGRHPQVWKQYLQNS 1111
Query: 276 -NHARRPSLISKLPYS-----------------------EEVVCGGYHTCVLTS------ 305
AR + ++ P +VV G H +LTS
Sbjct: 1112 RRQARASTSYTQSPAKHAMGLSGELFKPLWVQCRVEGRIRQVVAGAVHNMLLTSSVVAIA 1171
Query: 306 -----------GGELYTWGSNENGCLGI 322
G+++ WG N +G LGI
Sbjct: 1172 AGEDFSVAVDRSGKVWVWGRNSHGQLGI 1199
Score = 84.7 bits (208), Expect = 6e-14, Method: Composition-based stats.
Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 16/200 (8%)
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--KAAKVIPIPTKVECLS--GIFTKQAA 183
+S G H + +T +G +Y WGK G+LG G+ + +P P +VE LS + A
Sbjct: 870 VSCGQQHVALLTEEG-VYTWGKPHQGRLGHGQLLGDSGYVP-PMRVETLSIQRVQVMAVA 927
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E ++A+ G V +WG+ G+LG G + R T P L+ +L+ V
Sbjct: 928 CGQEHTLALCDNG-VYAWGSSTYGQLGLGD------WDRQTH---PTLVTQLKDVFCVAV 977
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
A G HSA +D GRV+++G ++ + +P L++ + + +V G HT VL
Sbjct: 978 ATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPHLVAAVQNAVQVSTGYAHTAVL 1037
Query: 304 TSGGELYTWGSNENGCLGIG 323
T GE++T+G +G LG G
Sbjct: 1038 TRSGEVFTFGCGLHGQLGHG 1057
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 41/207 (19%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G +G+LG G+ E+ +P + +A + + ++ G AHT LT +G V+ G G
Sbjct: 995 MWGWGVHGQLGQGNAENLNKPHLVAAVQ--NAVQVSTGYAHTAVLTRSGEVFTFGCGLHG 1052
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK----------NS 151
QLG S+ P R+ G+ +V Q++ G H+ +T ++Y +G+ NS
Sbjct: 1053 QLGHGATDKVSI-PQRVQGIMGKVAQVACGLFHTVVVTSSQQVYTFGRHPQVWKQYLQNS 1111
Query: 152 NGQ---------------LGLGKKAAKVIPIPTKVE-----CLSG-----IFTKQA---A 183
Q +GL + K + + +VE ++G + T A
Sbjct: 1112 RRQARASTSYTQSPAKHAMGLSGELFKPLWVQCRVEGRIRQVVAGAVHNMLLTSSVVAIA 1171
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLG 210
G + SVAV GKV WG G+LG
Sbjct: 1172 AGEDFSVAVDRSGKVWVWGRNSHGQLG 1198
Score = 40.0 bits (92), Expect = 1.6, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 41/158 (25%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN---- 98
+G G +G+LG G+ + P + +ACG HT+ +T + VY G +
Sbjct: 1046 FGCGLHGQLGHGATDKVSIPQRVQGI-MGKVAQVACGLFHTVVVTSSQQVYTFGRHPQVW 1104
Query: 99 ---------------DFGQLGISENIGYSLE---PL----RISG--------------LK 122
+ Q +G S E PL R+ G L
Sbjct: 1105 KQYLQNSRRQARASTSYTQSPAKHAMGLSGELFKPLWVQCRVEGRIRQVVAGAVHNMLLT 1164
Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
VV I+ G S A+ G++++WG+NS+GQLG+ K
Sbjct: 1165 SSVVAIAAGEDFSVAVDRSGKVWVWGRNSHGQLGIDMK 1202
>gi|330837672|ref|YP_004412313.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
17374]
gi|329749575|gb|AEC02931.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
DSM 17374]
Length = 812
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 142/301 (47%), Gaps = 24/301 (7%)
Query: 35 LQRRFAALWGNG--DYGRLGLGSLESRWRPVVCSAFEKHS-----LKALACGGAHTLFLT 87
+ ++ LW G ++G+LG+G SR PV A + A++ GG HT+ L
Sbjct: 509 IVKKDGTLWATGYNNHGQLGVGDDISRSTPVRVKASTDPDDFMTDVAAVSVGGGHTMILK 568
Query: 88 ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE----VVQISTGYHHSSAITVDGE 143
+ G ++ATG N GQLG+ + S P+ + + + VV +S G+ H+ + DG
Sbjct: 569 KDGTLWATGYNYDGQLGVGDYNDRS-TPVPVPSMNTDPNNPVVAVSVGFSHTMILKKDGT 627
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSW 201
L+ G N QLG+ K P+P +S + + AA+ G ++ + G + +
Sbjct: 628 LWATGSNGEAQLGVDDNLNKNTPVP-----VSSMGNQVAAVSAGETHTMILKKDGTLWAT 682
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
G G G LG G SS LG ST P + + V +AG LH+ + ++G ++
Sbjct: 683 GYNGYGELGLG--SSSLGTNISTPVPVPSMNTDPNN-PVAAVSAGKLHTMIVKKDGTLWA 739
Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
G D +G++ R + + E V GGYHT +L G L+ G+N G LG
Sbjct: 740 TGLN--DSGQLGDGDNTDRSTPVQVSSNVEAVFAGGYHTMILKKDGTLWATGNNWAGQLG 797
Query: 322 I 322
+
Sbjct: 798 V 798
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 17/261 (6%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI------SGLKKEVV 126
+K+++ GG HT+ L G ++ATG N GQLG+ +N S P+++ +V
Sbjct: 440 VKSVSAGGYHTMILKTDGTLWATGYNYDGQLGVGDNTDRS-TPVQVKASTAADDFMTDVA 498
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA--- 183
+ G H+ + DG L+ G N++GQLG+G ++ P+ K F A
Sbjct: 499 DVFAGESHTMIVKKDGTLWATGYNNHGQLGVGDDISRSTPVRVKASTDPDDFMTDVAAVS 558
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
+G ++ + G + + G G+LG G + RST P + + V +
Sbjct: 559 VGGGHTMILKKDGTLWATGYNYDGQLGVGDYND-----RSTPVPVPSMNTDPNNPVVAV- 612
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG-YHTCV 302
+ GF H+ + ++G ++ G ++ + + P +S + V G HT +
Sbjct: 613 SVGFSHTMILKKDGTLWATGSNGEAQLGVDDNLNKNTPVPVSSMGNQVAAVSAGETHTMI 672
Query: 303 LTSGGELYTWGSNENGCLGIG 323
L G L+ G N G LG+G
Sbjct: 673 LKKDGTLWATGYNGYGELGLG 693
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 25/258 (9%)
Query: 37 RRFAALWGNG-DY-GRLGLGSLESRWRPVVCSAFE---KHSLKALACGGAHTLFLTETGC 91
++ LW G +Y G+LG+G R PV + + + A++ G +HT+ L + G
Sbjct: 568 KKDGTLWATGYNYDGQLGVGDYNDRSTPVPVPSMNTDPNNPVVAVSVGFSHTMILKKDGT 627
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
++ATG N QLG+ +N+ + P+ +S + +V +S G H+ + DG L+ G N
Sbjct: 628 LWATGSNGEAQLGVDDNLNKN-TPVPVSSMGNQVAAVSAGETHTMILKKDGTLWATGYNG 686
Query: 152 NGQLGLGKKA-----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
G+LGLG + + +P+P+ + +A G ++ V G + + G S
Sbjct: 687 YGELGLGSSSLGTNISTPVPVPSMNTDPNNPVAAVSA-GKLHTMIVKKDGTLWATGLNDS 745
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LG G +T TP + V+ AG H+ + ++G ++ G+
Sbjct: 746 GQLGDGD---------NTDRSTPVQVSS----NVEAVFAGGYHTMILKKDGTLWATGNNW 792
Query: 267 VDKMLFQEGNHARRPSLI 284
++ + + P +
Sbjct: 793 AGQLGVSDNTNRSTPEQV 810
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 14/211 (6%)
Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
L K V +S G +H+ + DG L+ G N +GQLG+G + P+ K + F
Sbjct: 436 LVKVVKSVSAGGYHTMILKTDGTLWATGYNYDGQLGVGDNTDRSTPVQVKASTAADDFMT 495
Query: 181 QAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP-RLIKELE 236
A F ++ V G + + G G+LG G + S +R + P + ++
Sbjct: 496 DVADVFAGESHTMIVKKDGTLWATGYNNHGQLGVGDDISRSTPVRVKASTDPDDFMTDVA 555
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---- 292
V V G H+ + ++G ++ G ++ + N P + +
Sbjct: 556 AVSV-----GGGHTMILKKDGTLWATGYNYDGQLGVGDYNDRSTPVPVPSMNTDPNNPVV 610
Query: 293 -VVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
V G HT +L G L+ GSN LG+
Sbjct: 611 AVSVGFSHTMILKKDGTLWATGSNGEAQLGV 641
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 35 LQRRFAALWGNG--DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
+ ++ LW G D G+LG G R PV S+ +++A+ GG HT+ L + G +
Sbjct: 730 IVKKDGTLWATGLNDSGQLGDGDNTDRSTPVQVSS----NVEAVFAGGYHTMILKKDGTL 785
Query: 93 YATGLNDFGQLGISENIGYS 112
+ATG N GQLG+S+N S
Sbjct: 786 WATGNNWAGQLGVSDNTNRS 805
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 140/330 (42%), Gaps = 61/330 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LGLGS E+ S+ ++A G HT++LT T VY+ G N+FGQ
Sbjct: 4 WGKNDYGQLGLGS-ENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQ 62
Query: 103 -------------------------------LGISEN-----IGYSL------------E 114
+ I+E+ G SL E
Sbjct: 63 LGQQKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDSLHE 122
Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P + + VVQ++ G H A+T +G + WG N+ GQLGLG + + PT +
Sbjct: 123 PKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLE-PTIIAS 181
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L+ Q G S ++ G + +WG G+LGHG S + +PRL+K
Sbjct: 182 LNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSF--------QSSPRLVK 233
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
L +V A G HS C NG V+ +G ++ + +P I +L +
Sbjct: 234 TLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELMGTTVC 293
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ CG HT LT +L +G N N LG
Sbjct: 294 QICCGRRHTISLTDKRKLLGFGLNSNNQLG 323
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 22/237 (9%)
Query: 92 VYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y G ND+GQLG+ SEN+ S P I + V+ I++G H+ +T ++Y G N
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISC-PSPIDA-NQSVISIASGLRHTVYLTSTRKVYSCGSN 58
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG K + P+ V A G S+A+ G + WG +G L
Sbjct: 59 EFGQLGQQKSQCR----PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELM 114
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
Q+S + P+L+ ++ V A G H + E G + +G ++
Sbjct: 115 CKQDSL----------HEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQL 164
Query: 271 -LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L P++I+ L P S+ + G YH+ VL+ G L+TWG N G LG G
Sbjct: 165 GLGSSEIEFLEPTIIASLNAFPISQ-ICAGAYHSGVLSPSGTLFTWGKNNWGQLGHG 220
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG ++G+LG G+ +S + P + + +A G H++ T G V++ G G
Sbjct: 209 WGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNG 268
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ +P +I L V QI G H+ ++T +L +G NSN QLG
Sbjct: 269 QLG-HNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHND 327
Query: 161 AAKVIPIPTKV 171
+ +PI +
Sbjct: 328 TSARLPITIPI 338
>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
davidii]
Length = 1369
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 141/293 (48%), Gaps = 31/293 (10%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G D+G+LGLGS + +P A + +K +ACG HTL TE G VYA G N+ G
Sbjct: 52 MFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHTLVSTEGGKVYAVGGNNEG 111
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + + Q+S G + S+A+T DG+L+MWG+NS GQ+GL
Sbjct: 112 QLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALTEDGKLFMWGENSEGQIGLNNV 171
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
P V G + G+ S VT G++ ++G G+LG ++ +
Sbjct: 172 CNVYFPHEVTV----GKPIAWISCGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLM--- 224
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY-----IFGDRAVDKMLFQEG 275
+ P+L+ + +++A G H+ + E VY FG + +F+
Sbjct: 225 ----NHKVPQLVPGIPEKVIQVACGGG-HTVVLTEKA-VYNFGLGQFGQLGLGTFVFE-- 276
Query: 276 NHARRPSLIS-----KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P ++ K+ Y + CG HT ++T G +YT+G G LG+G
Sbjct: 277 --TTEPKIMESVKDHKITY---ISCGENHTALITDIGRMYTFGDGRYGKLGLG 324
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 119/258 (46%), Gaps = 30/258 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
LACG HT +T +Y G ND+GQLG+ +P + LK E V+ ++ G +H
Sbjct: 34 LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAV-CKPTCVKALKPEKVKHVACGRNH 92
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + L FT KQ + G S
Sbjct: 93 TLVSTEGGKVYAVGGNNEGQLGLGDTEDR------NTFHLIEFFTSQHQFKQLSAGSNTS 146
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T GK+ WG G++G ++ Y P + G + + G+ H
Sbjct: 147 AALTEDGKLFMWGENSEGQIGLNNVCNV---------YFPHEV--TVGKPIAWISCGYYH 195
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
SA + G +Y FG+ K+ + NH + P L+ +P +V CGG HT VLT
Sbjct: 196 SAFVTMEGELYTFGEPEFGKLGLPKQLLMNH-KVPQLVPGIPEKVIQVACGGGHTVVLTE 254
Query: 306 GGELYTWGSNENGCLGIG 323
+Y +G + G LG+G
Sbjct: 255 KA-VYNFGLGQFGQLGLG 271
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 114/261 (43%), Gaps = 62/261 (23%)
Query: 41 ALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLND 99
A+ GN + G+LGLG E R + F +H K L+ G + LTE G ++ G N
Sbjct: 104 AVGGNNE-GQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAALTEDGKLFMWGENS 162
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQ+G++ N+ P ++ + K + IS GY+HS+ +T++GELY +G+ G+LGL K
Sbjct: 163 EGQIGLN-NVCNVYFPHEVT-VGKPIAWISCGYYHSAFVTMEGELYTFGEPEFGKLGLPK 220
Query: 160 ------KAAKVIP-IPTKV---ECLSG---IFTKQAALGF-------------------- 186
K +++P IP KV C G + T++A F
Sbjct: 221 QLLMNHKVPQLVPGIPEKVIQVACGGGHTVVLTEKAVYNFGLGQFGQLGLGTFVFETTEP 280
Query: 187 ------------------EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
+ +T G++ ++G G G+LG LG T+++
Sbjct: 281 KIMESVKDHKITYISCGENHTALITDIGRMYTFGDGRYGKLG-------LGMENFTNQFV 333
Query: 229 PRLIKELEGVKVKIAAAGFLH 249
P L KV + A G H
Sbjct: 334 PTLCPNFLRFKVHLVACGGCH 354
