BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020659
(323 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 140/285 (49%), Gaps = 16/285 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
WG G+ G+LG G E R P SA + H + ++ CG HT+ +++G VY+ G DFG
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG N PL I L + QI+ G H A+T++GE+ WG+N NGQLGLG
Sbjct: 99 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P K++ GI K A G E + AVT G + WG G G LG G
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
T P + G K+ + A G+ H+ + +G +Y +G ++ +
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P + L S ++ G HT LTS G+LY WG N+ G +G+G
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVG 311
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 19/286 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD+GRLG G+ + P+ A +K +ACG +H L +T G V + G N GQ
Sbjct: 92 WGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 151
Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG+ + SL P +I + + ++ G H++A+T DG+LY WG G LGLG +
Sbjct: 152 LGLGDTED-SLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRT 210
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
++ +P +V G A G+ +++V+ G + ++G G+LGHG L
Sbjct: 211 DRL--VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHL--- 265
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
P ++ L + + G+ H+ + +G++Y +G ++ GN+ +
Sbjct: 266 ------IPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV--GNNLDQC 317
Query: 282 SLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
S + + P ++VV CG HT +T ++ WG NG LGIG
Sbjct: 318 SPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIG 363
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 16/213 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G YG LGLG R P ++ + +ACG HT+ ++ +G +Y G + +GQ
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQ 255
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + + L P ++ L + QIS G+ H+ A+T DG+LY WG N GQ+G+G
Sbjct: 256 LGHGD-LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+ P+ + + Q + G+ ++AVT V +WG G +G+LG G+
Sbjct: 315 DQCSPVQVRFPDDQKVV--QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGE-------- 364
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
S P++I E + V A+ + S+ ID
Sbjct: 365 -SVDRNFPKII---EALSVDGASGQHIESSNID 393
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
++ ++V+ IS G HS A+ + WG+ +GQLG G A+ P PT++ L G
Sbjct: 9 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGD--AEDRPSPTQLSALDG 66
Query: 177 IFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
G + +VA + G +V SWG G GRLGHG S + +TP IK L
Sbjct: 67 HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKAL 117
Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEV 293
G+++K A G H + G V +G ++ + + P I + V
Sbjct: 118 HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMV 177
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT +T G+LY WG G LG+G
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 207
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 153/288 (53%), Gaps = 21/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
G G YGRLG G+ + V SA + + L +CG H++ LTE+G V++ G D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG N P +I L+ +EVVQ+S G+ HS+ +T DG+L+ +G G+LGLG
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
+ K +P +V L G Q A G ++AV+ G ++ ++G G G+LG G
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
ST++ +P+ I L G+ +K A G S + ++G VY FG DR + + NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
RP I L E+V G HT L S G++Y WGSN G LG+G
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG 4326
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 147/288 (51%), Gaps = 23/288 (7%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
G G YGRLGLG ++ + FE H S+K ++ HTL T G V++ G D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486
Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
+G+LG + L L+ K VV +S GY HS+A+T DGELY WG+ G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
++ IPT V+ +S + + + G ++A++ G+ V S+G G +G+LGHG + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
Y P++I+ L+G+ ++ AG S + G+VY +G A E
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
A RP LI +L + +V G H L+ E+Y WG+N G G G
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G+ + + RP A + + ++CG H+ +T G ++ G D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
LG+ L P R++ L+ ++ Q++ G +H+ A++ DG + + +G G+LGLG
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
AK P K++ L GI K+ A G + SVA+T G V ++G L G
Sbjct: 4225 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
R+ + P+ I L GV ++ A G H+ + NG VY +G + ++ NH R
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333
Query: 281 PSLISKL 287
P+L++ L
Sbjct: 4334 PTLVTGL 4340
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 120/244 (49%), Gaps = 18/244 (7%)
Query: 85 FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
++ET VY G N QL G E I L+P +++ + I G + + I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
+ GK S G+LGLG + E I ++ G + ++A T G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
G G G+LGHG ST +Y P+LI+ L+G V +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
+G+ ++ + N P+L+ + EV CG HT L+ G ++++G +NG
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593
Query: 320 LGIG 323
LG G
Sbjct: 594 LGHG 597
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+GDYG+LG G+ ++ P ++ + + ++ G H+ +TE G +Y G DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
+LG ++ ++ P + + V ++S G H+ A++ DG ++ +G NG+LG G
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P +E L G+F ++ G + S+A+T G+V +WG G LG G SS
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LR P+LI+EL ++ + G H + + VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G GD G+LG G ++P V A + ++ + G +L LT TG VYA G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643
Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG + +L P I L +V +S G H A++ D E+Y WG NS GQ G G
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
+ P KV L GI +Q + G S+A T +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
I+G+ ++++ +T + ++Y+WG +GQL +A + + +P S
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
+Q G + + G VL+ G G GRLG G + + +I L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078
Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
V + + G HS + E+G V+ +GD K+ + RRP I L EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137
Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ V+TS G+L+T+G+ + G LG+G
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLG 4169
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
WG GD+GRLG G SR P + ++ ++CG +HT+ L++ G V++ G D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592
Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG + +P I L+ + ++ G S A+T G++Y WG LG G
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A + P +E L+ ++G +A++ +V +WG G+ G G
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701
Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
ST T P+ + L+G+ ++ +AG HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G E
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG +
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S ++ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V QI+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN YG+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V ++ G H+ A+ G++Y WG +S+GQLGL +
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ + +P+LIK L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A+ACG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S +V CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G Q A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V Q++ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPIPTK 170
+ + P K
Sbjct: 333 SNRKSPFTVK 342
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 147/285 (51%), Gaps = 19/285 (6%)
Query: 43 WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
WGN +G+LGLG ++ P F ++ + CG HT+F+ + G VY G ND
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG ++ +P ++ L + +V +S G H+ A+ G++Y WG +S+GQLGL
Sbjct: 64 GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + I +P ++ LS I Q A G+ S+A++ +V WG G+LG G +
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ +P+L+K L G+ AAG HS + +G ++ +G ++ + N
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
P+L+ L S+++V CG HT LT G ++T+G+ G LG
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275
Score = 127 bits (320), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 139/284 (48%), Gaps = 16/284 (5%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G D G+LG +SR +P A + ++ A++CG AHTL L + G VYA GL+ GQL
Sbjct: 59 GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
G+ + P I L ++VQ++ GY+HS A++ E++ WG+N GQLGLG
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
K P ++ L GI Q A G S +T G + WG G+LG E+
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P L+K L K+ G H+A + + G V+ FG ++ +H P
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIG 323
+ +L S E+ CG HT + S G +Y++G NG LG G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG+ + + P + + +A GGAH+ LT +G ++ G N FG
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
QLG+++ + L S +++V I G H++A+T +G ++ +G GQLG +
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
++ P KV L G + A G + + A V G++ S+G GG+G+LG G S+
Sbjct: 281 HEI--NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 334
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQLGLG +++ P K + + G +V V G V + G
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH + S P + L+ + + G H+ +++ G+VY +G +
Sbjct: 64 GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L R P I L + +V CG YH+ L+ E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG +G+LGL R+ P + + + + CG HT LT+ G V+ G +GQ
Sbjct: 214 WGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273
Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG + + + P ++ L +V +I+ G H+SA + G +Y +G NGQLG G
Sbjct: 274 LG-HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGST 332
Query: 161 AAKVIPI-------PTKVECLSGIFTKQ 181
+ + P P +CL I +++
Sbjct: 333 SNRKSPFTVKGNWYPYNGQCLPDIDSEE 360
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats.
Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYATG N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 117
Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + + + + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL K
Sbjct: 118 QLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL--K 175
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ +P +V G + G+ S VT G++ +G +G+L G + +LG
Sbjct: 176 NVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKL--GLPNQLLGN 231
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
R TP+L+ E+ +++A G H+ + EN VY FG + LF+
Sbjct: 232 HR-----TPQLVSEIPEKVIQVACGG-EHTVVLTENA-VYTFGLGQFGQLGLGTFLFE-- 282
Query: 276 NHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P +I + + CG HT ++T G +YT+G +G LG+G
Sbjct: 283 --TSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLG 330
Score = 108 bits (269), Expect = 7e-23, Method: Composition-based stats.
Identities = 82/257 (31%), Positives = 126/257 (49%), Gaps = 28/257 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG H+ +T +Y G N++GQLG+ S +P + LK E V+++ G +H
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
+ T G +Y G N+ GQLGLG + VI T + KQ + G S
Sbjct: 99 TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+T G++ WG G++G S++ P+ + G V + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQVT--IGKPVSWISCGYYHS 202
Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
A + +G +Y+FG+ K+ GNH R P L+S++P +V CGG HT VLT
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261
Query: 307 GELYTWGSNENGCLGIG 323
+YT+G + G LG+G
Sbjct: 262 A-VYTFGLGQFGQLGLG 277
Score = 102 bits (253), Expect = 5e-21, Method: Composition-based stats.
Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 20/202 (9%)
Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
V +S G HS+ +T + +LYM+G N+ GQLGLG K+A I PT V+ L K AA G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
++ T GG V + G G+LG G ++ F TSE+ K+
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142
Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
K +AG SA + E+GR++++GD + ++ + ++ P ++ + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202
Query: 301 CVLTSGGELYTWGSNENGCLGI 322
+T+ GELY +G ENG LG+
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL 224
Score = 38.9 bits (89), Expect = 0.047, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + + + P +CS F + +K +ACGG H +
Sbjct: 319 FGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMV 362
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
++G V+ FG K F E N + K + CG H+ V+T +LY +GS
Sbjct: 10 DSGAVFTFG-----KSKFAENNPGK---FWFKNDVPVHLSCGDEHSAVVTGNNKLYMFGS 61
Query: 315 NENGCLGIG 323
N G LG+G
Sbjct: 62 NNWGQLGLG 70
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ +G+LG +S RP A + ++CG H++ + G V+A G GQL
Sbjct: 47 GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106
Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
+ IP KV+ L GI Q A G S A++ G WG+ SG+L ++ G
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
Y P I L+ + V + G+ H+A + E G+V+ FG + ++ + R P
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279
Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
LI + ++ C YHT V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306
Score = 104 bits (260), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 124/251 (49%), Gaps = 18/251 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
A G H+L L VY+ G N +GQLG + + P I L V +S G HS
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
A+ G+++ WG S GQLG+G+ ++ +PTK++ L+GI Q + G S+A++
Sbjct: 87 VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
G V SWG G+LG G+ S S+ P+ +K LEG+ + AAG HS +
Sbjct: 146 GHVFSWGRNSEGQLGLGK--------NSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197
Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
G + +G ++ GN + +P I L + CG HT VLT G++
Sbjct: 198 TGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256
Query: 310 YTWGSNENGCL 320
+T+G N +G L
Sbjct: 257 FTFGGNSSGQL 267
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HHS + + +Y G NS GQLG + + P P ++ L+ + +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E SVAV GKV +WGAG G+LG G+ I + P IK L G+K+
Sbjct: 81 CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
+ G HS + E+G V+ +G + ++ G ++R ++ K+ E +V GG
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
H+ L+ G + WGSN +G L +
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALS 215
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 43 WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LG+G E + P A + ++CG H+L L+E G V++ G N G
Sbjct: 98 WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
QLG+ +N P ++ L+ + Q++ G HS A+++ G + WG N +GQL L G
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + I P + L + + G+E + +T G+V ++G SG+L S G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
P+LI+ + G +I A + A + G+V G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
SGI QAA G S+ + +V S G G+LG R S P I+
Sbjct: 20 SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR---------RDQSTERPEPIQA 70
Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE 291
L + V + + G HS + G+V+ +G + ++ F+E + P+ I L +
Sbjct: 71 LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM--PTKIKALAGIK 128
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+V CG YH+ L+ G +++WG N G LG+G
Sbjct: 129 IIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLG 162
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
PR +K G+++ AA+G HS + N RVY GD + ++ + RP I L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + V CG H+ + G+++ WG+ G LGIG
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIG 109
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 122 bits (306), Expect = 3e-27, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 27/322 (8%)
Query: 10 TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
+K++ K DI + G I + + + ++G+ ++G+LGLGS + +P A +
Sbjct: 28 SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 70 KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
+K ACG HTL T+TG VYA G N+ GQLG+ + + + + Q+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
S G + S+A+T DG+L+MWG NS GQ+GL K+ IP V G + G+
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYH 201
Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
S VT G++ ++G +G+LG E + + +P+ + + +++A G
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNELLM-------NHRSPQRVLGIPERVIQVACGGG- 253
Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
H+ + E VY FG + LF+ P +I ++ + + CG HT
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308
Query: 302 VLTSGGELYTWGSNENGCLGIG 323
++T G LYT+G +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330
Score = 41.6 bits (96), Expect = 0.008, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG + +++ P +CS F + +++ +ACGG H L
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHML 362
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P VC S+K +ACGG H++FL E G VY GLN GQLG E G +P +I
Sbjct: 24 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80
Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L + ++ ++ G HS A++ G+L+ WG S+GQLGL V +P ++ L+
Sbjct: 81 LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
Q + G +A+ G+ +WG G+LG G+E S+ +P+ ++ LEG+
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
+ AAG HS + +G V+ +G ++ + P + KL +++VV CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250
Query: 297 GYHTCVLTSGGELYTWGSNENGCLG 321
HT VLT G ++T+G+ G LG
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLG 275
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 43 WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG G G+LGL + E S P + + ++ ++CG H L L G + G N G
Sbjct: 108 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 167
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + P R+ L+ + Q++ G HS A+++ G ++ WG N+ GQLGL +
Sbjct: 168 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P V+ L + G E + +T G V ++GAG G+LGH
Sbjct: 228 KDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS------- 278
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
E PR + EL G +V A G H+ A + +G +Y FG
Sbjct: 279 --MNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
GQ GIS N+ G EP ++ G + V +++ G +HS + DGE+Y G N+ GQLG
Sbjct: 9 LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
++ K P ++ L+ A G S+A++ G++ SWGAG G+LG
Sbjct: 68 HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117
Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
L +T + PRLI++L + + G H + +G+ + +G + ++
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173
Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
F +R + +P ++ V GG H+ L+ G ++ WG N G LG+
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGL 224
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ +G V+ G+N+ G
Sbjct: 161 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+S+ P + L+ ++VV IS G H++ +T G ++ +G S GQLG
Sbjct: 221 QLGLSDEKDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
+V P +V L G Q A G + ++A V G + ++G G G+LG G ++
Sbjct: 280 NDEVNP--RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
WG S GQ G+ ++ P +S K+ A G SV + G+V + G
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
G+LGH +E + P I L + A G HS + + G+++ +G +
Sbjct: 64 GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112
Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ L + P LI KL +V CG +H L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGL + R P + ++CG HT LT++G V+ G GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
LG +++ + P R+ L EV QI+ G H+ A + G +Y +G + GQLG G
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332
Query: 161 AAKVIPIPTK 170
P P K
Sbjct: 333 CNVKCPSPVK 342
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 119 bits (299), Expect = 2e-26, Method: Composition-based stats.
Identities = 88/290 (30%), Positives = 141/290 (48%), Gaps = 25/290 (8%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
++G+ ++G+LGLGS + +P A + +K ACG HTL TE G VYA G N+ G
Sbjct: 58 MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117
Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + S + ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+P V G + G+ S VT G++ ++G G+LG + +
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
+ P+ + + G V++A G H+ + E VY FG + LF+
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFLFE-- 282
Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
P I + + + CG HT ++T G +YT+G +G LG+G
Sbjct: 283 --TSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLG 330
Score = 95.5 bits (236), Expect = 4e-19, Method: Composition-based stats.
Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 30/258 (11%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
L+CG HT +T +Y G N++GQLG+ S +P + LK E V+ + G +H
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
+ T G++Y G N+ GQLGLG + L FT KQ + G S
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEER------STFHLISFFTSQRKIKQLSAGSNTS 152
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
A+T G++ WG G++G +++ P+ + G + + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQIGLENVTNVC---------VPQQVT--VGKPISWISCGYYH 201
Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYS-EEVVCGGYHTCVLTS 305
SA + G++Y FG+ K+ NH R P + +P +V CGG HT VLT
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260
Query: 306 GGELYTWGSNENGCLGIG 323
+YT+G + G LG+G
Sbjct: 261 KA-VYTFGLGQFGQLGLG 277
Score = 93.2 bits (230), Expect = 2e-18, Method: Composition-based stats.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 15/223 (6%)
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
FG+ +ENI P + +S G H++ +T + +LYM+G N+ GQLGLG
Sbjct: 17 FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K+ + PT V+ L K AA G ++ T GGKV + G G+LG G
Sbjct: 72 KS--TVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
F + + R IK+L +AG SA + E+G ++++GD + ++ + +
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181
Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P ++ + CG YH+ +T+ G+LYT+G E G LG+
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGL 224
Score = 62.4 bits (150), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
+ACGG HT+ LTE VY GL FGQLG+ + + P I +K + + I+ G +H
Sbjct: 248 VACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENH 306
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
++ IT G +Y +G +G+LGLG + + IPT
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPT 341
Score = 39.7 bits (91), Expect = 0.034, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 43 WGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTL 84
+G+G +G+LGLG S ++ P +CS F + ++ ++CGG HTL
Sbjct: 319 FGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTL 362
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+ G+LG + P A E + ++CG H+L + G V+A G GQL
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
GI E S P +I L +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
P +V L GI Q A G S A++ G WG+ +G+L ++ G
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220
Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
P + L+ + V + G H+A + ++G+V+ FGD ++ + R P
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280
Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
L+ ++ ++ CG YHT + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 77 ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
A G H+L L V + G N GQLG G EP I L+ +V +S G H
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S A+ G ++ WG S GQLG+G+ ++ P K+ L+ I Q + G S+A++
Sbjct: 87 SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
+V SWG G+LG G+E S+ +P+ ++ LEG+ + AAG HS +
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197
Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
G + +G + ++ N + +P + L + CG HT VLT G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257
Query: 310 YTWGSNENGCLG 321
+T+G N +G LG
Sbjct: 258 FTFGDNRSGQLG 269
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 37 RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
R FA WG G G+LG+G E + P + ++CG H+L L++ V++
Sbjct: 95 RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152
Query: 96 GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
G N GQLG+ + P R+ L+ + Q++ G HS A+++ G + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212
Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
L L + + +P+ P V L + + G + +T GKV ++G SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269
Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ G P+L++ ++G+ +I + A + G+V FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
E++Q ++G HS + + + G NS GQLG ++ A+ +P ++ L + +
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLG--RRGAQRGELPEPIQALETLIVDLVS 81
Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
G E S+AV G+V +WGAG G+LG G+ I +TP+ I L +K+
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133
Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
+ G HS + ++ +V+ +G + ++ F +R + +P ++ V GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAH 192
Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
+ L+ G + WGSN G L +
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALS 216
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 43 WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG +G+LGLG S+ P + E L +A GGAH+ L+ G + G N G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211
Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
QL +S N+ S +PL + LK VV IS G H++ +T DG+++ +G N +GQLG
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271
Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
K P VE + G+ ++ + V G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318
Score = 35.0 bits (79), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G ++ AA+G HS + N RV GD + ++ + P I L + V
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H+ + G ++ WG+ G LGIG
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIG 110
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P ++ K E C HT T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ + P ++ L
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 128/269 (47%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P A +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+V++++ G HHS A+ DGEL+ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L G+ V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 TPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 283 KERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G ++A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L G+ Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
+++ E E V ++IAA H SA + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG L P +I K+ V++I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
L P ++K V T + + +T + E++++G N + LG G + + +P K+E
Sbjct: 13 LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69
Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G K + G V +T G V +WG G +LG+G + + ++ T L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
IK++ V A G HS + +G ++ +G ++ + P ++ +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181
Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
VV CG + + GE+Y WG N NG LG+G
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLG 216
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LG+G ++S P + + +L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G A +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G S+AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G++Y +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVLTS-GGELYTWG 313
P ++ K E C HT S GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
Query: 59 RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
+W + E+ L AC G L+ T ++ G N G LG+ + I ++E
Sbjct: 30 KWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88
Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
P R+ L K++ +S G H T DGE++ WG N+ QLG G ++P
Sbjct: 89 PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
LS + A G S+ +T G+V +WG SG++G G + ++ PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198
Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
L+ V A G + S + + G VY++G ++ + P ++ L
Sbjct: 199 TGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ V CG HT VLT G++Y WG+N G LG G
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTG 292
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG + G++G GS ++ P V + + ++ACG ++ + +TG VY G N G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNG 235
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
QLG+ + G P R++ L+ VQ ++ GY H+ +T +G++Y WG NS GQLG G K
Sbjct: 236 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
+ + P P VE I A S A + GG V WG
Sbjct: 295 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLGS ++ P +A + ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P + K +++I+ + H S+A + G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFCCTDDVF 357
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4063 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4122
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ VV I+ +G + +T D ++ WG G+LG G
Sbjct: 4123 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4180
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4181 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4237
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4238 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHT 4313
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 732 SWGSNDQ 738
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N +L P + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 546
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3292
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139
Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G A G Q++ +T V SWG G G+LG G S P
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4232
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VYA G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3228 TWGKGDYFRLGHG 3240
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
SA T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV + G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTV 3064
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3125 LGEYGRLGHG 3134
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +VV++ G S A+T DG++Y WGK N +LG G
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4180
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4221 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4280
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4281 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4069
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4070 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4124
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G+ RP V + + +A GGAH+ +T G +Y G +G+
Sbjct: 4065 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4124
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG S++ L+P + L+ V+ I+ +G + +T D ++ WG G+LG G
Sbjct: 4125 LGHSDSED-QLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4182
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K++ L+G+ + G + SVA+T G V +WG G RLGHG + +
Sbjct: 4183 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4239
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
PR ++ L+G KV A G LH C E+G VY +GD ++ N +
Sbjct: 4240 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 280 RPSLISKL--PYSEEVVCGGYHT 300
RP L++ L V CG HT
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHT 4315
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD G+LG S + +P + A + ++ +ACG +H+ LT +G +Y GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P + L V+Q++ G + A+T +G ++ WG G+LG G
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ IP +E L+G Q G + S+A+T G V +WG G RLGHG + +
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
P++++ L G K+ A G LH + ++G+VY +GD Q+GN
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295
Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
R+P+L+ L + V CG H+ T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 21/247 (8%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
G H L L TG VY+ G D G+LG + + EP IS K VV I+ G +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
S+AIT +GELY WG+ + G+LG G + IP+ V L G+ A G Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G+V SWG G G+LG G S TP+LI++L+ + V G S
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ ++G+VY +G ++ H R P L+ L + +V G H LT E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732
Query: 311 TWGSNEN 317
+WGSN+
Sbjct: 733 SWGSNDQ 739
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 20/288 (6%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
G GRLGLG S + P +A + +K +A GG H LT G V++ G D
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + +P I LK K + I+ G HS+A+T GELY WG G+LG G
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
++ P KV L G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
S P+ I+ L G V G S + ++G V+ +G ++ H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245
Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P ++ L + V G H +T G++Y WG N++G G G
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG 3293
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 124/278 (44%), Gaps = 43/278 (15%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
P+ C + +AC L L+ G VY N L P + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491
Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
+ +V+I+ + HH A+ GE+Y WG G+LG G +P+ P + SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547
Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
KQA A G S A+T G++ +WG G GRLGHG S E P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595
Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
L+ L+G+KV A +G + + ENG+V+ +GD K+ + + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655
Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ +V CG + LT G++Y+WG +N LG G
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 121/274 (44%), Gaps = 19/274 (6%)
Query: 57 ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
ES P + + + +K +A GG H L L+ G VY+ G + G+LG N
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083
Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
P I L+ EVV ++ G HS+ +T G+LY WGK G+LG ++ P VE
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141
Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
L G + G Q++ +T V SWG G G+LG G S P
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192
Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
I L G+ V G S + ++G VY +G ++ +H RRP + L +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252
Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ G H T GE+YTWG N+ G LG G
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
WG GD GRLG G P V SAF KH + +ACG ++ +T G +Y G
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578
Query: 98 NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
++G+LG + ++ P+ ++GLK +V+ ++ +G + A+T +G+++ WG G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
LG G + P +E L + + G + S+A+T G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+ P+L++ L+G KV AAG H + E+ V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG P C A +L+ + GG TLF +T G +YATG
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016
Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
G+LGI S LE ++ +KK V +++G H A++ +GE+Y WG+ +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
G ++ P +E L GI A G S VT G + +WG G GRLGH
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129
Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
S + P+L++ L+G +V A +G + C+ ++ V+ +GD K+
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183
Query: 275 GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ + P I L +V CG + LT G +YTWG + LG G
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4234
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 19/253 (7%)
Query: 79 GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
GG+ +LF +T G VY+ G G+LG+ + G P +I+ L VV+ + +G H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
++A+TVDG+++ WG+ +G+LG + P +E L + A G S A+T
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
G++ +WG G GRLGHG +T++ P+++K L G +V A G +
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168
Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
+ + G V+ +GD K+ P I +L ++ CG + LT G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 311 TWGSNENGCLGIG 323
TWG + LG G
Sbjct: 3229 TWGKGDYFRLGHG 3241
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
S T+ ++++WG N QLG G K +K I +P+ E LS + Q A G + AVT
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
GKV S G +GRLG G S + R + + ++K KV + + G H+ +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3065
Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
+G+V+ +G+ K+ + +P LI L ++ CG H+ LTS GELYTWG
Sbjct: 3066 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3125
Query: 314 SNENGCLGIG 323
E G LG G
Sbjct: 3126 LGEYGRLGHG 3135
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
WG G+YGRLG GS E P++ + + + +ACG A TL +TE G V++ G D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635
Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + G P I L+ +V+++ G S A+T DG++Y WGK N +LG G
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ + + P +E L G A G +A+T +V SWG+
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 94/239 (39%), Gaps = 67/239 (28%)
Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
G +Y WG N GQLG G + AKV
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
+ PT +E + +F K+ A+ G + +A++ G+V SWG G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072
Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
LGHG S PR+I+ L G++V AAG HSAC+ G +Y +G
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
++ + +P L+ L ++ CG T LT +++WG + G LG G
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 4182
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG+GDYG+LG G + P + + + + CG ++ LT+ G VY+ G D +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689
Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
L G E++ Y P + GL+ K+V+ ++ G H A+T D E++ WG N Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
+ K P PT + L A G QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GDY RLG GS + RP + + A+A G H + TE G VY G ND GQ
Sbjct: 4223 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4282
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
LG P ++ L+ K+V +++ G H+ A
