BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020663
(323 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|B Chain B, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|C Chain C, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|D Chain D, Crystal Structure Of The C-C Bond Hydrolase Mhpc
Length = 289
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 34/73 (46%)
Query: 235 KMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKV 294
K P RL EI LIV G DR VP RL I GS + ++CGH Q E
Sbjct: 216 KQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHA 275
Query: 295 EEFVSIVARFLQR 307
+ F +V FL R
Sbjct: 276 DAFNQLVLNFLAR 288
>pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2OG1|B Chain B, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2PU5|A Chain A, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
pdb|2PU5|B Chain B, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 302
RL EI I G DR VP + +L I + V CGH Q E +EF +V
Sbjct: 221 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI 280
Query: 303 RFLQRA 308
FL+ A
Sbjct: 281 DFLRHA 286
>pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3-Cl Hopda
pdb|2RHW|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3,10-Di-Fluoro Hopda
pdb|2RI6|A Chain A, Crystal Structure Of S112a Mutant Of A C-C Hydrolase, Bphd
From Burkholderia Xenovorans Lb400
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 302
RL EI I G DR VP + +L I + V CGH Q E +EF +V
Sbjct: 218 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI 277
Query: 303 RFLQRA 308
FL+ A
Sbjct: 278 DFLRHA 283
>pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
Its Substrate Hopda
Length = 286
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 302
RL EI I G DR VP + +L I + V CGH Q E +EF +V
Sbjct: 221 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI 280
Query: 303 RFLQRA 308
FL+ A
Sbjct: 281 DFLRHA 286
>pdb|2WUD|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUD|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUE|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUE|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUF|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUF|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUG|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
pdb|2WUG|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
Length = 291
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIV 301
+ ++ + PVL++ G DR+ P A + IP + V CGH Q EK +EF +
Sbjct: 224 REVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLT 283
Query: 302 ARFL 305
FL
Sbjct: 284 IEFL 287
>pdb|2VF2|A Chain A, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
pdb|2VF2|B Chain B, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
Length = 311
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIV 301
+ ++ + PVL++ G DR+ P A + IP + V CGH Q EK +EF +
Sbjct: 244 REVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLT 303
Query: 302 ARFL 305
FL
Sbjct: 304 IEFL 307
>pdb|3NWO|A Chain A, Crystal Structure Of Proline Iminopeptidase Mycobacterium
Smegmatis
Length = 330
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 242 KRLHEISCPVLIVTGDTDRIVP-SWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSI 300
RL +++ PVL++ G+ D P +W + IP V H EK EEF ++
Sbjct: 257 DRLPDVTAPVLVIAGEHDEATPKTW--QPFVDHIPDVRSHVFPGTSHCTHLEKPEEFRAV 314
Query: 301 VARFLQR 307
VA+FL +
Sbjct: 315 VAQFLHQ 321
>pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant
Length = 254
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
L + CP LIV G+ D +VP ++A+ + + + GS ++ H +EF +
Sbjct: 192 LPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAED 251
Query: 304 FLQ 306
FLQ
Sbjct: 252 FLQ 254
>pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase
pdb|2OCI|A Chain A, Crystal Structure Of Valacyclovir Hydrolase Complexed With
A Product Analogue
Length = 254
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
L + CP LIV G+ D +VP ++A+ + + + GS ++ H +EF +
Sbjct: 192 LPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAED 251
Query: 304 FLQ 306
FLQ
Sbjct: 252 FLQ 254
>pdb|2OCL|A Chain A, Crystal Structure Of Valacyclovir Hydrolase S122a Mutant
Length = 254
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
L + CP LIV G+ D +VP ++A+ + + + GS ++ H +EF +
Sbjct: 192 LPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAED 251
Query: 304 FLQ 306
FLQ
Sbjct: 252 FLQ 254
>pdb|2XMZ|A Chain A, Structure Of Menh From S. Aureus
Length = 269
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 226 AALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNC 285
A L D + P L RL EI P LI+ G+ D A++++ IP S ++I
Sbjct: 185 AKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQI-AKKMANLIPNSKCKLISAT 243
Query: 286 GHVPQEEKVEEFVSIVARFLQR 307
GH E +EF +++ FL+
Sbjct: 244 GHTIHVEDSDEFDTMILGFLKE 265
>pdb|3V1L|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400
pdb|3V1M|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400,
After Exposure To Its Substrate Hopda
Length = 286
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 302
RL EI I G DR VP + +L I + V CG Q E +EF +V
Sbjct: 221 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGQWAQWEHADEFNRLVI 280