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 134/294 (45%), Gaps = 27/294 (9%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG + E P + E A+ACG HT+ +T+ G +Y G N G
Sbjct: 60 WGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAG 119
Query: 102 QLGISENIGYSLEPLRI-SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + + S P+ I S L V+ I+ G H+ AI ++G ++ WG+N GQLG G
Sbjct: 120 QLGTGD-LKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGN 178
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K PT+V ++ +AA G + ++ +T K+ +WG+ G+LG + +
Sbjct: 179 --TKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDKAV- 235
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P ++ L G+ HS + +N ++Y +G ++ H+
Sbjct: 236 -------LQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSP 288
Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGE----------LYTWGSNENGCLG 321
P L++ L +++ C GY CV E +Y+WG E G LG
Sbjct: 289 VPELVTALRSVRVQQIAC-GYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLG 341
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 133/292 (45%), Gaps = 24/292 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
WG YG+LGLG + P + + +++++ G +H+ + E G VY G
Sbjct: 4 WGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTWGRG 63
Query: 99 DFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG LEP + ++ ++ G +H+ +T +G +Y WG+N GQLG
Sbjct: 64 WEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGT 123
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + P+ L+ A G +VA+ G + SWG G+LGHG +
Sbjct: 124 GDLKSSNSPVLID-SALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTC 182
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKI---AAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
Y P ++ G+ KI AA G H+ + + ++Y +G A ++
Sbjct: 183 ---------YFP---TQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNR 230
Query: 275 GNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ A +P ++ L S V+CG H+ L ++YTWG N+ G LG+G
Sbjct: 231 SDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLG 282
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LG G+ ++ + P K ACGG HTL LT+ +YA G N +GQ
Sbjct: 166 WGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQ 225
Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG++ + L+P + L++ + GY HS A+ + ++Y WG+N GQLGLG
Sbjct: 226 LGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYT 285
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG---------GKVLSWGAGGSGRLGHG 212
P+P V L + +Q A G++ VA V SWG G G+LGH
Sbjct: 286 HS--PVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHN 343
Query: 213 QESSILGFLRSTSEYTPRLIK 233
+ S TPR+++
Sbjct: 344 E---------LLSRCTPRIVE 355
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 107/238 (44%), Gaps = 17/238 (7%)
Query: 92 VYATGLNDFGQLGI--SENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMW 147
VY+ G N +GQLG+ + N+ L +S +K V I G HS+ I DG++Y W
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G+ GQLG ++ P V + + A G +V VT G + +WG +G
Sbjct: 61 GRGWEGQLG-HDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAG 119
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
+LG G L+S++ +P LI L V A G H+ I G ++ +G
Sbjct: 120 QLGTGD-------LKSSN--SPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170
Query: 267 VDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ P+ + + CGG HT VLT ++Y WGSN G LG+
Sbjct: 171 CGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGL 228
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 61/133 (45%), Gaps = 16/133 (12%)
Query: 198 VLSWGAGGSGRLGHGQESSI---LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
V SWG G+LG G +++ G L L L V+ AG HSA I
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILS--------LSDPLNRKNVRSIGAGKSHSAVIA 52
Query: 255 ENGRVYIFGDRAVDKMLFQE--GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
E+G VY +G R + L + P ++ K+ S V CG HT V+T G +Y
Sbjct: 53 EDGDVYTWG-RGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIY 111
Query: 311 TWGSNENGCLGIG 323
TWG N+ G LG G
Sbjct: 112 TWGENKAGQLGTG 124
>gi|428171592|gb|EKX40507.1| hypothetical protein GUITHDRAFT_96261, partial [Guillardia theta
CCMP2712]
Length = 424
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 145/292 (49%), Gaps = 23/292 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+ ++G+LG GSL + P++ ++ A+A G ++ + G +++ G N GQ
Sbjct: 101 FGSNNFGQLGTGSLNNTVIPMIVPVLRNQNMSAVAAGEEFSVSSSLKGRLWSWGRNYRGQ 160
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG+++ G +L ++K V + HH+ A++ G L+ WG N GQLG G A
Sbjct: 161 LGLTD-AGINLCTYPPCSVEKSVKLTN---HHTLALSRSGILFAWGINHMGQLGTGDTAD 216
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P PTK + Q + G E S+AVT GKV WG+G SG+L GQ+S +G
Sbjct: 217 RFQPTPTKNS--KDLLFFQVSAGGEHSMAVTSLGKVYVWGSGSSGQL--GQDSLDIG--- 269
Query: 223 STSEYTPR------LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
+ PR L+ L+ + AAG+LHS + ++G ++I+G ++ +
Sbjct: 270 -PNSVEPRRSLEAILVPGLKDQFIVQVAAGWLHSIALSKDGEIWIWGGNRHGQLGLGDKL 328
Query: 277 HARRPSLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P + + + G H+ L S G +++ G N+ G LG+G
Sbjct: 329 NRFAPVKLQGKEFQMLGPVISIAAGHGHSLFLNSSGHVFSSGRNDAGQLGVG 380
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 42 LWGNGDYGRLGLGSLE---------SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
+WG+G G+LG SL+ ++ + + +A G H++ L++ G +
Sbjct: 252 VWGSGSSGQLGQDSLDIGPNSVEPRRSLEAILVPGLKDQFIVQVAAGWLHSIALSKDGEI 311
Query: 93 YATGLNDFGQLGISENIGYSLEPLRISGLKKE----VVQISTGYHHSSAITVDGELYMWG 148
+ G N GQLG+ + + P+++ G + + V+ I+ G+ HS + G ++ G
Sbjct: 312 WIWGGNRHGQLGLGDKLN-RFAPVKLQGKEFQMLGPVISIAAGHGHSLFLNSSGHVFSSG 370
Query: 149 KNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
+N GQLG+G + + +PIP ++ C + F + + F V V G KV
Sbjct: 371 RNDAGQLGVGNSIDRSSISFVPIPNRIWCDTP-FGSEVSPSFADYVCV--GSKV 421
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 22/191 (11%)
Query: 136 SAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S +T++ G++Y +G N+ GQLG G VIP+ V L A G E SV+ +
Sbjct: 89 STLTINEGDVYGFGSNNFGQLGTGSLNNTVIPM--IVPVLRNQNMSAVAAGEEFSVSSSL 146
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ SWG G+LG L Y P +++ VK+ H+ +
Sbjct: 147 KGRLWSWGRNYRGQLGLTDAGINL------CTYPPCSVEK----SVKLTNH---HTLALS 193
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
+G ++ +G + ++ G+ A R P+ SK +V GG H+ +TS G++Y
Sbjct: 194 RSGILFAWGINHMGQL--GTGDTADRFQPTPTKNSKDLLFFQVSAGGEHSMAVTSLGKVY 251
Query: 311 TWGSNENGCLG 321
WGS +G LG
Sbjct: 252 VWGSGSSGQLG 262
>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
Length = 1078
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 133/301 (44%), Gaps = 35/301 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG- 101
WG G G+LG P + + + +K +ACG T LT++G ++ G N +G
Sbjct: 329 WGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGG 388
Query: 102 QLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L E G P +ISG + ++ G H++A++ G+L+ +G + G LG G
Sbjct: 389 NLVCEERTGSQWLPRQISGPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGN 448
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-----------GGKVLSWGAGGSGR 208
+ + P +VE L G++ K A G + A+ GGK+ +WG G GR
Sbjct: 449 --LQSVSHPKEVESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGR 506
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGH L P + +L + G + + + G++Y G
Sbjct: 507 LGHADLEKKL---------QPTCVAQLVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHG 557
Query: 269 KMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ GN + I+ K + +E+ G YH LTSGG +YTWG NG LG+
Sbjct: 558 QL----GNPQAKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGL 613
Query: 323 G 323
G
Sbjct: 614 G 614
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD GRLG LE + +P + +H ++CG T+ LT TG +Y G + GQ
Sbjct: 499 WGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQ 558
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + S+ + LK+E V +IS+G +H +A+T G +Y WGK +NGQLGLG
Sbjct: 559 LGNPQAKNKSIAIVE-GKLKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVE 617
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ +PT VE L + A G + A+
Sbjct: 618 DR--NVPTLVEALRDRQVQSIACGSNLTAAI 646
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V IS G +H++ IT GE++ WG+ S G+ LG K + PT VE L G K A
Sbjct: 306 DVRNISLGRNHAALITKRGEVFCWGEGSRGK--LGHKVDMDVSSPTIVESLDGFLVKFVA 363
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKI 242
G Q+ A+T G++ WG G +++ R+ S++ PR I L GV +
Sbjct: 364 CGEYQTCALTDSGELFVWGENKYG-------GNLVCEERTGSQWLPRQISGPLAGVSISN 416
Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHT 300
A G H+A + +G+++ +GD + P + L + + V CG +HT
Sbjct: 417 VACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVACGSWHT 476
Query: 301 CVLTS-----------GGELYTWGSNENGCLG 321
+ GG+L+TWG + G LG
Sbjct: 477 AAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLG 508
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 16/163 (9%)
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
+P +E + + +LG + +T G+V WG G G+LGH + +
Sbjct: 295 LPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDV--------- 345
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
+P +++ L+G VK A G + + ++G ++++G+ L E + P I
Sbjct: 346 SSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQI 405
Query: 285 SKLPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S P + V CG +HT ++S G+L+T+G G LG G
Sbjct: 406 SG-PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHG 447
>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 382
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 122/250 (48%), Gaps = 21/250 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
L+ G +H+L + G V+A G + G L + P+ + GL ++V ++ G HS
Sbjct: 37 LSAGDSHSLAVHADGSVWAWGASASG-LREEGALSRRFAPVPVPGLS-DIVSVAAGGAHS 94
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG L+ WG N GQLG G A+ +P+ +V LSG+ + A G S+A+
Sbjct: 95 LAVRADGTLWTWGGNPYGQLGDGTTTARALPV--QVAGLSGV--RAVATGLGHSLALRAD 150
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G S L TPR I L GV+ +AA GF HS + +
Sbjct: 151 GTVWAWGLNQFGQLGDGTTSQWL---------TPRPIPGLSGVR-SVAAGGF-HSLVVRD 199
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+ V+ +G D +G+ +RR P I L V G YH+ + + G L WG
Sbjct: 200 DDTVWAWGSN--DYGELGDGSTSRRAVPRAIPGLRNVASVAGGCYHSLAVHADGTLSAWG 257
Query: 314 SNENGCLGIG 323
N G LG G
Sbjct: 258 LNSYGQLGDG 267
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 128/285 (44%), Gaps = 26/285 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG G+ +R PV + ++A+A G H+L L G V+A GLN FGQ
Sbjct: 106 WGGNPYGQLGDGTTTARALPVQVAGLS--GVRAVATGLGHSLALRADGTVWAWGLNQFGQ 163
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + L P I GL V ++ G HS + D ++ WG N G+LG G +
Sbjct: 164 LGDGTTSQW-LTPRPIPGLSG-VRSVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTSR 221
Query: 163 KVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ +P + G+ A G S+AV G + +WG G+LG G S
Sbjct: 222 RAVP-----RAIPGLRNVASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGTFS------ 270
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+ TPR + L G V+ A F HS + G V+ +G + +G +R+
Sbjct: 271 ---NRATPRPVPGLSG--VRCVATSFFHSLALRAEGTVWAWGLNGYGEQ--GDGTASRQS 323
Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L V G +H+ + + G + WG N G LG G
Sbjct: 324 PTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAWGHNGQGQLGDG 368
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 24/247 (9%)
Query: 43 WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG +G+LG G+ S+W RP+ + ++++A GG H+L + + V+A G ND
Sbjct: 156 WGLNQFGQLGDGT-TSQWLTPRPIPGLS----GVRSVAAGGFHSLVVRDDDTVWAWGSND 210
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G+LG ++ P I GL+ V ++ G +HS A+ DG L WG NS GQLG G
Sbjct: 211 YGELGDGSTSRRAV-PRAIPGLRN-VASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGT 268
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P P V LSG+ + A F S+A+ G V +WG G G G G S
Sbjct: 269 FSNRATPRP--VPGLSGV--RCVATSFFHSLALRAEGTVWAWGLNGYGEQGDGTASR--- 321