Sbjct: 4283 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 47/175 (26%)
Query: 194 GGGKVLSWGAGGSGRLGHGQESSI--------LGFLR----------------------- 222
G G + WG G+LG + + + L LR
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011
Query: 223 ------------STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVD 268
+ S TP L++ ++ V +K A +G H + G VY +G+
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 4071
Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
K+ + RP +I L E +V GG H+ +T+ G+LYTWG G LG
Sbjct: 4072 KLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4126
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
G LGLG ++S P + + L+ G G H + T G V+ G N + QLG +
Sbjct: 76 GCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134
Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ L P IS K+V++++ G +HS +T DGE++ WG N++GQ+G G +
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQ-- 192
Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
PIP +V CL A G +AV G+V WG G+G+LG G S
Sbjct: 193 PIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLG---------NSG 243
Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
++ TP + L+G++V+ A G+ H+ + + G+VY +G + ++ GN + +
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301
Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
P + K E C HT T GG +Y WG
Sbjct: 302 PVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 27/295 (9%)
Query: 45 NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
+GD G+ +L S +W + E+ L AC G L+ T ++
Sbjct: 9 SGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68
Query: 94 ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
G N G LG+ + + ++EP R+ L K++ +S G H T +GE++ WG N+
Sbjct: 69 VLGTNCCGCLGLGD-VQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNA 127
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
QLG G ++P LS + A G S+ +T G+V +WG SG++G
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186
Query: 212 GQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
G + ++ PR + L+ V A G + + + G VY++G ++
Sbjct: 187 GS---------TVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ L + V CG HT VLT G++Y WG+N G LG G
Sbjct: 238 GLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
+WG G+LGLG+ ++ P +A + ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287
Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
QLG S P ++ K +++I+ + H S+A T G +YMWG+ GQ
Sbjct: 288 QLGTGNKSNQSY-PTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340
Query: 160 KAAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ + +P + A ++ +ACG +H+ ++ G +Y GL ++G+
Sbjct: 3097 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3156
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
LG +N L+P ++ L + VVQ++ G + A+T DG ++ WG G+LG G
Sbjct: 3157 LGHGDNT-TQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3215
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
P ++E LSGI Q G + S+A+T G+V +WG G RLGHG + +
Sbjct: 3216 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3271
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
P+ I L G +V A G LH + + G+VY +GD D GN
Sbjct: 3272 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3322
Query: 278 ARRPSLISKLP--YSEEVVCGGYHT 300
++P+L+ L + V CG H+
Sbjct: 3323 NKKPALVIGLDAVFVNRVACGSSHS 3347
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 129/287 (44%), Gaps = 19/287 (6%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
G G GRLGLG + P ++ +K +A GG H L LT G V++ G + G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
+LG +P + L+ K++ ++ G HS+AI+ GELY WG G+LG G
Sbjct: 3104 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3162
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
++ P V L+G Q A G Q++A+T G V SWG G G+LG G
Sbjct: 3163 TTQLKP--KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3215
Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
S TP I+ L G+ V G S + G V+ +G ++ H
Sbjct: 3216 ----SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3271
Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R+P I L V G H +T G++Y WG N++G G G
Sbjct: 3272 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+ G+LG G+ S RP + S+ +ACG AH+ +T +G V G +G+
Sbjct: 4160 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
LG ++ L P + L + + +G + IT D ++ WG G+LG G
Sbjct: 4220 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4277
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ +P K+E L+G+ + G + SVA+T G V +WG G RLGHG +
Sbjct: 4278 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4334
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
P+ + L+G K+ A G LH ++G VY +GD ++ +
Sbjct: 4335 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4387
Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTS 305
RP L++ L + +V CG HT L++
Sbjct: 4388 RPRLVAALQGKHIVKVTCGSAHTLALST 4415
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 144/297 (48%), Gaps = 37/297 (12%)
Query: 43 WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
WG+ G+LG G SR + P C A LA GG +LF +T G ++ATG
Sbjct: 4054 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4111
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
G+LG+ + +++ P + L+ V+ +++G H A+T +GE+Y WG+ +G+LG
Sbjct: 4112 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G + + P VE L+G+ A G S A+T G VL+WG G GRLGHG
Sbjct: 4171 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4224
Query: 218 LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
S + P+L++ L G + + IA +G + CI ++ V+ +GD K+
Sbjct: 4225 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4274
Query: 276 NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
R S KLPY E V CG + LT G +YTWG + LG G
Sbjct: 4275 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG 4329
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 75 ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
A+ GG H L LT G VYA G + G+LG + Y L ++G+ V I+ G
Sbjct: 4140 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4197
Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
HS+AIT G + WGK G+LG G ++ P VE L G A G Q++
Sbjct: 4198 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4255
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
+T V SWG G G+LG G S P I+ L G+ V G S
Sbjct: 4256 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 4306
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
+ ++G VY +G ++ +H RRP ++ L + + G H + GE
Sbjct: 4307 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4366
Query: 309 LYTWGSNENGCLGIG 323
+YTWG N+ G LG G
Sbjct: 4367 VYTWGDNDEGQLGDG 4381
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 128/254 (50%), Gaps = 22/254 (8%)
Query: 79 GGAHTLFL-TETGCVYATGLNDFGQLG--ISENIG--YSLEPLRISGLKKEVVQISTGYH 133
GG+ +LF+ ++ G VYA G G+LG ++ N+ + L LR +KK V + +G
Sbjct: 3026 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKK--VAVHSGGK 3083
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
H+ A+T+DG+++ WG+ +G+LG G + + P VE L + A G S A++
Sbjct: 3084 HALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAIS 3141
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSA 251
G++ +WG G GRLGHG +T++ P+L+ L G +V A G +
Sbjct: 3142 SQGELYTWGLGEYGRLGHGD---------NTTQLKPKLVTALAGRRVVQVACGSRDAQTL 3192
Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
+ E+G V+ +GD K+ + P I +L ++ CG + LT GE+
Sbjct: 3193 ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEV 3252
Query: 310 YTWGSNENGCLGIG 323
+TWG + LG G
Sbjct: 3253 WTWGKGDYYRLGHG 3266
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 117/271 (43%), Gaps = 34/271 (12%)
Query: 57 ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
ES P + F+ +K +AC L L++ G +Y L EPL
Sbjct: 561 ESAGVPTLSCRFQ---IKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPL 606
Query: 117 RISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
+ + +V IS H H AI + Y WG + +LG G A+ +P TK+
Sbjct: 607 PMEEVAHDVF-ISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP--TKIA 663
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L + G S A+T GG +L+WG G RLGHG S P L+
Sbjct: 664 ALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGN---------SDDRSLPTLV 714
Query: 233 KEL-EGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
L + + V +A +G HS + G V+ +GD K+ N + +P L+ LP
Sbjct: 715 VALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRV 774
Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ V G + L+S G+LYTWG + CLG
Sbjct: 775 QRVFAGSQFSVALSSEGQLYTWG--KATCLG 803
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
WG G Y RLG G+ + R P + A H + AL G AH+L LT G V+A G D+
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751
Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
G+LG + N SL+P+ + L + V ++ G S A++ +G+LY WGK + L ++
Sbjct: 752 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 809
Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
+ + +P V L A+ +A++ G+V WG S ++ SS
Sbjct: 810 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 865
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 21/247 (8%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
C G H L + Y+ G + +LG + ++ P +I+ L++ VQ + G +S+
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 681
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
AIT G L WG+ + +LG G + +P T V LS ALG S+A+T
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLP--TLVVALSDHMVVDVALGSGDAHSLALTS 739
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
G V +WG G G+LG+G + L P L++ L V+ A + F S +
Sbjct: 740 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLPRVQRVFAGSQF--SVALS 788
Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
G++Y +G +++ + P L+S L + +V H L+S GE++
Sbjct: 789 SEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 848
Query: 311 TWGSNEN 317
WG N++
Sbjct: 849 GWGRNDS 855
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 128 ISTGYHHSSAIT---VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ST + ++A + + +WG N QLG G K +KV +PT + +S + A
Sbjct: 2969 VSTSHEEAAAAPEQDLPCTVMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAG 3026
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G + V+ GKV + G G +GRLG G ++ P + L VK A
Sbjct: 3027 GSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNV---------PLPHQLPVLRQYVVKKVA 3077
Query: 245 --AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
+G H+ + +G+V+ +G+ K+ +P L+ L + +V CG H+
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 301 CVLTSGGELYTWGSNENGCLGIG 323
++S GELYTWG E G LG G
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHG 3160
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 89/238 (37%), Gaps = 69/238 (28%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG------------------ 185
+Y WG N GQLG G + ++ I PT E LS + Q A G
Sbjct: 4051 IYGWGHNHRGQLG-GLEGSR-IKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108
Query: 186 --------------------------FEQSVAVTGGGK----------VLSWGAGGSGRL 209
F + VAV GGK V +WG G G+L
Sbjct: 4109 GSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKL 4168
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
GHG S P+L++ L G+ V A G HSA I +G V +G +
Sbjct: 4169 GHGNRMSY---------DRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219
Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIG 323
+ + RP L+ L + ++ CG T +T +++WG + G LG G
Sbjct: 4220 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG 4277
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 29/193 (15%)
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA-LGFEQSVAVTGGG 196
++ +G+LY W L K A+ +P+ E +F A +A+
Sbjct: 587 LSQEGKLYTWR--------LAKPEAEPLPME---EVAHDVFISIAGHCEGRHFLAIDSNH 635
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
SWG G RLGHG + + P I LE V+ G +SA I
Sbjct: 636 NAYSWGTGEDHRLGHGD---------THARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 686
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC------GGYHTCVLTSGGELY 310
G + +G ++ + P+L+ L S+ +V G H+ LTS G ++
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVAL--SDHMVVDVALGSGDAHSLALTSEGLVF 744
Query: 311 TWGSNENGCLGIG 323
WG + G LG G
Sbjct: 745 AWGDGDYGKLGNG 757
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 51 LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
LG G +S P +K+L+ G G H L TE G VYA G N + QLG + N
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
G + + + L K+VV+++ G HHS A+ DGE++ WG N+ GQ+G G A + P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171
Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
KV CL A G S+AV G+V WG G+G+LG G + L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222
Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--LIS 285
TP + L V V G+ H+ + + G +Y +G ++ N+ P+ ++
Sbjct: 223 TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE 282
Query: 286 KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
K E C HT T GG +Y WG
Sbjct: 283 KERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG+ Y +LG G+ PV VC+ + +ACG H++ L G V+A G N+ G
Sbjct: 99 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
Q+G S + P +++ K VV I+ G S A+ +GE+Y WG N NGQLGLG
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
++ P+ +V L + Q G+ ++A+T G + +WGA G+LG G ++++L
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
++ E E V V+IAA H SA + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+LGLG+ ++ PV +A + + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
LG + N L P I K+ VV+I+ + H S+A T G +YMWG+ GQ
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316
Query: 161 AAKVIPIPTKVECLSGIF 178
+ ++P T C +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 28/250 (11%)
Query: 79 GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSS 136
G H L L+ G + E YS++ LR + +K+++QI+ G +HS
Sbjct: 105 GAEHMLILSSDGKPF-------------EYDNYSMKHLRFESILQEKKIIQITCGDYHSL 151
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A++ GEL+ WG+N +GQLG+G+K P VE L+G+ Q + G S+A++ G
Sbjct: 152 ALSKGGELFAWGQNLHGQLGVGRKFPSTT-TPQIVEHLAGVPLAQISAGEAHSMALSMSG 210
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
+ SWG G+LG G + S+ P LI+ L+ KV+ A G HSA + ++
Sbjct: 211 NIYSWGKNECGQLGLGH---------TESKDDPSLIEGLDNQKVEFVACGGSHSALLTQD 261
Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSG-GELYTWG 313
G ++ FG ++ + RP L+++L ++ CG +HT S G+++++G
Sbjct: 262 GLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFG 321
Query: 314 SNENGCLGIG 323
S ++G LG G
Sbjct: 322 SGKDGQLGNG 331
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 19/264 (7%)
Query: 66 SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KE 124
S ++ + + CG H+L L++ G ++A G N GQLG+ + P + L
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ QIS G HS A+++ G +Y WGKN GQLGLG +K P+ +E L + A
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK--DDPSLIEGLDNQKVEFVAC 250
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
G S +T G + ++GAG G+LGH + +E P L+ EL G +V A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNS---------TQNELRPCLVAELVGYRVTQIA 301
Query: 245 AGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT--- 300
G H+ A + + G+V+ FG D L G + L K+ SEE+ + +
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGS-GKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKE 360
Query: 301 CVLTSGGE--LYTWGSNENGCLGI 322
++ +GG + W EN + +
Sbjct: 361 LIMIAGGNQSILLWIKKENSYVNL 384
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 3/131 (2%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LGLG ES+ P + + ++ +ACGG+H+ LT+ G ++ G GQ
Sbjct: 215 WGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 274
Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
LG + L P ++ L V QI+ G H+ A D G+++ +G +GQLG G
Sbjct: 275 LG-HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGT 333
Query: 161 AAKVIPIPTKV 171
+++P+P KV
Sbjct: 334 RDQLMPLPVKV 344
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 135/291 (46%), Gaps = 24/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E + P S F + +K++ GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG +G++ E LR + K + Q++ G+ + +T G++ G N+ GQLG+
Sbjct: 80 QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
K + +P +ECL AA G ++A T G V WG G SG RL GQ
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ FL + P + LE A AG HSA + + G +Y++G R L
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASR 247
Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG 321
P I + +E V G H T G+++TWG + G LG
Sbjct: 248 AVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 130/300 (43%), Gaps = 36/300 (12%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LGLG E R +C ++ +ACG T+ LTE G V + G N FGQLG+
Sbjct: 79 GQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHG 138
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK---NSNGQLGLGKKAAKVI 165
+ P I L+++VV ++ G H+ A T G ++ WG +S +L G+ +
Sbjct: 139 PRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFL 198
Query: 166 PI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
P++V L A G + S ++T G++ W GR HGQ +S FL
Sbjct: 199 TAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVW-----GRNKHGQLASRAVFLP- 252
Query: 224 TSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFG----------------DR 265
P+ I+ + KV +G+ H E G+V+ +G +
Sbjct: 253 ----LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQK 308
Query: 266 AV--DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V D L +G PS + L + E+ CG H + + +WG NE+G G G
Sbjct: 309 PVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIR-DKCCSWGWNEHGMCGDG 367
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 119/242 (49%), Gaps = 27/242 (11%)
Query: 92 VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
++A G N +GQLG+ L P ++S + + ++ G HS+ +T G+L++ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N +GQLGLG +V+ T + L G +Q A G++ ++ +T G+VLS G+ G+L
Sbjct: 76 NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
G HG ++ P+ I+ L KV AAG H+ G V+ +G
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182
Query: 266 AVDKMLFQEGN-----HARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG 318