Query: 303 RFLQRA 308
FL+ A
Sbjct: 281 DFLRHA 286
>pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1K|B Chain B, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1N|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, After Exposure
To Its Substrate Hopda
Length = 286
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 302
RL EI I G DR VP + +L I + V CG Q E +EF +V
Sbjct: 221 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGQWAQWEHADEFNRLVI 280
Query: 303 RFLQRA 308
FL+ A
Sbjct: 281 DFLRHA 286
>pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase
(Np_393672.1) From Thermoplasma Acidophilum At 1.45 A
Resolution
Length = 207
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 246 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFL 305
+I L+V G D +VP ++ + I GS E+++ GH EK EEFV I FL
Sbjct: 145 KIRQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITVDFL 204
Query: 306 Q 306
+
Sbjct: 205 R 205
>pdb|2PU7|A Chain A, Crystal Structure Of S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd, From Burkholderia Xenovorans Lb400
pdb|2PUJ|A Chain A, Crystal Structure Of The S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In
Complex With Its Substrate Hopda
Length = 286
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 302
RL EI I G DR VP + +L I + V CG Q E +EF +V
Sbjct: 221 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVI 280
Query: 303 RFLQRA 308
FL+ A
Sbjct: 281 DFLRHA 286
>pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase
Involved In The Carbazole Degradation (Carc Enzyme)
Length = 296
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
+ ++ P L+V G D++VP A + I S +I +CGH E E+F +
Sbjct: 218 IRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLS 277
Query: 304 FL 305
FL
Sbjct: 278 FL 279
>pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUN|B Chain B, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUO|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Acetates
pdb|1IUP|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Isobutyrates
pdb|1UK6|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Propionate
pdb|1UK7|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With N-Butyrate
pdb|1UK8|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With N-valerate
pdb|1UK9|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Isovalerate
pdb|1UKA|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With (S)-2-Methylbutyrate
pdb|1UKB|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With Benzoate
Length = 282
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 251 VLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308
LI+ G D++VP ++ RL I + V CGH Q E+ + F +V F A
Sbjct: 216 TLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEA 273
>pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) A129v Mutant
Length = 282
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 252 LIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308
LI+ G D++VP ++ RL I + V CGH Q E+ + F +V F A
Sbjct: 217 LIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEA 273
>pdb|3FOB|A Chain A, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|B Chain B, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|C Chain C, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
Length = 281
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 242 KRLHEISCPVLIVTGDTDRIVP-SWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSI 300
K L + + P LI+ GD+D VP ++ + AIP S +IK H +EF
Sbjct: 215 KDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEA 274
Query: 301 VARFLQ 306
+ FL+
Sbjct: 275 LLLFLK 280
>pdb|3RM3|A Chain A, Crystal Structure Of Monoacylglycerol Lipase From Bacillus
Sp. H257
pdb|3RLI|A Chain A, Crystal Structure Of Monoacylglycerol Lipase From Bacillus
Sp. H257 In Complex With Pmsf
Length = 270
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVI--KNCGHV 288
+L I CP LI D D +VP NA+ + + I + E++ +N HV
Sbjct: 200 KLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHV 247
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 233 ESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERL-SRAIPGSTFEVIKNCGHVPQE 291
E+ P +AK I P L++ GD D+IVP ++ + I G+ +V K+ H
Sbjct: 200 ETDFRPDMAK----IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV 255
Query: 292 EKVEEFVSIVARFLQRA 308
++ + FL+R
Sbjct: 256 THAQQLNEDLLAFLKRG 272
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 233 ESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERL-SRAIPGSTFEVIKNCGHVPQE 291
E+ P +AK I P L++ GD D+IVP ++ + I G+ +V K+ H
Sbjct: 200 ETDFRPDMAK----IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV 255
Query: 292 EKVEEFVSIVARFLQR 307
++ + FL+R
Sbjct: 256 THAQQLNEDLLAFLKR 271
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 233 ESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERL-SRAIPGSTFEVIKNCGHVPQE 291
E+ P +AK I P L++ GD D+IVP ++ + I G+ +V K+ H
Sbjct: 200 ETDFRPDMAK----IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV 255
Query: 292 EKVEEFVSIVARFLQR 307
++ + FL+R
Sbjct: 256 THAQQLNEDLLAFLKR 271