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
TPR + L GV A G HS ++ NG V +G ++ H
Sbjct: 322 -----QSPTPRPVPGLSGVLS--VATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRS 374
Query: 280 RPSLISK 286
P + K
Sbjct: 375 TPVTVLK 381
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
S PL +G + V +S G HS A+ DG ++ WG +++G G + + P+P V
Sbjct: 22 SAPPLGRAG-EGPRVPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRFAPVP--V 78
Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
LS I + A G S+AV G + +WG G+LG G +T+ P
Sbjct: 79 PGLSDIVS--VAAGGAHSLAVRADGTLWTWGGNPYGQLGDGT---------TTARALPVQ 127
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
+ L GV+ A G HS + +G V+ +G ++ + P I L
Sbjct: 128 VAGLSGVRA--VATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSGVR 185
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V GG+H+ V+ ++ WGSN+ G LG G
Sbjct: 186 SVAAGGFHSLVVRDDDTVWAWGSNDYGELGDG 217
>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
latipes]
Length = 527
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 129/272 (47%), Gaps = 19/272 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG L+S P + +L+ G G H + T G V+A G N + QLG +
Sbjct: 52 GCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVFAWGHNGYSQLG-NG 110
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P +S L K V +++ G HH+ A+T DGE++ WG N++GQ+G G A +
Sbjct: 111 TTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P P +V CL G S+AV G++ WG +G+LG G
Sbjct: 169 PTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNG--------- 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+GV V A G+ H+ + + G VY +G + ++ ++ P+LI
Sbjct: 220 NQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTLI 279
Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K E C HT T G++ WG
Sbjct: 280 NTDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P +V + + +ACG HT+ LT G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV + G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++ L G+ Q A G+ ++A+T G V +WGA G+LG G +S
Sbjct: 218 NGNQ--QTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKS---- 271
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ P LI + V++AA H SA ++G+V ++G
Sbjct: 272 -----NQALPTLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 115/245 (46%), Gaps = 16/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITVD 141
L++T V+A G N G LG+ + + ++EP RI L K++V +S G H T D
Sbjct: 35 LYVTVNDEVFALGTNCSGCLGLGD-LQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATAD 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N QLG G + P L G + A G ++A+T G+V +W
Sbjct: 94 GEVFAWGHNGYSQLGNGTTNHGLTPALVSTNLL-GKRVTEVACGSHHTIALTADGEVFAW 152
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
G SG++G G + ++ TPR + KV + G L S + +NG +Y
Sbjct: 153 GYNNSGQVGSGS---------TANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIY 203
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
+G ++ + + P I+ L +V CG HT LT G +Y WG+N G
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYG 263
Query: 319 CLGIG 323
LG G
Sbjct: 264 QLGTG 268
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +GQ
Sbjct: 205 WGYNCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG +L P I+ K+ +V+++ + H S+A T G++ MWG+
Sbjct: 265 LGTGNKSNQAL-PTLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWGQ 312
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 14/217 (6%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
++L P L ++ + + + +TV+ E++ G N +G LGLG + + P
Sbjct: 10 FALLPPEELRLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRID 69
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
V C I + G V T G+V +WG G +LG+G + L TP
Sbjct: 70 VLCGKKIVSLSYGTG-PHVVIATADGEVFAWGHNGYSQLGNGTTNHGL---------TPA 119
Query: 231 LIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
L+ L G +V A G H+ + +G V+ +G ++ + P +S
Sbjct: 120 LVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQ 179
Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S+ VV CG + + GE+Y WG N NG LG+G
Sbjct: 180 SKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLG 216
>gi|294816123|ref|ZP_06774766.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
gi|294328722|gb|EFG10365.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
Length = 527
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 137/293 (46%), Gaps = 25/293 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
WG G+LG ++ R+ P A K ++ LA G T + L V+ G
Sbjct: 155 WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 214
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
ND GQLG P R+ GL + Q++ G H+ A+ +G+ ++ WG N +
Sbjct: 215 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 273
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG K +P+P V+ L+G T A G E S+A+ GG +++WG G+LG+
Sbjct: 274 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGND 331
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
L ST P +K L V+I AAG S +G + +G+ ++
Sbjct: 332 T------ILLST---IPVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 381
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ P ++ LP +E +V GG H+ L S +Y WGSN+ G L G
Sbjct: 382 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADG 434
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 144/334 (43%), Gaps = 27/334 (8%)
Query: 1 MLGRSLTAMTKYYLKQDIK---LGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLE 57
M+ R KQD++ G+ + + L WG D G+LG G L
Sbjct: 168 MIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWGQNDKGQLGTG-LV 226
Query: 58 SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC----VYATGLNDFGQLGISENIGYSL 113
++ PV + + +A G H L L G V+A G N GQLG S N+ ++
Sbjct: 227 TKAIPVPGRVPGLNGITQVAAGSLHALALRNNGDPQDGVWAWGDNIHGQLGDSTNVPKTV 286
Query: 114 EPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P+ + GL + ++TG HS A+ G L WG N GQLG IP+ +V+
Sbjct: 287 -PVPVQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGNDTILLSTIPV--EVK 343
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L+ + AA G S+A G + +WG G G LG+GQ ++ L TP +
Sbjct: 344 NLTSPVVEIAA-GCNFSLARLADGTIKAWGENGHGELGNGQTANSL---------TPVSV 393
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--SKLPYS 290
L + AG HS + + RVY +G DK +G R + SKLP
Sbjct: 394 TGLPPGSAERIVAGGNHSYALYSDYRVYGWGSN--DKGQLADGTINPRTQAMQASKLPKV 451
Query: 291 EEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIG 323
+ G + LT G + + WG+N G LG G
Sbjct: 452 TSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSG 485
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 34/204 (16%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS----- 189
+ A+ D + WG N GQLG + P P + L +Q A G + +
Sbjct: 143 THAVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGF 200
Query: 190 -VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
VA+ V +WG G+LG G L + + P + L G+ AAG L
Sbjct: 201 AVALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSL 250
Query: 249 HSACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGG 297
H+ + NG V+ +G D + Q G+ P + +P + V G
Sbjct: 251 HALALRNNGDPQDGVWAWG----DNIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGC 305
Query: 298 YHTCVLTSGGELYTWGSNENGCLG 321
H+ L GG L WG+N+ G LG
Sbjct: 306 EHSLALREGGTLMAWGNNDKGQLG 329
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 27/291 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LGLG+ + + V A E ++++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L ++VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPGK 129
Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+ + + I IP + C + +Q A G SV +T G V SWG +
Sbjct: 130 DEMERPLRRDIVIPKR--CAPKLVVRQVAAGGTHSVVLTREGHVWSWG-----------Q 176
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
G ++ S P ++ LE V++ A G H+ ++ENG ++ +G+ ++ +
Sbjct: 177 PWPPGDIKQIS--IPVRVQGLE--NVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGD 232
Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+P + L ++ GG+H+ LT GE+Y WG E+G LG G
Sbjct: 233 TQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFG 283
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
W GD ++ + PV E +++ +A G H L L E G ++A G N++GQ
Sbjct: 178 WPPGDIKQISI--------PVRVQGLE--NVRLIAVGAFHNLALEENGTLWAWGNNEYGQ 227
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + S +P+ + GL +V I+ G HS+A+T GE+Y WG+ +G+LG G
Sbjct: 228 LGTGDTQPRS-QPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDND 286
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
+P KV L+G Q + G SVA+T G++ S+G G GRLG G++
Sbjct: 287 KSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGCGRK 339
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R +P+ + +L +A GG H+ LT+ G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 103 LGISENIGYS-LEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P +++ L ++++Q+S G HS A+T DG ++ +G+ +G+LG G+K
Sbjct: 280 LGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGCGRK 339
Query: 161 AAKVIP--IPTKVECLSGIFTKQA 182
P +P K+ G F A
Sbjct: 340 VTTGQPLDVPVKIPPPEGQFNDAA 363
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 61/170 (35%), Gaps = 53/170 (31%)
Query: 198 VLSWGAGGSGRLGHG-------------------------------------------QE 214
V++WG+G G+LG G +
Sbjct: 7 VIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQ 66
Query: 215 SSILGFLRST-SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
LG T +E P +K L VK+ AA G H +D+ GR Y +G + +
Sbjct: 67 RGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126
Query: 274 EGNHA-----RRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGS 314
G RR +I K + +V GG H+ VLT G +++WG
Sbjct: 127 PGKDEMERPLRRDIVIPKRCAPKLVVRQVAAGGTHSVVLTREGHVWSWGQ 176
>gi|254390852|ref|ZP_05006063.1| BNR repeat domain-containing protein [Streptomyces clavuligerus
ATCC 27064]
gi|197704550|gb|EDY50362.1| BNR repeat domain-containing protein [Streptomyces clavuligerus
ATCC 27064]
Length = 564
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 137/293 (46%), Gaps = 25/293 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
WG G+LG ++ R+ P A K ++ LA G T + L V+ G
Sbjct: 192 WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 251
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
ND GQLG P R+ GL + Q++ G H+ A+ +G+ ++ WG N +
Sbjct: 252 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 310
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
GQLG K +P+P V+ L+G T A G E S+A+ GG +++WG G+LG+
Sbjct: 311 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGND 368
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
L ST P +K L V+I AAG S +G + +G+ ++
Sbjct: 369 T------ILLST---IPVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 418
Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ ++ P ++ LP +E +V GG H+ L S +Y WGSN+ G L G
Sbjct: 419 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADG 471
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 131/289 (45%), Gaps = 24/289 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC----VYATGLN 98
WG D G+LG G L ++ PV + + +A G H L L G V+A G N
Sbjct: 250 WGQNDKGQLGTG-LVTKAIPVPGRVPGLNGITQVAAGSLHALALRNNGDPQDGVWAWGDN 308
Query: 99 DFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
GQLG S N+ ++ P+ + GL + ++TG HS A+ G L WG N GQLG
Sbjct: 309 IHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGN 367
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
IP+ +V+ L+ + AA G S+A G + +WG G G LG+GQ ++
Sbjct: 368 DTILLSTIPV--EVKNLTSPVVEIAA-GCNFSLARLADGTIKAWGENGHGELGNGQTANS 424
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
L TP + L + AG HS + + RVY +G DK +G
Sbjct: 425 L---------TPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSN--DKGQLADGTI 473
Query: 278 ARRPSLI--SKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIG 323
R + SKLP + G + LT G + + WG+N G LG G
Sbjct: 474 NPRTQAMQASKLPKVTSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSG 522
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 81/202 (40%), Gaps = 34/202 (16%)
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS------V 190