+ + L N A+ PS ++ L S V V G H+ LT GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242
Query: 319 CL 320
L
Sbjct: 243 QL 244
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 76/184 (41%), Gaps = 16/184 (8%)
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
S ++ L+ WG NS GQLGLG K +P C +G K G S VT
Sbjct: 8 SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
GG + G G+LG G +L F + K L G ++ A G+ + +
Sbjct: 67 GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117
Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
E G+V G A ++ G P I L E+VVC G H T+ G ++
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTATGSVF 175
Query: 311 TWGS 314
WG+
Sbjct: 176 QWGT 179
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 33/205 (16%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P + E + G H+ LT+TG +Y G N GQL S + L P RI
Sbjct: 202 EPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA-SRAVFLPL-PQRIEA 259
Query: 121 ---LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---GKKAAKVIP-------- 166
++V + +G+ H A T G+++ WG+ GQLG +A K +
Sbjct: 260 HYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQ 319
Query: 167 -----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P+ + CL+G + + G E ++AV K SWG G G G ES++
Sbjct: 320 GPQNSVPSPLHCLTG--ATEISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNV---- 372
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAG 246
+TP ++ L ++ G
Sbjct: 373 -----WTPTPVQALPPSPSRLLLVG 392
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 42 LWGNGDYGRLG----LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG +G+L L R + F+ + A+ G H + TETG V+ G
Sbjct: 235 VWGRNKHGQLASRAVFLPLPQR---IEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGR 291
Query: 98 NDFGQLGISENIGYSLEP------LRISGLKKEV----------VQISTGYHHSSAITVD 141
D+GQLG + +P L G + V +IS G H+ A+ D
Sbjct: 292 ADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRD 351
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+ WG N +G G G ++ P P +
Sbjct: 352 -KCCSWGWNEHGMCGDGTESNVWTPTPVQA 380
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 139/288 (48%), Gaps = 19/288 (6%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + +++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 108 NIGYS-LEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 463 VAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYY- 521
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P KV+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 522 -TPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 581 EVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGV--GNYKK 636
Query: 280 R--PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
R +L+ ++V+ CG T T ++ WG+ NG L +
Sbjct: 637 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 684
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 103 LGISENI-------GYSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 564 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 624 NKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Query: 210 G 210
Sbjct: 683 A 683
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 26/239 (10%)
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + Y +P + L+ K + Q+S G + +T +G+LY +G + G +G+ K
Sbjct: 404 GQLGHGDKASYR-QPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
A + P ++ +Q + G V +T +V SWG G GRLG E
Sbjct: 463 VAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY-- 520
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--------- 270
YTP+ + + + + G + + ++G+V G +K+
Sbjct: 521 -------YTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGI 573
Query: 271 ----LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ E + +L +L + + + G HT + G L T+G N+ G LG+G
Sbjct: 574 INHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 632
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK------HSLKALACGGAHTLFLTE 88
WGNG GRL + E +C+++ + H + L+C G HT+ + E
Sbjct: 674 WGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSCRGWHTILIVE 725
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 127/270 (47%), Gaps = 41/270 (15%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKEVVQISTG 131
++CG AH+L LT+ V++ G N +GQ G + EN YS R+ +VVQ++ G
Sbjct: 179 VSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACG 238
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
HS +T GE+Y G ++GQ GLG + PTK+ L+G+ Q A + +
Sbjct: 239 QDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSSPTKLGGDLAGVNVIQVATYGDCCL 296
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLH 249
AV+ G + WG + + + ST PR + GV KV+ AA G
Sbjct: 297 AVSADGGLFGWG--------NSEYLQLASVTDSTQVNVPRCL-HFSGVGKVRQAACGGTG 347
Query: 250 SACIDENGRVYIFG-----------DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---- 294
A ++ G V+++G + AV +M+ P+L ++ E+
Sbjct: 348 CAVLNGEGHVFVWGYGILGKGPNLVESAVPEMI--------PPTLFGLTEFNPEIQVSRI 399
Query: 295 -CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
CG H LT+ GEL+ WG N GCLGIG
Sbjct: 400 RCGLSHFAALTNKGELFVWGKNIRGCLGIG 429
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F ++ ACGG L G V+ G +G
Sbjct: 307 WGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWG---YG 363
Query: 102 QLGISENIGYSLEPLRIS----GLKK-----EVVQISTGYHHSSAITVDGELYMWGKNSN 152
LG N+ S P I GL + +V +I G H +A+T GEL++WGKN
Sbjct: 364 ILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIR 423
Query: 153 GQLGLGKKAAKVIP 166
G LG+G+ + P
Sbjct: 424 GCLGIGRLEDQYFP 437
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 134/284 (47%), Gaps = 11/284 (3%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + S++ ++CG T+ +T+ G +Y+ G + +G LG+++
Sbjct: 385 HGQLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQ 444
Query: 108 NIGYS-LEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
+ G LEPL + L + V Q+S G H A+T +Y WG G+LGL + +
Sbjct: 445 SAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDD--V 502
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL----GFL 221
P KVE G+ G + S +T GKVL+ G +LG Q ++ + F
Sbjct: 503 YSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQ 562
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ L K+L K++ + G H+A IDE GR+ FG ++ +
Sbjct: 563 EVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGI 622
Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
+L+ ++V+ CG T T+ ++ WG+ NG L +
Sbjct: 623 NLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAM 666
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S + + P + + CG + LT TG V A GLN+ +
Sbjct: 486 WGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNK 545
Query: 103 LGISE-------NIGYSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + + P S L K+ + IS G H++AI G L +G
Sbjct: 546 LGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGS 605
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E + A T + +WG GG+GRL
Sbjct: 606 NKCGQLGVGD-YRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRL 664
Query: 210 G 210
Sbjct: 665 A 665
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 121/303 (39%), Gaps = 42/303 (13%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA-----TG 96
+WG G L + WR + + G AH +T +Y G
Sbjct: 333 VWGGGKTTPQKLDVFKGGWRA-----------RQVCAGDAHFAVVTVEKELYTWVNMQGG 381
Query: 97 LNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
GQLG + Y +P + L+ K V ++S G + IT +G+LY +G + G L
Sbjct: 382 SKLHGQLGHGDRASYR-QPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCL 440
Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
G+ + A + P V+ Q + G +A+T V SWG G GRLG E
Sbjct: 441 GVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSED 500
Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----- 270
+ Y+P+ ++ G+ + G S + G+V G +K+
Sbjct: 501 DV---------YSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQY 551
Query: 271 --------LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
FQE + +L +L + + + G HT + G L T+GSN+ G L
Sbjct: 552 TAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQL 611
Query: 321 GIG 323
G+G
Sbjct: 612 GVG 614
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK------HSLKALACGGAHTLFLTE 88
WGNG GRL + E +C+++ + H + L+C G HT+ + E
Sbjct: 656 WGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSCRGWHTILIVE 707
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 19/288 (6%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
+G+LG G S +P + ++ ++CG T+ +T+ G +YA G + +G +G+ +
Sbjct: 403 HGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 108 NIGYS-LEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
G LEP++++ L V Q+S G +H +T + E+Y WG G+LGL +
Sbjct: 463 VSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYY- 521
Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF---- 220
P +V+ + G + + +T GKVL+ G +LG Q S I+
Sbjct: 522 -TPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYH 580
Query: 221 -LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
+ T+ +T L K+L K++ A G H+A IDE GR+ FG ++ GN+ +
Sbjct: 581 EVPYTTSFT--LAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGV--GNYKK 636
Query: 280 R--PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
R +L+ ++V+ CG T T ++ WG+ NG L +
Sbjct: 637 RLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM 684
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G+YGRLGL S E + P + + A+ CG T LT++G V A GLN+F +
Sbjct: 504 WGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNK 563
Query: 103 LGISENI-------GYSLEPLRIS-GLKKE-----VVQISTGYHHSSAITVDGELYMWGK 149
LG+++ + Y P S L K+ + I+ G H++AI G L +G
Sbjct: 564 LGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGC 623
Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
N GQLG+G K + I L G + + G E ++A T + +WG GG+GRL
Sbjct: 624 NKCGQLGVG-NYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 682
Query: 210 G 210
Sbjct: 683 A 683
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 26/239 (10%)
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
GQLG + Y +P + L+ K + Q+S G + +T +G+LY +G + G +G+ K
Sbjct: 404 GQLGHGDKASYR-QPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDK 462
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
+ + P ++ +Q + G V +T +V SWG G GRLG E
Sbjct: 463 VSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDY-- 520
Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--------- 270
YTP+ + + + + G + + ++G+V G +K+
Sbjct: 521 -------YTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGI 573
Query: 271 ----LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ E + +L +L + + + G HT + G L T+G N+ G LG+G
Sbjct: 574 INHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVG 632
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEK------HSLKALACGGAHTLFLTE 88
WGNG GRL + E +C+++ + H + L+C G HT+ + E
Sbjct: 674 WGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSCRGWHTILIVE 725
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 130/282 (46%), Gaps = 25/282 (8%)
Query: 56 LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYS- 112
LE P+ ++ + ++CG AH+L LT+ V++ G N GQ G + E+ YS
Sbjct: 156 LEPSPVPLPLDRPQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSE 215
Query: 113 -LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
+ R+ +VVQ+ G HS +T GE+Y G ++GQ GLG + P+K+
Sbjct: 216 SHKVHRMQDFDGQVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHY--NITSTPSKL 273
Query: 172 E-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
L+G+ Q A + +A++ G V WG + + + ST PR
Sbjct: 274 GGDLAGVTVVQVATYGDCCLALSADGGVFGWG--------NSEYLQLASVTDSTQVNVPR 325
Query: 231 LIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAV---DKMLFQEGNHARRPSLISK 286
+ GV KVK A G A ++ G V+++G + K+L P+L
Sbjct: 326 CLP-FSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAIPEMIPPTLFGL 384
Query: 287 LPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ EV CG H LT+ GEL+ WG N GCLGIG
Sbjct: 385 TEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIG 426
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGN +Y +L + ++ C F +K +ACGG L G V+ G G
Sbjct: 304 WGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILG 363
Query: 102 ------QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
+ I E I +L L + +V QI G H +A+T GEL++WGKN G L
Sbjct: 364 KGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCL 423
Query: 156 GLGKKAAKVIP 166
G+G+ + P
Sbjct: 424 GIGRLEDQYFP 434
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 131/291 (45%), Gaps = 24/291 (8%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFG 101
WG YG+LGLG E S F K +K + GG H+ +T+ G ++ GLN G
Sbjct: 20 WGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLNKDG 79
Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
QLG +G++ E L + K + Q++ G+ + +T +G++ G NS GQLG+
Sbjct: 80 QLG----LGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGV 135
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
+ + IP +E L AA G ++A T G V WG G SG RL GQ
Sbjct: 136 PHGPRRCV-IPQAIELLREKVVSIAA-GLRHALAATASGTVFQWGTGLASSGRRLCPGQT 193
Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
+ FL + P + LE + AG HSA + + G +Y++G ++ Q
Sbjct: 194 LPL--FLTAKE---PSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQA 248
Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG 321
P I + E + G H T G+++TWG + G LG
Sbjct: 249 A-FLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLG 298
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 131/300 (43%), Gaps = 36/300 (12%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LGLG E C + +++ +ACG T+ LTE G V + G N FGQLG+
Sbjct: 79 GQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHG 138
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN--SNGQLGLGKKAAKVIP 166
+ P I L+++VV I+ G H+ A T G ++ WG S+G+ + +
Sbjct: 139 PRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFL 198
Query: 167 IPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+ ++G+ QA G + S ++T G++ WG+ HGQ +S FL
Sbjct: 199 TAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSN-----KHGQLASQAAFL-- 251
Query: 224 TSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGD-------RAV------- 267
P+ I+ KIAA +G+ H G+V+ +G R V
Sbjct: 252 ---LLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWE 308
Query: 268 ----DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
D L G PS + L + E+ CG H + GG ++WG NE+G G G
Sbjct: 309 SEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVI-GGVCHSWGWNEHGMCGDG 367
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 127/267 (47%), Gaps = 41/267 (15%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKE-- 124
E HS +A+ A ++A G N +GQLG+ E++ L ++S K
Sbjct: 4 EPHSSEAVPTAAA----------LFAWGANSYGQLGLGHKEDV---LSAQQLSDFCKSGC 50
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
+ +I+ G HS+ +T +G L++ G N +GQLGLG + P K L G +Q A
Sbjct: 51 IKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKS--LLGCAIQQVAC 108
Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
G++ ++ +T G+VLS G+ G+LG HG ++ P+ I EL KV
Sbjct: 109 GWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVI----------PQAI-ELLREKVVS 157
Query: 243 AAAGFLHSACIDENGRVYIFGD-------RAVDKMLFQEGNHARRPSLISKLPYSEE--V 293
AAG H+ +G V+ +G R A+ PS ++ L S+ V
Sbjct: 158 IAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCV 217
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCL 320
+ G H+ LT GELY WGSN++G L
Sbjct: 218 LAGSDHSASLTDAGELYVWGSNKHGQL 244
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P + E + G H+ LT+ G +Y G N GQL + + L P RI
Sbjct: 202 EPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQL--ASQAAFLLLPQRIEA 259
Query: 121 ---LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL------GKKAAKVIP----- 166
+++ + +G+ H A TV G+++ WG+ GQLG G ++ K P
Sbjct: 260 RCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGS 319
Query: 167 -----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
P+ + CL+G + + G E ++AV GG SWG G G G E+ +
Sbjct: 320 GPQKGTPSCLPCLTG--ATEISCGSEHNLAVIGG-VCHSWGWNEHGMCGDGTEADV 372
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 24/149 (16%)
Query: 42 LWGNGDYGRLGLGS----LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG+ +G+L + L R + F+ + A+ G H + T TG V+ G
Sbjct: 235 VWGSNKHGQLASQAAFLLLPQR---IEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGR 291
Query: 98 NDFGQLG--ISENIGYSLE----PLRISGLKKEV----------VQISTGYHHSSAITVD 141
D+GQLG + G+ E L SG +K +IS G H+ A+ +
Sbjct: 292 ADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAV-IG 350
Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
G + WG N +G G G +A P P
Sbjct: 351 GVCHSWGWNEHGMCGDGTEADVWAPKPVP 379
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 128/284 (45%), Gaps = 20/284 (7%)
Query: 48 YGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI- 105
YG+LGLG E P + F K S++ + GG H+ +T+ G ++ GLN GQLG+
Sbjct: 25 YGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLG 84
Query: 106 -SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
+E+I Y P + S + Q++ G+ + +T +G++ G NS GQLG+ +
Sbjct: 85 HTEDIPY-FTPCK-SLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRC 142
Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG---RLGHGQESSILGFL 221
+ +P +E L A G +VA T G V WG G + RL GQ L
Sbjct: 143 V-VPQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQ---TLPLF 197
Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
+ E P + LE K AG HSA + + G VY++G L E P
Sbjct: 198 FTAKE--PSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK-HGQLANEAAFLPVP 254
Query: 282 SLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG 321
I + E V G H T G+++TWG + G LG
Sbjct: 255 QKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 131/303 (43%), Gaps = 42/303 (13%)
Query: 49 GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
G+LGLG E C + ++ +ACG T+ LTE G V + G N FGQLG+
Sbjct: 79 GQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHG 138
Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK--AAKVIP 166
+ P I K++VV I+ G H+ A T G ++ WG G G++ + +P
Sbjct: 139 PRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWG---TGLASCGRRLCPGQTLP 195
Query: 167 I------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ P++V L G + S ++T G+V WG+ HGQ ++ F