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 233 ESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERL-SRAIPGSTFEVIKNCGHVPQE 291
E+ P +AK I P L++ GD D+IVP ++ + I G+ +V K+ H
Sbjct: 200 ETDFRPDMAK----IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV 255
Query: 292 EKVEEFVSIVARFLQR 307
++ + FL+R
Sbjct: 256 THAQQLNEDLLAFLKR 271
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 233 ESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERL-SRAIPGSTFEVIKNCGHVPQE 291
E+ P +AK I P L++ GD D+IVP ++ + I G+ +V K+ H
Sbjct: 200 ETDFRPDMAK----IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV 255
Query: 292 EKVEEFVSIVARFLQR 307
++ + FL+R
Sbjct: 256 THAQQLNEDLLAFLKR 271
>pdb|1Q0R|A Chain A, Crystal Structure Of Aclacinomycin Methylesterase (Rdmc)
With Bound Product Analogue, 10-
Decarboxymethylaclacinomycin T (Dcmat)
pdb|1Q0Z|A Chain A, Crystal Structure Of Aclacinomycin Methylesterase (rdmc)
With Bound Product Analogue, 10-
Decarboxymethylaclacinomycin A (dcma)
Length = 298
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 238 PPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHV 288
P A L E++ P L++ + D I P+ + + L+ IP + I GH
Sbjct: 227 PSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGHA 277
>pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CQZ|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CR6|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1CR6|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1EK1|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK1|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK2|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
pdb|1EK2|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
Length = 554
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 245 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARF 304
+I P L+VT + D ++ ++ + + IP I++CGH Q EK E I+ ++
Sbjct: 481 RKILVPALMVTAEKDIVLRPEMSKNMEKWIPFLKRGHIEDCGHWTQIEKPTEVNQILIKW 540
Query: 305 LQ 306
LQ
Sbjct: 541 LQ 542
>pdb|1WOM|A Chain A, Crystal Structure Of Rsbq
pdb|1WOM|B Chain B, Crystal Structure Of Rsbq
pdb|1WPR|A Chain A, Crystal Structure Of Rsbq Inhibited By Pmsf
pdb|1WPR|B Chain B, Crystal Structure Of Rsbq Inhibited By Pmsf
Length = 271
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/65 (21%), Positives = 34/65 (52%)
Query: 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIV 301
+ L +++ P LI+ D I P+ + + + +P S+ + ++ GH P +E + ++
Sbjct: 204 EDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLI 263
Query: 302 ARFLQ 306
+L+
Sbjct: 264 GDYLK 268
>pdb|2R11|A Chain A, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|B Chain B, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|C Chain C, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|D Chain D, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
Length = 306
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 242 KRLHEISCPVLIVTGDTDRIVPSWNA-ERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSI 300
+ L P+L++ G+ + I +A R S +P EVIKN GHV E+
Sbjct: 240 EELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSXEQPTYVNER 299
Query: 301 VARFLQ 306
V RF
Sbjct: 300 VXRFFN 305
>pdb|3V48|A Chain A, Crystal Structure Of The Putative AlphaBETA HYDROLASE RUTD
FROM E.Coli
pdb|3V48|B Chain B, Crystal Structure Of The Putative AlphaBETA HYDROLASE RUTD
FROM E.Coli
Length = 268
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 247 ISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEF 297
I CPV I+ D +VP+ + L A+P S V GH E F
Sbjct: 199 IRCPVQIICASDDLLVPTACSSELHAALPDSQKXVXPYGGHACNVTDPETF 249
>pdb|1ZOI|A Chain A, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|B Chain B, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|C Chain C, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
Length = 276
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 240 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLS-RAIPGSTFEVIKNCGH 287
+ L I PVL++ GD D+IVP N+ LS + +P + K H
Sbjct: 208 FTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPH 256
>pdb|1A8Q|A Chain A, Bromoperoxidase A1
Length = 274
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 240 LAKRLHEISCPVLIVTGDTDRIVP-SWNAERLSRAIPGSTFEVIKNCGH----VPQEEKV 294
+ L + P L+V GD D++VP + ++ IP + +V + H VP ++
Sbjct: 204 FTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDK-- 261
Query: 295 EEFVSIVARFLQR 307
E+F + FL +
Sbjct: 262 EKFNRDLLEFLNK 274
>pdb|3E3A|A Chain A, The Structure Of Rv0554 From Mycobacterium Tuberculosis
pdb|3E3A|B Chain B, The Structure Of Rv0554 From Mycobacterium Tuberculosis
pdb|3HSS|A Chain A, A Higher Resolution Structure Of Rv0554 From Mycobacterium
Tuberculosis Complexed With Malonic Acid
pdb|3HSS|B Chain B, A Higher Resolution Structure Of Rv0554 From Mycobacterium
Tuberculosis Complexed With Malonic Acid
pdb|3HYS|A Chain A, Structure Of Rv0554 From Mycobacterium Tuberculosis
Complexed With Malonic Acid
pdb|3HYS|B Chain B, Structure Of Rv0554 From Mycobacterium Tuberculosis
Complexed With Malonic Acid
pdb|3HZO|A Chain A, Rv0554 From Mycobacterium Tuberculosis - The Structure
Solved From The Tetragonal Crystal Form
pdb|3HZO|B Chain B, Rv0554 From Mycobacterium Tuberculosis - The Structure