A+ D + WG N GQLG + P P + L +Q A G + + V
Sbjct: 182 AVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGFAV 239
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ V +WG G+LG G L + + P + L G+ AAG LH+
Sbjct: 240 ALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSLHA 289
Query: 251 ACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGGYH 299
+ NG V+ +G D + Q G+ P + +P + V G H
Sbjct: 290 LALRNNGDPQDGVWAWG----DNIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEH 344
Query: 300 TCVLTSGGELYTWGSNENGCLG 321
+ L GG L WG+N+ G LG
Sbjct: 345 SLALREGGTLMAWGNNDKGQLG 366
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 28/292 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+G+ G+LG+G+ E + + A E + ++++ G ++L + + G ++ G N G
Sbjct: 10 WGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
LG P ++ L +VQ + G H A+ G Y WG N GQ G
Sbjct: 70 LGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 129
Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
G+ + I IP + C S + +Q A G SV +T G V SWG
Sbjct: 130 KDDTGRPLRRDIVIPQR--CASKLVVRQVAAGGTHSVVLTREGHVWSWG----------- 176
Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
+ G ++ S P ++ LE +V++ A G H+ + E+G ++ +G+ ++
Sbjct: 177 QPWPPGDIKQIS--VPVRVQGLE--RVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +P + L ++ GG+H+ LT GE+Y WG E+G LG G
Sbjct: 233 DTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG 284
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
PV E+ ++ +A G H L L E G ++A G N++GQLG + S +P+ + GL
Sbjct: 190 PVRVQGLER--VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRS-QPITVQGL 246
Query: 122 KK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
+V I+ G HS+A+T DGE+Y WG+ +G+LG G +P +V L G
Sbjct: 247 SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIV 306
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
Q + G SVA+T G++ ++G G GRLG+G++
Sbjct: 307 QVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRK 340
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WGN +YG+LG G + R +P+ +L +A GG H+ LT+ G VY G + G+
Sbjct: 221 WGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGR 280
Query: 103 LGISENIGYS-LEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG +N S + P R++ L +++VQ+S G HS A+T DG +Y +G+ +G+LG G+K
Sbjct: 281 LGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRK 340
Query: 161 AAKVIPIPTKVE 172
P+ ++
Sbjct: 341 VTTGQPMEVPID 352
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 20/187 (10%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+ + + WG +GQLG+G K V+ L + G S+A+ GK
Sbjct: 1 MATESSVIAWGSGEDGQLGIGNNEEK--EWVCIVKALEPYKVRSVVAGSRNSLAICDDGK 58
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ +WG G LGH E+ +E P +K L V + AA G H +D+ G
Sbjct: 59 LFTWGWNQRGTLGHPPETK--------TENIPSQVKALANVNIVQAAIGGWHCLAVDDQG 110
Query: 258 RVYIFGDRAV------DKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGG 307
R Y +G + G RR +I + S+ +V GG H+ VLT G
Sbjct: 111 RAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREG 170
Query: 308 ELYTWGS 314
+++WG
Sbjct: 171 HVWSWGQ 177
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 137/303 (45%), Gaps = 40/303 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G G LG G P V A ++ +ACG HTL L++ G V++ G G+
Sbjct: 212 WGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGR 271
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITV---DGELYMWGKNSNGQLGLG 158
LG ++ P+RI GL+ + Q++ HS+A+ G L+ +G+N GQLG+
Sbjct: 272 LG-QGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQLGIP 330
Query: 159 KKAAKVIPIPTKVECLSGIF---TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
+ + + ++C+S + + A G S A+ G + WG SG+LG+G
Sbjct: 331 EDKL----LTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGN-- 384
Query: 216 SILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----- 267
TS P L++ +L V A G HSA I + GR++ GD
Sbjct: 385 -------YTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGA 437
Query: 268 -------DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
D + + R P+ + V CG HT V+T GGE++TWG + G L
Sbjct: 438 HLNDNQDDHVTYNVAVRVRVPTDFRCV----HVACGDSHTAVVTDGGEIFTWGRGKGGRL 493
Query: 321 GIG 323
G G
Sbjct: 494 GHG 496
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
++Y WG+ +NG LG G+ + P VE L G ++ A G ++A++ G+V SWG
Sbjct: 208 DIYTWGEGTNGMLGHGEDTQEA--HPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWG 265
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI---DENGRV 259
+G GRLG G LR +TP I LE + + A HSA + + G +
Sbjct: 266 SGYGGRLGQGH-------LR--DRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGAL 316
Query: 260 YIFGDRAVDKMLFQEG----NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+ FG+ ++ E ++ + S +S+ S V CG +H+ L G L+ WG N
Sbjct: 317 FSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKIS-RVACGSFHSAALAEHGSLWLWGCN 375
Query: 316 ENGCLGIG 323
E+G LG G
Sbjct: 376 ESGQLGNG 383
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSA---FEKHSLKALACGGAHTLFLTETGCVYATGLN 98
LWG + G+LG G+ S P + A ++ +ACG H+ F+T+ G ++ G N
Sbjct: 371 LWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDN 430
Query: 99 DFGQLGI------SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
+GQLG +++ Y++ V ++ G H++ +T GE++ WG+
Sbjct: 431 TYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKG 490
Query: 153 GQLGLGKKAAKVIPIPTKV 171
G+LG G + +P ++
Sbjct: 491 GRLGHGDNLNRHLPTEIEI 509
>gi|418694952|ref|ZP_13255978.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri str. H1]
gi|421108363|ref|ZP_15568903.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri str. H2]
gi|409957111|gb|EKO16026.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri str. H1]
gi|410006629|gb|EKO60380.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
kirschneri str. H2]
Length = 431
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 130/263 (49%), Gaps = 26/263 (9%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYH 133
L+ GGAH+ FL G +Y G N+FGQLG + G ++ RI + + ++ I +
Sbjct: 56 LSAGGAHSGFLIN-GELYTVGRNNFGQLGTGISTGDNIND-RIMKVDRIRDIFSIHFNQN 113
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKK---------AAKVIPIPTKVECLSGIFTKQAAL 184
+S AI+ G +Y WG NS GQLG+G A P PT++ ++ A
Sbjct: 114 NSMAISQSGRVYTWGANSKGQLGIGNNNTDPAKASDAGNRQP-PTEIPGINNAV--MGAY 170
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
GF ++ + G V+++G G+LG+G+ + R++ P + +L V I
Sbjct: 171 GFNHALILKSDGTVVAFGQNNVGQLGNGENN----LNRNSFSSNPVNVVQLRNVIQVI-- 224
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
AG HSA + ENG VYI+G + + N + P + L +++ G H
Sbjct: 225 AGSEHSAALTENGEVYIWGRNQYGNLGNGIISPANTVQSVPVKVEGLSKIKQIANGRDHI 284
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
LTS G++Y+WG N +G LGIG
Sbjct: 285 LALTSDGKIYSWGLNASGQLGIG 307
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 134/299 (44%), Gaps = 33/299 (11%)
Query: 43 WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
WG G+LG+G+ + R P + A G H L L G V
Sbjct: 127 WGANSKGQLGIGNNNTDPAKASDAGNRQPPTEIPGINNAVMGAY--GFNHALILKSDGTV 184
Query: 93 YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
A G N+ GQLG EN +S P+ + L+ V+Q+ G HS+A+T +GE+Y+WG
Sbjct: 185 VAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLR-NVIQVIAGSEHSAALTENGEVYIWG 243
Query: 149 KNSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
+N G LG G A V +P KVE LS I KQ A G + +A+T GK+ SWG S
Sbjct: 244 RNQYGNLGNGIISPANTVQSVPVKVEGLSKI--KQIANGRDHILALTSDGKIYSWGLNAS 301
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DR 265
G+LG G + T I+++ + AG S I +NG V +G +
Sbjct: 302 GQLGIGGNGNPPPTPIPTQILN---IQDVASI-----WAGGTQSFAILKNGEVKGWGANG 353
Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + E N + + + VV CG H L GE+Y WG N G LG
Sbjct: 354 NMASLALGESNTQKVYEPNKAVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLG 412
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP-TKVECLSGIFTKQAAL 184
++S G HS ++GELY G+N+ GQLG G I KV+ + IF+ +
Sbjct: 54 TKLSAGGAHS-GFLINGELYTVGRNNFGQLGTGISTGDNINDRIMKVDRIRDIFS----I 108
Query: 185 GFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
F Q S+A++ G+V +WGA G+LG G ++ P E+ G+ +
Sbjct: 109 HFNQNNSMAISQSGRVYTWGANSKGQLGIGNNNTDPAKASDAGNRQPP--TEIPGINNAV 166
Query: 243 AAA-GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-----PSLISKLPYSEEVVCG 296
A GF H+ + +G V FG V ++ E N R P + +L +V+ G
Sbjct: 167 MGAYGFNHALILKSDGTVVAFGQNNVGQLGNGENNLNRNSFSSNPVNVVQLRNVIQVIAG 226
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
H+ LT GE+Y WG N+ G LG G
Sbjct: 227 SEHSAALTENGEVYIWGRNQYGNLGNG 253
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 83/195 (42%), Gaps = 11/195 (5%)
Query: 42 LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG YG LG G + + PV K +K +A G H L LT G +Y+ GL
Sbjct: 241 IWGRNQYGNLGNGIISPANTVQSVPVKVEGLSK--IKQIANGRDHILALTSDGKIYSWGL 298
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
N GQLGI N P+ L ++V I G S AI +GE+ WG N N L
Sbjct: 299 NASGQLGIGGNGNPPPTPIPTQILNIQDVASIWAGGTQSFAILKNGEVKGWGANGNMASL 358
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG+ + + P K + GI G + A+ G G++ WG G LG
Sbjct: 359 ALGESNTQKVYEPNK--AVVGIDNVVHFGCGATHNFALLGNGEIYGWGWNFKGSLGRNDL 416
Query: 215 SSILGFLRSTSEYTP 229
+ LG S P
Sbjct: 417 QNNLGGPNPVSINIP 431
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 28/250 (11%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSS 136
G H L L+ G + E YS++ LR + +K+++QI+ G +HS
Sbjct: 105 GAEHMLILSSDGKPF-------------EYDNYSMKHLRFESILQEKKIIQITCGDYHSL 151
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A++ GEL+ WG+N +GQLG+G+K P VE L+G+ Q + G S+A++ G
Sbjct: 152 ALSKGGELFAWGQNLHGQLGVGRKFPSTT-TPQIVEHLAGVPLAQISAGEAHSMALSMSG 210
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+ SWG G+LG G + S+ P LI+ L+ +V+ A G HSA + ++
Sbjct: 211 NIYSWGKNEFGQLGLGH---------TESKDYPSLIEALDNQEVEFLACGGSHSALLTQD 261
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSG-GELYTWG 313
G ++ FG ++ + RP L+++L ++ CG +HT S G+++++G
Sbjct: 262 GLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFG 321
Query: 314 SNENGCLGIG 323
S ++G LG G
Sbjct: 322 SGKDGQLGNG 331
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 25/267 (9%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGLG +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESK--DYPSLIEALDNQEVEFLAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELVGNRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYHT 300
G H+ A + + G+V+ FG ++ GN R LI K+ SEE+ + +
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQL----GNGGTRDQLIPLPVKVSSSEELKLETHTS 357
Query: 301 ---CVLTSGGE--LYTWGSNENGCLGI 322
++ +GG + W EN + +
Sbjct: 358 EKELIMIAGGNQSILLWIKKENSYVNL 384
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG ++G+LGLG ES+ P + A + ++ LACGG+H+ LT+ G ++ G GQ
Sbjct: 215 WGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G +GQLG G
Sbjct: 275 LG-HNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 161 AAKVIPIPTKV 171
++IP+P KV
Sbjct: 334 RDQLIPLPVKV 344
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LG+G S P + L ++ G AH++ L+ +G +Y+ G N+FG
Sbjct: 162 WGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFG 221
Query: 102 QLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QLG+ +E+ Y P I L + V+ ++ G HS+ +T DG L+ +G +GQLG
Sbjct: 222 QLGLGHTESKDY---PSLIEALDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHN 278
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
++ P V L G Q A G ++A V+ GKV S+G+G G+LG+G
Sbjct: 279 STQNEL--RPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNG 331
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 136/287 (47%), Gaps = 17/287 (5%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ +G+LGLG +E P +++ +ACG HTLFLT G VYA G ND
Sbjct: 10 WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDH 69
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG + PL I L+ VV QIS G HS A++ G++ WG N GQLG
Sbjct: 70 SQLGHELP---TKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHAT 126