Sbjct: 196 LFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSN-----KHGQLANEAAF 250
Query: 221 LRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
L P+ I+ + KV +G+ H E G+++ +G K+ E
Sbjct: 251 LP-----VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYE 305
Query: 275 G----------NHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
G +R P+ + P+ + EV CG H + GG Y+WG NE+G
Sbjct: 306 GWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAII-GGVCYSWGWNEHGMC 364
Query: 321 GIG 323
G G
Sbjct: 365 GDG 367
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 119/238 (50%), Gaps = 31/238 (13%)
Query: 98 NDFGQLGI--SENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
N +GQLG+ E++ L P +++ + V +I+ G HS+ +T G+L++ G N +G
Sbjct: 23 NSYGQLGLGHKEDV---LLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDG 79
Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--H 211
QLGLG + IP T + L G +Q A G++ ++ +T G+VLS G+ G+LG H
Sbjct: 80 QLGLGH--TEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPH 137
Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD------- 264
G ++ P+ I EL KV AAG H+ +G V+ +G
Sbjct: 138 GPRRCVV----------PQAI-ELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGR 186
Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCL 320
R A+ PS ++ L S+ V+ G H+ LT GE+Y WGSN++G L
Sbjct: 187 RLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL 244
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 104/264 (39%), Gaps = 47/264 (17%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
P + E + G H+ LT+ G VY G N GQL + + P +I
Sbjct: 202 EPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQL--ANEAAFLPVPQKIEA 259
Query: 121 ---LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIP-- 166
++V I +G+ H A T G+++ WG+ GQLG +K +P
Sbjct: 260 HCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCS 319
Query: 167 -----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
+P+ CL+G + + G E ++A+ GG SWG G G G E+++
Sbjct: 320 RPPNSMPSSPHCLTG--ATEVSCGSEHNLAIIGG-VCYSWGWNEHGMCGDGTEANV---- 372
Query: 222 RSTSEYTPRLIKEL---EGVKVKIAAAGFL-------HSACIDENGRVYIFGDRAVD--- 268
+ P+ ++ L G+ V A L H A + + Y+ D D
Sbjct: 373 -----WAPKPVQALLSSSGLLVGCGAGHSLALCQLPAHPALVQDPKVTYLSPDAIEDTES 427
Query: 269 -KMLFQEGNHARRPSLISKLPYSE 291
K + +E N R S S S+
Sbjct: 428 QKAMDKERNWKERQSETSTQSQSD 451
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 32/154 (20%)
Query: 42 LWGNGDYGRLGLGSLESRWRPVV----CSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
+WG+ +G+L + E+ + PV F+ + A+ G H + TETG ++ G
Sbjct: 235 VWGSNKHGQL---ANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGR 291
Query: 98 NDFGQLG--ISENIGYSLE------------------PLRISGLKKEVVQISTGYHHSSA 137
D+GQLG + G+ LE P ++G ++S G H+ A
Sbjct: 292 ADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTG----ATEVSCGSEHNLA 347
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
I + G Y WG N +G G G +A P P +
Sbjct: 348 I-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQA 380
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
D +L Q+ N +P + + + GG H+ V+T GG+L+ G N++G LG+G
Sbjct: 35 DVLLPQQLNDFCKPRSVRR------ITGGGGHSAVVTDGGDLFVCGLNKDGQLGLG 84
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 31/300 (10%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG S+ R +P + + + GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLSQSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE----- 214
K + +P +V+ + + + A G + V +T G + + G G G+LG E
Sbjct: 158 PMKKSM-VPVQVQLDAPVV--KVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANR 214
Query: 215 --SSILGFLRSTSEYTPRLI----KELEG-VKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
LG L PR + + G V+ + A G + I G VY FG
Sbjct: 215 GGRQGLGRL-----LVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNY 269
Query: 268 DKMLFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
++ P ++ S + G +HT + S G+ Y+ G E G LG+G
Sbjct: 270 HQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG 329
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 25/265 (9%)
Query: 76 LACGGAHTLFLTETGCVYATG--LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
++ G +HT LTE G V+ G ++ G +G+ E + S+ P+++ L VV++++G
Sbjct: 124 VSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDAPVVKVASGND 182
Query: 134 HSSAITVDGELYMWGKNSNGQLGL---------GKKAAKVIPIPTKVECLSG-----IFT 179
H +T DG+LY G GQLG G++ + +P V S +
Sbjct: 183 HLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRF 242
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ A G + A++ G V +G +LG S F+ K G
Sbjct: 243 QDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSC--FIPQNLTSFKNSTKSWVGF- 299
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGY 298
+ G H+ C+D G+ Y G ++ EG + P+LIS+LP V CG
Sbjct: 300 ----SGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGAS 355
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
++ G ++ WG N LG G
Sbjct: 356 VGYAVSKDGRVFAWGMGTNYQLGTG 380
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 106/258 (41%), Gaps = 43/258 (16%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ E++ +P + L ++VVQ G H+ ++
Sbjct: 26 SHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP-LLQDVVQAEAGGMHTVCLSQ 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
W GS R +G ++G L + + +L+ VK+ A+G H + +G +Y
Sbjct: 143 W---GSFRDNNG----VIGLLEPMKKSMVPVQVQLDAPVVKV-ASGNDHLVMLTNDGDLY 194
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISK-----------LPYS--------------EEVVC 295
G ++G R P L + +P ++ C
Sbjct: 195 TLG-------CGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFC 247
Query: 296 GGYHTCVLTSGGELYTWG 313
G Y T ++ G +Y +G
Sbjct: 248 GAYFTFAISREGHVYGFG 265
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + G P ++ K K V S G HH
Sbjct: 247 CGAYFTFAISREGHVYGFGLSNYHQLG-TPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A+ IPT + L A G AV+
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGE-GAEEKSIPTLISRLP--VVSSVACGASVGYAVSK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQ+ + T K+LE V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG-------KQLENRVVLTVSSGGQHTVLL 414
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA---LACGGAHTLFLTETGCVYATGLND 99
+G +Y +LG S + P ++F K+S K+ + G HT+ + G Y+ G +
Sbjct: 264 FGLSNYHQLGTPGTGSCFIPQNLTSF-KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAE 322
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G+LG+ E P IS L V ++ G A++ DG ++ WG +N QLG G+
Sbjct: 323 YGRLGLGEGAEEKSIPTLISRLPV-VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQ 381
Query: 160 KAAKVIPI 167
P+
Sbjct: 382 DEDAWSPV 389
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGG 297
KVK++ H + E G V G V ++ E R+ P+L+ L + GG
Sbjct: 22 KVKVS-----HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGG 76
Query: 298 YHTCVLTSGGELYTWGSNENGCLG 321
HT L+ G++Y++G N+ G LG
Sbjct: 77 MHTVCLSQSGQVYSFGCNDEGALG 100
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 44 GNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G +YGRLGLG E + P + S + ++ACG + +++ G V+A G+ Q
Sbjct: 319 GRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQ 376
Query: 103 LGISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVD 141
LG ++ + P+ ++G + E V+ +S+G H+ + D
Sbjct: 377 LGTGQDED-AWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKD 417
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 99/252 (39%), Gaps = 47/252 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G + P + + + A ACG HTL LTE G VY G N GQ
Sbjct: 147 WGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQ 206
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--- 159
LG L P I + +V+++ G S + G LY +G GQLG
Sbjct: 207 LGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGK 266
Query: 160 --------------------------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
K +V+P+P + + A G ++ +
Sbjct: 267 FIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPN-------VVARDVACGANHTLVLD 319
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSA 251
+V SWG GG GRLGH ++ E PRL+K + G G+ S
Sbjct: 320 SQKRVFSWGFGGYGRLGHAEQK---------DEMVPRLVKLFDFPGRGATQIYCGYQCSF 370
Query: 252 CIDENGRVYIFG 263
+ E G ++ +G
Sbjct: 371 ALSEMGGLFFWG 382
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 111/244 (45%), Gaps = 41/244 (16%)
Query: 80 GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEV-VQISTGYHHSSA 137
AH+L +T G +++ G ND GQLG + LE P I GL +EV V + G +H+ A
Sbjct: 132 AAHSLIITTEGKLWSWGRNDKGQLGHGDT--KRLEAPKLIEGLGEEVIVAAACGRNHTLA 189
Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
+T +G +Y +G+N GQLG G + V+ P ++ +G + A G E S+ V G
Sbjct: 190 LTENGTVYTFGENKLGQLGQGNQTDAVLS-PATIQ-YNGQPIVKVACGAEFSMIVDCKGN 247
Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
+ S+G G+LGH + IA A + C
Sbjct: 248 LYSFGCPEYGQLGHNSDGKF------------------------IARAQRIEFDCELIPR 283
Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
RV IF ++ D G P+++++ +V CG HT VL S +++WG
Sbjct: 284 RVAIFIEKTKD------GQVLPVPNVVAR-----DVACGANHTLVLDSQKRVFSWGFGGY 332
Query: 318 GCLG 321
G LG
Sbjct: 333 GRLG 336
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 116/290 (40%), Gaps = 45/290 (15%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LG G+ + + +ACG ++ + G +Y+ G ++GQ
Sbjct: 199 FGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQ 258
Query: 103 LG---------ISENIGYSLE--PLRISGLKKEVVQ-------------ISTGYHHSSAI 138
LG ++ I + E P R++ ++ ++ G +H+ +
Sbjct: 259 LGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVL 318
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
++ WG G+LG ++ +++P K+ G Q G++ S A++ G +
Sbjct: 319 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGL 378
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--FLHSACIDEN 256
WG + R ES++ P+ +++L G K++ A G + A D
Sbjct: 379 FFWGVTNTSR-----ESTMY----------PKAVQDLCGWKIRSLACGKSSIIVAADDST 423
Query: 257 ---GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
G FG+ + A+ + + YSE+VV G H+ V+
Sbjct: 424 ISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGV-YSEQVVMGYSHSLVI 472
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 235 LEGVKVKIAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
L V+V +G HS I G+++ +G ++ + P LI L EE
Sbjct: 118 LSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGL--GEE 175
Query: 293 VV----CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V+ CG HT LT G +YT+G N+ G LG G
Sbjct: 176 VIVAAACGRNHTLALTENGTVYTFGENKLGQLGQG 210
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 145/298 (48%), Gaps = 27/298 (9%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG ++ R +P + S E + GG HT+ L+++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLSKSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E L
Sbjct: 158 PMKKSM-VPVQVQL--DVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPE---LF 211
Query: 220 FLRSTSEYTPRLIKE----LEG------VKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
R + RL+ L+ V+ + A G + I G VY FG +
Sbjct: 212 ANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQ 271
Query: 270 MLFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ S + G +HT + S G+ Y+ G E G LG+G
Sbjct: 272 LGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLG 329
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 43/258 (16%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ EN+ +P +S + ++VVQ G H+ ++
Sbjct: 26 SHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVS-IPEDVVQAEAGGMHTVCLSK 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTDDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
W GS R +G ++G L + + +L+ VK+ A+G H + +G +Y
Sbjct: 143 W---GSFRDNNG----VIGLLEPMKKSMVPVQVQLDVPVVKV-ASGNDHLVMLTADGDLY 194
Query: 261 IFGDRAVDKMLFQEGNHARRPSLISK-----------LPYS--------------EEVVC 295
G ++G R P L + +P ++ C
Sbjct: 195 TLG-------CGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFC 247
Query: 296 GGYHTCVLTSGGELYTWG 313
G Y T ++ G +Y +G
Sbjct: 248 GAYFTFAISHEGHVYGFG 265
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + P ++ K K V S G HH
Sbjct: 247 CGAYFTFAISHEGHVYGFGLSNYHQLG-TPGTESCFIPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A+ IPT + L + + A G AVT
Sbjct: 306 TVCMDSEGKAYSLGRAEYGRLGLGE-GAEEKSIPTLISRLPAVSS--VACGASVGYAVTK 362
Query: 195 GGKVLSWGAGGSGRLGHGQE 214
G+V +WG G + +LG GQ+
Sbjct: 363 DGRVFAWGMGTNYQLGTGQD 382
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA---LACGGAHTLFLTETGCVYATGLND 99
+G +Y +LG ES + P ++F K+S K+ + G HT+ + G Y+ G +
Sbjct: 264 FGLSNYHQLGTPGTESCFIPQNLTSF-KNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAE 322
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G+LG+ E P IS L V ++ G A+T DG ++ WG +N QLG G+
Sbjct: 323 YGRLGLGEGAEEKSIPTLISRLPA-VSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQ 381
Query: 160 KAAKVIPI 167
P+
Sbjct: 382 DEDAWSPV 389
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 44 GNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G +YGRLGLG E + P + S ++ ++ACG + +T+ G V+A G+ Q
Sbjct: 319 GRAEYGRLGLGEGAEEKSIPTLISRLP--AVSSVACGASVGYAVTKDGRVFAWGMGTNYQ 376
Query: 103 LGISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGE 143
LG ++ + P+ + G + E V+ +S+G H+ + D E
Sbjct: 377 LGTGQDED-AWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKE 419
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---C 295
KVK++ H + E G V G V ++ E R+ + +P E+VV
Sbjct: 22 KVKVS-----HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIP--EDVVQAEA 74
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLG 321
GG HT L+ G++Y++G N+ G LG
Sbjct: 75 GGMHTVCLSKSGQVYSFGCNDEGALG 100
Score = 31.2 bits (69), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 37 RRFAALWGNGDYGRLGLGSLESRWRPV--VCSAFEKHSLKALACGGAHTLFLTE 88
R FA WG G +LG G E W PV + E + +++ GG HT+ L +
Sbjct: 365 RVFA--WGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVK 416
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 89.4 bits (220), Expect = 3e-17, Method: Composition-based stats.
Identities = 90/333 (27%), Positives = 141/333 (42%), Gaps = 54/333 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLK--ALACGGAHTLFLTETGCVYATGLND 99
+G+G G+LG G+LES P + F+ K SL+ ++A GG H+L LT G VY+ G ND
Sbjct: 212 FGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGND 271
Query: 100 FGQLG---------------ISENIGYSLEPLRISGL----------------------- 121
QLG I+ NI Y+ +
Sbjct: 272 SCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNS 331
Query: 122 -----KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
K ++V++S G + S+ IT G L+ +G+ +G+LGLG+++ + P V+ L G
Sbjct: 332 SSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQG 391
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
F + G S+ +T G V S+G G+LG G S+ + + ++ +
Sbjct: 392 HFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQ 451
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHARRPSLISKLPYSE--- 291
+ + +AG HS I +N Y +G D V P LI+
Sbjct: 452 PINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNV 511
Query: 292 ---EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+V G H ++ G LY+WG N LG
Sbjct: 512 KFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLG 544
Score = 87.0 bits (214), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 15/191 (7%)
Query: 43 WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
+G GD+GRLGLG SL + P + + + H + ++ GG H+L LT G V++ G ND
Sbjct: 362 FGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQ 421
Query: 101 GQLGISENIGYSLEPLRISGLKK---------EVVQISTGYHHSSAITVDGELYMWGKNS 151
GQLGI P +I + ++++S G +HS AI+ + + Y WG++
Sbjct: 422 GQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSD 481
Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTK----QAALGFEQSVAVTGGGKVLSWGAGGSG 207
G LG +P + S + + GF+ +VA++ G + SWG
Sbjct: 482 YGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQ 541
Query: 208 RLGHGQESSIL 218
RLG + + L
Sbjct: 542 RLGFKSDENQL 552
Score = 59.3 bits (142), Expect = 4e-08, Method: Composition-based stats.
Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 71/257 (27%)
Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLSGIFTK 180
++++V ISTG HSS IT G LY +G G+LG G + P + + +
Sbjct: 187 QQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVV 246
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK------- 233
A G + S+A+T GKV SWG S +LG G SS S+ P+LI
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSS------SSYYSLPQLINFNISYNN 300
Query: 234 ----------------ELEGV---------------KVKIA--AAGFLHSACIDENGRVY 260
+G K+KI + G SA I + G ++
Sbjct: 301 NNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLF 360
Query: 261 IFGDRAVDKMLFQEGNHAR------------RPSLISKLP--YSEEVVCGGYHTCVLTSG 306
FG G+H R P L+ L + ++ GG H+ VLT+
Sbjct: 361 TFG----------RGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNK 410
Query: 307 GELYTWGSNENGCLGIG 323
G ++++G N+ G LGIG
Sbjct: 411 GLVFSFGRNDQGQLGIG 427
Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKE-VVQISTGYH 133
L+CG + +T+ G ++ G D G+LG+ E ++ P + L+ ++ +S+G
Sbjct: 343 LSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGG 402
Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--------IFTKQAALG 185
HS +T G ++ +G+N GQLG+G + + IP +++ I + + G
Sbjct: 403 HSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQT-IPKQIQWFQTSQQQQQQPINIIKVSAG 461
Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE----LEGVKVK 241
S+A++ +WG G LG + P LI ++ VK
Sbjct: 462 GYHSIAISDNNDTYAWGRSDYGVLGTSIDV-------QGDRNLPVLINSNSVVVDNVKFI 514
Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
++GF H+ + +G +Y +G A ++ F+ + P
Sbjct: 515 DVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTP 554
Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 39 FAALWGNG--DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
+ +WGNG +Y + S+ + + + ++ G H+ F+T+ G +Y G
Sbjct: 160 YITIWGNGIRNYKNCNMSSIG------FSEMYNQQKIVLISTGAIHSSFITDQGNLYTFG 213
Query: 97 LNDFGQLGISENIGYSLEPLRISGLKKE----VVQISTGYHHSSAITVDGELYMWGKNSN 152
G+LG YS P + + + VV I+ G HS A+T+ G++Y WG N +
Sbjct: 214 DGLLGKLGHGNLESYS-SPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDS 272