Solved From The Tetragonal Crystal Form
Length = 293
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 239 PLAKRL---HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVE 295
P RL I+ PVL++ D + P + ++ A+P + I + GH+ E+ E
Sbjct: 219 PQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGHLGFFERPE 278
Query: 296 EFVSIVARFL 305
+ + +F
Sbjct: 279 AVNTAMLKFF 288
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
Length = 344
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 246 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFL 305
+I P L+VT + D ++ ++ + IP I++CGH Q +K E I+ ++L
Sbjct: 279 KILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWL 338
Query: 306 Q 306
Sbjct: 339 D 339
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 246 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFL 305
+I P L+VT + D ++ ++ + IP I++CGH Q +K E I+ ++L
Sbjct: 264 KILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWL 323
Query: 306 Q 306
Sbjct: 324 D 324
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 240 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRA-IPGSTFEVIKNCGHVPQEEKVEEFV 298
+ L +I P L+V GD D++VP + S A + GST ++ H + ++
Sbjct: 205 FTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLN 264
Query: 299 SIVARFLQ 306
+ + F++
Sbjct: 265 ADLLAFIK 272
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 246 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFL 305
+I P L+VT + D ++ ++ + IP I++CGH Q +K E I+ ++L
Sbjct: 483 KILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWL 542
Query: 306 Q 306
Sbjct: 543 D 543
>pdb|4G5X|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
pdb|4G5X|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
pdb|4G9E|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
Complexed With N-butanoyl Homoserine
pdb|4G9E|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
Complexed With N-butanoyl Homoserine
Length = 279
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 246 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFE----VIKNCGHVPQEEKVEEFVSIV 301
E P+ +V G R P + +S+ G+ +E VI N GH P E EF + +
Sbjct: 206 EAQLPIAVVNG---RDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYL 262
Query: 302 ARFLQ 306
ARF++
Sbjct: 263 ARFIR 267
>pdb|4G8C|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant Complexed With N-hexanoyl Homoserine
pdb|4G8C|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant Complexed With N-hexanoyl Homoserine
pdb|4G9G|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant
pdb|4G9G|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant
Length = 279
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 246 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFE----VIKNCGHVPQEEKVEEFVSIV 301
E P+ +V G R P + +S+ G+ +E VI N GH P E EF + +
Sbjct: 206 EAQLPIAVVNG---RDGPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYL 262
Query: 302 ARFLQ 306
ARF++
Sbjct: 263 ARFIR 267
>pdb|4G8B|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant Complexed With N-hexanoyl Homoserine
Lactone
pdb|4G8B|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant Complexed With N-hexanoyl Homoserine
Lactone
pdb|4G8D|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant
pdb|4G8D|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant
Length = 279
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 246 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFE----VIKNCGHVPQEEKVEEFVSIV 301
E P+ +V G R P + +S+ G+ +E VI N GH P E EF + +
Sbjct: 206 EAQLPIAVVNG---RDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYL 262
Query: 302 ARFLQ 306
ARF++
Sbjct: 263 ARFIR 267
>pdb|4FWB|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 292
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
LH+ P L+ G I+P A RL+ ++P I H QE+ + S +AR
Sbjct: 226 LHQSPVPKLLFWGTPGFIIPPAEAARLAESLPNCKTVDIGPGLHFLQEDNPDLIGSEIAR 285
Query: 304 FL 305
+L
Sbjct: 286 WL 287
>pdb|3RK4|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31
pdb|3RLT|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 299
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
LH+ P L+ G I+P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGFIIPPAEAARLAESLPNCKTVDIGPGLHFLQEDNPDLIGSEIAR 288
Query: 304 FL 305
+L
Sbjct: 289 WL 290
>pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd)
From Rhodococcus Sp. Strain Rha1
Length = 285
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 233 ESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEE 292
ES + PP L + VL+ G DRIVP + L++ + + V+ CGH Q E
Sbjct: 212 ESLVIPP--ATLGRLPHDVLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQLE 269
Query: 293 K 293
+
Sbjct: 270 R 270
>pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053)
From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution
Length = 315
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 18/108 (16%)
Query: 215 KGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIV------PSWNAE 268
+G R V + +AL D P+ L + P L++ G+ D P+
Sbjct: 207 RGKGRESVAWNSALTYD--XIFTQPVVYELDRLQXPTLLLIGEKDNTAIGKDAAPAELKA 264
Query: 269 RL----------SRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306