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+++ +P V L Q A G S+A+T G++ SWG+ G+LG +
Sbjct: 127 D-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-- 183
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHA 278
T P + L G+ + A G HS I ++G V+ +G ++ L E N A
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRA 239
Query: 279 RRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ + L V CG + LT+ G ++T G+ G LG G
Sbjct: 240 -YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 133/283 (46%), Gaps = 16/283 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ D+ +LG L ++ RP++ + + + ++CG H+L L+E G V + G ND GQL
Sbjct: 65 GSNDHSQLG-HELPTK-RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQL 122
Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
G + + P + L K VVQI+ G +HS A+T GELY WG N GQLG+ K
Sbjct: 123 GHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKD 182
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P ++ L GI A G S ++ G V WG G+LG E+
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEA------ 236
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ P +K L + V+ A G S + G V+ G A ++ ++ P
Sbjct: 237 ---NRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLG 321
++ +L S +V CG HT L S G +Y +G +G LG
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLG 336
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 90/188 (47%), Gaps = 22/188 (11%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG S+GQLGLG + I P+++ +Q A G ++ +T GKV + G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
+ +LGH + P LI EL+ V + G HS + E G+V +
Sbjct: 66 SNDHSQLGHELPTK-----------RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSW 114
Query: 263 GD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
GD A DK + Q R+ L+SK ++ CG H+ LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170
Query: 316 ENGCLGIG 323
G LG+
Sbjct: 171 IYGQLGVN 178
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 14/184 (7%)
Query: 43 WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+ YG+LG+ S + P+ + L A+ACGG H+ ++++G V+ G N+
Sbjct: 167 WGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 100 FGQLGISE--NIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG+++ N Y L+ LR G++ ++ G S +T +G ++ G + GQL
Sbjct: 227 CGQLGLNDEANRAYPTQLKTLRTLGVRF----VACGDEFSVFLTNEGGVFTCGAGAYGQL 282
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQE 214
G G + +++P V L G Q A G ++A V G+V ++G G SG+LG
Sbjct: 283 GHGFSSNEMLP--RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340
Query: 215 SSIL 218
S++
Sbjct: 341 KSLM 344
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL +R P ++ +ACG ++FLT G V+ G +GQ
Sbjct: 222 WGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
LG + L + + + + Q++ G H+ A+ G +Y +G S+GQLG
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341
Query: 162 AKVIP 166
+ ++P
Sbjct: 342 SLMLP 346
>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
Length = 1224
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 26/284 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG YG+LG S +R+ PV S + A++ G H+L L G V+A G N +GQ
Sbjct: 763 WGYNGYGQLGDDSTTTRYSPVQVSTLTNWT--AVSAGENHSLALKSDGTVWAFGYNGYGQ 820
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG P+++ L VV I+ G S A+ DG ++ WG+N+ G+LG G
Sbjct: 821 LG-DGTTSSQRTPVQVKDLTG-VVAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTR 878
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+P+ +V L+ + K A G VA+ G V +WG G+G LG+
Sbjct: 879 SSVPV--QVALLTDV--KAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSS--------- 925
Query: 223 STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
+ S+ TP GV +K AAG H+ + +G V+ +G ++ GN+ R
Sbjct: 926 TISQSTP----VQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQL--GSGNNTSRS 979
Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P+ I L + G + + G LY+WG N NG LG G
Sbjct: 980 VPAAIPGLASMASIAAGENQSIAYGNDGILYSWGRNANGQLGNG 1023
Score = 98.2 bits (243), Expect = 4e-18, Method: Composition-based stats.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 20/281 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LG G+ S P +K +A G HT+ L G ++ G N +GQ
Sbjct: 713 WGYNGHGQLGTGTSNSTSVP--GKVINLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQ 770
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG ++ P+++S L +S G +HS A+ DG ++ +G N GQLG G ++
Sbjct: 771 LG-DDSTTTRYSPVQVSTLTNWTA-VSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSS 828
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ +V+ L+G+ A F S+A+ G V SWG G LG+G + R
Sbjct: 829 QRTPV--QVKDLTGVVAIAAGKDF--SLALKSDGTVWSWGQNTYGELGNGTTT------R 878
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
S+ L+ + VK AAG H + ++G V+ +G + L ++
Sbjct: 879 SSVPVQVALLTD-----VKAIAAGDYHGVALKKDGSVFAWGYNG-NGELGNSSTISQSTP 932
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ S + + + G YHT L S G +++WG N G LG G
Sbjct: 933 VQSGVTGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGSG 973
Score = 91.7 bits (226), Expect = 4e-16, Method: Composition-based stats.
Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 21/249 (8%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL--EPLRISGLKKEVVQISTGY 132
A++ G HT+F+ G V+ G N GQLG + S+ + + ++G+K I+ G
Sbjct: 693 AVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMK----MIAGGE 748
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+H+ A+ DG L+ WG N GQLG + P+ +V L+ A G S+A+
Sbjct: 749 NHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPV--QVSTLTNWTAVSA--GENHSLAL 804
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G V ++G G G+LG G SS + TP +K+L GV V IAA G S
Sbjct: 805 KSDGTVWAFGYNGYGQLGDGTTSS---------QRTPVQVKDLTGV-VAIAA-GKDFSLA 853
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+ +G V+ +G ++ + P ++ L + + G YH L G ++ W
Sbjct: 854 LKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVKAIAAGDYHGVALKKDGSVFAW 913
Query: 313 GSNENGCLG 321
G N NG LG
Sbjct: 914 GYNGNGELG 922
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 15/191 (7%)
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+H+ I DG ++ WG N +GQLG G + +P KV L+G+ K A G +VA+
Sbjct: 699 NHTMFIKSDGTVWGWGYNGHGQLGTG--TSNSTSVPGKVINLTGM--KMIAGGENHTVAL 754
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
G + +WG G G+LG +T+ Y+P + L +AG HS
Sbjct: 755 RSDGTLHTWGYNGYGQLGDDS---------TTTRYSPVQVSTLTNWTA--VSAGENHSLA 803
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
+ +G V+ FG ++ + R P + L + G + L S G +++W
Sbjct: 804 LKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTGVVAIAAGKDFSLALKSDGTVWSW 863
Query: 313 GSNENGCLGIG 323
G N G LG G
Sbjct: 864 GQNTYGELGNG 874
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G LG S S+ PV +K +A G HTL L G V++ G N +GQ
Sbjct: 913 WGYNGNGELGNSSTISQSTPVQSGV---TGIKGIAAGPYHTLALKSDGTVWSWGYNGYGQ 969
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG N S+ P I GL + I+ G + S A DG LY WG+N+NGQLG G
Sbjct: 970 LGSGNNTSRSV-PAAIPGLA-SMASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVD 1027
Query: 163 KVIP 166
+P
Sbjct: 1028 TNVP 1031
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 11/166 (6%)
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G ++A P+ G +L ++ + G V WG G G+LG G
Sbjct: 670 GNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGT---- 725
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S S P + L G +K+ A G H+ + +G ++ +G ++
Sbjct: 726 -----SNSTSVPGKVINLTG--MKMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTT 778
Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +S L V G H+ L S G ++ +G N G LG G
Sbjct: 779 RYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDG 824
>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 746
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 125/281 (44%), Gaps = 19/281 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+LG G+ R P A++ GG ++L L G V A G N +GQ
Sbjct: 69 WGDNASGQLGDGTTTQRSSPTAVPGLA--GAVAVSAGGEYSLALLGDGTVRAWGNNTYGQ 126
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P + GL VV I+ G +H+ A+ DG + WG N+ GQLG G
Sbjct: 127 LG-DGTTPHRASPGAVPGLSG-VVAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQ 184
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ P+ V L+G+ A G S+AV G V +WG GRLG G
Sbjct: 185 RRTPV--AVLGLTGVVAIAA--GENHSLAVLADGTVRAWGNNTYGRLGDGT--------- 231
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
+T +P L+ L GV AAG HS + +G V +G A ++ P
Sbjct: 232 TTQRTSPVLVSSLTGVTAI--AAGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRATPV 289
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ L E+ GG H+ L + G WGSN +G LG G
Sbjct: 290 AVPGLTGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDG 330
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 22/284 (7%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG+ G+LG G++ +R PV+ S+ + AL+ GG H+L L G A G N
Sbjct: 316 ARAWGSNVSGQLGDGTVSNRTSPVLVSSLT--GVTALSAGGNHSLALLADGTARAWGANV 373
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG +L P+ + GL V ++ G +HS A+ +G + WG N+ GQLG G
Sbjct: 374 SGQLGDGTTTQRTL-PVGLPGLTG-VAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGS 431
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + P+ V L+G+ + A G++ S+A+ G V +WG SG+LG G
Sbjct: 432 TAQRTAPV--VVPALTGVVSLTA--GYDHSLALLSDGTVRAWGNNASGQLGDGT------ 481
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ TP + L V V ++ H+ + +G V +G ++ +G+ +
Sbjct: 482 ---TNQRGTPVQVSGLTNV-VALSGGKLYHALALLSDGTVRAWGYNMNGQL--GDGSTSN 535
Query: 280 R--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
R P +S L + GG ++ L S G + +WG G LG
Sbjct: 536 RWTPVAVSGLTNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLG 579
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 130/284 (45%), Gaps = 24/284 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GRLG G+ R PV + ++ GG H+L L G A G N GQ
Sbjct: 269 WGYNASGRLGDGTTTQRATPVAVPGLT--GVTEISAGGGHSLALLADGTARAWGSNVSGQ 326
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + P+ +S L V +S G +HS A+ DG WG N +GQLG G
Sbjct: 327 LG-DGTVSNRTSPVLVSSLTG-VTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQ 384
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ +P+ + L+G+ A G S+AV G V +WG G+LG G
Sbjct: 385 RTLPV--GLPGLTGVAALAA--GGYHSLAVLANGTVRAWGHNTYGQLGDG---------- 430
Query: 223 STSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
ST++ T P ++ L GV V + AG+ HS + +G V +G+ A ++ N P
Sbjct: 431 STAQRTAPVVVPALTGV-VSL-TAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTP 488
Query: 282 SLISKLPYSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+S L + + GG YH L S G + WG N NG LG G
Sbjct: 489 VQVSGL-TNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDG 531
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 126/284 (44%), Gaps = 18/284 (6%)
Query: 40 AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
A WG G+LG G+ R PV + ALA GG H+L + G V A G N
Sbjct: 366 ARAWGANVSGQLGDGTTTQRTLPVGLPGLT--GVAALAAGGYHSLAVLANGTVRAWGHNT 423
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+GQLG + P+ + L VV ++ GY HS A+ DG + WG N++GQLG G
Sbjct: 424 YGQLG-DGSTAQRTAPVVVPALTG-VVSLTAGYDHSLALLSDGTVRAWGNNASGQLGDGT 481
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P+ +V L+ + ++A+ G V +WG +G+LG G S
Sbjct: 482 TNQRGTPV--QVSGLTNVVALSGGK-LYHALALLSDGTVRAWGYNMNGQLGDGSTS---- 534
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +TP + L V V IAA G +S + NG V +G + ++
Sbjct: 535 -----NRWTPVAVSGLTNV-VAIAAGGD-YSLALQSNGTVQSWGYGVYGPLGRDYDTYSP 587
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + + + G H L + G +Y WG N+ G LG G
Sbjct: 588 TPKAVPGVTNVVAIAAGANHVLALRADGTVYAWGRNDFGQLGDG 631
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 136/325 (41%), Gaps = 55/325 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ YG+LG GS R PVV A + +L G H+L L G V A G N GQ
Sbjct: 419 WGHNTYGQLGDGSTAQRTAPVVVPALT--GVVSLTAGYDHSLALLSDGTVRAWGNNASGQ 476
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG-YHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG P+++SGL VV +S G +H+ A+ DG + WG N NGQLG G +