Query: 153 GQLGLG 158
QLGLG
Sbjct: 273 CQLGLG 278
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 33 STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
ST + FA WG GD GRLGLG+ ES P + + CG ++ LT G
Sbjct: 459 STERELFA--WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQA 516
Query: 93 YATGLNDFGQLG---------------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSS 136
A G N F +LG + E + ++L L + L +E ++ I G HS+
Sbjct: 517 LACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTL--LGSAPLDQEPLLSIDLGTAHSA 574
Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
A+T G+ Y +G N +GQLG + P KV+ L GI A G +VA+
Sbjct: 575 AVTASGDCYTFGSNQHGQLGTNTRRGSRAP--CKVQGLEGIKMAMVACGDAFTVAIGAES 632
Query: 197 KVLSWGAGGSGRLGHGQESSILGF---LRSTSEYT 228
+V SWG G GRLG E + L L T YT
Sbjct: 633 EVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYT 667
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 111/267 (41%), Gaps = 29/267 (10%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++K +ACG T LT+ G + G G LG S + + L E+VQ++ G
Sbjct: 392 TIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACG 451
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H A++ + EL+ WG+ +G+LGLG + + P +V G ++ G + S+
Sbjct: 452 ASHVLALSTERELFAWGRGDSGRLGLGTRESHSCP--QQVPMPPGQEAQRVVCGIDSSMI 509
Query: 192 VTGGGKVLSWGAGGSGRLG------------HGQESSILGFL---RSTSEYTPRLIKELE 236
+T G+ L+ G+ +LG H Q L F + + P L +L
Sbjct: 510 LTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDL- 568
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
G HSA + +G Y FG ++ +R P + L V
Sbjct: 569 ---------GTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVA 619
Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLG 321
CG T + + E+Y+WG G LG
Sbjct: 620 CGDAFTVAIGAESEVYSWGKGARGRLG 646
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 102/250 (40%), Gaps = 22/250 (8%)
Query: 27 CKRWISSTLQRR-FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
C + ++ L R +G+G G LG GSL +P + A + + +ACG +H L
Sbjct: 398 CGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLA 457
Query: 86 LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
L+ ++A G D G+LG+ +S +E ++ G S +TV G+
Sbjct: 458 LSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQAL 517
Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAA----------LGFEQSVAVT 193
G N +LGL + P+P + E LS A LG S AVT
Sbjct: 518 ACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVT 577
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G ++G+ G+LG P ++ LEG+K+ + A G + I
Sbjct: 578 ASGDCYTFGSNQHGQLGTNTRR---------GSRAPCKVQGLEGIKMAMVACGDAFTVAI 628
Query: 254 DENGRVYIFG 263
VY +G
Sbjct: 629 GAESEVYSWG 638
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 16/215 (7%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG---LGKKAAKVIP--IPT 169
PLR+ L EVVQ++ G + +T G L +W G G L + P I
Sbjct: 324 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISR 383
Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
+E SG+ K A G + +T G ++++G+G +G LGHG + I P
Sbjct: 384 FLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDI---------SQP 434
Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP- 288
+++ L G ++ A G H + ++ +G ++ P + P
Sbjct: 435 TIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPG 494
Query: 289 -YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ VVCG + +LT G+ GSN LG+
Sbjct: 495 QEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL 529
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL-RSTSEYTPRLIKELEGVK 239
Q A G Q VT G+++ W A LG G S + G + + ++ R ++ GV
Sbjct: 336 QVAAGRTQKAGVTRSGRLILWEAPP---LGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
+K A G +AC+ + G + FG + + +P+++ L E +V CG
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGA 452
Query: 298 YHTCVLTSGGELYTWGSNENGCLGIG 323
H L++ EL+ WG ++G LG+G
Sbjct: 453 SHVLALSTERELFAWGRGDSGRLGLG 478
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 47/252 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G + P + A ++ ACG HTL LT+TG V+A G N GQ
Sbjct: 172 WGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQ 231
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--- 159
LG+ P +I + + +++ G S + G LY +G GQLG
Sbjct: 232 LGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGK 291
Query: 160 --------------------------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
K +++P+P + + A G ++ +
Sbjct: 292 FIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPN-------VVVRDVACGANHTLVLD 344
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSA 251
+V SWG GG GRLGH ++ E PRL+K + G AG+ S
Sbjct: 345 SQKRVFSWGFGGYGRLGHAEQK---------DEMVPRLVKLFDFPGRGATQIYAGYTCSF 395
Query: 252 CIDENGRVYIFG 263
+ E G ++ +G
Sbjct: 396 AVSEVGGLFFWG 407
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 39/242 (16%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAIT 139
AH+L +T G +++ G N+ GQLG + P I L E +V + G +H+ A+T
Sbjct: 158 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA-PRLIEALSHEAIVLAACGRNHTLALT 216
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
G ++ +G+N GQLGLG + +P P ++ +G + A G E S+ + G +
Sbjct: 217 DTGSVFAFGENKMGQLGLGNQT-DAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
S+G G+LGH + IA A + C RV
Sbjct: 275 SFGCPEYGQLGHNSDGKF------------------------IARAQRIEYDCELVPRRV 310
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
IF ++ D + N R +V CG HT VL S +++WG G
Sbjct: 311 AIFIEKTKDGQILPVPNVVVR-----------DVACGANHTLVLDSQKRVFSWGFGGYGR 359
Query: 320 LG 321
LG
Sbjct: 360 LG 361
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LGLG+ + + +ACG ++ + G +Y+ G ++GQ
Sbjct: 224 FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQ 283
Query: 103 LG---------ISENIGYSLE--PLRISGLKKE-------------VVQISTGYHHSSAI 138
LG ++ I Y E P R++ ++ V ++ G +H+ +
Sbjct: 284 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 343
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
++ WG G+LG ++ +++P K+ G Q G+ S AV+ G +
Sbjct: 344 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGL 403
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
WGA + R ES++ P+ +++L G +++ A G
Sbjct: 404 FFWGATNTSR-----ESTMY----------PKAVQDLCGWRIRSLACG 436
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 235 LEGVKVKIAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
L GV+V+ +G HS I G+++ +G ++ + P LI L +
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAI 202
Query: 293 VV--CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V+ CG HT LT G ++ +G N+ G LG+G
Sbjct: 203 VLAACGRNHTLALTDTGSVFAFGENKMGQLGLG 235
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 62/169 (36%), Gaps = 50/169 (29%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQIS 129
++ +ACG HTL L V++ G +G+LG +E + P + + QI
Sbjct: 330 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDFPGRGATQIY 388
Query: 130 TGYHHSSAITVDGELYMWGKNSN------------------------------------- 152
GY S A++ G L+ WG +
Sbjct: 389 AGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADEST 448
Query: 153 ---------GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G+LG G K +V+ L GIF++Q A+G+ S+ +
Sbjct: 449 ISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 497
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 101/252 (40%), Gaps = 47/252 (18%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG + G+LG G + P + + + ACG HTL LTETG V+A G N GQ
Sbjct: 174 WGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQ 233
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--- 159
LG+ P +I + + +++ G S + G LY +G GQLG
Sbjct: 234 LGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGK 293
Query: 160 --------------------------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
K +++P+P + + A G ++ +
Sbjct: 294 FIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPN-------VVVRDVACGANHTLVLD 346
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSA 251
+V SWG GG GRLGH ++ E PRL+K + G AG+ S
Sbjct: 347 SQKRVFSWGFGGYGRLGHAEQK---------DEMVPRLVKLFDFPGRGASQIYAGYTCSF 397
Query: 252 CIDENGRVYIFG 263
+ E G ++ +G
Sbjct: 398 AVSEVGGLFFWG 409
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 104/242 (42%), Gaps = 39/242 (16%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAIT 139
AH+L +T G +++ G N+ GQLG + P I GL EV V + G +H+ A+T
Sbjct: 160 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEA-PRLIEGLSHEVIVSAACGRNHTLALT 218
Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
G ++ +G+N GQLGLG + +P P ++ +G + A G E S+ + G +
Sbjct: 219 ETGSVFAFGENKMGQLGLGNQT-DAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
S+G G+LGH + IA A + C RV
Sbjct: 277 SFGCPEYGQLGHNSDGKF------------------------IARAQRIEYDCELVPRRV 312
Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
IF ++ D + N R +V CG HT VL S +++WG G
Sbjct: 313 AIFIEKTKDGQILPVPNVVVR-----------DVACGANHTLVLDSQKRVFSWGFGGYGR 361
Query: 320 LG 321
LG
Sbjct: 362 LG 363
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LGLG+ + + +ACG ++ + G +Y+ G ++GQ
Sbjct: 226 FGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 285
Query: 103 LG---------ISENIGYSLE--PLRISGLKKE-------------VVQISTGYHHSSAI 138
LG ++ I Y E P R++ ++ V ++ G +H+ +
Sbjct: 286 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 345
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
++ WG G+LG ++ +++P K+ G Q G+ S AV+ G +
Sbjct: 346 DSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGL 405
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
WGA + R ES++ P+ +++L G +++ A G
Sbjct: 406 FFWGATNTSR-----ESTMY----------PKAVQDLCGWRIRSLACG 438
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 62/169 (36%), Gaps = 50/169 (29%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQIS 129
++ +ACG HTL L V++ G +G+LG +E + P + + QI
Sbjct: 332 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKD-EMVPRLVKLFDFPGRGASQIY 390
Query: 130 TGYHHSSAITVDGELYMWGKNSN------------------------------------- 152
GY S A++ G L+ WG +
Sbjct: 391 AGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADEST 450
Query: 153 ---------GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
G+LG G K +V+ L GIF++Q A+G+ S+ +
Sbjct: 451 ISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 499
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 235 LEGVKVKIAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
L GV+V+ +G HS I G+++ +G ++ + P LI L S E
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGL--SHE 202
Query: 293 VV----CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
V+ CG HT LT G ++ +G N+ G LG+G
Sbjct: 203 VIVSAACGRNHTLALTETGSVFAFGENKMGQLGLG 237
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 129/296 (43%), Gaps = 63/296 (21%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK------EVVQ 127
+A+ACG H L L+ +G + A G N FGQ G +G+S RI+ L + + +
Sbjct: 779 RAIACGAEHILVLSSSGQLSAWGGNRFGQCG----VGHS---FRIANLHQVDGDWPAIEK 831
Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
I+ G HS+ I DG L+ +G GQLG G + +PT+V L T Q A G
Sbjct: 832 IACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVT-QIACGRA 890
Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
+V +T G+VL G+G G++G + ++ +TP + L +V+ A +
Sbjct: 891 HTVVLTDTGRVLVCGSGSYGQMGVDDD------IKKVFAFTPLPLGPL---RVRDIATHY 941
Query: 248 LHSACIDENGRVY------------IFGDRAVDKMLFQEGNHARRPS------------- 282
HS CI E+ RV+ +F + + + PS
Sbjct: 942 YHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLN 1001
Query: 283 LISKLPYSE---------------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
L +++P + V CG H+ ++TS G LYTWG + LG G
Sbjct: 1002 LPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHG 1057
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 137/329 (41%), Gaps = 69/329 (20%)
Query: 43 WGNGDYGRLGLG---------SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
WG +G+ G+G ++ W A EK +ACG H+ F+ G ++
Sbjct: 800 WGGNRFGQCGVGHSFRIANLHQVDGDW-----PAIEK-----IACGQFHSAFICSDGSLW 849
Query: 94 ATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
G +GQLG N L P R++GL +V QI+ G H+ +T G + + G S
Sbjct: 850 TFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSY 909
Query: 153 GQLGLGKKAAKVI---PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG---- 205
GQ+G+ KV P+P L + + A + S+ +T +V WG
Sbjct: 910 GQMGVDDDIKKVFAFTPLP-----LGPLRVRDIATHYYHSICITEDNRVFEWGRNPQELK 964
Query: 206 ----------SGRLGHGQESSILGFLRSTSEYTPRL--------------IKE----LEG 237
S +L + ++ S ST+ TPR+ ++E L+G
Sbjct: 965 MRMFVMKKIRSAQLKNTEDPSSPS--PSTNGSTPRVNLNLPAEIPREDLGLREVKHFLDG 1022
Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EV 293
V + A G HSA I G +Y +G + +D L GN R P + + ++ V
Sbjct: 1023 NIVSV-ACGLSHSALITSEGTLYTWG-KGLDYQL-GHGNKNERMEPHQVFEPNGAKWVNV 1079
Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGI 322
G HT T G ++ WG N+ G G+
Sbjct: 1080 SLGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 112/271 (41%), Gaps = 66/271 (24%)
Query: 41 ALW--GNGDYGRLGLGS-------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
+LW G G +G+LG G + +R ++C + +ACG AHT+ LT+TG
Sbjct: 847 SLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQ------IACGRAHTVVLTDTGR 900
Query: 92 VYATGLNDFGQLGISENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
V G +GQ+G+ ++I ++ PL + L+ V I+T Y+HS IT D ++ WG+
Sbjct: 901 VLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR--VRDIATHYYHSICITEDNRVFEWGR 958
Query: 150 NS--------------NGQLGLGKKAAKVIP------------IPTKV-----------E 172
N + QL + + P +P ++
Sbjct: 959 NPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPREDLGLREVKH 1018
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
L G A G S +T G + +WG G +LGHG ++ P +
Sbjct: 1019 FLDGNIV-SVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKN---------ERMEPHQV 1068
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
E G K + G H+ ++G V+ +G
Sbjct: 1069 FEPNGAKWVNVSLGNNHTIASTDDGSVFAWG 1099
Score = 35.0 bits (79), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 80/221 (36%), Gaps = 51/221 (23%)
Query: 136 SAITVDGELYMWGKNSNGQLGL--------GKKAAKVIP---------------IPTKVE 172
+ IT D L +WG +N Q + K++ V +P +E
Sbjct: 713 ATITEDDRLMIWGNFTNAQQRMEMPQMNAKSKRSDSVTNGAPTLPPPAPKPEQHLPRVLE 772
Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
G + A G E + ++ G++ +WG G+ G G I + ++
Sbjct: 773 -YPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWP---- 827
Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFG----------DRAVDKMLFQEGNHARRPS 282
++ A G HSA I +G ++ FG R L R
Sbjct: 828 ------AIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVP----TRVNG 877
Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
LI K+ ++ CG HT VLT G + GS G +G+
Sbjct: 878 LICKV---TQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVD 915
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 33/267 (12%)
Query: 78 CGGAHTLFLTETGCVYATGL---NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
C T +T+ GC + G +D G LG S++ + EP ++ E+ Q++TG H
Sbjct: 181 CSDNLTAAITDNGCCFTWGTFRCSD-GVLGYSDSQKRTAEPTQMR--LPEICQLATGTDH 237
Query: 135 SSAITVDGELYMWGKNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
A+T G++Y WG QLG ++ + P P L I + A G S
Sbjct: 238 IIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPL---ALKNIISVGA--GSYHSF 292
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
A+ G+V +WG + + G E G + + P L+ LEG VK G H+
Sbjct: 293 AIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITK----PTLVDALEGYNVKSITGGEHHT 348
Query: 251 ACIDENGRVYIFG----------DRAVDKMLFQE--GN--HARRPSLISKLPYSEEVVCG 296
+ E+GRV +G D A+ + + ++ GN + P++I L +VVCG
Sbjct: 349 LALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCG 408
Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
+H +TS G++Y+WGS EN +G G
Sbjct: 409 THHNLAVTSDGKVYSWGSAENYEVGQG 435
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 141/316 (44%), Gaps = 43/316 (13%)
Query: 36 QRRFAALWGNGDYGRLGLGSLE------SRWRPVVCSAFEKHSLKALACGGAHTLFLTET 89
+R ++G+G LG+G E R P++ + +K + LA GG H+ L+
Sbjct: 69 ERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILST--DKVGVVDLAVGGMHSAALSHD 126
Query: 90 GCVYATGLNDFGQLG------ISEN---IGYSL---EPLRISGLKK--EVVQISTGYHHS 135
G VY G+ND LG EN + L P ++ G V ++ + +
Sbjct: 127 GRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLT 186
Query: 136 SAITVDGELYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
+AIT +G + WG + S+G LG + K PT++ L I Q A G + +A+T
Sbjct: 187 AAITDNGCCFTWGTFRCSDGVLGYS-DSQKRTAEPTQMR-LPEIC--QLATGTDHIIALT 242
Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
GKV +WG G +LG + R TP+ + + V AG HS I
Sbjct: 243 TTGKVYTWGNGQQFQLGRR-----MLERRRLQGLTPQPLALKNIISV---GAGSYHSFAI 294
Query: 254 DENGRVYIFGDR-----AVDKMLFQEGNHARRPSLISKLP-YSEEVVCGG-YHTCVLTSG 306
D GRVY +G ++ +EG +P+L+ L Y+ + + GG +HT L
Sbjct: 295 DNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLED 354
Query: 307 GELYTWGSNENGCLGI 322
G + WG ++ LGI
Sbjct: 355 GRVLAWGRDDRHQLGI 370
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 85/187 (45%), Gaps = 28/187 (14%)
Query: 61 RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----------- 109
+P + A E +++K++ G HTL L E G V A G +D QLGI +N
Sbjct: 326 KPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKG 385
Query: 110 -GYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
Y L P I GL V+Q+ G HH+ A+T DG++Y WG N ++G G V +
Sbjct: 386 NNYYLSTPTIIPGLTN-VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVA-V 443
Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
PT + A+ E ++ V G G S AG + + E + ++S E
Sbjct: 444 PT--------LVRSKAIK-EVAIRVAGAGGQFSIIAG----IPNASEEPVANGIKSEPEN 490
Query: 228 TPRLIKE 234
+L E
Sbjct: 491 EKKLKTE 497
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 101/245 (41%), Gaps = 33/245 (13%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG D G+LG G ++ P + + + ACG HTL LTE G VYA G N GQ
Sbjct: 165 WGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQ 224
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---GK 159
LG+ P +I + + +++ G S + G LY +G GQLG GK
Sbjct: 225 LGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGK 284
Query: 160 KAAKVIPIPTKVECLS-------------------GIFTKQAALGFEQSVAVTGGGKVLS 200