RL +R IP +T + GH PQ + E F + LQ
Sbjct: 265 RLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEGLQ 312
>pdb|4FBM|A Chain A, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBM|B Chain B, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
Length = 293
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEV--IKNCGHVPQEEKVEEFV 298
L + CP LI+ D +VP N E + I + E+ ++N HV + +E +
Sbjct: 212 LPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELI 268
>pdb|4FBL|A Chain A, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|B Chain B, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|C Chain C, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|D Chain D, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
Length = 281
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEV--IKNCGHVPQEEKVEEFV 298
L + CP LI+ D +VP N E + I + E+ ++N HV + +E +
Sbjct: 214 LPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELI 270
>pdb|2V9Z|A Chain A, Structure Of The Rhodococcus Haloalkane Dehalogenase
Mutant With Enhanced Enantioselectivity
Length = 304
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 240 LHQSPVPKLLFWGTPGALIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 299
Query: 304 FL 305
+L
Sbjct: 300 WL 301
>pdb|3SK0|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant Dhaa12
Length = 311
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 240 LHQSPVPKLLFWGTPGALIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 299
Query: 304 FL 305
+L
Sbjct: 300 WL 301
>pdb|3FBW|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant C176y
Length = 299
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 304 FL 305
+L
Sbjct: 289 WL 290
>pdb|1CQW|A Chain A, Nai Cocrystallised With Haloalkane Dehalogenase From A
Rhodococcus Species
Length = 295
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 226 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 285
Query: 304 FL 305
+L
Sbjct: 286 WL 287
>pdb|3FWH|A Chain A, Structure Of Haloalkane Dehalogenase Mutant Dha15
(I135fC176Y) FROM Rhodococcus Rhodochrous
Length = 299
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 304 FL 305
+L
Sbjct: 289 WL 290
>pdb|3G9X|A Chain A, Structure Of Haloalkane Dehalogenase Dhaa14 Mutant I135f
From Rhodococcus Rhodochrous
Length = 299
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 304 FL 305
+L
Sbjct: 289 WL 290
>pdb|4F60|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (t148l, G171q, A172v, C176f)
Length = 299
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 304 FL 305
+L
Sbjct: 289 WL 290
>pdb|1BN6|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
pdb|1BN7|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
Length = 294
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 304 FL 305
+L
Sbjct: 289 WL 290
>pdb|4F5Z|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (l95v, A172v)
Length = 299
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 304 FL 305
+L
Sbjct: 289 WL 290
>pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120.
pdb|3QYJ|B Chain B, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120
Length = 291
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 246 EISCPVLIVTGDTDRIVPSWN--AERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 303
+ISCPVL++ G+ I ++ A RAI S + CGH EE EE +
Sbjct: 229 KISCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSL--PCGHFLPEEAPEETYQAIYN 286
Query: 304 FL 305
FL
Sbjct: 287 FL 288
>pdb|3LHK|A Chain A, Crystal Structure Of Putative Dna Binding Protein From
Methanocaldococcus Jannaschii.
pdb|3LHK|B Chain B, Crystal Structure Of Putative Dna Binding Protein From
Methanocaldococcus Jannaschii.
pdb|3LHK|C Chain C, Crystal Structure Of Putative Dna Binding Protein From
Methanocaldococcus Jannaschii.
pdb|3LHK|D Chain D, Crystal Structure Of Putative Dna Binding Protein From
Methanocaldococcus Jannaschii
Length = 154
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 276 GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFG 310
G+ +I PQEE VE+ ++IV+ F + +G
Sbjct: 94 GTEIVIINKKHKTPQEELVEDLITIVSHFAGKLYG 128
>pdb|4ETW|A Chain A, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
pdb|4ETW|C Chain C, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
Length = 264
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 26/70 (37%)
Query: 240 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVS 299
L + L +S P L + G D +VP L + P S + H P EF
Sbjct: 188 LRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCH 247
Query: 300 IVARFLQRAF 309
++ QR
Sbjct: 248 LLVALKQRVL 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,600,488
Number of Sequences: 62578
Number of extensions: 309853
Number of successful extensions: 737
Number of sequences better than 100.0: 61
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 703
Number of HSP's gapped (non-prelim): 64
length of query: 323
length of database: 14,973,337
effective HSP length: 99
effective length of query: 224
effective length of database: 8,778,115
effective search space: 1966297760
effective search space used: 1966297760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)