Sbjct: 477 LG-DGTTNQRGTPVQVSGLTN-VVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTS 534
Query: 162 AKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES----- 215
+ P+ +SG+ A A G + S+A+ G V SWG G G LG ++
Sbjct: 535 NRWTPV-----AVSGLTNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTP 589
Query: 216 ------------------------------------SILGFLRSTSEYTPRLIKELEGVK 239
LG + TP + L V
Sbjct: 590 KAVPGVTNVVAIAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLTNV- 648
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGY 298
V IA G+ HS + +G VY +G ++ N+ + P+ + L V GG
Sbjct: 649 VAIAT-GWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVAVTAGGN 707
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
+ L S G ++ WG N +G LG G
Sbjct: 708 QSLALLSSGAVHAWGDNSHGELGNG 732
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 110/248 (44%), Gaps = 17/248 (6%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
LA G AH+L T G V A G N GQLG S P + GL V +S G +S
Sbjct: 50 LASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRS-SPTAVPGLAGAVA-VSAGGEYS 107
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ DG + WG N+ GQLG G + P V LSG+ A G ++A+
Sbjct: 108 LALLGDGTVRAWGNNTYGQLGDGTTPHRA--SPGAVPGLSGVVAIAA--GNNHALALLSD 163
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V +WG G+LG G +T TP + L GV V I AAG HS +
Sbjct: 164 GTVRAWGYNAYGQLGDGT---------TTQRRTPVAVLGLTGV-VAI-AAGENHSLAVLA 212
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
+G V +G+ ++ P L+S L + G H+ + + G + WG N
Sbjct: 213 DGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGANHSLAVLADGTVRAWGYN 272
Query: 316 ENGCLGIG 323
+G LG G
Sbjct: 273 ASGRLGDG 280
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
PLR SG V++++G HS T DG + WG N++GQLG G + PT V
Sbjct: 38 RPLR-SG-SPRAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQR--SSPTAVPG 93
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L+G A G E S+A+ G G V +WG G+LG G + +P +
Sbjct: 94 LAGAVAVSA--GGEYSLALLGDGTVRAWGNNTYGQLGDGT---------TPHRASPGAVP 142
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
L GV V I AAG H+ + +G V +G A ++ R P + L +
Sbjct: 143 GLSGV-VAI-AAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVVAI 200
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G H+ + + G + WG+N G LG G
Sbjct: 201 AAGENHSLAVLADGTVRAWGNNTYGRLGDG 230
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D+G+LG G+ R PV + A+A G H+L L G VYA G N Q
Sbjct: 620 WGRNDFGQLGDGTTVQRNTPVQVPGLTN--VVAIATGWDHSLALRADGTVYAWGYNYARQ 677
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG Y P + GL VV ++ G + S A+ G ++ WG NS+G+LG G
Sbjct: 678 LGDGSTANYRQTPAPVPGLTN-VVAVTAGGNQSLALLSSGAVHAWGDNSHGELGNGSTLT 736
Query: 163 KVIPI 167
P+
Sbjct: 737 PPAPV 741
>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 531
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 125/270 (46%), Gaps = 19/270 (7%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
LG G +S P +K+L+ G G H L TE G VYA G N + QLG +
Sbjct: 54 LGTGDNQSTIVPKKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGHNGYSQLG-NGTT 112
Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
+ P++I + K+V +++ G HHS A+ DGE+Y WG N+ GQ+G G A + P
Sbjct: 113 NQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQ--PT 170
Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 171 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LI 284
TP + L V V G+ H+ + + G +Y +G ++ ++ P+ ++
Sbjct: 223 -TPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLSPAQIMV 281
Query: 285 SKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 282 EKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P+ +C+ + +ACG H++ L + G VYA G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P +V L + Q G+ ++A+T G + +WGA G+LG G +S++L
Sbjct: 218 NGNQL--TPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAQIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P +I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ +P T C +F
Sbjct: 317 -SVTLPHLTHFSCTDDVF 333
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P I+ ++K V T + + +T E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEIASIRKACV-FGTSANEAIYVTHSDEVFVFGVNCSNCLGTGDNQSTI--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
LSG K + G V + T G V +WG G +LG+G + + ++ T +
Sbjct: 70 LLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGHNGYSQLGNGTTNQGIAPIQIC---TNLM 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + ++G VY +G ++ + P ++ + +
Sbjct: 127 IKQVTEV-----ACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLG 216
>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 479
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 15/252 (5%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++KA+A G HT+ L G V+A G ND GQLG ++ P+++ G+ +VV I+ G
Sbjct: 227 TVKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTI-PVQVKGIS-DVVAIAAG 284
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+H+ A+ DG ++ WG N + QLG + P +V+ +S + K A G +V
Sbjct: 285 MYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDV--KAIAAGASYTVV 342
Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
+ G V +WG G+LG G + + +TP + + VK AAG H+
Sbjct: 343 LKNDGTVWAWGVNEYGKLGDG---------TTNNSFTPVQVNGISNVKA--IAAGAYHTV 391
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
+ +G V+ +G ++ + P + + + + G HT L + G ++
Sbjct: 392 VLKNDGTVWTWGYNHYGELGNGTTVDSSTPVQVKGISDVKAIAAGACHTVALKNDGTVWA 451
Query: 312 WGSNENGCLGIG 323
WG N G LG G
Sbjct: 452 WGCNYYGELGNG 463
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G+ +R PV + A+A G HT+ L G V+A G N+ Q
Sbjct: 250 WGWNDCGQLGDGTTTNRTIPVQVKGIS--DVVAIAAGMYHTVALKNDGTVWAWGDNEHDQ 307
Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + Y P+++ G+ +V I+ G ++ + DG ++ WG N G+LG G
Sbjct: 308 LGNETTKEEYHSTPVQVKGI-SDVKAIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGTTN 366
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
P+ +V +S + K A G +V + G V +WG G LG+G
Sbjct: 367 NSFTPV--QVNGISNV--KAIAAGAYHTVVLKNDGTVWTWGYNHYGELGNG--------- 413
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ TP +K + VK AAG H+ + +G V+ +G
Sbjct: 414 TTVDSSTPVQVKGISDVKA--IAAGACHTVALKNDGTVWAWG 453
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ ++ +LG + + + +KA+A G ++T+ L G V+A G+N++G+
Sbjct: 300 WGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVLKNDGTVWAWGVNEYGK 359
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG S P++++G+ V I+ G +H+ + DG ++ WG N G+LG G
Sbjct: 360 LG-DGTTNNSFTPVQVNGI-SNVKAIAAGAYHTVVLKNDGTVWTWGYNHYGELGNGTTVD 417
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
P+ +V+ +S + K A G +VA+ G V +WG G LG+G
Sbjct: 418 SSTPV--QVKGISDV--KAIAAGACHTVALKNDGTVWAWGCNYYGELGNG 463
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +YG+LG G+ + + PV + ++KA+A G HT+ L G V+ G N +G+
Sbjct: 352 WGVNEYGKLGDGTTNNSFTPVQVNGIS--NVKAIAAGAYHTVVLKNDGTVWTWGYNHYGE 409
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + S P+++ G+ +V I+ G H+ A+ DG ++ WG N G+LG G
Sbjct: 410 LGNGTTVDSST-PVQVKGIS-DVKAIAAGACHTVALKNDGTVWAWGCNYYGELGNGTAVD 467
Query: 163 KVIPIPTK 170
P+ K
Sbjct: 468 SSTPVQVK 475
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 19/272 (6%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG L+S P + +L+ G G H T G V++ G N + QLG
Sbjct: 52 GCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATADGEVFSWGHNGYSQLGNGT 111
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ + L P +S L K V++++ G HH+ A+T DGE++ WG N++GQ+G G A +
Sbjct: 112 ST-HGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ-- 168
Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
P P +V CL A G S+AV G++ WG +G+LG G
Sbjct: 169 PTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNG--------- 219
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
++ TP I L+GV V A G+ H+ + + G VY +G + ++ + P+LI
Sbjct: 220 NQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAVPTLI 279
Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
+ K SE C HT T G++ WG
Sbjct: 280 NTEKERMSEVAACHTSHTSAAKTQSGQVLMWG 311
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ P +V + + +ACG HT+ LT G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P R+S K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ P ++ L G+ Q A G+ ++A+T G V SWGA G+LG G +
Sbjct: 218 NGNQ--QTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKC---- 271
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ P LI + ++AA H SA ++G+V ++G
Sbjct: 272 -----NQAVPTLINTEKERMSEVAACHTSHTSAAKTQSGQVLMWG 311
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 118/245 (48%), Gaps = 16/245 (6%)
Query: 84 LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITVD 141
L++T V+A G N G LG+ + + ++EP RI L K++V +S G H + T D
Sbjct: 35 LYVTVNDEVFALGTNCSGCLGLGD-LQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATAD 93
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
GE++ WG N QLG G + P L G + A G ++A+T G+V +W
Sbjct: 94 GEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLL-GKRVIEVACGSHHTIALTTDGEVFAW 152
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
G SG++G G + ++ TPR + KV + A G L S + ++G +Y
Sbjct: 153 GYNNSGQVGSGS---------TANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIY 203
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
+G ++ + + P I+ L +V CG HT LT G +Y+WG+N G
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYG 263
Query: 319 CLGIG 323
LG G
Sbjct: 264 QLGTG 268
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 14/217 (6%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
++L P L ++ + + + +TV+ E++ G N +G LGLG + + P
Sbjct: 10 FALLPPEELKLIRQACVFGSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRID 69
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
V C I + G ++A T G+V SWG G +LG+G ST TP
Sbjct: 70 VLCGKKIVSLSYGTGPHVAIA-TADGEVFSWGHNGYSQLGNG---------TSTHGLTPA 119
Query: 231 LIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
L+ L G +V A G H+ + +G V+ +G ++ + P +S
Sbjct: 120 LVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQ 179
Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ VV CG + + GE+Y WG N NG LG+G
Sbjct: 180 NKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLG 216
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ P +A + ++ +ACG AHT+ LT+ G VY+ G N +GQ
Sbjct: 205 WGYNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
LG ++ P I+ K+ + +++ + H S+A T G++ MWG+
Sbjct: 265 LGTGNKCNQAV-PTLINTEKERMSEVAACHTSHTSAAKTQSGQVLMWGQ 312
>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
Length = 821
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 52/292 (17%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFGQLGISENIGYSLEP---- 115
+P + A E + L+CG +H+ + E+G VY GL G+LG +EN G EP
Sbjct: 150 QPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLG-NENEGVVQEPQVLE 208
Query: 116 -LRIS-GLKKEVVQISTGYHHSSAI----------TVDGELYMWGKNSNGQLGLGKKAA- 162
L+I+ +K +V+QIS G +H+ A+ T +L++WG N QLG+ +A
Sbjct: 209 CLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADG 268
Query: 163 ---------------KVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAG 204
++ P P + + + ++ Q + S A+T G V +WG+G
Sbjct: 269 NNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNVYTWGSG 328
Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
GRLG ++ + P+++KEL G +V + G+ H A I E G+V+ +G
Sbjct: 329 EFGRLG---------YMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQVFSWG- 378
Query: 265 RAVDKML----FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
R ++ L + R S + + + ++ CG HT LT+ GE+Y+W
Sbjct: 379 RGINGQLGHGSVLNEDQVRPVSALQNI-HIIDISCGESHTLALTNKGEVYSW 429
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 140/317 (44%), Gaps = 50/317 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFL----------T 87
WG G GRLG + P V + K + ++CG HTL L T
Sbjct: 185 WGLGLNGRLGNENEGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGET 244
Query: 88 ETGCVYATGLNDFGQLGISE---------------NIGYSLEPLRIS------GLKKEVV 126