A+ I E ++ + + A G S+ + +V S
Sbjct: 285 YIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFS 344
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGR 258
WG GG GRLGH ++ E PRL+K + G AG S + E G
Sbjct: 345 WGFGGYGRLGHSEQR---------DEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGG 395
Query: 259 VYIFG 263
++ +G
Sbjct: 396 LFFWG 400
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 27/265 (10%)
Query: 73 LKALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQIS 129
++++A G AH+L +T G +++ G ND GQLG + I P I LK EV V +
Sbjct: 141 VRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGD-IKRIDVPKLIESLKGEVFVHAA 199
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G +H+ A+T +G +Y +G+N GQLGLG K +P P ++ +G + A G E S
Sbjct: 200 CGRNHTLALTENGSVYAFGENKMGQLGLGNK-TDAVPSPAQI-LYNGQPITKVACGAEFS 257
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE--------------- 234
+ + G + S+G G+LGH + + + EY LI
Sbjct: 258 MIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRI-EYDCELIARRIAIFIEKTKDGQIL 316
Query: 235 -LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY---- 289
+ V V+ A G HS +D RV+ +G ++ E P L+ +
Sbjct: 317 PVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRG 376
Query: 290 SEEVVCGGYHTCVLTSGGELYTWGS 314
+ ++ G + ++ G L+ WG+
Sbjct: 377 AAQIYAGATCSFAVSEMGGLFFWGA 401
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 108/250 (43%), Gaps = 41/250 (16%)
Query: 102 QLGISENIGYSL-EPLR---ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
Q N+G +L P R ++G++ V + HS ITV+G+L+ WG+N GQLG
Sbjct: 116 QQAAYRNLGQNLWGPHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGH 175
Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
G K I +P +E L G AA G ++A+T G V ++G G+LG G ++
Sbjct: 176 GD--IKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGENKMGQLGLGNKTDA 233
Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ-EGN 276
+ +P I G + A G S +D G +Y FG ++ +G
Sbjct: 234 VP--------SPAQIL-YNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGK 284
Query: 277 H--------------ARRPSLISK-------LPYSEEVV----CGGYHTCVLTSGGELYT 311
+ ARR ++ + LP VV CG H+ +L S +++
Sbjct: 285 YIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFS 344
Query: 312 WGSNENGCLG 321
WG G LG
Sbjct: 345 WGFGGYGRLG 354
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 114/292 (39%), Gaps = 49/292 (16%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G G+LGLG+ + + +ACG ++ + G +Y+ G ++GQ
Sbjct: 217 FGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYSFGCPEYGQ 276
Query: 103 LGISENIGYSLEPLRIS-----------------------GLKKEVVQ-ISTGYHHSSAI 138
LG + + Y RI + VV+ I+ G +HS +
Sbjct: 277 LGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLIL 336
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
++ WG G+LG ++ +++P K+ G Q G S AV+ G +
Sbjct: 337 DSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYAGATCSFAVSEMGGL 396
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI---DE 255
WGA + R S P+ +++L G KV+ A G S+ I DE
Sbjct: 397 FFWGATNTSR---------------DSTMYPKAVQDLCGWKVRSLACG--KSSIIVAADE 439
Query: 256 N----GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
+ G FG+ + A+ + + YS++V+ G HT V+
Sbjct: 440 STISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGI-YSDQVIMGNSHTLVV 490
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 61/158 (38%)
Query: 168 PTKVECLSGIFTKQAALG--FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
P + CL+G+ + A G S+ +T GK+ SWG G+LGHG I
Sbjct: 130 PHRYGCLTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRI-------- 181
Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
P+LI+ L+G F+H+AC
Sbjct: 182 -DVPKLIESLKG-------EVFVHAAC--------------------------------- 200
Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
G HT LT G +Y +G N+ G LG+G
Sbjct: 201 ----------GRNHTLALTENGSVYAFGENKMGQLGLG 228
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 143/298 (47%), Gaps = 27/298 (9%)
Query: 44 GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G GD G+LGLG S+ R +P + + + GG HT+ L ++G VY+ G ND G
Sbjct: 41 GQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLNQSGQVYSFGCNDEGA 98
Query: 103 LGISENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
LG ++ G + P ++ L+++VVQ+S G H++A+T DG +++WG +++NG +GL +
Sbjct: 99 LGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLE 157
Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
K + +P +V+ + + A G + V +T G + + G G G+LG E L
Sbjct: 158 PMKKSM-VPVQVQLDMPVV--KVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPE---LF 211
Query: 220 FLRSTSEYTPRLIKE----LEG------VKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
R + RL+ L+ V+ + A G + I G VY FG +
Sbjct: 212 ANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQ 271
Query: 270 MLFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+ P ++ S + G +HT + S G+ Y+ G E G LG+G
Sbjct: 272 LGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLG 329
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 25/265 (9%)
Query: 76 LACGGAHTLFLTETGCVYATG--LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
++ G +HT LTE G V+ G ++ G +G+ E + S+ P+++ L VV++++G
Sbjct: 124 VSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ-LDMPVVKVASGND 182
Query: 134 HSSAITVDGELYMWGKNSNGQLGL---------GKKAAKVIPIPTKVECLSG-----IFT 179
H +T DG+LY G GQLG G++ + + +P V S +
Sbjct: 183 HLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRF 242
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
+ A G + A++ G V +G +LG +S F+ K G
Sbjct: 243 QDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASC--FIPQNLTSFKNSTKSWVGF- 299
Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGY 298
+ G H+ C+D G+ Y G ++ EG + P+LIS+LP V CG
Sbjct: 300 ----SGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPVVSSVACGAS 355
Query: 299 HTCVLTSGGELYTWGSNENGCLGIG 323
++ G ++ WG N LG G
Sbjct: 356 VGYAVSKDGRVFAWGMGTNYQLGTG 380
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 11/183 (6%)
Query: 81 AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
+H TE G V G D GQLG+ E++ +P + L ++VVQ G H+ +
Sbjct: 26 SHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVP-LLQDVVQAEAGGMHTVCLNQ 84
Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
G++Y +G N G LG +P KVE + Q + G + A+T G+V
Sbjct: 85 SGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVV--QVSAGDSHTAALTEDGRVFL 142
Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
W GS R +G ++G L + + +L+ VK+ A+G H + +G +Y
Sbjct: 143 W---GSFRDNNG----VIGLLEPMKKSMVPVQVQLDMPVVKV-ASGNDHLVMLTTDGDLY 194
Query: 261 IFG 263
G
Sbjct: 195 TLG 197
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 78 CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQISTGYHH 134
CG T ++ G VY GL+++ QLG + P ++ K K V S G HH
Sbjct: 247 CGAYLTFAISREGHVYGFGLSNYHQLG-TPGTASCFIPQNLTSFKNSTKSWVGFSGGQHH 305
Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
+ + +G+ Y G+ G+LGLG+ A+ IPT + L + + A G AV+
Sbjct: 306 TICMDSEGKAYSLGRAEYGRLGLGE-GAEEKSIPTLISRLPVVSS--VACGASVGYAVSK 362
Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
G+V +WG G + +LG GQ+ + T K+LE V ++G H+ +
Sbjct: 363 DGRVFAWGMGTNYQLGTGQDEDAWSPVEMTG-------KQLENRVVLTVSSGGQHTVLL 414
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA---LACGGAHTLFLTETGCVYATGLND 99
+G +Y +LG S + P ++F K+S K+ + G HT+ + G Y+ G +
Sbjct: 264 FGLSNYHQLGTPGTASCFIPQNLTSF-KNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAE 322
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G+LG+ E P IS L V ++ G A++ DG ++ WG +N QLG G+
Sbjct: 323 YGRLGLGEGAEEKSIPTLISRLPV-VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQ 381
Query: 160 KAAKVIPI 167
P+
Sbjct: 382 DEDAWSPV 389
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGG 297
KVK++ H + E G V G V ++ E R+ P+L+ L + GG
Sbjct: 22 KVKVS-----HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDVVQAEAGG 76
Query: 298 YHTCVLTSGGELYTWGSNENGCLG 321
HT L G++Y++G N+ G LG
Sbjct: 77 MHTVCLNQSGQVYSFGCNDEGALG 100
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 44 GNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
G +YGRLGLG E + P + S + ++ACG + +++ G V+A G+ Q
Sbjct: 319 GRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYAVSKDGRVFAWGMGTNYQ 376
Query: 103 LGISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGE 143
LG ++ + P+ ++G + E V+ +S+G H+ + D E
Sbjct: 377 LGTGQDED-AWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDKE 419
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 155/328 (47%), Gaps = 35/328 (10%)
Query: 17 DIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKA 75
D+K L I T+ + L G GD G+LGLG + R +P + + E +
Sbjct: 21 DVKKTKALPIVTHPSHGTVGGQVLTL-GQGDVGQLGLGEDIMERKKPALVTLTE--DIVQ 77
Query: 76 LACGGAHTLFLTETGCVYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQISTGYHH 134
A GG HT+ L +G +Y G ND G LG + G ++P ++ L ++VVQ+S G H
Sbjct: 78 AAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVE-LAEKVVQVSAGDSH 136
Query: 135 SSAITVDGELYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
++A+T DG ++++G +++NG +GL + K + +P +V+ + + + A G + V +
Sbjct: 137 TAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSM-VPVQVQINTPVI--KIASGNDHLVLL 193
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL---EGVKVKIAAAGFLH 249
T G + + G G G+LG E R T+ + ++ L + + +K +G +H
Sbjct: 194 TVDGDLYTSGCGEQGQLGRVPE-------RFTNRGGRKGLERLLVPQCIHLKAKGSGRVH 246
Query: 250 ----------SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE----VVC 295
+ + + G VY FG ++ + P ++ S +
Sbjct: 247 FQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSG 306
Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG 323
G +HT + S G+ Y+ G E G LG+G
Sbjct: 307 GQHHTVCVDSEGKAYSLGRAEYGRLGLG 334
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 32/301 (10%)
Query: 43 WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG--LN 98
+G D G LG + E S +P EK + ++ G +HT LTE G V+ G +
Sbjct: 97 FGCNDEGALGRDTSEEGSEMQPGKVELAEK--VVQVSAGDSHTAALTEDGRVFVFGSFRD 154
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL- 157
+ G +G+ E + S+ P+++ + V++I++G H +TVDG+LY G GQLG
Sbjct: 155 NNGVIGLLEPMKKSMVPVQVQ-INTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRV 213
Query: 158 --------GKKAAKVIPIPT----KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
G+K + + +P K + + + G + AV+ G V +G
Sbjct: 214 PERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSN 273
Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEG-VKVKIA-AAGFLHSACIDENGRVYIFG 263
+LG + Y P+ + + K I + G H+ C+D G+ Y G
Sbjct: 274 YHQLGTKNTQAC---------YAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLG 324
Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ L + P+ I LP V G + +++ G ++ WG N LG
Sbjct: 325 RAEYGRLGLGENAEEQSEPTPIPDLPKINSVASGASVSYAVSTDGCVFAWGMGTNLQLGT 384
Query: 323 G 323
G
Sbjct: 385 G 385
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 73 LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK---KEVVQIS 129
+ + CG T +++ G VY GL+++ QLG ++N P ++ K K + S
Sbjct: 247 FQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLG-TKNTQACYAPQNLTSFKNSTKSWIGFS 305
Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
G HH+ + +G+ Y G+ G+LGLG+ A + PT + L I A G S
Sbjct: 306 GGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSE-PTPIPDLPKI--NSVASGASVS 362
Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI--KELEGVKVKIAAAGF 247
AV+ G V +WG G + +LG G+E + ++P + K LE +V ++G
Sbjct: 363 YAVSTDGCVFAWGMGTNLQLGTGEEEDV---------WSPEQMTGKHLEDREVLSVSSGG 413
Query: 248 LHSACI 253
H+ +
Sbjct: 414 QHTVLL 419
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA---LACGGAHTLFLTETGCVYATGLND 99
+G +Y +LG + ++ + P ++F K+S K+ + G HT+ + G Y+ G +
Sbjct: 269 FGLSNYHQLGTKNTQACYAPQNLTSF-KNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAE 327
Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
+G+LG+ EN EP I L K + +++G S A++ DG ++ WG +N QLG G+
Sbjct: 328 YGRLGLGENAEEQSEPTPIPDLPK-INSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGE 386
Query: 160 K 160
+
Sbjct: 387 E 387
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 43 WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
WGNG +LG +E R + + F +K +A G H LT+ + + GLN FG
Sbjct: 245 WGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFG 304
Query: 102 QLGISENI---GYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
Q G+SE++ +P R++ V++ I+ G HHS ++ DG+LY G+ ++G+
Sbjct: 305 QCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGI 364
Query: 158 GKK------------AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
K A+ +P+PTK+ + K A G SVAV G SWG G
Sbjct: 365 PKDNLPEYTYKDVHGKARAVPLPTKLNNVPKF--KSVAAGSHHSVAVAQNGIAYSWGFGE 422
Query: 206 SGRLGHG 212
+ +G G
Sbjct: 423 TYAVGLG 429
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 129/315 (40%), Gaps = 54/315 (17%)
Query: 43 WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGL 97
WG G LGLG L RP + + K + A GG HTL L E V++ G
Sbjct: 51 WGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGC 110
Query: 98 NDFGQLG-ISENIGYSLE---------------------PLRIS-------GLKKEVVQI 128
ND G LG + N L+ P +I +VVQ+
Sbjct: 111 NDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQL 170
Query: 129 STGYHHSSAITVDGELYMWG--KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
+ + S A+ +GE+Y WG + + G LG + K+ P KV S Q A G
Sbjct: 171 AATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGK 230
Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+ + + G V +WG G +LG + F T + P ++ VK A+G
Sbjct: 231 DHILFLDEEGMVFAWGNGQQNQLG---RKVMERFRLKTLDPRPFGLRH-----VKYIASG 282
Query: 247 FLHSACIDENGRVY-----IFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGY 298
H + ++ ++ FG V + + ++G +P ++ LP + + G +
Sbjct: 283 ENHCFALTKDNKLVSWGLNQFGQCGVSEDV-EDGALVTKPKRLA-LPDNVVIRSIAAGEH 340
Query: 299 HTCVLTSGGELYTWG 313
H+ +L+ G+LY+ G
Sbjct: 341 HSLILSQDGDLYSCG 355
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 62 PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RIS 119
P F K+++ LA G H LFL E G V+A G QLG + L+ L R
Sbjct: 212 PWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPF 271
Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK--VIPIPTKVECLSGI 177
GL + V I++G +H A+T D +L WG N GQ G+ + ++ P ++ +
Sbjct: 272 GL-RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNV 330
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES-------SILGFLRSTSEYTPR 230
+ A G S+ ++ G + S G +G +++ + G R+
Sbjct: 331 VIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVP----- 385
Query: 231 LIKELEGV-KVKIAAAGFLHSACIDENGRVYIFG 263
L +L V K K AAG HS + +NG Y +G
Sbjct: 386 LPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWG 419
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 30/294 (10%)
Query: 53 LGSLESRWRPVVCSAF----EKHSLKALACGGAHTLFLTETGCVYATGLN--DFGQLGIS 106
L LES + +F E H + LA + L G VYA G + G LG
Sbjct: 143 LNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFY 202
Query: 107 EN-IGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
++ I P ++ K +VQ++ G H + +G ++ WG QLG +K +
Sbjct: 203 QDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLG--RKVMER 260
Query: 165 IPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
+ T G+ K A G A+T K++SWG G+ G ++ +
Sbjct: 261 FRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTK 320
Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN------- 276
P+ + + V ++ AAG HS + ++G +Y G + ++ + N
Sbjct: 321 -----PKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYK 375
Query: 277 --HARR-----PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
H + P+ ++ +P + V G +H+ + G Y+WG E +G+G
Sbjct: 376 DVHGKARAVPLPTKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLG 429
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 279 RRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG 321
+RP L LP E + GG HT L +++WG N+ G LG
Sbjct: 71 KRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALG 117
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 84/230 (36%), Gaps = 37/230 (16%)
Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-------KAAKVIPIPTKVECLSGI 177
++ Y H +++ WG S +LGLG K ++ P + E
Sbjct: 29 IINAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIIS 88
Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS------------------ILG 219
F A+G ++A+ V SWG G LG ++ L
Sbjct: 89 F----AVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLN 144
Query: 220 FLRSTSEYTPR--LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-RAVDKMLFQEGN 276
L ST PR EG KV AA S + NG VY +G R + +L +
Sbjct: 145 ELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQD 204
Query: 277 HARRPSLISKLP-YSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ K+P +S+ ++ G H L G ++ WG+ + LG
Sbjct: 205 KIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLG 254
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 90/183 (49%), Gaps = 17/183 (9%)
Query: 44 GNGDYGRLGLGS--LE-SRWRPV--VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
GNGD G+LGLG LE R PV + A + ++ GG H L LT++G +Y+ G N
Sbjct: 48 GNGDVGQLGLGEDILERKRLSPVAGIPDAVD------ISAGGMHNLVLTKSGDIYSFGCN 101
Query: 99 DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLG 156
D G LG + S + L + + IS G HS+ + DG ++ WG ++S+G +G
Sbjct: 102 DEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMG 161
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
L K PI + + G A G + V +T GKV + G G+LG E S
Sbjct: 162 LTIDGNKRTPI----DLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERS 217
Query: 217 ILG 219
I G
Sbjct: 218 ISG 220
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 87 TETGCVYATGLNDFGQLGISENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
++T ++ATGLN+F QL E G ++L P++ K++ I+ G HH+ +T D +
Sbjct: 258 SQTQVIWATGLNNFKQLA-HETKGKEFALTPIKTE--LKDIRHIAGGQHHTVILTTDLKC 314
Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ G+ G+LGLG V+ PT V+ L+ G S AVT GK+ SWG+G
Sbjct: 315 SVVGRPEYGRLGLGD-VKDVVEKPTIVKKLTEKIV-SVGCGEVCSYAVTIDGKLYSWGSG 372
Query: 205 GSGRLGHGQ 213
+ +LG G
Sbjct: 373 VNNQLGVGD 381
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 28/192 (14%)
Query: 139 TVDGELYMWGKNSNGQLGLG------KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