++ G ND QLG+ ++ + L+P +++
Sbjct: 245 SQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLI 304
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALG 185
+ Y++S+A+T +G +Y WG G+ G LG K P P ++ L+G + +LG
Sbjct: 305 GVHASYYYSAALTSNGNVYTWGS---GEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLG 361
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
+ A+T G+V SWG G +G+LGHG S+L +E R + L+ + + +
Sbjct: 362 YYHGAAITEQGQVFSWGRGINGQLGHG---SVL------NEDQVRPVSALQNIHIIDISC 412
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLT 304
G H+ + G VY +G + ++ + P ++ L + ++ G H+ LT
Sbjct: 413 GESHTLALTNKGEVYSWGGGQLGQLGHGDFLRQSLPIKVANLEDNIAQISAGKRHSSALT 472
Query: 305 SGGELYTWGSNENGCLG 321
G+L+TWGSNE G LG
Sbjct: 473 DDGKLFTWGSNEYGQLG 489
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 125/316 (39%), Gaps = 64/316 (20%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTET--GCVYATGLNDFGQLGIS-----------E 107
RP A EK+++ + CG T +T++ V++ G N +LG S
Sbjct: 84 RPERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSS 143
Query: 108 NIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVI 165
+I +P + L+ + + +S G HS A + + G +Y WG NG+ LG + V+
Sbjct: 144 SIQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGR--LGNENEGVV 201
Query: 166 PIPTKVECLS-----GIFTKQAALGFEQSVAV----------TGGGKVLSWGAGGSGRLG 210
P +ECL + Q + G ++A+ T K+ WG +LG
Sbjct: 202 QEPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLG 261
Query: 211 ---------------------HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
H + Y+ +LI GV A + +
Sbjct: 262 MDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLI----GVH-----ASYYY 312
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGG 307
SA + NG VY +G ++ + + +P ++ +L + G YH +T G
Sbjct: 313 SAALTSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQG 372
Query: 308 ELYTWGSNENGCLGIG 323
++++WG NG LG G
Sbjct: 373 QVFSWGRGINGQLGHG 388
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 140/330 (42%), Gaps = 61/330 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG DYG+LGLGS E+ S+ ++A G HT++LT T VY+ G N+FGQ
Sbjct: 4 WGKNDYGQLGLGS-ENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQ 62
Query: 103 -------------------------------LGISEN-----IGYSL------------E 114
+ I+E+ G SL E
Sbjct: 63 LGQQKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDSLHE 122
Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P + + VVQ++ G H A+T +G + WG N+ GQLGLG + + PT +
Sbjct: 123 PKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLE-PTIIAS 181
Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
L+ Q G S ++ G + +WG G+LGHG S + +PRL+K
Sbjct: 182 LNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSF--------QSSPRLVK 233
Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
L +V A G HS C NG V+ +G ++ + +P I +L +
Sbjct: 234 TLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELMGTTVC 293
Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
++ CG HT LT +L +G N N LG
Sbjct: 294 QICCGRRHTISLTDKRKLLGFGLNSNNQLG 323
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 107/237 (45%), Gaps = 22/237 (9%)
Query: 92 VYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
+Y G ND+GQLG+ SEN+ S P I + V+ I++G H+ +T ++Y G N
Sbjct: 1 MYGWGKNDYGQLGLGSENMLISC-PSPIDA-NQSVISIASGLRHTVYLTSTRKVYSCGSN 58
Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
GQLG K + P+ V A G S+A+ G + WG +G L
Sbjct: 59 EFGQLGQQKSQCR----PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELM 114
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
Q+S + P+L+ ++ V A G H + E G + +G ++
Sbjct: 115 CKQDSL----------HEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQL 164
Query: 271 -LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L P++I+ L P S+ + G YH+ VL+ G L+TWG N G LG G
Sbjct: 165 GLGSSEIEFLEPTIIASLNAFPISQ-ICAGAYHSGVLSPSGTLFTWGKNNWGQLGHG 220
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG ++G+LG G+ +S + P + + +A G H++ T G V++ G G
Sbjct: 209 WGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNG 268
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG ++ +P +I L V QI G H+ ++T +L +G NSN QLG
Sbjct: 269 QLG-HNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHND 327
Query: 161 AAKVIPIPTKV 171
+ +PI +
Sbjct: 328 TSARLPITIPI 338
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 138/286 (48%), Gaps = 21/286 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G D+G+LG G+ +S +P V + + +ACG HT+ TE+G +Y+ G GQ
Sbjct: 59 FGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQ 118
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + S P I GL ++ ++ G S+AIT +GELY WG GQ GLG+
Sbjct: 119 LGHGDAED-SHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDT 177
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
IPT++ + + + G+ VT G + G G+LG E L
Sbjct: 178 ----EIPTRLHLHGKV--RMVSCGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQ-----L 226
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNH 277
+TS+ + IK +E +V +AA G +A + +NG VY FG ++ E
Sbjct: 227 DNTSQL--QKIKSIED-QVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEF 283
Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R L K+ + V CG T V+T G LYT+G +G LG+G
Sbjct: 284 PERIPLFEKVK-ARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLG 328
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 126/253 (49%), Gaps = 22/253 (8%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
L+CG H+ +T G +Y G ND+GQLG Y+ +P + LK E V ++ G +H
Sbjct: 40 LSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYT-KPSVVKKLKPEKVYMVACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ A T G LY +G +GQLG G A+ +P +E L K A G + S A+T
Sbjct: 99 TIAATESGHLYSFGCGGDGQLGHGD--AEDSHVPKIIEGLDVQKYKHLACGSDFSAAITE 156
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G++ +WG+ G G+ G G+++ I L L G KV++ + G+ H A +
Sbjct: 157 NGELYTWGSCGEGQNGLGEDTEIPTRLH------------LHG-KVRMVSCGYYHMAVVT 203
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELY 310
E+G +Y+ G++ K+ S + K+ E+ V CG T V+T G +Y
Sbjct: 204 EDGSLYMCGEKEGGKLGLDH-EQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVY 262
Query: 311 TWGSNENGCLGIG 323
T+G G LG+G
Sbjct: 263 TFGQGNQGQLGLG 275
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
VV +S G HS+ +T +G+LY +G N GQLG G K P+ V+ L A
Sbjct: 37 VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGN--TKSYTKPSVVKKLKPEKVYMVAC 94
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G ++A T G + S+G GG G+LGHG + + P++I+ L+ K K A
Sbjct: 95 GRNHTIAATESGHLYSFGCGGDGQLGHGD---------AEDSHVPKIIEGLDVQKYKHLA 145
Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
G SA I ENG +Y +G + G P+ + V CG YH V+T
Sbjct: 146 CGSDFSAAITENGELYTWGSCGEGQNGL--GEDTEIPTRLHLHGKVRMVSCGYYHMAVVT 203
Query: 305 SGGELYTWGSNENGCLGI 322
G LY G E G LG+
Sbjct: 204 EDGSLYMCGEKEGGKLGL 221
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+ G+ GLG E P K ++ ++CG H +TE G +Y G + G+
Sbjct: 163 WGSCGEGQNGLG--EDTEIPTRLHLHGK--VRMVSCGYYHMAVVTEDGSLYMCGEKEGGK 218
Query: 103 LGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ E + + + +I ++ +VV + G ++ +T +G +Y +G+ + GQLGLG
Sbjct: 219 LGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSM 278
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P ++ + + + G + +T G + ++G G G+LG G E
Sbjct: 279 MET-EFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDEC------ 331
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLH 249
++ + P +K VK+ G H
Sbjct: 332 -FSNTFKPEKVKRFNNFTVKMVTCGGCH 358
>gi|405968936|gb|EKC33959.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
Length = 1493
Score = 106 bits (264), Expect = 2e-20, Method: Composition-based stats.
Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 9/278 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD G+LG G++ES+ +P + + S+ CG ++F ++ G V G G
Sbjct: 574 WGSGDKGQLGHGNMESKMKPELVQSLNGKSISRACCGEGFSIFASDNGIVLTCGDGTSGC 633
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
LG + + L + L +V+ IS G H + +GE+ WG ++G+LGLG +
Sbjct: 634 LGHGDTLSCYRPRLIETLLSLDVIAISCGSKHVVVVGSEGEVLTWGCGADGRLGLGTEDN 693
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P ++E + + G + ++ +T G V + G+ +LG + ++
Sbjct: 694 HCQPQELRIE--EPVVIRDVFCGVDGTMFLTDVGSVYACGSNSDNKLGLNNRQGFIMAMK 751
Query: 223 STSEYT-------PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
+ T P ++ L +V + G H+A I E G +Y FG + ++ +
Sbjct: 752 NIFTKTEVEGSNVPTPVRALARHRVLGISMGACHTAVIVEPGHIYTFGKNSEGQLGIGDT 811
Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
+R P + + S V CG ++T T+ ELY WG
Sbjct: 812 KPSRAPVEVKAMLESVRVQCGNHYTVCSTTSNELYYWG 849
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 14/218 (6%)
Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
E+ S+ P+ + K ++ + G H +T + ++Y WG GQLG G +K+
Sbjct: 535 ESCTASMTPIELPP-KIKIRHAAVGEDHVIVVTTEKQVYSWGSGDKGQLGHGNMESKM-- 591
Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
P V+ L+G +A G S+ + G VL+ G G SG LGHG + S
Sbjct: 592 KPELVQSLNGKSISRACCGEGFSIFASDNGIVLTCGDGTSGCLGHGD---------TLSC 642
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLIS 285
Y PRLI+ L + V + G H + G V +G A ++ L E NH + L
Sbjct: 643 YRPRLIETLLSLDVIAISCGSKHVVVVGSEGEVLTWGCGADGRLGLGTEDNHCQPQELRI 702
Query: 286 KLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
+ P +V CG T LT G +Y GSN + LG+
Sbjct: 703 EEPVVIRDVFCGVDGTMFLTDVGSVYACGSNSDNKLGL 740
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
T +E I + AA+G + + VT +V SWG+G G+LGHG S+
Sbjct: 542 TPIELPPKIKIRHAAVGEDHVIVVTTEKQVYSWGSGDKGQLGHGNME---------SKMK 592
Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
P L++ L G + A G S +NG V GD + + RP LI L
Sbjct: 593 PELVQSLNGKSISRACCGEGFSIFASDNGIVLTCGDGTSGCLGHGDTLSCYRPRLIETL- 651
Query: 289 YSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S +V+ CG H V+ S GE+ TWG +G LG+G
Sbjct: 652 LSLDVIAISCGSKHVVVVGSEGEVLTWGCGADGRLGLG 689
>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
Length = 1082
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 141/301 (46%), Gaps = 36/301 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G RP + +++ +ACG HT ++ +G ++ G ++
Sbjct: 291 WGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNA 350
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG + + + P R+SG + +V+ ++ G HS+ T +G+L+ +G + G LG G
Sbjct: 351 GLLGHGTEVSHWI-PKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHG 409
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
+ + +P P +V+ LSG+ T + A G + A+ K+ +WG G R
Sbjct: 410 DRES--VPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHR 467
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG + + L P + L A G + + +G V+ G A
Sbjct: 468 LGHGSKETYL---------LPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYG 518
Query: 269 KMLFQEGN---HARRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ GN R P L+ KL + EE+ CG YH VLTS E++TWG NG LG
Sbjct: 519 QL----GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGH 574
Query: 323 G 323
G
Sbjct: 575 G 575
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 97/224 (43%), Gaps = 44/224 (19%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V QI+ G H + +T GE++ WG+ S G+LG G P VE L+ A
Sbjct: 268 DVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHG--IDNDFSRPHLVEFLAVNNVDFVA 325
Query: 184 LGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKV 240
G + AV+ G + +WG G +G LGHG E S + P+ + LEG++V
Sbjct: 326 CGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTE---------VSHWIPKRVSGPLEGLQV 376
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE-------- 292
A G HSA NG+++ FGD F H R S +PY E
Sbjct: 377 LSVACGTWHSALATSNGKLFTFGDGT-----FGVLGHGDRES----VPYPREVQILSGLK 427
Query: 293 ---VVCGGYHTCVL----------TSGGELYTWGSNENGCLGIG 323
V CG +HT + S +L+TWG + LG G
Sbjct: 428 TIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHG 471
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG GS E+ P SA ++ LACG T+ LT +G V+ G +GQ
Sbjct: 460 WGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQ 519
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + G L L L E V +IS G +H + +T E++ WG+ +NG+LG G
Sbjct: 520 LGNPLSDGR-LPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTE 578
Query: 162 AKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
+ PT VE L K + G F S+ +
Sbjct: 579 DRR--SPTFVEALKDRNVKSISCGSNFTASICI 609
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 30/263 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
+ACG H +T G V+ G G+LG + +S L V ++ G +H+
Sbjct: 272 IACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHT 331
Query: 136 SAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAV 192
A++ G+L+ WG ++ G LG G + + IP +V L G+ A G S
Sbjct: 332 CAVSTSGDLFTWGDGTHNAGLLGHGTEVSHW--IPKRVSGPLEGLQVLSVACGTWHSALA 389
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T GK+ ++G G G LGHG S+ PR ++ L G+K A G H+A
Sbjct: 390 TSNGKLFTFGDGTFGVLGHGDRESVP---------YPREVQILSGLKTIKVACGVWHTAA 440
Query: 253 IDE----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCGGY 298
I E + +++ +GD DK G+ P+ +S L Y+ ++ CG
Sbjct: 441 IIEVMSQSGTNISSRKLFTWGDG--DKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHT 498
Query: 299 HTCVLTSGGELYTWGSNENGCLG 321
T LT+ G ++T G G LG
Sbjct: 499 MTVALTTSGHVFTMGGTAYGQLG 521
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 142 GELYMWGKN-SNGQLGLGKKAAKVIPIPTKVECLSG--------IFTKQAALGFEQSVAV 192
G++Y+WG+ +G L G V P P K++ L+ + Q A G V
Sbjct: 227 GDVYVWGEVWCDGVLPDGS----VSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALV 282
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V +WG GRLGHG ++ F R P L++ L V A G H+
Sbjct: 283 TRQGEVFTWGEESGGRLGHGIDND---FSR------PHLVEFLAVNNVDFVACGEYHTCA 333
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGG 307
+ +G ++ +GD + L G P +S +V+ CG +H+ + TS G
Sbjct: 334 VSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSNG 393
Query: 308 ELYTWGSNENGCLGIG 323
+L+T+G G LG G
Sbjct: 394 KLFTFGDGTFGVLGHG 409
>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 131/309 (42%), Gaps = 47/309 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G P + +++ +ACG HT +T +G +Y G +++
Sbjct: 314 WGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNY 373
Query: 101 GQLG--------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G LG I + +G +E +R+S IS G H++ +T G+L+ +G S
Sbjct: 374 GLLGHGSEVSHWIPQKVGGQMEGIRVS-------YISCGAWHTAVVTSAGQLFTFGDGSF 426
Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------------GGGK 197
G LG G P +VE L G+ T + A G + A K
Sbjct: 427 GALGHGDHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRK 484
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ +WG G GRLGHG L P + L ++ A G + + G
Sbjct: 485 LYTWGDGDKGRLGHGDNEPRL---------VPECVAALIEERICQVACGNDLTVALTTAG 535
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
RVY G A ++ N + P+ + + EEV CG YH VLTS E+YTWG
Sbjct: 536 RVYTMGSTAYGQLGSATAN-GKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGK 594
Query: 315 NENGCLGIG 323
NG LG G
Sbjct: 595 GLNGQLGHG 603
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 40/293 (13%)
Query: 55 SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENI 109
SL S+ ++ A E + +ACGG H + +T G +++ G G+L G+ ++
Sbjct: 271 SLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV 330
Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPI 167
+ +SG E+V + G +H+ A+T+ G+LY WG ++ G LG G + + IP
Sbjct: 331 SHPKIIDTLSGTNVELV--ACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQ 388
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
+ + GI + G + VT G++ ++G G G LGHG TS +
Sbjct: 389 KVGGQ-MEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGD--------HITSNF 439
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDE---------------NGRVYIFGDRAVDKMLF 272
PR ++ L G++ A G H+A E + ++Y +GD DK
Sbjct: 440 -PREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDG--DKGRL 496
Query: 273 QEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
G++ R P ++ L +V CG T LT+ G +YT GS G LG
Sbjct: 497 GHGDNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLG 549
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 47/289 (16%)
Query: 43 WGNG--DYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
WG+G +YG LG GS S W P V E + ++CG HT +T G ++ G
Sbjct: 366 WGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGS 425
Query: 100 FGQLG----ISENIGYSLEPLRISGLKKEVVQISTG-YHHSSAITVDGEL---------- 144
FG LG I+ N +E LR GL+ +++ G +H ++A+ EL
Sbjct: 426 FGALGHGDHITSNFPREVETLR--GLR--TTKVACGVWHTAAAVEAINELSDSGTSASPS 481
Query: 145 ----YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTGGGK 197
Y WG G+LG G +++P EC++ + + Q A G + +VA+T G+
Sbjct: 482 SRKLYTWGDGDKGRLGHGDNEPRLVP-----ECVAALIEERICQVACGNDLTVALTTAGR 536
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDEN 256
V + G+ G+LG + L P ++ E+ V+ A G H A +
Sbjct: 537 VYTMGSTAYGQLGSATANGKL----------PTCVEGEIANSFVEEVACGSYHVAVLTSK 586
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
VY +G ++ + NH P+++ L + V CG T V+
Sbjct: 587 NEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVI 635
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ----ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
++G ++ L+ L L+ VV I+ G H+ +T GE++ WG+ S G+LG
Sbjct: 264 NKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLG 323
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQE 214
G +A + P ++ LSG + A G + AVT G + +WG G G LGHG E
Sbjct: 324 HGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSE 381
Query: 215 SSILGFLRSTSEYTPRLI-KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
S + P+ + ++EG++V + G H+A + G+++ FGD + +
Sbjct: 382 ---------VSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHG 432
Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLT---------------SGGELYTWGSNE 316
+ + P + L + +V CG +HT S +LYTWG +
Sbjct: 433 DHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGD 492
Query: 317 NGCLGIG 323
G LG G
Sbjct: 493 KGRLGHG 499
>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
Length = 1152
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 137/303 (45%), Gaps = 43/303 (14%)
Query: 39 FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA----HTLFLTETGCVYA 94
F G G YGRLGLG ++ + + F+ L HTL LT G VY+
Sbjct: 415 FVHACGKGSYGRLGLGDSTNQTQLKRLN-FDNECLVKSVSSSKGSDGHTLALTLDGKVYS 473
Query: 95 TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNG 153
G D+G+LG + + L L +VV I+ GY HS+A+T DGELY WG+ G
Sbjct: 474 WGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYG 533
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHG 212
+LG G ++ +P+ K G Q A G +V V+ G+ V S+G+G +G+LGH
Sbjct: 534 RLGHGDNNSRNVPVQVKDVANVG----QVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHS 589
Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------- 263
+ + Y P++I+ L+G+ ++ G S + G+VY++G
Sbjct: 590 DTNRV---------YKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGS 640
Query: 264 ---DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
A K+L +H+ ++ G H LT +Y WG+N G
Sbjct: 641 VDATSATPKLLLALQSHSVV-----------DISVGDSHCVALTQDNNVYAWGNNSMGQC 689
Query: 321 GIG 323
G G
Sbjct: 690 GQG 692
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA--AKVIPIPTKVECLSGIFTKQAAL 184
QI G + + I DG ++ GK S G+LGLG ++ + ECL +
Sbjct: 399 QIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKG- 457
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA- 243
++A+T GKV SWG G G+LGHG S ++ P+L++ G KV
Sbjct: 458 SDGHTLALTLDGKVYSWGDGDYGKLGHG---------NSQTQKIPKLVEGALGNKVVCCI 508
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT-CV 302
AAG+ HSA + E+G +Y +G+ ++ + N P + + +V CG HT CV
Sbjct: 509 AAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQVKDVANVGQVACGSAHTVCV 568
Query: 303 LTSGGELYTWGSNENGCLG 321
G ++++GS +NG LG
Sbjct: 569 SQDGQTVWSFGSGDNGKLG 587
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 42 LWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+WG G LG GS++ + P + A + HS+ ++ G +H + LT+ VYA G N
Sbjct: 629 VWGCGP--SLGTGSVDATSATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSM 686
Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHS---SAITVDGELYMW 147
GQ G +P ++ GL V QIS G H+ +A+ +D ++ W
Sbjct: 687 GQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAWTALPMDRQVVSW 737
>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1114
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 136/306 (44%), Gaps = 45/306 (14%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
WG GRLG G + +P + + ++ +ACG HT +T G +Y G ++
Sbjct: 304 WGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNA 363
Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
G LG ++ + + P RISG + +V ++ G H++ +T G+L+ +G + G LG G
Sbjct: 364 GLLGHGNDVSHWI-PKRISGPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHG 422
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
+ + + P +VE LSG+ T AA G + AV GK+ +WG G
Sbjct: 423 DR--ENVAYPREVESLSGLRTIAAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKN 480
Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
RLGHG + L P + L A G + + +G V+ G
Sbjct: 481 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAMGS--- 528
Query: 268 DKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
+ Q GN P KLP EE+ CG YH VLTS E+YTWG N
Sbjct: 529 -TVYGQLGN----PYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 583
Query: 318 GCLGIG 323
G LG G
Sbjct: 584 GRLGHG 589
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GD RLG G E R +P A ++ +ACG + T+ LT +G V+A G +GQ
Sbjct: 474 WGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAMGSTVYGQ 533
Query: 103 LGISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG G L ++SG + V +I+ G +H + +T E+Y WGK +NG+LG G
Sbjct: 534 LGNPYADGKLPCLVEDKLSG--ESVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDI 591
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
+ PI VE L K A G + A+
Sbjct: 592 EDRKAPI--LVEALKDRHVKYIACGANYTAAI 621
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
+V I+ G H++ +T GE++ WG+ S G+LG G K + P VE L+ A
Sbjct: 281 DVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHG--VGKDVIQPRLVESLAVSTVDFVA 338
Query: 184 LGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKV 240
G + AVT G++ +WG G +G LGHG + S + P+ I LEG++V
Sbjct: 339 CGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGND---------VSHWIPKRISGPLEGLQV 389
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
G H+A + G+++ FGD + + + P + L + CG +
Sbjct: 390 ASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIAAACGVW 449
Query: 299 HTCVLTS-----------GGELYTWGSNENGCLGIG 323
HT + G+L+TWG + LG G
Sbjct: 450 HTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHG 485
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 142 GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVT 193
G++Y+WG+ ++ ++G K A V + +P +E + A G + VT
Sbjct: 237 GDVYIWGEVIYDNAVKIGADKNANYVSTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 296
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG GRLGHG ++ PRL++ L V A G H+ +
Sbjct: 297 RQGEVFTWGEESGGRLGHGVGKDVI---------QPRLVESLAVSTVDFVACGEFHTCAV 347
Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
G +Y +GD + L GN P IS P V CG +HT ++TS G
Sbjct: 348 TMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISG-PLEGLQVASVTCGPWHTALVTSTG 406
Query: 308 ELYTWGSNENGCLGIG 323
+L+T+G G LG G
Sbjct: 407 QLFTFGDGTFGVLGHG 422
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,428,769,448
Number of Sequences: 23463169
Number of extensions: 235501648
Number of successful extensions: 694370
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4417
Number of HSP's successfully gapped in prelim test: 1349
Number of HSP's that attempted gapping in prelim test: 580392
Number of HSP's gapped (non-prelim): 38087
length of query: 323
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 181
effective length of database: 9,027,425,369
effective search space: 1633963991789
effective search space used: 1633963991789
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)