TV G + + G GQLGLG K+ + V IP V+ +G ++ +
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDAVDISAGGM---------HNLVL 89
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
T G + S+G G LG +++S G SE P LI +L G K +AG HSAC
Sbjct: 90 TKSGDIYSFGCNDEGALG--RDTSEDG-----SESKPDLI-DLPG-KALCISAGDSHSAC 140
Query: 253 IDENGRVYIFG---DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
+ E+GRV+ +G D + L +GN R P + + + G H +LT+ G++
Sbjct: 141 LLEDGRVFAWGSFRDSHGNMGLTIDGNK-RTPIDLMEGTVCCSIASGADHLVILTTAGKV 199
Query: 310 YTWGSNENGCLG 321
+T G E G LG
Sbjct: 200 FTVGCAEQGQLG 211
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 69 EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
E ++ +A G HT+ LT G ++G+LG+ + +P + L +++V +
Sbjct: 291 ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSV 350
Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
G S A+T+DG+LY WG N QLG+G ++ PI
Sbjct: 351 GCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPI 389
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 90 GCVYATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMW 147
G V G D GQLG+ E+I LE R+S + + V IS G H+ +T G++Y +
Sbjct: 42 GNVLVCGNGDVGQLGLGEDI---LERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSF 98
Query: 148 GKNSNGQLGLG------KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
G N G LG + +I +P K C+S G S + G+V +W
Sbjct: 99 GCNDEGALGRDTSEDGSESKPDLIDLPGKALCISA--------GDSHSACLLEDGRVFAW 150
Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
GS R HG +G ++ TP I +EG A+G H + G+V+
Sbjct: 151 ---GSFRDSHGN----MGLTIDGNKRTP--IDLMEGTVCCSIASGADHLVILTTAGKVFT 201
Query: 262 FG 263
G
Sbjct: 202 VG 203
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
+P+++ KL +E++V CG + +T G+LY+WGS N LG+G
Sbjct: 336 KPTIVKKL--TEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVG 380
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 87/200 (43%), Gaps = 50/200 (25%)
Query: 162 AKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A V P P + L+ + +Q LG E + + G+V SWGAG G+LGHG
Sbjct: 145 AYVTPEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGT------- 197
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ----EGN 276
+E PRL++ L+G+++ AAG HS C+ E G +YI+G ++ N
Sbjct: 198 --LEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTEN 255
Query: 277 HARR--------------------------------PSLISKLPYSEEVV---CGGYHTC 301
A R P+L+ LP + V CG HT
Sbjct: 256 KAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLD-LPLGSDAVMASCGSRHTA 314
Query: 302 VLTSGGELYTWGSNENGCLG 321
V+T GELYTWG + G LG
Sbjct: 315 VVTRTGELYTWGWGKYGQLG 334
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 36/150 (24%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ L+ETG +Y G N+ GQ
Sbjct: 185 WGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQ 244
Query: 103 LGI-----SENIGYSLEPLRIS--GLKKEV-----------------------------V 126
L + +EN E ++ GLK+E+ V
Sbjct: 245 LALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAV 304
Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
S G H++ +T GELY WG GQLG
Sbjct: 305 MASCGSRHTAVVTRTGELYTWGWGKYGQLG 334
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 76/193 (39%), Gaps = 37/193 (19%)
Query: 61 RPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
P C ++ L G H L L G V++ G GQLG + LEP +
Sbjct: 150 EPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHG-TLEAELEPRLLE 208
Query: 120 GLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA---------------- 162
L+ + +++ G HS ++ G++Y+WG N +GQL L ++
Sbjct: 209 ALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNED 268
Query: 163 ------------------KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
+ P P ++ G A+ G + VT G++ +WG G
Sbjct: 269 GLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWG 328
Query: 205 GSGRLGHGQESSI 217
G+LGH +S+
Sbjct: 329 KYGQLGHKDSTSL 341
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Query: 74 KALACGGAHTLFLTETGCVYATGLNDFGQLGIS------ENIGY-------SLEPLRISG 120
+ + CG ++ LT G V A G N F +LG+ E + Y S PL +
Sbjct: 504 QRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAP 563
Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
L +E ++ + G HS+AIT G+ Y +G N +GQLG + +V P +V+ L GI
Sbjct: 564 LDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSR--RVSRAPCRVQGLEGIKM 621
Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
A G +VAV G+V SWG G GRLG E + L E P ++
Sbjct: 622 VMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMV 674
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 117/264 (44%), Gaps = 23/264 (8%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
++K +ACG T LT+ G + G G LG S + + L E+VQ++ G
Sbjct: 398 TIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACG 457
Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
H A++ DGEL+ WG+ G+LGLG + + P +V G ++ G + S+
Sbjct: 458 ASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCP--QQVPVAPGQEAQRVVCGIDSSMI 515
Query: 192 VTGGGKVLSWGAGGSGRLG--H---GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
+T G+VL+ G+ +LG H +E + +TP L+ + G
Sbjct: 516 LTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLG 575
Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---------VVCGG 297
HSA I +G Y FG ++ G +RR +S+ P + V CG
Sbjct: 576 TAHSAAITASGDCYTFGSNQHGQL----GTSSRR---VSRAPCRVQGLEGIKMVMVACGD 628
Query: 298 YHTCVLTSGGELYTWGSNENGCLG 321
T + + GE+Y+WG G LG
Sbjct: 629 AFTVAVGAEGEVYSWGKGTRGRLG 652
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 22/218 (10%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG----KKAAKVIPIPTK 170
PLR+ L EVVQ++ G + +T G L +W LG G A +P P
Sbjct: 330 PLRLPMLNTEVVQVAAGRTQKAGVTRSGRLILW---EAPPLGAGGGTLLPGAVELPQPQF 386
Query: 171 V----ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
V E SG+ K A G + +T G ++++G+G +G LGHG + I
Sbjct: 387 VSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDI--------- 437
Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
P +++ L G ++ A G H + +G ++ +G ++ P +
Sbjct: 438 SQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPV 497
Query: 287 LP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P ++ VVCG + +LTS G + GSN LG+
Sbjct: 498 APGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGL 535
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG GD GRLGL + +S P S + + CG ++ ++ + A G N F +
Sbjct: 474 WGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNK 533
Query: 103 LGISENIGYSLEPLRISGLKK---------------EVVQISTGYHHSSAITVDGELYMW 147
LG+ + G EP +++ ++V I G HS A+T G+ + +
Sbjct: 534 LGLDKVSGTE-EPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTF 592
Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
G N +GQLG + + +P +V L GI AA G ++A+ G+V +WG G G
Sbjct: 593 GSNQHGQLGCSHRRSSRVPY--QVSGLQGI--TMAACGDAFTLAIGAEGEVYTWGKGARG 648
Query: 208 RLGHGQES 215
RLG +E
Sbjct: 649 RLGRKEED 656
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 9/256 (3%)
Query: 72 SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQIST 130
++K+++CG T LT+ G + G G LG N +P + L E+VQ+S
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLG-HGNFNDVTQPKIVEALLGYELVQVSC 457
Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
G H A+T + E++ WG+ NG+LGL + + P +V + ++ G + S+
Sbjct: 458 GASHVLAVTNEREVFSWGRGDNGRLGLATQDSH--NCPQQVSLPADFEAQRVLCGVDCSM 515
Query: 191 AVTGGGKVLSWGAGGSGRLGHGQES---SILGFLRSTSEYTPRLIK--ELEGVKVKIAAA 245
++ ++L+ G +LG + S F + + +L++ L K+
Sbjct: 516 IMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDI 575
Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
G HS + E G+ + FG ++ +R P +S L CG T + +
Sbjct: 576 GTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGITMAACGDAFTLAIGA 635
Query: 306 GGELYTWGSNENGCLG 321
GE+YTWG G LG
Sbjct: 636 EGEVYTWGKGARGRLG 651
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 20/182 (10%)
Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
+Y WG + L L +VI Q +LG Q + VT G++++W A
Sbjct: 322 VYTWGSGISTPLRLPMLNTEVI---------------QVSLGRTQKMGVTKSGRLITWEA 366
Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
+G G+ + + ++ R ++ GV +K + G L + C+ + G + FG
Sbjct: 367 PS---VGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFG 423
Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
+ + N +P ++ L E +V CG H +T+ E+++WG +NG LG
Sbjct: 424 SGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLG 483
Query: 322 IG 323
+
Sbjct: 484 LA 485
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 17/215 (7%)
Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIP--IPTK 170
PLR+ L EV+Q+S G +T G L W S +G+ L ++ P I
Sbjct: 332 PLRLPMLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRF 391
Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
+E SG+ K + G + +T G ++++G+G +G LGHG + + P+
Sbjct: 392 LEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDV---------TQPK 442
Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY- 289
+++ L G ++ + G H + V+ +G ++ + P +S LP
Sbjct: 443 IVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVS-LPAD 501
Query: 290 --SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
++ V+CG + ++++ ++ G+N LG+
Sbjct: 502 FEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGL 536
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 25/234 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
+G+G G LG G+ +P + A + L ++CG +H L +T V++ G D G+
Sbjct: 422 FGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGR 481
Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
LG++ ++ P ++S E ++ G S ++ ++ G N +LGL K +
Sbjct: 482 LGLATQDSHNC-PQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVS 540
Query: 162 AKVIPIP-TKVECLSGIFTKQAA-----------LGFEQSVAVTGGGKVLSWGAGGSGRL 209
P +VE + Q+A +G SVAVT G+ ++G+ G+L
Sbjct: 541 GTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQL 600
Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
G S P + L+G + +AA G + I G VY +G
Sbjct: 601 GCSHRR---------SSRVPYQVSGLQG--ITMAACGDAFTLAIGAEGEVYTWG 643
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 52/202 (25%)
Query: 162 AKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
A V P P L+ + +Q LG E ++ + G+V SWG G G+LGHG
Sbjct: 142 AYVSPRPPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT------- 194
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---------- 270
+E PRL++ L+G+ + AAG HS C+ E G +YI+G ++
Sbjct: 195 --LEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAED 252
Query: 271 ----------LFQEGNHARR------------------PSLISKLPYSEEVV---CGGYH 299
L ++G+ +R P+L+ LP + V CG H
Sbjct: 253 GETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLD-LPLGSDAVKVSCGSRH 311
Query: 300 TCVLTSGGELYTWGSNENGCLG 321
T V+T GELYTWG + G LG
Sbjct: 312 TAVVTRTGELYTWGWGKYGQLG 333
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 21/193 (10%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + ++ +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 182 WGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P R E V ++ + DG G++ G A
Sbjct: 242 LAL---------PTRNLAEDGETVA-----REATGLNEDGSQV----KRTGRVEDGAPAP 283
Query: 163 --KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
V P P ++ G + + G + VT G++ +WG G G+LGH ++++ L +
Sbjct: 284 FIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGH-EDTTSLDW 342
Query: 221 LRSTSEYTPRLIK 233
R + + ++
Sbjct: 343 PRRVEYFVDKQLQ 355
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 51/186 (27%)
Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
+ +Q LG E ++ + G+V SWG G G+LGHG +E PRL++ L+
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGT---------LEAELEPRLLEALQ 208
Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFG------------DRAVD--------KMLFQEGN 276
G+ + AAG HS C+ E G +YI+G + A D L ++G+
Sbjct: 209 GLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGS 268
Query: 277 HARR------------------PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
+R P+L+ LP + V CG HT V+T GELYTWG
Sbjct: 269 QVKRTGGAEDGAPAPFIAVQPFPALLD-LPMGSDAVKASCGSRHTAVVTRTGELYTWGWG 327
Query: 316 ENGCLG 321
+ G LG
Sbjct: 328 KYGQLG 333
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
WG G +G+LG G+LE+ P + A + + +A GG H++ ++ETG +Y G N+ GQ
Sbjct: 182 WGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQ 241
Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
L + P R E V ++ + DG + + G
Sbjct: 242 LAL---------PTRNLAEDGETVA-----REATELNEDGSQVK--RTGGAEDGAPAPFI 285
Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
V P P ++ G +A+ G + VT G++ +WG G G+LGH +S+
Sbjct: 286 AVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSL 340
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 21/224 (9%)
Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA------AKV 164
+S PLR +G+ ++ ++S + +++ +T G L + G +++G G K A V
Sbjct: 30 HSPSPLR-AGV--DICRVSASWSYTAFVTRGGRLELSG-SASGAAGRCKDAWASEGLLAV 85
Query: 165 IPIPTKVECLSGIFTKQAALGFE----QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
+ E L ++ ++AL E Q+V G+ G +GRL +
Sbjct: 86 LRAGPGPEALLQVWAAESALRGEPLWAQNVVPEAEGEDDPAGEAQAGRLP--LLPCARAY 143
Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
+ + + L EL ++++ A H+ +D G+V+ +G ++
Sbjct: 144 VSPRAPFYRPLAPELRARQLELGAE---HALLLDAAGQVFSWGGGRHGQLGHGTLEAELE 200
Query: 281 PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
P L+ L EV GG+H+ ++ G++Y WG NE+G L +
Sbjct: 201 PRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL 244
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
T ++Y WG N+N LG G + +K P + SGI+ KQ L SV ++ G+V
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQV 198
Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
+ G G GRLGHG E + L PRL++ L G AA H+ + E+G
Sbjct: 199 YTCGHGPGGRLGHGDEQTCL---------VPRLVEGLNGHNCSQVAAAKDHTVVLTEDGC 249
Query: 259 VYIFG 263
VY FG
Sbjct: 250 VYTFG 254
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 44 GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
G+G GRLG G ++ P + H+ +A HT+ LTE GCVY GLN F QL
Sbjct: 202 GHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQL 261
Query: 104 GI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
GI S N+ ++ + G + ++ ++ G H+ T + +Y G N GQLG
Sbjct: 262 GIIPPPSSCNVPRQIQAKYLKG--RTIIGVAAGRFHTVLWTREA-VYTMGLN-GGQLGCL 317
Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
L K + P +V S + K AL VA + G V
Sbjct: 318 LDPNGEKCVTAPRQV---SALHHKDIALSL---VAASDGATV 353
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 14/240 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG GS S+ P + F + + K + H++FL++ G VY G
Sbjct: 147 WGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPG 206
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + L P + GL Q++ H+ +T DG +Y +G N QLG+
Sbjct: 207 GRLGHGDE-QTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIP 265
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+ +P + + L G A G +V T V + G G GQ +L
Sbjct: 266 PPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG------GQLGCLL 318
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
PR + L + + + + AA + C+ G +Y+ D KM ++ N
Sbjct: 319 DPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKKMASKQLN 378
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHS 250
T V +WG + LGHG ++S ++ P L+ G+ +K HS
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNS---------KHHPELVDLFSRSGIYIKQVVLCKFHS 189
Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
+ + G+VY G ++ + P L+ L +V HT VLT G
Sbjct: 190 VFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGC 249
Query: 309 LYTWGSNENGCLGI 322
+YT+G N LGI
Sbjct: 250 VYTFGLNIFHQLGI 263
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 81/184 (44%), Gaps = 27/184 (14%)
Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
ELY WG N N LG G + +K P ++ SG++ KQ L SV ++ G+V + G
Sbjct: 144 ELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCG 203
Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
G GRLGHG E + L PRL++ L G A H+ + E+G VY F
Sbjct: 204 HGQGGRLGHGDELTCL---------VPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTF 254
Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEE-----------VVCGGYHTCVLTSGGELYT 311
G ++ Q P S +P + V G +HT VL + +YT
Sbjct: 255 GLNTFHQLGIQP------PPPNSNVPRQIQAKTMKGKTVLGVAAGRFHT-VLWTKDAVYT 307
Query: 312 WGSN 315
G N
Sbjct: 308 VGLN 311
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 14/240 (5%)
Query: 43 WGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLNDF 100
WG+ LG G+ +S+ P + F + +K + H++FL++ G VY G
Sbjct: 148 WGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQG 207
Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
G+LG + + L P + GL+ Q++ H+ +T DG +Y +G N+ QLG+
Sbjct: 208 GRLGHGDELT-CLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQP 266
Query: 160 KAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
+P + + + G A G +V T V + G G G+LG+ Q+ +
Sbjct: 267 PPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNG-GQLGYLQDPNGE 324
Query: 219 GFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
F+ PR + L + + + + +A + C+ E G +Y+ + K+ ++ N
Sbjct: 325 KFVS-----CPRQVSALHHKDINITLVSASDGATVCVSERGDIYLLSEYQCKKLASKQLN 379
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE--GVKVKIAAAGFLHSACID 254
++ +WG + LGHG + S ++ P L++ GV +K HS +
Sbjct: 144 ELYTWGDNVNFTLGHGTQQS---------KHHPELVEMFPRSGVYIKQMVLCKFHSVFLS 194
Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYT 311
+ G+VY G ++ + P L+ L P ++ V HT VLT G +YT
Sbjct: 195 QKGQVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHPCTQ-VAGAKDHTVVLTEDGYVYT 253
Query: 312 WGSNENGCLGI 322
+G N LGI
Sbjct: 254 FGLNTFHQLGI 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,329,528
Number of Sequences: 539616
Number of extensions: 5596991
Number of successful extensions: 15962
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 14282
Number of HSP's gapped (non-prelim): 541
length of query: 323
length of database: 191,569,459
effective HSP length: 117
effective length of query: 206
effective length of database: 128,434,387
effective search space: 26457483722
effective search space used: 26457483722
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)